ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd27o17 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Z26322.1|HVALAAT H.vulgare mRNA for alanine aminotransferase Length = 1701 Score = 1146 bits (578), Expect = 0.0 Identities = 578/578 (100%) Strand = Plus / Minus Query: 125 caaaaccaagaacgcctacgaaaaccccatgagggttgtatgtaatcccacatgttgcac 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1607 caaaaccaagaacgcctacgaaaaccccatgagggttgtatgtaatcccacatgttgcac 1548 Query: 185 cagtttagtcacgatactctgacatgaacgcctcatggaacaccgtgaagcgggagatga 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1547 cagtttagtcacgatactctgacatgaacgcctcatggaacaccgtgaagcgggagatga 1488 Query: 245 ctgccgggatcttatcctcctgcggaaggatcgtgcacctgaagtgccatgtgccaggaa 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1487 ctgccgggatcttatcctcctgcggaaggatcgtgcacctgaagtgccatgtgccaggaa 1428 Query: 305 cctggccaaatcctgatccagggacaacgacgattccagtcgactcgaggagacgaagag 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1427 cctggccaaatcctgatccagggacaacgacgattccagtcgactcgaggagacgaagag 1368 Query: 365 catagaatgcatcaggtgctttgttagcagctttagcagcctcaattgccttctgtggca 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1367 catagaatgcatcaggtgctttgttagcagctttagcagcctcaattgccttctgtggca 1308 Query: 425 gacagatttgagggaacacgtacattgctccttcagcctcgttgcaagtaattccctcaa 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1307 gacagatttgagggaacacgtacattgctccttcagcctcgttgcaagtaattccctcaa 1248 Query: 485 gtttattgaatgcatgctccaatgccttcgcacgacgagctaaagatgcgaggattccat 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1247 gtttattgaatgcatgctccaatgccttcgcacgacgagctaaagatgcgaggattccat 1188 Query: 545 ctttttctgccttgtatgaagcgtatgattcatcactagcctttggtgggttcatgacaa 604 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1187 ctttttctgccttgtatgaagcgtatgattcatcactagcctttggtgggttcatgacaa 1128 Query: 605 gactagcaaggatctggccagtgatattggagcataggttcactgatgctattttgtaga 664 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1127 gactagcaaggatctggccagtgatattggagcataggttcactgatgctattttgtaga 1068 Query: 665 tctgctctcttactggagcactgaagccagtaatctca 702 |||||||||||||||||||||||||||||||||||||| Sbjct: 1067 tctgctctcttactggagcactgaagccagtaatctca 1030 Score = 105 bits (53), Expect = 2e-19 Identities = 53/53 (100%) Strand = Plus / Minus Query: 43 taaggatgacatggctttgctttattttgtctcatctagaggaggatgctgtc 95 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1692 taaggatgacatggctttgctttattttgtctcatctagaggaggatgctgtc 1640
>ref|NM_196284.1| Oryza sativa (japonica cultivar-group) putative alanine aminotransferase (OSJNBb0061I18.10), mRNA Length = 1455 Score = 505 bits (255), Expect = e-140 Identities = 429/487 (88%) Strand = Plus / Minus Query: 215 cctcatggaacaccgtgaagcgggagatgactgccgggatcttatcctcctgcggaagga 274 |||||||||| || ||||||||||||||| || |||||||| |||||||| || |||| Sbjct: 1429 cctcatggaatgccttgaagcgggagatgatcgcggggatcttctcctcctgtggcagga 1370 Query: 275 tcgtgcacctgaagtgccatgtgccaggaacctggccaaatcctgatccagggacaacga 334 | ||||| |||| |||||||||||||||||| ||||||||||| |||||||||||||| | Sbjct: 1369 ttgtgcatctgatgtgccatgtgccaggaacttggccaaatccagatccagggacaacaa 1310 Query: 335 cgattccagtcgactcgaggagacgaagagcatagaatgcatcaggtgctttgttagcag 394 | ||||| || | ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 1309 caattccggttgcctcgaggagacgaagggcatagaaagcatcaggtgctttgttagcag 1250 Query: 395 ctttagcagcctcaattgccttctgtggcagacagatttgagggaacacgtacattgctc 454 |||||||||| ||||||||||| |||||||||| | |||||||| | ||||||||||| Sbjct: 1249 ctttagcagcgtcaattgccttttgtggcagactaagctgagggaagaggtacattgctc 1190 Query: 455 cttcagcctcgttgcaagtaattccctcaagtttattgaatgcatgctccaatgccttcg 514 |||||| | |||||| |||||||||||||| | ||||| |||| |||||||||||| | Sbjct: 1189 cttcagttttgttgcatgtaattccctcaagactgttgaaagcattctccaatgcctttg 1130 Query: 515 cacgacgagctaaagatgcgaggattccatctttttctgccttgtatgaagcgtatgatt 574 |||| |||||||| ||| ||||||||||||||| ||||||||||||||||| |||||| Sbjct: 1129 cacggcgagctaatgattggaggattccatctttctctgccttgtatgaagcatatgatg 1070 Query: 575 catcactagcctttggtgggttcatgacaagactagcaaggatctggccagtgatattgg 634 |||| | |||||||||||| |||||||| || || ||||||||||||||||||||||||| Sbjct: 1069 catctccagcctttggtggattcatgacgaggctggcaaggatctggccagtgatattgg 1010 Query: 635 agcataggttcactgatgctattttgtagatctgctctcttactggagcactgaagccag 694 | |||| ||||||||| || | |||||||||||||||||| ||||||||||||||||||| Sbjct: 1009 aacataagttcactgacgccactttgtagatctgctctctaactggagcactgaagccag 950 Query: 695 taatctc 701 ||||||| Sbjct: 949 taatctc 943
>dbj|AB007405.1| Oryza sativa mRNA for alanine aminotransferase, complete cds Length = 1821 Score = 505 bits (255), Expect = e-140 Identities = 429/487 (88%) Strand = Plus / Minus Query: 215 cctcatggaacaccgtgaagcgggagatgactgccgggatcttatcctcctgcggaagga 274 |||||||||| || ||||||||||||||| || |||||||| |||||||| || |||| Sbjct: 1494 cctcatggaatgccttgaagcgggagatgatcgcggggatcttctcctcctgtggcagga 1435 Query: 275 tcgtgcacctgaagtgccatgtgccaggaacctggccaaatcctgatccagggacaacga 334 | ||||| |||| |||||||||||||||||| ||||||||||| |||||||||||||| | Sbjct: 1434 ttgtgcatctgatgtgccatgtgccaggaacttggccaaatccagatccagggacaacaa 1375 Query: 335 cgattccagtcgactcgaggagacgaagagcatagaatgcatcaggtgctttgttagcag 394 | ||||| || | ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 1374 caattccggttgcctcgaggagacgaagggcatagaaagcatcaggtgctttgttagcag 1315 Query: 395 ctttagcagcctcaattgccttctgtggcagacagatttgagggaacacgtacattgctc 454 |||||||||| ||||||||||| |||||||||| | |||||||| | ||||||||||| Sbjct: 1314 ctttagcagcgtcaattgccttttgtggcagactaagctgagggaagaggtacattgctc 1255 Query: 455 cttcagcctcgttgcaagtaattccctcaagtttattgaatgcatgctccaatgccttcg 514 |||||| | |||||| |||||||||||||| | ||||| |||| |||||||||||| | Sbjct: 1254 cttcagttttgttgcatgtaattccctcaagactgttgaaagcattctccaatgcctttg 1195 Query: 515 cacgacgagctaaagatgcgaggattccatctttttctgccttgtatgaagcgtatgatt 574 |||| |||||||| ||| ||||||||||||||| ||||||||||||||||| |||||| Sbjct: 1194 cacggcgagctaatgattggaggattccatctttctctgccttgtatgaagcatatgatg 1135 Query: 575 catcactagcctttggtgggttcatgacaagactagcaaggatctggccagtgatattgg 634 |||| | |||||||||||| |||||||| || || ||||||||||||||||||||||||| Sbjct: 1134 catctccagcctttggtggattcatgacgaggctggcaaggatctggccagtgatattgg 1075 Query: 635 agcataggttcactgatgctattttgtagatctgctctcttactggagcactgaagccag 694 | |||| ||||||||| || | |||||||||||||||||| ||||||||||||||||||| Sbjct: 1074 aacataagttcactgacgccactttgtagatctgctctctaactggagcactgaagccag 1015 Query: 695 taatctc 701 ||||||| Sbjct: 1014 taatctc 1008
>emb|X69421.1|PMPALAAT2 P. miliaceum mRNA for alanine aminotransferase Length = 1869 Score = 502 bits (253), Expect = e-139 Identities = 448/513 (87%) Strand = Plus / Minus Query: 189 ttagtcacgatactctgacatgaacgcctcatggaacaccgtgaagcgggagatgactgc 248 |||||| || ||||| | ||||||||||||||||||| || ||||||||| ||| || || Sbjct: 1543 ttagtcgcggtactcagccatgaacgcctcatggaacgccttgaagcgggtgatcacggc 1484 Query: 249 cgggatcttatcctcctgcggaaggatcgtgcacctgaagtgccatgtgccaggaacctg 308 |||||||| || |||||||| |||||||||||||||| |||||||| || ||||| || Sbjct: 1483 ggggatcttgtcttcctgcggcaggatcgtgcacctgatatgccatgttccgggaacttg 1424 Query: 309 gccaaatcctgatccagggacaacgacgattccagtcgactcgaggagacgaagagcata 368 |||||| || ||||||||||| || || |||||||| || || |||||||| |||||||| Sbjct: 1423 gccaaacccggatccagggaccacaacaattccagttgattcaaggagacggagagcata 1364 Query: 369 gaatgcatcaggtgctttgttagcagctttagcagcctcaattgccttctgtggcagaca 428 |||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||| Sbjct: 1363 gaatgcatcaggtgctttattagctgctttagcagcctcaattgccttctttggcagatg 1304 Query: 429 gatttgagggaacacgtacattgctccttcagcctcgttgcaagtaattccctcaagttt 488 || |||||||| | |||||||||||||||||||| ||| || | |||||||||||| || Sbjct: 1303 aatctgagggaaaaggtacattgctccttcagccttgttacacgaaattccctcaagatt 1244 Query: 489 attgaatgcatgctccaatgccttcgcacgacgagctaaagatgcgaggattccatcttt 548 |||||||||| |||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 1243 gttgaatgcatcctccaatgcctttgcacgacgagctaaagattgaaggattccatcttt 1184 Query: 549 ttctgccttgtatgaagcgtatgattcatcactagcctttggtgggttcatgacaagact 608 ||||||||||| | ||| |||||||| || | |||||||||| ||||||||||| || Sbjct: 1183 ctctgccttgtaggcagcatatgattcgtccccgacctttggtggattcatgacaaggct 1124 Query: 609 agcaaggatctggccagtgatattggagcataggttcactgatgctattttgtagatctg 668 |||||||| || ||||||||||||||||||| ||||||||| ||||| ||||||||||| Sbjct: 1123 ggcaaggatttgaccagtgatattggagcataagttcactgaagctatcttgtagatctg 1064 Query: 669 ctctcttactggagcactgaagccagtaatctc 701 ||||||||| ||||||||||||||||||||||| Sbjct: 1063 ctctcttacgggagcactgaagccagtaatctc 1031
