ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd27o15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479231.1| Oryza sativa (japonica cultivar-group), mRNA 192 1e-45
2gb|AF435643.1| Oryza sativa CSLA7 mRNA, partial cds 192 1e-45
3dbj|AK122106.1| Oryza sativa (japonica cultivar-group) cDNA clon... 192 1e-45
4dbj|AK064833.1| Oryza sativa (japonica cultivar-group) cDNA clon... 192 1e-45
5dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 105 2e-19
6dbj|AP004260.2| Oryza sativa (japonica cultivar-group) genomic D... 105 2e-19
7dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic D... 105 2e-19
8gb|AY111707.1| Zea mays CL16175_1 mRNA sequence 88 5e-14
9ref|XM_470723.1| Oryza sativa (japonica cultivar-group), mRNA 58 5e-05
10gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 58 5e-05
11gb|AC084766.8| Oryza sativa chromosome 3 BAC OSJNBb0048D20 genom... 58 5e-05
12tpg|BK000083.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-gr... 58 5e-05
13dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 58 5e-05
14dbj|AK111424.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 5e-05
15emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E ... 48 0.044
16dbj|AP006732.1| Lotus japonicus genomic DNA, chromosome 1, clone... 48 0.044
17gb|AC125816.8| Homo sapiens 12 BAC RP11-110A12 (Roswell Park Can... 46 0.17
18gb|AC113590.11| Mus musculus chromosome 5, clone RP23-277L17, co... 44 0.69
19gb|AC125190.4| Mus musculus BAC clone RP23-288O24 from chromosom... 44 0.69
20gb|AC158126.7| Mus musculus chromosome 5, clone RP24-220P21, com... 44 0.69
21gb|AC164410.5| Mus musculus chromosome 5, clone RP23-6J21, compl... 42 2.7
22gb|U39678.2| Caenorhabditis elegans cosmid C39D10, complete sequ... 42 2.7
23gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chr... 42 2.7
24gb|AC110217.10| Mus musculus chromosome 1, clone RP24-510P18, co... 42 2.7
25gb|AC148466.2| Xenopus tropicalis clone CH216-69C13, complete se... 42 2.7
26ref|XM_572358.1| Cryptococcus neoformans var. neoformans JEC21 a... 42 2.7
27gb|AC112261.4| Mus musculus BAC clone RP23-204O17 from 3, comple... 42 2.7
28gb|AF449447.1| Mus musculus C3H chromosome 3 hyplip1 region 42 2.7
29gb|AC009194.9| Homo sapiens, clone RP11-44B13, complete sequence 42 2.7
30gb|AC010632.7| Homo sapiens chromosome 19 clone CTD-2293H3, comp... 42 2.7
31dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.7
32gb|AE014845.1| Plasmodium falciparum 3D7 chromosome 12, section ... 42 2.7
33emb|AL928951.17| Zebrafish DNA sequence from clone CH211-67N3, c... 42 2.7
34emb|AL355836.3|CNS05TCQ Human chromosome 14 DNA sequence BAC R-8... 42 2.7
35gb|AC101547.9| Mus musculus chromosome 5, clone RP23-193C5, comp... 42 2.7
36gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.7
37emb|AL954152.5|CNS08CCQ Oryza sativa chromosome 12, . BAC OSJNBb... 42 2.7
38emb|AL844875.4|CNS08CAY Oryza sativa chromosome 12, . BAC OSJNBb... 42 2.7
39gb|AC134523.5| Mus musculus BAC clone RP24-492M8 from 5, complet... 42 2.7 
>ref|XM_479231.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2021

 Score =  192 bits (97), Expect = 1e-45
 Identities = 319/393 (81%)
 Strand = Plus / Minus

                                                                        
Query: 365  ccactcgttaaactccgataattcgaatagaccagacagtgcagctctcatgcgatgcat 424
            ||||| ||||||| | |||||||| |  || ||||  |||||||||||||||||| ||| 
Sbjct: 1538 ccacttgttaaacccagataattccataaggccagttagtgcagctctcatgcgaagcac 1479

                                                                        
Query: 425  tgtcatcacactctcgaacaaaatccaaaatggcagaatgtgtatattttttggatgtct 484
             |||||||||||||| || || |||||||| ||||  ||||||| |||| |||||| |||
Sbjct: 1478 agtcatcacactctcaaataagatccaaaacggcattatgtgtagatttcttggatttct 1419

                                                                        
Query: 485  aatagctgtgaccactaaaagtaccgtgggaatatatgcgatgccccagactggtaggta 544
             || | |||||  |  | |||| || | ||||| || ||||  ||||||| ||||| | |
Sbjct: 1418 tatggttgtgataatcagaagtgccataggaatgtaggcgacaccccagattggtatgaa 1359

                                                                        
Query: 545  tagttctggtatcatgactgatatcggaactatgatattgtagagaatacatgcgaccgt 604
            ||| ||||| |||||||| || |  || |||||||| ||||| |||| ||| || ||| |
Sbjct: 1358 tagctctgggatcatgaccgacaaagggactatgatgttgtaaagaacacaggcaaccat 1299

                                                                        
Query: 605  aggggccacaactctccgaaccaagaagaagctatagagcatatggaatttcttgacaag 664
            |||||| ||||||||||| ||||| ||||||||||||||||||| ||| |||||||  ||
Sbjct: 1298 aggggctacaactctccgcaccaaaaagaagctatagagcatatagaacttcttgaggag 1239

                                                                        
Query: 665  agatacatccttggcagtcaaaatatcttttgctacctttcggaataaatgtgcaccacc 724
             |||| |||||||||   ||||| |||  |||||| |||||||||||| | |||||||||
Sbjct: 1238 cgatatatccttggctaccaaaacatccattgctatctttcggaataagtttgcaccacc 1179

                                             
Query: 725  acaagaccaccggaattgctgtcgacagtaggc 757
             || | |||||| ||||||||||||||||||||
Sbjct: 1178 gcaggcccaccgaaattgctgtcgacagtaggc 1146



 Score =  113 bits (57), Expect = 9e-22
 Identities = 117/137 (85%)
 Strand = Plus / Minus

                                                                        
Query: 164  aaatgctagtccttggagatagagattaaaatagtagctagtcttgccagggaatacaag 223
            ||||||||||||||||||||| |||||||||||||||||||| || ||| |||| | |||
Sbjct: 1739 aaatgctagtccttggagatacagattaaaatagtagctagttttcccatggaagataag 1680

                                                                        
Query: 224  gttgtatgacgcacagaagaaaagaaacgctgaaaataaaatctcacggaaattaaccct 283
            ||| ||||||||||||||||  |||||| | ||||||  ||||||  | | |||||  ||
Sbjct: 1679 gttatatgacgcacagaagatgagaaacaccgaaaatccaatctcgggaagattaattct 1620

                             
Query: 284  gtctcttaatcttttcc 300
            ||||||||| |||||||
Sbjct: 1619 gtctcttaaccttttcc 1603
to top
>gb|AF435643.1| Oryza sativa CSLA7 mRNA, partial cds
          Length = 1849

 Score =  192 bits (97), Expect = 1e-45
 Identities = 319/393 (81%)
 Strand = Plus / Minus

                                                                        
Query: 365  ccactcgttaaactccgataattcgaatagaccagacagtgcagctctcatgcgatgcat 424
            ||||| ||||||| | |||||||| |  || ||||  |||||||||||||||||| ||| 
Sbjct: 1191 ccacttgttaaacccagataattccataaggccagttagtgcagctctcatgcgaagcac 1132

                                                                        
Query: 425  tgtcatcacactctcgaacaaaatccaaaatggcagaatgtgtatattttttggatgtct 484
             |||||||||||||| || || |||||||| ||||  ||||||| |||| |||||| |||
Sbjct: 1131 agtcatcacactctcaaataagatccaaaacggcattatgtgtagatttcttggatttct 1072