>gb|BT016480.1| Zea mays clone Contig313 mRNA sequence Length = 768 Score = 478 bits (241), Expect = e-131 Identities = 448/517 (86%) Strand = Plus / Plus Query: 185 cagtttagtcacgatactctgacatgaacgcctcatggaacaccgtgaagcgggagatga 244 |||||||||| || || || | || ||||||||||||||| || |||||||| ||| | Sbjct: 186 cagtttagtcgcggtattcggccaagaacgcctcatggaaagccctgaagcggctgatca 245 Query: 245 ctgccgggatcttatcctcctgcggaaggatcgtgcacctgaagtgccatgtgccaggaa 304 | || |||||||| || |||||||| ||||||||||| |||| ||||||||| ||||||| Sbjct: 246 ccgcggggatcttgtcttcctgcggcaggatcgtgcatctgatgtgccatgttccaggaa 305 Query: 305 cctggccaaatcctgatccagggacaacgacgattccagtcgactcgaggagacgaagag 364 | || |||||||| ||||||||||| ||||||||||||||||| || |||||||| |||| Sbjct: 306 cttgaccaaatccagatccagggaccacgacgattccagtcgattcaaggagacggagag 365 Query: 365 catagaatgcatcaggtgctttgttagcagctttagcagcctcaattgccttctgtggca 424 | ||||| || ||||| ||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 366 cgtagaaagcgtcaggcgctttcttagcagctttagcagcctcgattgccttctgtggca 425 Query: 425 gacagatttgagggaacacgtacattgctccttcagcctcgttgcaagtaattccctcaa 484 || || |||||||| | |||||||||||||| |||| ||| || | || |||||||| Sbjct: 426 gaagaatctgagggaaaagatacattgctccttcggccttgttacatgaaaatccctcaa 485 Query: 485 gtttattgaatgcatgctccaatgccttcgcacgacgagctaaagatgcgaggattccat 544 | || |||||||||| |||||| ||||| ||||||||||||||||| | |||||||||| Sbjct: 486 gcttgttgaatgcatcctccaacgcctttgcacgacgagctaaagactcaaggattccat 545 Query: 545 ctttttctgccttgtatgaagcgtatgattcatcactagcctttggtgggttcatgacaa 604 |||| ||||||||||| ||||| |||||||| || | | |||||||||| |||||||| | Sbjct: 546 ctttctctgccttgtaggaagcatatgattcgtctccaacctttggtggattcatgacga 605 Query: 605 gactagcaaggatctggccagtgatattggagcataggttcactgatgctattttgtaga 664 | || |||||||| || ||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 606 ggctcgcaaggatttgaccagtgatattggagcataggttcactgaagctatcttgtaga 665 Query: 665 tctgctctcttactggagcactgaagccagtaatctc 701 ||||||||||||||||||||||||||||||||||||| Sbjct: 666 tctgctctcttactggagcactgaagccagtaatctc 702
>gb|AY103725.1| Zea mays PCO103969 mRNA sequence Length = 1867 Score = 462 bits (233), Expect = e-127 Identities = 446/517 (86%) Strand = Plus / Minus Query: 185 cagtttagtcacgatactctgacatgaacgcctcatggaacaccgtgaagcgggagatga 244 ||||| ||||||| ||||| | |||||||||||||||||| || ||||||||| ||| | Sbjct: 1679 cagttcagtcacggtactcagccatgaacgcctcatggaaagccttgaagcgggtgatca 1620 Query: 245 ctgccgggatcttatcctcctgcggaaggatcgtgcacctgaagtgccatgtgccaggaa 304 | || ||||| ||||| |||||||| ||||||||||| |||| ||||||||| ||||||| Sbjct: 1619 ccgcggggattttatcttcctgcggcaggatcgtgcatctgacgtgccatgttccaggaa 1560 Query: 305 cctggccaaatcctgatccagggacaacgacgattccagtcgactcgaggagacgaagag 364 | ||||||||||| |||||||| || || || |||||||| || || |||||||| || | Sbjct: 1559 cttggccaaatccagatccaggaaccacaacaattccagttgattcaaggagacggagcg 1500 Query: 365 catagaatgcatcaggtgctttgttagcagctttagcagcctcaattgccttctgtggca 424 |||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||| Sbjct: 1499 catagaatgcatcaggtgctttcttggcagctttagcagcctcaattgccttatgtggca 1440 Query: 425 gacagatttgagggaacacgtacattgctccttcagcctcgttgcaagtaattccctcaa 484 || ||| |||||||| | |||||||||||||||||||| ||| || | || |||||||| Sbjct: 1439 gatggatctgagggaaaaggtacattgctccttcagccttgttacatgaaaatccctcaa 1380 Query: 485 gtttattgaatgcatgctccaatgccttcgcacgacgagctaaagatgcgaggattccat 544 | | |||||||||| |||| |||||| ||||| ||||||||||| |||||||||| Sbjct: 1379 gcgtgttgaatgcatcttccagtgcctttgcacggcgagctaaagactgaaggattccat 1320 Query: 545 ctttttctgccttgtatgaagcgtatgattcatcactagcctttggtgggttcatgacaa 604 |||| ||||||||||| ||||| |||||||| || | | |||||||||| |||||||| | Sbjct: 1319 ctttctctgccttgtaggaagcatatgattcgtccccaacctttggtggattcatgacga 1260 Query: 605 gactagcaaggatctggccagtgatattggagcataggttcactgatgctattttgtaga 664 | || |||||||| || ||||||||||||||||| ||||||||||| |||| ||||||| Sbjct: 1259 ggctcgcaaggatttgaccagtgatattggagcacaggttcactgaagctaccttgtaga 1200 Query: 665 tctgctctcttactggagcactgaagccagtaatctc 701 ||||||||||||| ||||||||||||||||||||||| Sbjct: 1199 tctgctctcttaccggagcactgaagccagtaatctc 1163
>dbj|AK059063.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-G05, full insert sequence Length = 833 Score = 428 bits (216), Expect = e-116 Identities = 381/436 (87%) Strand = Plus / Minus Query: 215 cctcatggaacaccgtgaagcgggagatgactgccgggatcttatcctcctgcggaagga 274 |||||||||| || ||||||||||||||| || |||||||| |||||||| || |||| Sbjct: 548 cctcatggaatgccttgaagcgggagatgatcgcggggatcttctcctcctgtggcagga 489 Query: 275 tcgtgcacctgaagtgccatgtgccaggaacctggccaaatcctgatccagggacaacga 334 | ||||| |||| |||||||||||||||||| ||||||||||| |||||||||||||| | Sbjct: 488 ttgtgcatctgatgtgccatgtgccaggaacttggccaaatccagatccagggacaacaa 429 Query: 335 cgattccagtcgactcgaggagacgaagagcatagaatgcatcaggtgctttgttagcag 394 | ||||| || | ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 428 caattccggttgcctcgaggagacgaagggcatagaaagcatcaggtgctttgttagcag 369 Query: 395 ctttagcagcctcaattgccttctgtggcagacagatttgagggaacacgtacattgctc 454 |||||||||| ||||||||||| |||||||||| | |||||||| | ||||||||||| Sbjct: 368 ctttagcagcgtcaattgccttttgtggcagactaagctgagggaagaggtacattgctc 309 Query: 455 cttcagcctcgttgcaagtaattccctcaagtttattgaatgcatgctccaatgccttcg 514 |||||| | |||||| |||||||||||||| | ||||| |||| |||||||||||| | Sbjct: 308 cttcagttttgttgcatgtaattccctcaagactgttgaaagcattctccaatgcctttg 249 Query: 515 cacgacgagctaaagatgcgaggattccatctttttctgccttgtatgaagcgtatgatt 574 |||| |||||||| ||| | ||||||||||||| ||||||||||||||||| |||||| Sbjct: 248 cacggcgagctaatgattgggggattccatctttctctgccttgtatgaagcatatgatg 189 Query: 575 catcactagcctttggtgggttcatgacaagactagcaaggatctggccagtgatattgg 634 |||| | |||||||||||| |||||||| || || ||||||||||||||||||||||||| Sbjct: 188 catctccagcctttggtggattcatgacgaggctggcaaggatctggccagtgatattgg 129 Query: 635 agcataggttcactga 650 | |||| ||||||||| Sbjct: 128 aacataagttcactga 113
>gb|AC079936.7| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBb0061I18, complete sequence Length = 143163 Score = 208 bits (105), Expect = 2e-50 Identities = 180/205 (87%) Strand = Plus / Plus Query: 307 tggccaaatcctgatccagggacaacgacgattccagtcgactcgaggagacgaagagca 366 ||||||||||| |||||||||||||| || ||||| || | ||||||||||||||| ||| Sbjct: 47813 tggccaaatccagatccagggacaacaacaattccggttgcctcgaggagacgaagggca 47872 Query: 367 tagaatgcatcaggtgctttgttagcagctttagcagcctcaattgccttctgtggcaga 426 ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 47873 tagaaagcatcaggtgctttgttagcagctttagcagcgtcaattgccttttgtggcaga 47932 Query: 427 cagatttgagggaacacgtacattgctccttcagcctcgttgcaagtaattccctcaagt 486 | | |||||||| | ||||||||||||||||| | |||||| |||||||||||||| Sbjct: 47933 ctaagctgagggaagaggtacattgctccttcagttttgttgcatgtaattccctcaaga 47992 Query: 487 ttattgaatgcatgctccaatgcct 511 | ||||| |||| ||||||||||| Sbjct: 47993 ctgttgaaagcattctccaatgcct 48017 Score = 155 bits (78), Expect = 2e-34 Identities = 108/118 (91%) Strand = Plus / Plus Query: 584 cctttggtgggttcatgacaagactagcaaggatctggccagtgatattggagcataggt 643 |||||||||| |||||||| || || |||||||||||||||||||||||||| |||| || Sbjct: 48252 cctttggtggattcatgacgaggctggcaaggatctggccagtgatattggaacataagt 48311 Query: 644 tcactgatgctattttgtagatctgctctcttactggagcactgaagccagtaatctc 701 ||||||| || | |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 48312 tcactgacgccactttgtagatctgctctctaactggagcactgaagccagtaatctc 48369 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 215 cctcatggaacaccgtgaagcgggagatgactgccgggatcttatcctcctgcggaagga 274 |||||||||| || ||||||||||||||| || |||||||| |||||||| || |||| Sbjct: 46980 cctcatggaatgccttgaagcgggagatgatcgcggggatcttctcctcctgtggcagga 47039 Query: 275 tcgtgcacctgaagtgccatgtgccaggaacct 307 | ||||| |||| |||||||||||||||||||| Sbjct: 47040 ttgtgcatctgatgtgccatgtgccaggaacct 47072 Score = 75.8 bits (38), Expect = 2e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 509 ccttcgcacgacgagctaaagatgcgaggattccatctttttctgccttgtatgaagcgt 568 |||| ||||| |||||||| ||| ||||||||||||||| ||||||||||||||||| | Sbjct: 48096 cctttgcacggcgagctaatgattggaggattccatctttctctgccttgtatgaagcat 48155 Query: 569 atgattcatc 578 ||||| |||| Sbjct: 48156 atgatgcatc 48165 Score = 48.1 bits (24), Expect = 0.039 Identities = 48/56 (85%) Strand = Plus / Plus Query: 584 cctttggtgggttcatgacaagactagcaaggatctggccagtgatattggagcat 639 ||||||||||||||||||| || || |||||||||||||| || ||||||||| Sbjct: 39193 cctttggtgggttcatgactaggctcataaggatctggccagatatgttggagcat 39248
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 208 bits (105), Expect = 2e-50 Identities = 180/205 (87%) Strand = Plus / Minus Query: 307 tggccaaatcctgatccagggacaacgacgattccagtcgactcgaggagacgaagagca 366 ||||||||||| |||||||||||||| || ||||| || | ||||||||||||||| ||| Sbjct: 12456362 tggccaaatccagatccagggacaacaacaattccggttgcctcgaggagacgaagggca 12456303 Query: 367 tagaatgcatcaggtgctttgttagcagctttagcagcctcaattgccttctgtggcaga 426 ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 12456302 tagaaagcatcaggtgctttgttagcagctttagcagcgtcaattgccttttgtggcaga 12456243 Query: 427 cagatttgagggaacacgtacattgctccttcagcctcgttgcaagtaattccctcaagt 486 | | |||||||| | ||||||||||||||||| | |||||| |||||||||||||| Sbjct: 12456242 ctaagctgagggaagaggtacattgctccttcagttttgttgcatgtaattccctcaaga 12456183 Query: 487 ttattgaatgcatgctccaatgcct 511 | ||||| |||| ||||||||||| Sbjct: 12456182 ctgttgaaagcattctccaatgcct 12456158 Score = 155 bits (78), Expect = 2e-34 Identities = 108/118 (91%) Strand = Plus / Minus Query: 584 cctttggtgggttcatgacaagactagcaaggatctggccagtgatattggagcataggt 643 |||||||||| |||||||| || || |||||||||||||||||||||||||| |||| || Sbjct: 12455923 cctttggtggattcatgacgaggctggcaaggatctggccagtgatattggaacataagt 12455864 Query: 644 tcactgatgctattttgtagatctgctctcttactggagcactgaagccagtaatctc 701 ||||||| || | |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 12455863 tcactgacgccactttgtagatctgctctctaactggagcactgaagccagtaatctc 12455806 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Minus Query: 215 cctcatggaacaccgtgaagcgggagatgactgccgggatcttatcctcctgcggaagga 274 |||||||||| || ||||||||||||||| || |||||||| |||||||| || |||| Sbjct: 12457195 cctcatggaatgccttgaagcgggagatgatcgcggggatcttctcctcctgtggcagga 12457136 Query: 275 tcgtgcacctgaagtgccatgtgccaggaacct 307 | ||||| |||| |||||||||||||||||||| Sbjct: 12457135 ttgtgcatctgatgtgccatgtgccaggaacct 12457103 Score = 75.8 bits (38), Expect = 2e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 509 ccttcgcacgacgagctaaagatgcgaggattccatctttttctgccttgtatgaagcgt 568 |||| ||||| |||||||| ||| ||||||||||||||| ||||||||||||||||| | Sbjct: 12456079 cctttgcacggcgagctaatgattggaggattccatctttctctgccttgtatgaagcat 12456020 Query: 569 atgattcatc 578 ||||| |||| Sbjct: 12456019 atgatgcatc 12456010 Score = 48.1 bits (24), Expect = 0.039 Identities = 48/56 (85%) Strand = Plus / Minus Query: 584 cctttggtgggttcatgacaagactagcaaggatctggccagtgatattggagcat 639 ||||||||||||||||||| || || |||||||||||||| || ||||||||| Sbjct: 12464982 cctttggtgggttcatgactaggctcataaggatctggccagatatgttggagcat 12464927
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 208 bits (105), Expect = 2e-50 Identities = 180/205 (87%) Strand = Plus / Minus Query: 307 tggccaaatcctgatccagggacaacgacgattccagtcgactcgaggagacgaagagca 366 ||||||||||| |||||||||||||| || ||||| || | ||||||||||||||| ||| Sbjct: 12463702 tggccaaatccagatccagggacaacaacaattccggttgcctcgaggagacgaagggca 12463643 Query: 367 tagaatgcatcaggtgctttgttagcagctttagcagcctcaattgccttctgtggcaga 426 ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 12463642 tagaaagcatcaggtgctttgttagcagctttagcagcgtcaattgccttttgtggcaga 12463583 Query: 427 cagatttgagggaacacgtacattgctccttcagcctcgttgcaagtaattccctcaagt 486 | | |||||||| | ||||||||||||||||| | |||||| |||||||||||||| Sbjct: 12463582 ctaagctgagggaagaggtacattgctccttcagttttgttgcatgtaattccctcaaga 12463523 Query: 487 ttattgaatgcatgctccaatgcct 511 | ||||| |||| ||||||||||| Sbjct: 12463522 ctgttgaaagcattctccaatgcct 12463498 Score = 155 bits (78), Expect = 2e-34 Identities = 108/118 (91%) Strand = Plus / Minus Query: 584 cctttggtgggttcatgacaagactagcaaggatctggccagtgatattggagcataggt 643 |||||||||| |||||||| || || |||||||||||||||||||||||||| |||| || Sbjct: 12463263 cctttggtggattcatgacgaggctggcaaggatctggccagtgatattggaacataagt 12463204 Query: 644 tcactgatgctattttgtagatctgctctcttactggagcactgaagccagtaatctc 701 ||||||| || | |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 12463203 tcactgacgccactttgtagatctgctctctaactggagcactgaagccagtaatctc 12463146 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Minus Query: 215 cctcatggaacaccgtgaagcgggagatgactgccgggatcttatcctcctgcggaagga 274 |||||||||| || ||||||||||||||| || |||||||| |||||||| || |||| Sbjct: 12464535 cctcatggaatgccttgaagcgggagatgatcgcggggatcttctcctcctgtggcagga 12464476 Query: 275 tcgtgcacctgaagtgccatgtgccaggaacct 307 | ||||| |||| |||||||||||||||||||| Sbjct: 12464475 ttgtgcatctgatgtgccatgtgccaggaacct 12464443 Score = 75.8 bits (38), Expect = 2e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 509 ccttcgcacgacgagctaaagatgcgaggattccatctttttctgccttgtatgaagcgt 568 |||| ||||| |||||||| ||| ||||||||||||||| ||||||||||||||||| | Sbjct: 12463419 cctttgcacggcgagctaatgattggaggattccatctttctctgccttgtatgaagcat 12463360 Query: 569 atgattcatc 578 ||||| |||| Sbjct: 12463359 atgatgcatc 12463350 Score = 48.1 bits (24), Expect = 0.039 Identities = 48/56 (85%) Strand = Plus / Minus Query: 584 cctttggtgggttcatgacaagactagcaaggatctggccagtgatattggagcat 639 ||||||||||||||||||| || || |||||||||||||| || ||||||||| Sbjct: 12472322 cctttggtgggttcatgactaggctcataaggatctggccagatatgttggagcat 12472267
>dbj|AB007404.1| Oryza sativa gene for alanine aminotransferase, complete cds Length = 9289 Score = 208 bits (105), Expect = 2e-50 Identities = 180/205 (87%) Strand = Plus / Minus Query: 307 tggccaaatcctgatccagggacaacgacgattccagtcgactcgaggagacgaagagca 366 ||||||||||| |||||||||||||| || ||||| || | ||||||||||||||| ||| Sbjct: 6643 tggccaaatccagatccagggacaacaacaattccggttgcctcgaggagacgaagggca 6584 Query: 367 tagaatgcatcaggtgctttgttagcagctttagcagcctcaattgccttctgtggcaga 426 ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 6583 tagaaagcatcaggtgctttgttagcagctttagcagcgtcaattgccttttgtggcaga 6524 Query: 427 cagatttgagggaacacgtacattgctccttcagcctcgttgcaagtaattccctcaagt 486 | | |||||||| | ||||||||||||||||| | |||||| |||||||||||||| Sbjct: 6523 ctaagctgagggaagaggtacattgctccttcagttttgttgcatgtaattccctcaaga 6464 Query: 487 ttattgaatgcatgctccaatgcct 511 | ||||| |||| ||||||||||| Sbjct: 6463 ctgttgaaagcattctccaatgcct 6439 Score = 155 bits (78), Expect = 2e-34 Identities = 108/118 (91%) Strand = Plus / Minus Query: 584 cctttggtgggttcatgacaagactagcaaggatctggccagtgatattggagcataggt 643 |||||||||| |||||||| || || |||||||||||||||||||||||||| |||| || Sbjct: 6204 cctttggtggattcatgacgaggctggcaaggatctggccagtgatattggaacataagt 6145 Query: 644 tcactgatgctattttgtagatctgctctcttactggagcactgaagccagtaatctc 701 ||||||| || | |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 6144 tcactgacgccactttgtagatctgctctctaactggagcactgaagccagtaatctc 6087 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Minus Query: 215 cctcatggaacaccgtgaagcgggagatgactgccgggatcttatcctcctgcggaagga 274 |||||||||| || ||||||||||||||| || |||||||| |||||||| || |||| Sbjct: 7476 cctcatggaatgccttgaagcgggagatgatcgcggggatcttctcctcctgtggcagga 7417 Query: 275 tcgtgcacctgaagtgccatgtgccaggaacct 307 | ||||| |||| |||||||||||||||||||| Sbjct: 7416 ttgtgcatctgatgtgccatgtgccaggaacct 7384 Score = 75.8 bits (38), Expect = 2e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 509 ccttcgcacgacgagctaaagatgcgaggattccatctttttctgccttgtatgaagcgt 568 |||| ||||| |||||||| ||| ||||||||||||||| ||||||||||||||||| | Sbjct: 6360 cctttgcacggcgagctaatgattggaggattccatctttctctgccttgtatgaagcat 6301 Query: 569 atgattcatc 578 ||||| |||| Sbjct: 6300 atgatgcatc 6291