                                                                        
Query: 485  aatagctgtgaccactaaaagtaccgtgggaatatatgcgatgccccagactggtaggta 544
             || | |||||  |  | |||| || | ||||| || ||||  ||||||| ||||| | |
Sbjct: 1071 tatggttgtgataatcagaagtgccataggaatgtaggcgacaccccagattggtatgaa 1012

                                                                        
Query: 545  tagttctggtatcatgactgatatcggaactatgatattgtagagaatacatgcgaccgt 604
            ||| ||||| |||||||| || |  || |||||||| ||||| |||| ||| || ||| |
Sbjct: 1011 tagctctgggatcatgaccgacaaagggactatgatgttgtaaagaacacaggcaaccat 952

                                                                        
Query: 605  aggggccacaactctccgaaccaagaagaagctatagagcatatggaatttcttgacaag 664
            |||||| ||||||||||| ||||| ||||||||||||||||||| ||| |||||||  ||
Sbjct: 951  aggggctacaactctccgcaccaaaaagaagctatagagcatatagaacttcttgaggag 892

                                                                        
Query: 665  agatacatccttggcagtcaaaatatcttttgctacctttcggaataaatgtgcaccacc 724
             |||| |||||||||   ||||| |||  |||||| |||||||||||| | |||||||||
Sbjct: 891  cgatatatccttggctaccaaaacatccattgctatctttcggaataagtttgcaccacc 832

                                             
Query: 725  acaagaccaccggaattgctgtcgacagtaggc 757
             || | |||||| ||||||||||||||||||||
Sbjct: 831  gcaggcccaccgaaattgctgtcgacagtaggc 799



 Score =  113 bits (57), Expect = 9e-22
 Identities = 117/137 (85%)
 Strand = Plus / Minus

                                                                        
Query: 164  aaatgctagtccttggagatagagattaaaatagtagctagtcttgccagggaatacaag 223
            ||||||||||||||||||||| |||||||||||||||||||| || ||| |||| | |||
Sbjct: 1392 aaatgctagtccttggagatacagattaaaatagtagctagttttcccatggaagataag 1333

                                                                        
Query: 224  gttgtatgacgcacagaagaaaagaaacgctgaaaataaaatctcacggaaattaaccct 283
            ||| ||||||||||||||||  |||||| | ||||||  ||||||  | | |||||  ||
Sbjct: 1332 gttatatgacgcacagaagatgagaaacaccgaaaatccaatctcgggaagattaattct 1273

                             
Query: 284  gtctcttaatcttttcc 300
            ||||||||| |||||||
Sbjct: 1272 gtctcttaaccttttcc 1256
to top
>dbj|AK122106.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126E08, full
            insert sequence
          Length = 2105

 Score =  192 bits (97), Expect = 1e-45
 Identities = 319/393 (81%)
 Strand = Plus / Minus

                                                                        
Query: 365  ccactcgttaaactccgataattcgaatagaccagacagtgcagctctcatgcgatgcat 424
            ||||| ||||||| | |||||||| |  || ||||  |||||||||||||||||| ||| 
Sbjct: 1618 ccacttgttaaacccagataattccataaggccagttagtgcagctctcatgcgaagcac 1559

                                                                        
Query: 425  tgtcatcacactctcgaacaaaatccaaaatggcagaatgtgtatattttttggatgtct 484
             |||||||||||||| || || |||||||| ||||  ||||||| |||| |||||| |||
Sbjct: 1558 agtcatcacactctcaaataagatccaaaacggcattatgtgtagatttcttggatttct 1499

                                                                        
Query: 485  aatagctgtgaccactaaaagtaccgtgggaatatatgcgatgccccagactggtaggta 544
             || | |||||  |  | |||| || | ||||| || ||||  ||||||| ||||| | |
Sbjct: 1498 tatggttgtgataatcagaagtgccataggaatgtaggcgacaccccagattggtatgaa 1439