>gb|AF055898.1|AF055898 Zea mays alanine aminotransferase (alt) gene, complete cds Length = 6176 Score = 170 bits (86), Expect = 4e-39 Identities = 173/202 (85%) Strand = Plus / Minus Query: 310 ccaaatcctgatccagggacaacgacgattccagtcgactcgaggagacgaagagcatag 369 |||||||| ||||||||||| |||||||||||||| || || |||||||| ||||| ||| Sbjct: 5394 ccaaatccagatccagggaccacgacgattccagttgattcaaggagacggagagcgtag 5335 Query: 370 aatgcatcaggtgctttgttagcagctttagcagcctcaattgccttctgtggcagacag 429 || || ||||| ||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 5334 aaagcgtcaggcgctttcttagcagctttagcagcctcgattgccttctgtggcagatga 5275 Query: 430 atttgagggaacacgtacattgctccttcagcctcgttgcaagtaattccctcaagttta 489 || |||||||| | |||||||||||||| |||| ||| || | || ||||||||| || Sbjct: 5274 atctgagggaaaagatacattgctccttcggccttgttacatgaaaatccctcaagcttg 5215 Query: 490 ttgaatgcatgctccaatgcct 511 |||||||||| |||||| |||| Sbjct: 5214 ttgaatgcatcctccaacgcct 5193 Score = 155 bits (78), Expect = 2e-34 Identities = 108/118 (91%) Strand = Plus / Minus Query: 584 cctttggtgggttcatgacaagactagcaaggatctggccagtgatattggagcataggt 643 |||||||||| |||||||| || || |||||||| || ||||||||||||||||| | || Sbjct: 4950 cctttggtggattcatgacgaggctcgcaaggatttgaccagtgatattggagcacaagt 4891 Query: 644 tcactgatgctattttgtagatctgctctcttactggagcactgaagccagtaatctc 701 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4890 tcactgaagctatcttgtagatctgctctcttactggagcactgaagccagtaatctc 4833 Score = 95.6 bits (48), Expect = 2e-16 Identities = 105/124 (84%) Strand = Plus / Minus Query: 185 cagtttagtcacgatactctgacatgaacgcctcatggaacaccgtgaagcgggagatga 244 |||||||||| || ||||| | || ||||||||||||||| || |||||||| ||| | Sbjct: 5709 cagtttagtcgcggtactcggccaagaacgcctcatggaaagccctgaagcggctgatca 5650 Query: 245 ctgccgggatcttatcctcctgcggaaggatcgtgcacctgaagtgccatgtgccaggaa 304 | || |||||||| || |||||||| ||||||||||| |||| ||||||||| ||||||| Sbjct: 5649 ccgcggggatcttgtcttcctgcggcaggatcgtgcatctgatgtgccatgttccaggaa 5590 Query: 305 cctg 308 |||| Sbjct: 5589 cctg 5586 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 514 gcacgacgagctaaagatgcgaggattccatctttttctgccttgtatgaagcgtatgat 573 ||||||||||||||||| | ||||||||||| || ||||||||||| ||||| |||||| Sbjct: 5110 gcacgacgagctaaagactcaaggattccatccttctctgccttgtaggaagcatatgat 5051 Query: 574 tc 575 || Sbjct: 5050 tc 5049
>ref|XM_470564.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1527 Score = 89.7 bits (45), Expect = 1e-14 Identities = 144/177 (81%) Strand = Plus / Minus Query: 355 agacgaagagcatagaatgcatcaggtgctttgttagcagctttagcagcctcaattgcc 414 ||||| ||||| |||||| |||||||||||||||| |||| | ||||||||||||||| Sbjct: 1319 agacgtagagcgtagaatacatcaggtgctttgttgacagccctggcagcctcaattgcc 1260 Query: 415 ttctgtggcagacagatttgagggaacacgtacattgctccttcagcctcgttgcaagta 474 |||||||| ||| | || | ||||||| ||||| || ||||| | || |||||| ||| Sbjct: 1259 ttctgtggtagataaatccgtgggaacagatacatcgccccttccgtcttgttgcatgta 1200 Query: 475 attccctcaagtttattgaatgcatgctccaatgccttcgcacgacgagctaaagat 531 ||||| |||| | || |||||| ||||| |||||| |||||||||| ||||||| Sbjct: 1199 attccatcaatactgttaaatgcagactccattgcctttgcacgacgagataaagat 1143 Score = 60.0 bits (30), Expect = 1e-05 Identities = 72/86 (83%) Strand = Plus / Minus Query: 610 gcaaggatctggccagtgatattggagcataggttcactgatgctattttgtagatctgc 669 |||||||||||||| |||||||| || || | ||| || ||||| |||||||||| || Sbjct: 1064 gcaaggatctggccggtgatatttgaacacaagttaacagatgcaattttgtagagttgt 1005 Query: 670 tctcttactggagcactgaagccagt 695 ||||| ||||||| ||||||||||| Sbjct: 1004 tctctaactggagtgctgaagccagt 979 Score = 48.1 bits (24), Expect = 0.039 Identities = 66/80 (82%) Strand = Plus / Minus Query: 217 tcatggaacaccgtgaagcgggagatgactgccgggatcttatcctcctgcggaaggatc 276 |||||||| || ||||||||||||| | | || ||||| ||||||||||| |||||| Sbjct: 1527 tcatggaattccctgaagcgggagatcatcgaaggtatcttctcctcctgcggcaggatc 1468 Query: 277 gtgcacctgaagtgccatgt 296 ||||| || | ||||||||| Sbjct: 1467 gtgcatctcacgtgccatgt 1448
>gb|BT017492.1| Zea mays clone EL01N0413D07.c mRNA sequence Length = 1040 Score = 87.7 bits (44), Expect = 5e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 253 atcttatcctcctgcggaaggatcgtgcacctgaagtgccatgtgccaggaacctggcca 312 ||||| ||||||||||| || |||||||||||||||||||| || ||||| ||||| ||| Sbjct: 661 atcttgtcctcctgcggcagtatcgtgcacctgaagtgccacgttccagggacctgtcca 602 Query: 313 aatcctgatccagggacaacgacgattccagt 344 || || || || ||||| |||||||||||||| Sbjct: 601 aacccagaaccggggacgacgacgattccagt 570 Score = 61.9 bits (31), Expect = 3e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 571 gattcatcactagcctttggtgggttcatgacaagactagcaaggatctggccagtgata 630 |||||||| | |||||||||||||||||| ||||| |||||||| || || || | | | Sbjct: 343 gattcatccccagcctttggtgggttcattacaaggctagcaagaatttgccccgaaaca 284 Query: 631 ttggagcataggttcactgatgc 653 |||||||| ||||| |||||||| Sbjct: 283 ttggagcacaggtttactgatgc 261
>gb|AY107464.1| Zea mays PCO113489 mRNA sequence Length = 980 Score = 87.7 bits (44), Expect = 5e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 253 atcttatcctcctgcggaaggatcgtgcacctgaagtgccatgtgccaggaacctggcca 312 ||||| ||||||||||| || |||||||||||||||||||| || ||||| ||||| ||| Sbjct: 535 atcttgtcctcctgcggcagtatcgtgcacctgaagtgccacgttccagggacctgtcca 476 Query: 313 aatcctgatccagggacaacgacgattccagt 344 || || || || ||||| |||||||||||||| Sbjct: 475 aacccagaaccggggacgacgacgattccagt 444 Score = 61.9 bits (31), Expect = 3e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 571 gattcatcactagcctttggtgggttcatgacaagactagcaaggatctggccagtgata 630 |||||||| | |||||||||||||||||| ||||| |||||||| || || || | | | Sbjct: 217 gattcatccccagcctttggtgggttcattacaaggctagcaagaatttgccccgaaaca 158 Query: 631 ttggagcataggttcactgatgc 653 |||||||| ||||| |||||||| Sbjct: 157 ttggagcacaggtttactgatgc 135
>ref|NM_101591.4| Arabidopsis thaliana ALAAT1 (ALANINE AMINOTRANSFERAS); 1-aminocyclopropane-1-carboxylate synthase/ alanine transaminase/ transferase, transferring n> AT1G17290 (ALAAT1) mRNA, complete cds Length = 2055 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Minus Query: 253 atcttatcctcctgcggaaggatcgtgcacctgaagtgccatgtgccaggaacctggcca 312 ||||||||||| || ||||| || ||||||||||| |||||||| ||||| ||||| | | Sbjct: 1684 atcttatcctcttggggaagtatagtgcacctgaaatgccatgttccaggtacctgtcta 1625 Query: 313 aatcctgatccagggacaacgacgattccagt 344 || || || |||||||||||||| |||||||| Sbjct: 1624 aagccagaaccagggacaacgactattccagt 1593 Score = 56.0 bits (28), Expect = 2e-04 Identities = 121/152 (79%) Strand = Plus / Minus Query: 526 aaagatgcgaggattccatctttttctgccttgtatgaagcgtatgattcatcactagcc 585 ||||||| ||| |||||||| || ||||| ||||||| | || || || |||| || | Sbjct: 1411 aaagatgagagaattccatccttctctgctatgtatgattcataggagtcgtcaccaggc 1352 Query: 586 tttggtgggttcatgacaagactagcaaggatctggccagtgatattggagcataggttc 645 || |||||| |||||| || |||||||| || || |||| ||| ||||| || || ||| Sbjct: 1351 ttgggtgggctcatgatgaggctagcaagaatttgaccagagatgttggaacaaagattc 1292 Query: 646 actgatgctattttgtagatctgctctcttac 677 || || || |||||||| |||||||||||||| Sbjct: 1291 acagaagccattttgtatatctgctctcttac 1260
>gb|BT014732.1| Arabidopsis thaliana At1g17290.1 mRNA sequence Length = 1629 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Minus Query: 253 atcttatcctcctgcggaaggatcgtgcacctgaagtgccatgtgccaggaacctggcca 312 ||||||||||| || ||||| || ||||||||||| |||||||| ||||| ||||| | | Sbjct: 1565 atcttatcctcttggggaagtatagtgcacctgaaatgccatgttccaggtacctgtcta 1506 Query: 313 aatcctgatccagggacaacgacgattccagt 344 || || || |||||||||||||| |||||||| Sbjct: 1505 aagccagaaccagggacaacgactattccagt 1474 Score = 56.0 bits (28), Expect = 2e-04 Identities = 121/152 (79%) Strand = Plus / Minus Query: 526 aaagatgcgaggattccatctttttctgccttgtatgaagcgtatgattcatcactagcc 585 ||||||| ||| |||||||| || ||||| ||||||| | || || || |||| || | Sbjct: 1292 aaagatgagagaattccatccttctctgctatgtatgattcataggagtcgtcaccaggc 1233 Query: 586 tttggtgggttcatgacaagactagcaaggatctggccagtgatattggagcataggttc 645 || |||||| |||||| || |||||||| || || |||| ||| ||||| || || ||| Sbjct: 1232 ttgggtgggctcatgatgaggctagcaagaatttgaccagagatgttggaacaaagattc 1173 Query: 646 actgatgctattttgtagatctgctctcttac 677 || || || |||||||| |||||||||||||| Sbjct: 1172 acagaagccattttgtatatctgctctcttac 1141
>gb|AY039970.1| Arabidopsis thaliana putative alanine aminotransferase (At1g17290) mRNA, partial cds Length = 1929 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Minus Query: 253 atcttatcctcctgcggaaggatcgtgcacctgaagtgccatgtgccaggaacctggcca 312 ||||||||||| || ||||| || ||||||||||| |||||||| ||||| ||||| | | Sbjct: 1564 atcttatcctcttggggaagtatagtgcacctgaaatgccatgttccaggtacctgtcta 1505 Query: 313 aatcctgatccagggacaacgacgattccagt 344 || || || |||||||||||||| |||||||| Sbjct: 1504 aagccagaaccagggacaacgactattccagt 1473 Score = 56.0 bits (28), Expect = 2e-04 Identities = 121/152 (79%) Strand = Plus / Minus Query: 526 aaagatgcgaggattccatctttttctgccttgtatgaagcgtatgattcatcactagcc 585 ||||||| ||| |||||||| || ||||| ||||||| | || || || |||| || | Sbjct: 1291 aaagatgagagaattccatccttctctgctatgtatgattcataggagtcgtcaccaggc 1232 Query: 586 tttggtgggttcatgacaagactagcaaggatctggccagtgatattggagcataggttc 645 || |||||| |||||| || |||||||| || || |||| ||| ||||| || || ||| Sbjct: 1231 ttgggtgggctcatgatgaggctagcaagaatttgaccagagatgttggaacaaagattc 1172 Query: 646 actgatgctattttgtagatctgctctcttac 677 || || || |||||||| |||||||||||||| Sbjct: 1171 acagaagccattttgtatatctgctctcttac 1140
>dbj|AK221072.1| Arabidopsis thaliana mRNA for alanine aminotransferase, complete cds, clone: RAFL22-79-C18 Length = 586 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Minus Query: 253 atcttatcctcctgcggaaggatcgtgcacctgaagtgccatgtgccaggaacctggcca 312 ||||||||||| || ||||| || ||||||||||| |||||||| ||||| ||||| | | Sbjct: 229 atcttatcctcttggggaagtatagtgcacctgaaatgccatgttccaggtacctgtcta 170 Query: 313 aatcctgatccagggacaacgacgattccagt 344 || || || |||||||||||||| |||||||| Sbjct: 169 aagccagaaccagggacaacgactattccagt 138
>emb|BX818614.1|CNS0AE5B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL88ZC08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 883 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Minus Query: 253 atcttatcctcctgcggaaggatcgtgcacctgaagtgccatgtgccaggaacctggcca 312 ||||||||||| || ||||| || ||||||||||| |||||||| ||||| ||||| | | Sbjct: 532 atcttatcctcttggggaagtatagtgcacctgaaatgccatgttccaggtacctgtcta 473 Query: 313 aatcctgatccagggacaacgacgattccagt 344 || || || |||||||||||||| |||||||| Sbjct: 472 aagccagaaccagggacaacgactattccagt 441 Score = 56.0 bits (28), Expect = 2e-04 Identities = 121/152 (79%) Strand = Plus / Minus Query: 526 aaagatgcgaggattccatctttttctgccttgtatgaagcgtatgattcatcactagcc 585 ||||||| ||| |||||||| || ||||| ||||||| | || || || |||| || | Sbjct: 259 aaagatgagagaattccatccttctctgctatgtatgattcataggagtcgtcaccaggc 200 Query: 586 tttggtgggttcatgacaagactagcaaggatctggccagtgatattggagcataggttc 645 || |||||| |||||| || |||||||| || || |||| ||| ||||| || || ||| Sbjct: 199 ttgggtgggctcatgatgaggctagcaagaatttgaccagagatgttggaacaaagattc 140 Query: 646 actgatgctattttgtagatctgctctcttac 677 || || || |||||||| |||||||||||||| Sbjct: 139 acagaagccattttgtatatctgctctcttac 108
>gb|AF275372.1|AF275372 Arabidopsis thaliana alanine aminotransferase (ALAAT1) mRNA, complete cds Length = 2024 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Minus Query: 253 atcttatcctcctgcggaaggatcgtgcacctgaagtgccatgtgccaggaacctggcca 312 ||||||||||| || ||||| || ||||||||||| |||||||| ||||| ||||| | | Sbjct: 1684 atcttatcctcttggggaagtatagtgcacctgaaatgccatgttccaggtacctgtcta 1625 Query: 313 aatcctgatccagggacaacgacgattccagt 344 || || || |||||||||||||| |||||||| Sbjct: 1624 aagccagaaccagggacaacgactattccagt 1593 Score = 56.0 bits (28), Expect = 2e-04 Identities = 121/152 (79%) Strand = Plus / Minus Query: 526 aaagatgcgaggattccatctttttctgccttgtatgaagcgtatgattcatcactagcc 585 ||||||| ||| |||||||| || ||||| ||||||| | || || || |||| || | Sbjct: 1411 aaagatgagagaattccatccttctctgctatgtatgattcataggagtcgtcaccaggc 1352 Query: 586 tttggtgggttcatgacaagactagcaaggatctggccagtgatattggagcataggttc 645 || |||||| |||||| || |||||||| || || |||| ||| ||||| || || ||| Sbjct: 1351 ttgggtgggctcatgatgaggctagcaagaatttgaccagagatgttggaacaaagattc 1292 Query: 646 actgatgctattttgtagatctgctctcttac 677 || || || |||||||| |||||||||||||| Sbjct: 1291 acagaagccattttgtatatctgctctcttac 1260
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 75.8 bits (38), Expect = 2e-10 Identities = 107/130 (82%) Strand = Plus / Plus Query: 355 agacgaagagcatagaatgcatcaggtgctttgttagcagctttagcagcctcaattgcc 414 ||||| ||||| |||||| |||||||||||||||| |||| | ||||||||||||||| Sbjct: 4366716 agacgtagagcgtagaatacatcaggtgctttgttgacagccctggcagcctcaattgcc 4366775 Query: 415 ttctgtggcagacagatttgagggaacacgtacattgctccttcagcctcgttgcaagta 474 |||||||| ||| | || | ||||||| ||||| || ||||| | || |||||| ||| Sbjct: 4366776 ttctgtggtagataaatccgtgggaacagatacatcgccccttccgtcttgttgcatgta 4366835 Query: 475 attccctcaa 484 ||||| |||| Sbjct: 4366836 attccatcaa 4366845 Score = 75.8 bits (38), Expect = 2e-10 Identities = 89/106 (83%) Strand = Plus / Plus Query: 191 agtcacgatactctgacatgaacgcctcatggaacaccgtgaagcgggagatgactgccg 250 |||| ||||||| |||||||||| |||||||||| || ||||||||||||| | | | Sbjct: 4366259 agtcgcgatactgtgacatgaactcctcatggaattccctgaagcgggagatcatcgaag 4366318 Query: 251 ggatcttatcctcctgcggaaggatcgtgcacctgaagtgccatgt 296 | ||||| ||||||||||| ||||||||||| || | ||||||||| Sbjct: 4366319 gtatcttctcctcctgcggcaggatcgtgcatctcacgtgccatgt 4366364 Score = 60.0 bits (30), Expect = 1e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 610 gcaaggatctggccagtgatattggagcataggttcactgatgctattttgtagatctgc 669 |||||||||||||| |||||||| || || | ||| || ||||| |||||||||| || Sbjct: 4367150 gcaaggatctggccggtgatatttgaacacaagttaacagatgcaattttgtagagttgt 4367209 Query: 670 tctcttactggagcactgaagccagt 695 ||||| ||||||| ||||||||||| Sbjct: 4367210 tctctaactggagtgctgaagccagt 4367235
>gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032G08, from Chromosome 3, complete sequence Length = 122052 Score = 75.8 bits (38), Expect = 2e-10 Identities = 89/106 (83%) Strand = Plus / Minus Query: 191 agtcacgatactctgacatgaacgcctcatggaacaccgtgaagcgggagatgactgccg 250 |||| ||||||| |||||||||| |||||||||| || ||||||||||||| | | | Sbjct: 60238 agtcgcgatactgtgacatgaactcctcatggaattccctgaagcgggagatcatcgaag 60179 Query: 251 ggatcttatcctcctgcggaaggatcgtgcacctgaagtgccatgt 296 | ||||| ||||||||||| ||||||||||| || | ||||||||| Sbjct: 60178 gtatcttctcctcctgcggcaggatcgtgcatctcacgtgccatgt 60133 Score = 75.8 bits (38), Expect = 2e-10 Identities = 107/130 (82%) Strand = Plus / Minus Query: 355 agacgaagagcatagaatgcatcaggtgctttgttagcagctttagcagcctcaattgcc 414 ||||| ||||| |||||| |||||||||||||||| |||| | ||||||||||||||| Sbjct: 59781 agacgtagagcgtagaatacatcaggtgctttgttgacagccctggcagcctcaattgcc 59722 Query: 415 ttctgtggcagacagatttgagggaacacgtacattgctccttcagcctcgttgcaagta 474 |||||||| ||| | || | ||||||| ||||| || ||||| | || |||||| ||| Sbjct: 59721 ttctgtggtagataaatccgtgggaacagatacatcgccccttccgtcttgttgcatgta 59662 Query: 475 attccctcaa 484 ||||| |||| Sbjct: 59661 attccatcaa 59652 Score = 60.0 bits (30), Expect = 1e-05 Identities = 72/86 (83%) Strand = Plus / Minus Query: 610 gcaaggatctggccagtgatattggagcataggttcactgatgctattttgtagatctgc 669 |||||||||||||| |||||||| || || | ||| || ||||| |||||||||| || Sbjct: 59347 gcaaggatctggccggtgatatttgaacacaagttaacagatgcaattttgtagagttgt 59288 Query: 670 tctcttactggagcactgaagccagt 695 ||||| ||||||| ||||||||||| Sbjct: 59287 tctctaactggagtgctgaagccagt 59262