                                                                        
Query: 545  tagttctggtatcatgactgatatcggaactatgatattgtagagaatacatgcgaccgt 604
            ||| ||||| |||||||| || |  || |||||||| ||||| |||| ||| || ||| |
Sbjct: 1438 tagctctgggatcatgaccgacaaagggactatgatgttgtaaagaacacaggcaaccat 1379

                                                                        
Query: 605  aggggccacaactctccgaaccaagaagaagctatagagcatatggaatttcttgacaag 664
            |||||| ||||||||||| ||||| ||||||||||||||||||| ||| |||||||  ||
Sbjct: 1378 aggggctacaactctccgcaccaaaaagaagctatagagcatatagaacttcttgaggag 1319

                                                                        
Query: 665  agatacatccttggcagtcaaaatatcttttgctacctttcggaataaatgtgcaccacc 724
             |||| |||||||||   ||||| |||  |||||| |||||||||||| | |||||||||
Sbjct: 1318 cgatatatccttggctaccaaaacatccattgctatctttcggaataagtttgcaccacc 1259

                                             
Query: 725  acaagaccaccggaattgctgtcgacagtaggc 757
             || | |||||| ||||||||||||||||||||
Sbjct: 1258 gcaggcccaccgaaattgctgtcgacagtaggc 1226



 Score =  113 bits (57), Expect = 9e-22
 Identities = 117/137 (85%)
 Strand = Plus / Minus

                                                                        
Query: 164  aaatgctagtccttggagatagagattaaaatagtagctagtcttgccagggaatacaag 223
            ||||||||||||||||||||| |||||||||||||||||||| || ||| |||| | |||
Sbjct: 1819 aaatgctagtccttggagatacagattaaaatagtagctagttttcccatggaagataag 1760

                                                                        
Query: 224  gttgtatgacgcacagaagaaaagaaacgctgaaaataaaatctcacggaaattaaccct 283
            ||| ||||||||||||||||  |||||| | ||||||  ||||||  | | |||||  ||
Sbjct: 1759 gttatatgacgcacagaagatgagaaacaccgaaaatccaatctcgggaagattaattct 1700

                             
Query: 284  gtctcttaatcttttcc 300
            ||||||||| |||||||
Sbjct: 1699 gtctcttaaccttttcc 1683
to top
>dbj|AK064833.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F18, full
            insert sequence
          Length = 2021

 Score =  192 bits (97), Expect = 1e-45
 Identities = 319/393 (81%)
 Strand = Plus / Minus

                                                                        
Query: 365  ccactcgttaaactccgataattcgaatagaccagacagtgcagctctcatgcgatgcat 424
            ||||| ||||||| | |||||||| |  || ||||  |||||||||||||||||| ||| 
Sbjct: 1538 ccacttgttaaacccagataattccataaggccagttagtgcagctctcatgcgaagcac 1479

                                                                        
Query: 425  tgtcatcacactctcgaacaaaatccaaaatggcagaatgtgtatattttttggatgtct 484
             |||||||||||||| || || |||||||| ||||  ||||||| |||| |||||| |||
Sbjct: 1478 agtcatcacactctcaaataagatccaaaacggcattatgtgtagatttcttggatttct 1419

                                                                        
Query: 485  aatagctgtgaccactaaaagtaccgtgggaatatatgcgatgccccagactggtaggta 544
             || | |||||  |  | |||| || | ||||| || ||||  ||||||| ||||| | |
Sbjct: 1418 tatggttgtgataatcagaagtgccataggaatgtaggcgacaccccagattggtatgaa 1359

                                                                        
Query: 545  tagttctggtatcatgactgatatcggaactatgatattgtagagaatacatgcgaccgt 604
            ||| ||||| |||||||| || |  || |||||||| ||||| |||| ||| || ||| |
Sbjct: 1358 tagctctgggatcatgaccgacaaagggactatgatgttgtaaagaacacaggcaaccat 1299

                                                                        
Query: 605  aggggccacaactctccgaaccaagaagaagctatagagcatatggaatttcttgacaag 664
            |||||| ||||||||||| ||||| ||||||||||||||||||| ||| |||||||  ||
Sbjct: 1298 aggggctacaactctccgcaccaaaaagaagctatagagcatatagaacttcttgaggag 1239