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 75.8 bits (38), Expect = 2e-10 Identities = 107/130 (82%) Strand = Plus / Plus Query: 355 agacgaagagcatagaatgcatcaggtgctttgttagcagctttagcagcctcaattgcc 414 ||||| ||||| |||||| |||||||||||||||| |||| | ||||||||||||||| Sbjct: 4366831 agacgtagagcgtagaatacatcaggtgctttgttgacagccctggcagcctcaattgcc 4366890 Query: 415 ttctgtggcagacagatttgagggaacacgtacattgctccttcagcctcgttgcaagta 474 |||||||| ||| | || | ||||||| ||||| || ||||| | || |||||| ||| Sbjct: 4366891 ttctgtggtagataaatccgtgggaacagatacatcgccccttccgtcttgttgcatgta 4366950 Query: 475 attccctcaa 484 ||||| |||| Sbjct: 4366951 attccatcaa 4366960 Score = 75.8 bits (38), Expect = 2e-10 Identities = 89/106 (83%) Strand = Plus / Plus Query: 191 agtcacgatactctgacatgaacgcctcatggaacaccgtgaagcgggagatgactgccg 250 |||| ||||||| |||||||||| |||||||||| || ||||||||||||| | | | Sbjct: 4366374 agtcgcgatactgtgacatgaactcctcatggaattccctgaagcgggagatcatcgaag 4366433 Query: 251 ggatcttatcctcctgcggaaggatcgtgcacctgaagtgccatgt 296 | ||||| ||||||||||| ||||||||||| || | ||||||||| Sbjct: 4366434 gtatcttctcctcctgcggcaggatcgtgcatctcacgtgccatgt 4366479 Score = 60.0 bits (30), Expect = 1e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 610 gcaaggatctggccagtgatattggagcataggttcactgatgctattttgtagatctgc 669 |||||||||||||| |||||||| || || | ||| || ||||| |||||||||| || Sbjct: 4367265 gcaaggatctggccggtgatatttgaacacaagttaacagatgcaattttgtagagttgt 4367324 Query: 670 tctcttactggagcactgaagccagt 695 ||||| ||||||| ||||||||||| Sbjct: 4367325 tctctaactggagtgctgaagccagt 4367350
>gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence Length = 405672 Score = 61.9 bits (31), Expect = 3e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 253 atcttatcctcctgcggaaggatcgtgcacctgaagtgccatgtgccaggaacct 307 ||||| ||||||||||| || |||||||||||||||||||| || ||||| |||| Sbjct: 99128 atcttgtcctcctgcggcagtatcgtgcacctgaagtgccacgttccagggacct 99182 Score = 52.0 bits (26), Expect = 0.003 Identities = 59/70 (84%) Strand = Plus / Plus Query: 584 cctttggtgggttcatgacaagactagcaaggatctggccagtgatattggagcataggt 643 |||||||||||||||| ||||| |||||||| || || || | | ||||||||| |||| Sbjct: 99892 cctttggtgggttcattacaaggctagcaagaatttgccccgaaacattggagcacaggt 99951 Query: 644 tcactgatgc 653 | |||||||| Sbjct: 99952 ttactgatgc 99961
>gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence Length = 323584 Score = 61.9 bits (31), Expect = 3e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 253 atcttatcctcctgcggaaggatcgtgcacctgaagtgccatgtgccaggaacct 307 ||||| ||||||||||| || |||||||||||||||||||| || ||||| |||| Sbjct: 88151 atcttgtcctcctgcggcagtatcgtgcacctgaagtgccacgttccagggacct 88205 Score = 52.0 bits (26), Expect = 0.003 Identities = 59/70 (84%) Strand = Plus / Plus Query: 584 cctttggtgggttcatgacaagactagcaaggatctggccagtgatattggagcataggt 643 |||||||||||||||| ||||| |||||||| || || || | | ||||||||| |||| Sbjct: 88928 cctttggtgggttcattacaaggctagcaagaatttgccccgaaacattggagcacaggt 88987 Query: 644 tcactgatgc 653 | |||||||| Sbjct: 88988 ttactgatgc 88997
>gb|AC026479.2|T13M22 Sequence of BAC T13M22 from Arabidopsis thaliana chromosome 1, complete sequence Length = 7604 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 253 atcttatcctcctgcggaaggatcgtgcacctgaagtgccatgtgccaggaacct 307 ||||||||||| || ||||| || ||||||||||| |||||||| ||||| |||| Sbjct: 4812 atcttatcctcttggggaagtatagtgcacctgaaatgccatgttccaggtacct 4866 Score = 52.0 bits (26), Expect = 0.003 Identities = 77/94 (81%) Strand = Plus / Plus Query: 584 cctttggtgggttcatgacaagactagcaaggatctggccagtgatattggagcataggt 643 |||| |||||| |||||| || |||||||| || || |||| ||| ||||| || || | Sbjct: 5425 ccttgggtgggctcatgatgaggctagcaagaatttgaccagagatgttggaacaaagat 5484 Query: 644 tcactgatgctattttgtagatctgctctcttac 677 |||| || || |||||||| |||||||||||||| Sbjct: 5485 tcacagaagccattttgtatatctgctctcttac 5518
>ref|NM_105892.3| Arabidopsis thaliana ALAAT2 (ALANINE AMINOTRANSFERASE 2); 1-aminocyclopropane-1-carboxylate synthase/ alanine transaminase/ transferase, transferrin> AT1G72330 (ALAAT2) mRNA, complete cds Length = 1961 Score = 52.0 bits (26), Expect = 0.003 Identities = 53/62 (85%) Strand = Plus / Minus Query: 268 ggaaggatcgtgcacctgaagtgccatgtgccaggaacctggccaaatcctgatccaggg 327 ||||| || ||||| || ||||||||||| ||||||||||| ||||| || || |||||| Sbjct: 1683 ggaagtattgtgcatctaaagtgccatgttccaggaacctgtccaaagccagaaccaggg 1624 Query: 328 ac 329 || Sbjct: 1623 ac 1622
>gb|AY035086.1| Arabidopsis thaliana putative alanine aminotransferase (At1g72330) mRNA, partial cds Length = 1806 Score = 52.0 bits (26), Expect = 0.003 Identities = 53/62 (85%) Strand = Plus / Minus Query: 268 ggaaggatcgtgcacctgaagtgccatgtgccaggaacctggccaaatcctgatccaggg 327 ||||| || ||||| || ||||||||||| ||||||||||| ||||| || || |||||| Sbjct: 1522 ggaagtattgtgcatctaaagtgccatgttccaggaacctgtccaaagccagaaccaggg 1463 Query: 328 ac 329 || Sbjct: 1462 ac 1461
>emb|BX814009.1|CNS0AC6A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB52ZA08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1913 Score = 52.0 bits (26), Expect = 0.003 Identities = 53/62 (85%) Strand = Plus / Minus Query: 268 ggaaggatcgtgcacctgaagtgccatgtgccaggaacctggccaaatcctgatccaggg 327 ||||| || ||||| || ||||||||||| ||||||||||| ||||| || || |||||| Sbjct: 1677 ggaagtattgtgcatctaaagtgccatgttccaggaacctgtccaaagccagaaccaggg 1618 Query: 328 ac 329 || Sbjct: 1617 ac 1616
>emb|BX817586.1|CNS0AALJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL31ZC11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1862 Score = 52.0 bits (26), Expect = 0.003 Identities = 53/62 (85%) Strand = Plus / Minus Query: 268 ggaaggatcgtgcacctgaagtgccatgtgccaggaacctggccaaatcctgatccaggg 327 ||||| || ||||| || ||||||||||| ||||||||||| ||||| || || |||||| Sbjct: 1684 ggaagtattgtgcatctaaagtgccatgttccaggaacctgtccaaagccagaaccaggg 1625 Query: 328 ac 329 || Sbjct: 1624 ac 1623
>gb|AF275371.1|AF275371 Arabidopsis thaliana alanine aminotransferase (ALAAT2) mRNA, complete cds Length = 1829 Score = 52.0 bits (26), Expect = 0.003 Identities = 53/62 (85%) Strand = Plus / Minus Query: 268 ggaaggatcgtgcacctgaagtgccatgtgccaggaacctggccaaatcctgatccaggg 327 ||||| || ||||| || ||||||||||| ||||||||||| ||||| || || |||||| Sbjct: 1677 ggaagtattgtgcatctaaagtgccatgttccaggaacctgtccaaagccagaaccaggg 1618 Query: 328 ac 329 || Sbjct: 1617 ac 1616
>ref|NM_196285.1| Oryza sativa (japonica cultivar-group) putative alanine aminotransferase 2 (OSJNBb0061I18.9), mRNA Length = 1440 Score = 50.1 bits (25), Expect = 0.010 Identities = 61/73 (83%) Strand = Plus / Minus Query: 567 gtatgattcatcactagcctttggtgggttcatgacaagactagcaaggatctggccagt 626 |||||| ||||| | | ||||||||||||||||||| || || |||||||||||||| Sbjct: 1062 gtatgactcatctccaacctttggtgggttcatgactaggctcataaggatctggccaga 1003 Query: 627 gatattggagcat 639 || ||||||||| Sbjct: 1002 tatgttggagcat 990 Score = 40.1 bits (20), Expect = 9.6 Identities = 124/156 (79%), Gaps = 2/156 (1%) Strand = Plus / Minus Query: 217 tcatggaacaccgtgaagcgggagatga-ctgccgggatcttatcctcctgcggaaggat 275 ||||||||||| | ||||||||||| | |||||| | |||| || ||||| || || || Sbjct: 1412 tcatggaacacattaaagcgggagataatctgccgtg-tcttctcttcctgtggcagaat 1354 Query: 276 cgtgcacctgaagtgccatgtgccaggaacctggccaaatcctgatccagggacaacgac 335 ||||| ||||| |||||||| ||||| || || ||||| |||| ||||| ||||| || Sbjct: 1353 tgtgcatctgaaatgccatgttccaggtacttgtccaaacactgagccaggcacaacaac 1294 Query: 336 gattccagtcgactcgaggagacgaagagcatagaa 371 || ||||| ||||| ||||| ||||||||||| Sbjct: 1293 aatcccagtgctttcgagaagacggagagcatagaa 1258