                                                                        
Query: 665  agatacatccttggcagtcaaaatatcttttgctacctttcggaataaatgtgcaccacc 724
             |||| |||||||||   ||||| |||  |||||| |||||||||||| | |||||||||
Sbjct: 1238 cgatatatccttggctaccaaaacatccattgctatctttcggaataagtttgcaccacc 1179

                                             
Query: 725  acaagaccaccggaattgctgtcgacagtaggc 757
             || | |||||| ||||||||||||||||||||
Sbjct: 1178 gcaggcccaccgaaattgctgtcgacagtaggc 1146



 Score =  113 bits (57), Expect = 9e-22
 Identities = 117/137 (85%)
 Strand = Plus / Minus

                                                                        
Query: 164  aaatgctagtccttggagatagagattaaaatagtagctagtcttgccagggaatacaag 223
            ||||||||||||||||||||| |||||||||||||||||||| || ||| |||| | |||
Sbjct: 1739 aaatgctagtccttggagatacagattaaaatagtagctagttttcccatggaagataag 1680

                                                                        
Query: 224  gttgtatgacgcacagaagaaaagaaacgctgaaaataaaatctcacggaaattaaccct 283
            ||| ||||||||||||||||  |||||| | ||||||  ||||||  | | |||||  ||
Sbjct: 1679 gttatatgacgcacagaagatgagaaacaccgaaaatccaatctcgggaagattaattct 1620

                             
Query: 284  gtctcttaatcttttcc 300
            ||||||||| |||||||
Sbjct: 1619 gtctcttaaccttttcc 1603
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  105 bits (53), Expect = 2e-19
 Identities = 86/97 (88%)
 Strand = Plus / Minus

                                                                            
Query: 164      aaatgctagtccttggagatagagattaaaatagtagctagtcttgccagggaatacaag 223
                ||||||||||||||||||||| |||||||||||||||||||| || ||| |||| | |||
Sbjct: 26109495 aaatgctagtccttggagatacagattaaaatagtagctagttttcccatggaagataag 26109436

                                                     
Query: 224      gttgtatgacgcacagaagaaaagaaacgctgaaaat 260
                ||| ||||||||||||||||  |||||| | ||||||
Sbjct: 26109435 gttatatgacgcacagaagatgagaaacaccgaaaat 26109399



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 112/133 (84%)
 Strand = Plus / Minus

                                                                            
Query: 528      ccccagactggtaggtatagttctggtatcatgactgatatcggaactatgatattgtag 587
                ||||||| ||||| | |||| ||||| |||||||| || |  || |||||||| ||||| 
Sbjct: 26108944 ccccagattggtatgaatagctctgggatcatgaccgacaaagggactatgatgttgtaa 26108885

                                                                            
Query: 588      agaatacatgcgaccgtaggggccacaactctccgaaccaagaagaagctatagagcata 647
                |||| ||| || ||| ||||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 26108884 agaacacaggcaaccataggggctacaactctccgcaccaaaaagaagctatagagcata 26108825

                             
Query: 648      tggaatttcttga 660
                | ||| |||||||
Sbjct: 26108824 tagaacttcttga 26108812



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                            
Query: 694      ttgctacctttcggaataaatgtgcaccaccacaagaccaccggaattgctgtcgacagt 753
                |||||| |||||||||||| | ||||||||| || | |||||| ||||||||||||||||
Sbjct: 26108707 ttgctatctttcggaataagtttgcaccaccgcaggcccaccgaaattgctgtcgacagt 26108648

                    
Query: 754      aggc 757
                ||||
Sbjct: 26108647 aggc 26108644



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 90/109 (82%)
 Strand = Plus / Minus

                                                                            
Query: 365      ccactcgttaaactccgataattcgaatagaccagacagtgcagctctcatgcgatgcat 424
                ||||| ||||||| | |||||||| |  || ||||  |||||||||||||||||| ||| 
Sbjct: 26109202 ccacttgttaaacccagataattccataaggccagttagtgcagctctcatgcgaagcac 26109143

                                                                 
Query: 425      tgtcatcacactctcgaacaaaatccaaaatggcagaatgtgtatattt 473
                 |||||||||||||| || || |||||||| ||||  ||||||| ||||
Sbjct: 26109142 agtcatcacactctcaaataagatccaaaacggcattatgtgtagattt 26109094
to top
>dbj|AP004260.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0011H09
          Length = 147992

 Score =  105 bits (53), Expect = 2e-19
 Identities = 86/97 (88%)
 Strand = Plus / Minus

                                                                          
Query: 164    aaatgctagtccttggagatagagattaaaatagtagctagtcttgccagggaatacaag 223
              ||||||||||||||||||||| |||||||||||||||||||| || ||| |||| | |||
Sbjct: 143057 aaatgctagtccttggagatacagattaaaatagtagctagttttcccatggaagataag 142998

                                                   
Query: 224    gttgtatgacgcacagaagaaaagaaacgctgaaaat 260
              ||| ||||||||||||||||  |||||| | ||||||
Sbjct: 142997 gttatatgacgcacagaagatgagaaacaccgaaaat 142961



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 112/133 (84%)
 Strand = Plus / Minus

                                                                          
Query: 528    ccccagactggtaggtatagttctggtatcatgactgatatcggaactatgatattgtag 587
              ||||||| ||||| | |||| ||||| |||||||| || |  || |||||||| ||||| 
Sbjct: 142506 ccccagattggtatgaatagctctgggatcatgaccgacaaagggactatgatgttgtaa 142447

                                                                          
Query: 588    agaatacatgcgaccgtaggggccacaactctccgaaccaagaagaagctatagagcata 647
              |||| ||| || ||| ||||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 142446 agaacacaggcaaccataggggctacaactctccgcaccaaaaagaagctatagagcata 142387

                           
Query: 648    tggaatttcttga 660
              | ||| |||||||
Sbjct: 142386 tagaacttcttga 142374



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                          
Query: 694    ttgctacctttcggaataaatgtgcaccaccacaagaccaccggaattgctgtcgacagt 753
              |||||| |||||||||||| | ||||||||| || | |||||| ||||||||||||||||
Sbjct: 142269 ttgctatctttcggaataagtttgcaccaccgcaggcccaccgaaattgctgtcgacagt 142210

                  
Query: 754    aggc 757
              ||||
Sbjct: 142209 aggc 142206



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 90/109 (82%)
 Strand = Plus / Minus

                                                                          
Query: 365    ccactcgttaaactccgataattcgaatagaccagacagtgcagctctcatgcgatgcat 424
              ||||| ||||||| | |||||||| |  || ||||  |||||||||||||||||| ||| 
Sbjct: 142764 ccacttgttaaacccagataattccataaggccagttagtgcagctctcatgcgaagcac 142705

                                                               
Query: 425    tgtcatcacactctcgaacaaaatccaaaatggcagaatgtgtatattt 473
               |||||||||||||| || || |||||||| ||||  ||||||| ||||
Sbjct: 142704 agtcatcacactctcaaataagatccaaaacggcattatgtgtagattt 142656
to top
>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0519E12
          Length = 152448

 Score =  105 bits (53), Expect = 2e-19
 Identities = 86/97 (88%)
 Strand = Plus / Minus

                                                                        
Query: 164  aaatgctagtccttggagatagagattaaaatagtagctagtcttgccagggaatacaag 223
            ||||||||||||||||||||| |||||||||||||||||||| || ||| |||| | |||
Sbjct: 1353 aaatgctagtccttggagatacagattaaaatagtagctagttttcccatggaagataag 1294

                                                 
Query: 224  gttgtatgacgcacagaagaaaagaaacgctgaaaat 260
            ||| ||||||||||||||||  |||||| | ||||||
Sbjct: 1293 gttatatgacgcacagaagatgagaaacaccgaaaat 1257



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 112/133 (84%)
 Strand = Plus / Minus