>dbj|AK119373.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-A03, full insert sequence Length = 2959 Score = 50.1 bits (25), Expect = 0.010 Identities = 61/73 (83%) Strand = Plus / Minus Query: 567 gtatgattcatcactagcctttggtgggttcatgacaagactagcaaggatctggccagt 626 |||||| ||||| | | ||||||||||||||||||| || || |||||||||||||| Sbjct: 1333 gtatgactcatctccaacctttggtgggttcatgactaggctcataaggatctggccaga 1274 Query: 627 gatattggagcat 639 || ||||||||| Sbjct: 1273 tatgttggagcat 1261 Score = 40.1 bits (20), Expect = 9.6 Identities = 124/156 (79%), Gaps = 2/156 (1%) Strand = Plus / Minus Query: 217 tcatggaacaccgtgaagcgggagatga-ctgccgggatcttatcctcctgcggaaggat 275 ||||||||||| | ||||||||||| | |||||| | |||| || ||||| || || || Sbjct: 1683 tcatggaacacattaaagcgggagataatctgccgtg-tcttctcttcctgtggcagaat 1625 Query: 276 cgtgcacctgaagtgccatgtgccaggaacctggccaaatcctgatccagggacaacgac 335 ||||| ||||| |||||||| ||||| || || ||||| |||| ||||| ||||| || Sbjct: 1624 tgtgcatctgaaatgccatgttccaggtacttgtccaaacactgagccaggcacaacaac 1565 Query: 336 gattccagtcgactcgaggagacgaagagcatagaa 371 || ||||| ||||| ||||| ||||||||||| Sbjct: 1564 aatcccagtgctttcgagaagacggagagcatagaa 1529
>dbj|AK107029.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-A10, full insert sequence Length = 1696 Score = 50.1 bits (25), Expect = 0.010 Identities = 61/73 (83%) Strand = Plus / Minus Query: 567 gtatgattcatcactagcctttggtgggttcatgacaagactagcaaggatctggccagt 626 |||||| ||||| | | ||||||||||||||||||| || || |||||||||||||| Sbjct: 1226 gtatgactcatctccaacctttggtgggttcatgactaggctcataaggatctggccaga 1167 Query: 627 gatattggagcat 639 || ||||||||| Sbjct: 1166 tatgttggagcat 1154 Score = 40.1 bits (20), Expect = 9.6 Identities = 124/156 (79%), Gaps = 2/156 (1%) Strand = Plus / Minus Query: 217 tcatggaacaccgtgaagcgggagatga-ctgccgggatcttatcctcctgcggaaggat 275 ||||||||||| | ||||||||||| | |||||| | |||| || ||||| || || || Sbjct: 1575 tcatggaacacattaaagcgggagataatctgccgtg-tcttctcttcctgtggcagaat 1517 Query: 276 cgtgcacctgaagtgccatgtgccaggaacctggccaaatcctgatccagggacaacgac 335 ||||| ||||| |||||||| ||||| || || ||||| |||| ||||| ||||| || Sbjct: 1516 tgtgcatctgaaatgccatgttccaggtacttgtccaaacactgagccaggcacaacaac 1457 Query: 336 gattccagtcgactcgaggagacgaagagcatagaa 371 || ||||| ||||| ||||| ||||||||||| Sbjct: 1456 aatcccagtgctttcgagaagacggagagcatagaa 1421
>ref|XM_479171.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1461 Score = 48.1 bits (24), Expect = 0.039 Identities = 48/56 (85%) Strand = Plus / Minus Query: 289 tgccatgtgccaggaacctggccaaatcctgatccagggacaacgacgattccagt 344 ||||| || ||||||||||| |||||||| || ||||| ||||| || |||||||| Sbjct: 1361 tgccacgttccaggaacctgcccaaatccagaaccaggaacaacaacaattccagt 1306
>dbj|AK060481.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-G11, full insert sequence Length = 1217 Score = 48.1 bits (24), Expect = 0.039 Identities = 48/56 (85%) Strand = Plus / Minus Query: 289 tgccatgtgccaggaacctggccaaatcctgatccagggacaacgacgattccagt 344 ||||| || ||||||||||| |||||||| || ||||| ||||| || |||||||| Sbjct: 892 tgccacgttccaggaacctgcccaaatccagaaccaggaacaacaacaattccagt 837
>gb|BT013062.1| Lycopersicon esculentum clone 114318F, mRNA sequence Length = 2081 Score = 46.1 bits (23), Expect = 0.16 Identities = 89/111 (80%) Strand = Plus / Minus Query: 566 cgtatgattcatcactagcctttggtgggttcatgacaagactagcaaggatctggccag 625 ||||||||||||||| |||| || ||| |||||||||| || ||||| ||||| |||| Sbjct: 1375 cgtatgattcatcacccaccttcggagggctcatgacaaggctcgcaagaatctgaccag 1316 Query: 626 tgatattggagcataggttcactgatgctattttgtagatctgctctctta 676 || ||||| || || || || ||||| | |||||| ||||| ||||||| Sbjct: 1315 aaatgttggaacacagattgacagatgccactttgtatatctgttctctta 1265 Score = 42.1 bits (21), Expect = 2.4 Identities = 54/65 (83%) Strand = Plus / Minus Query: 277 gtgcacctgaagtgccatgtgccaggaacctggccaaatcctgatccagggacaacgacg 336 |||||||| || ||||| || |||||| |||||||||||| || || |||||||| || Sbjct: 1664 gtgcacctaaaatgccacgttccaggacgctggccaaatccagagcctgggacaacaaca 1605 Query: 337 attcc 341 ||||| Sbjct: 1604 attcc 1600
>gb|AC122805.4| Mus musculus BAC clone RP23-296O23 from 3, complete sequence Length = 202733 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 484 agtttattgaatgcatgctccaa 506 ||||||||||||||||||||||| Sbjct: 88887 agtttattgaatgcatgctccaa 88909
>gb|AC151666.15| Medicago truncatula clone mth2-30n15, complete sequence Length = 116410 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 277 gtgcacctgaagtgccatgtgccaggaacct 307 |||||||| || ||||||||||||||||||| Sbjct: 52397 gtgcacctaaaatgccatgtgccaggaacct 52367
>gb|AC157534.12| Medicago truncatula clone mth2-50p19, complete sequence Length = 116410 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 277 gtgcacctgaagtgccatgtgccaggaacct 307 |||||||| || ||||||||||||||||||| Sbjct: 52397 gtgcacctaaaatgccatgtgccaggaacct 52367
>emb|BX936317.16| Zebrafish DNA sequence from clone CH211-208C9 in linkage group 20, complete sequence Length = 208051 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 26 atataccacacacacaataagga 48 ||||||||||||||||||||||| Sbjct: 151223 atataccacacacacaataagga 151201
>gb|AC132143.3| Mus musculus BAC clone RP23-20J10 from 3, complete sequence Length = 205880 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 484 agtttattgaatgcatgctccaa 506 ||||||||||||||||||||||| Sbjct: 192361 agtttattgaatgcatgctccaa 192383
>gb|AY111713.1| Zea mays CL9204_1 mRNA sequence Length = 605 Score = 44.1 bits (22), Expect = 0.62 Identities = 70/86 (81%) Strand = Plus / Plus Query: 259 tcctcctgcggaaggatcgtgcacctgaagtgccatgtgccaggaacctggccaaatcct 318 ||||||||||| || |||| | | |||| ||||||||| || || ||||| ||||| || Sbjct: 448 tcctcctgcggcagtatcggggatctgatgtgccatgttccggggacctgtccaaaacca 507 Query: 319 gatccagggacaacgacgattccagt 344 || |||||||| | |||||| ||||| Sbjct: 508 gaaccagggacgaagacgatcccagt 533
>gb|AY342007.1| Capsicum annuum alanine aminotransferase (AlaAT) mRNA, complete cds Length = 1858 Score = 42.1 bits (21), Expect = 2.4 Identities = 54/65 (83%) Strand = Plus / Minus Query: 277 gtgcacctgaagtgccatgtgccaggaacctggccaaatcctgatccagggacaacgacg 336 |||||||| || ||||| || ||||||||||||| ||||| || || || ||||| ||| Sbjct: 1476 gtgcacctaaaatgccaggttccaggaacctggcggaatccagagcctggaacaacaacg 1417 Query: 337 attcc 341 ||||| Sbjct: 1416 attcc 1412
>gb|CP000107.1| Ehrlichia canis str. Jake, complete genome Length = 1315030 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 383 ctttgttagcagctttagcagcctc 407 |||| |||||||||||||||||||| Sbjct: 741538 ctttattagcagctttagcagcctc 741562
>emb|BX324136.11| Zebrafish DNA sequence from clone DKEY-31C13 in linkage group 10, complete sequence Length = 255306 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 280 cacctgaagtgccatgtgcca 300 ||||||||||||||||||||| Sbjct: 59682 cacctgaagtgccatgtgcca 59662
>gb|AC159260.3| Mus musculus BAC clone RP24-85M18 from chromosome 3, complete sequence Length = 208348 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 tttgctttattttgtctcat 77 |||||||||||||||||||| Sbjct: 24039 tttgctttattttgtctcat 24058
>ref|XM_882955.1| PREDICTED: Bos taurus similar to CG18659-PA, isoform A, transcript variant 3 (LOC511230), mRNA Length = 2402 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 aaaatccgatataccacacacaca 41 ||||||||| |||||||||||||| Sbjct: 346 aaaatccgacataccacacacaca 369
>gb|AC131757.3| Mus musculus BAC clone RP24-210I7 from chromosome 3, complete sequence Length = 161869 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 tttgctttattttgtctcat 77 |||||||||||||||||||| Sbjct: 64251 tttgctttattttgtctcat 64232
>gb|AC116953.5| Mus musculus BAC clone RP23-119H17 from chromosome 7, complete sequence Length = 193506 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 639 taggttcactgatgctattt 658 |||||||||||||||||||| Sbjct: 81494 taggttcactgatgctattt 81475
>emb|AL513220.9| Human DNA sequence from clone RP11-566C13 on chromosome 1 Contains the 5' end of the gene for nucleolar GTPase (HUMAUANTIG), the gene for a novel protein (FLJ40906) and a CpG island, complete sequence Length = 94638 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 cagcctcaattgccttctgt 420 |||||||||||||||||||| Sbjct: 22718 cagcctcaattgccttctgt 22737
>emb|AL354692.23| Human DNA sequence from clone RP11-361M4 on chromosome 9 Contains a novel pseudogene, complete sequence Length = 110443 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 534 gaggattccatctttttctg 553 |||||||||||||||||||| Sbjct: 96031 gaggattccatctttttctg 96012
>emb|AL117380.28|HSJ749H19 Human DNA sequence from clone RP4-749H19 on chromosome 20q13.11-13.33 Contains ESTs, STSs, GSSs and a CpG island, complete sequence Length = 178473 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 584 cctttggtgggttcatgaca 603 |||||||||||||||||||| Sbjct: 177852 cctttggtgggttcatgaca 177833
>emb|CR954985.1| Human DNA sequence from clone XX-HCC1954_35K08, complete sequence Length = 164576 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 gccttctgtggcagacagat 431 |||||||||||||||||||| Sbjct: 93723 gccttctgtggcagacagat 93742
>gb|AC091155.5| Homo sapiens chromosome 17, clone CTD1-2306D4, complete sequence Length = 144430 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 tttgctttattttgtctcat 77 |||||||||||||||||||| Sbjct: 125078 tttgctttattttgtctcat 125059
>gb|AC099047.2| Homo sapiens chromosome 3 clone RP11-73I17, complete sequence Length = 184296 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 534 gaggattccatctttttctg 553 |||||||||||||||||||| Sbjct: 176503 gaggattccatctttttctg 176522
>gb|AC021576.12| Homo sapiens chromosome 8, clone RP11-700M17, complete sequence Length = 166450 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 534 gaggattccatctttttctg 553 |||||||||||||||||||| Sbjct: 127202 gaggattccatctttttctg 127183
>dbj|AK029416.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4833432D21 product:unclassifiable, full insert sequence Length = 2365 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 650 atgctattttgtagatctgctctc 673 |||||||||||||||||| ||||| Sbjct: 316 atgctattttgtagatcttctctc 339
>gb|AC096718.3| Homo sapiens BAC clone RP11-10P19 from 4, complete sequence Length = 166745 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 tttattttgtctcatctaga 82 |||||||||||||||||||| Sbjct: 136562 tttattttgtctcatctaga 136581
>gb|AC074224.3|AC074224 Mus musculus strain C57BL6/J chromosome 2 clone RP23-43C3, complete sequence Length = 188989 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 650 atgctattttgtagatctgctctc 673 |||||||||||||||||| ||||| Sbjct: 69947 atgctattttgtagatcttctctc 69970
>gb|AC016529.7|AC016529 Arabidopsis thaliana chromosome 1 BAC T10D10 genomic sequence, complete sequence Length = 87039 Score = 40.1 bits (20), Expect = 9.6 Identities = 35/40 (87%) Strand = Plus / Plus Query: 268 ggaaggatcgtgcacctgaagtgccatgtgccaggaacct 307 ||||| || ||||| || ||||||||||| |||||||||| Sbjct: 76737 ggaagtattgtgcatctaaagtgccatgttccaggaacct 76776
>gb|AC131013.2| Homo sapiens 3 BAC RP13-584I6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 77997 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 534 gaggattccatctttttctg 553 |||||||||||||||||||| Sbjct: 12542 gaggattccatctttttctg 12523
>gb|AC006560.8| Homo sapiens 12 BAC RPCI11-792F18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 202478 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cacacacacaataaggatga 51 |||||||||||||||||||| Sbjct: 187447 cacacacacaataaggatga 187428
>gb|AC007539.8| Homo sapiens 12 BAC RCPI11-935C2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 177147 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cacacacacaataaggatga 51 |||||||||||||||||||| Sbjct: 62375 cacacacacaataaggatga 62356
>gb|AC009283.6| Homo sapiens chromosome 17, clone RP11-390P24, complete sequence Length = 175320 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 gccttctgtggcagacagat 431 |||||||||||||||||||| Sbjct: 172534 gccttctgtggcagacagat 172553
>gb|AC009837.13| Homo sapiens chromosome 17, clone RP11-550K23, complete sequence Length = 168509 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 tttgctttattttgtctcat 77 |||||||||||||||||||| Sbjct: 81133 tttgctttattttgtctcat 81152
>gb|AC158181.2| Selaginella moellendorffii clone JGIASXY-5D1, complete sequence Length = 34893 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 tggtatctgtttaaaaatcc 24 |||||||||||||||||||| Sbjct: 791 tggtatctgtttaaaaatcc 810
>dbj|AB091394.1| Hepatitis E virus genomic RNA, nearly complete genome, isolate:JJT-Kan Length = 7218 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 gttagcagctttagcagcct 406 |||||||||||||||||||| Sbjct: 3439 gttagcagctttagcagcct 3420
>emb|Z68010.1|CET01C1 Caenorhabditis elegans Cosmid T01C1, complete sequence Length = 27602 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 656 ttttgtagatctgctctctt 675 |||||||||||||||||||| Sbjct: 7733 ttttgtagatctgctctctt 7714
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 381 tgctttgttagcagctttagcagc 404 |||||| ||||||||||||||||| Sbjct: 1712417 tgctttcttagcagctttagcagc 1712394
>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence Length = 2906179 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 381 tgctttgttagcagctttagcagc 404 |||||| ||||||||||||||||| Sbjct: 2197381 tgcttttttagcagctttagcagc 2197404
>gb|AF082843.1|AF082843 Swine hepatitis E virus nonstructural polyprotein and putative capsid protein genes, complete cds; and unknown gene Length = 7207 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 gttagcagctttagcagcct 406 |||||||||||||||||||| Sbjct: 3456 gttagcagctttagcagcct 3437
>gb|AC115835.6| Mus musculus chromosome 3, clone RP24-184C18, complete sequence Length = 172025 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 catggctttgctttattttg 71 |||||||||||||||||||| Sbjct: 23050 catggctttgctttattttg 23069
>dbj|AP001858.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-959F10, complete sequence Length = 210723 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 534 gaggattccatctttttctg 553 |||||||||||||||||||| Sbjct: 64623 gaggattccatctttttctg 64642
>emb|AL845368.6| Mouse DNA sequence from clone RP23-206D14 on chromosome 2, complete sequence Length = 159056 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 650 atgctattttgtagatctgctctc 673 |||||||||||||||||| ||||| Sbjct: 9716 atgctattttgtagatcttctctc 9693
>gb|AY575859.1| Hepatitis E virus clone pSHEV-3, complete genome Length = 7257 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 gttagcagctttagcagcct 406 |||||||||||||||||||| Sbjct: 3473 gttagcagctttagcagcct 3454
>gb|AY575858.1| Hepatitis E virus clone pSHEV-2, complete genome Length = 7257 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 gttagcagctttagcagcct 406 |||||||||||||||||||| Sbjct: 3473 gttagcagctttagcagcct 3454
>gb|AY575857.1| Hepatitis E virus clone pSHEV-1, complete genome Length = 7257 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 gttagcagctttagcagcct 406 |||||||||||||||||||| Sbjct: 3473 gttagcagctttagcagcct 3454
>gb|AC110495.8| Homo sapiens chromosome 17, clone CTD-3082P18, complete sequence Length = 62309 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gccttctgtggcagacagat 431 |||||||||||||||||||| Sbjct: 10349 gccttctgtggcagacagat 10330
>dbj|AP003478.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1247B1 Length = 153894 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 534 gaggattccatctttttctg 553 |||||||||||||||||||| Sbjct: 3298 gaggattccatctttttctg 3317
>dbj|AP003351.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1184D12 Length = 176854 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 534 gaggattccatctttttctg 553 |||||||||||||||||||| Sbjct: 154427 gaggattccatctttttctg 154446 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,768,310 Number of Sequences: 3902068 Number of extensions: 5768310 Number of successful extensions: 138174 Number of sequences better than 10.0: 82 Number of HSP's better than 10.0 without gapping: 82 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 137848 Number of HSP's gapped (non-prelim): 318 length of query: 702 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 679 effective length of database: 17,143,297,704 effective search space: 11640299141016 effective search space used: 11640299141016 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