                                                                       
Query: 528 ccccagactggtaggtatagttctggtatcatgactgatatcggaactatgatattgtag 587
           ||||||| ||||| | |||| ||||| |||||||| || |  || |||||||| ||||| 
Sbjct: 802 ccccagattggtatgaatagctctgggatcatgaccgacaaagggactatgatgttgtaa 743

                                                                       
Query: 588 agaatacatgcgaccgtaggggccacaactctccgaaccaagaagaagctatagagcata 647
           |||| ||| || ||| ||||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 742 agaacacaggcaaccataggggctacaactctccgcaccaaaaagaagctatagagcata 683

                        
Query: 648 tggaatttcttga 660
           | ||| |||||||
Sbjct: 682 tagaacttcttga 670



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                       
Query: 694 ttgctacctttcggaataaatgtgcaccaccacaagaccaccggaattgctgtcgacagt 753
           |||||| |||||||||||| | ||||||||| || | |||||| ||||||||||||||||
Sbjct: 565 ttgctatctttcggaataagtttgcaccaccgcaggcccaccgaaattgctgtcgacagt 506

               
Query: 754 aggc 757
           ||||
Sbjct: 505 aggc 502



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 90/109 (82%)
 Strand = Plus / Minus

                                                                        
Query: 365  ccactcgttaaactccgataattcgaatagaccagacagtgcagctctcatgcgatgcat 424
            ||||| ||||||| | |||||||| |  || ||||  |||||||||||||||||| ||| 
Sbjct: 1060 ccacttgttaaacccagataattccataaggccagttagtgcagctctcatgcgaagcac 1001

                                                             
Query: 425  tgtcatcacactctcgaacaaaatccaaaatggcagaatgtgtatattt 473
             |||||||||||||| || || |||||||| ||||  ||||||| ||||
Sbjct: 1000 agtcatcacactctcaaataagatccaaaacggcattatgtgtagattt 952
to top
>gb|AY111707.1| Zea mays CL16175_1 mRNA sequence
          Length = 592

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 140/172 (81%)
 Strand = Plus / Plus

                                                                       
Query: 477 ggatgtctaatagctgtgaccactaaaagtaccgtgggaatatatgcgatgccccagact 536
           |||||||| ||||||||||||||   ||| ||| |||||||||| || |  ||||| |||
Sbjct: 419 ggatgtcttatagctgtgaccacggtaagcaccatgggaatataggcaacaccccacact 478

                                                                       
Query: 537 ggtaggtatagttctggtatcatgactgatatcggaactatgatattgtagagaatacat 596
           |||||||| || || || ||  ||||||| || || |  |||| ||||||||||||||| 
Sbjct: 479 ggtaggtaaagctccgggattgtgactgagatggggatgatgacattgtagagaatacag 538

                                                               
Query: 597 gcgaccgtaggggccacaactctccgaaccaagaagaagctatagagcatat 648
           ||  |||| || || ||||||||||  || ||||||||||||||||||||||
Sbjct: 539 gcagccgtcggcgctacaactctcctcacaaagaagaagctatagagcatat 590



 Score = 42.1 bits (21), Expect = 2.7
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                    
Query: 195 tagtagctagtcttgccagggaatacaaggttgtatgacgcacagaagaaaagaaac 251
           |||||||| || || ||| |||| || ||||||||||| ||||||| ||| ||||||
Sbjct: 137 tagtagcttgttttcccatggaacaccaggttgtatgatgcacagaggaagagaaac 193
to top
>ref|XM_470723.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1725

 Score = 58.0 bits (29), Expect = 5e-05
 Identities = 63/73 (86%), Gaps = 1/73 (1%)
 Strand = Plus / Minus

                                                                        
Query: 701  ctttcggaataaatgtgcaccaccacaagaccaccggaattgctgtcgacagtaggcctt 760
            ||||||||| || | |||||| ||||||||||||||||| || ||||| ||||| | |||
Sbjct: 1128 ctttcggaacaagtttgcaccgccacaagaccaccggaactgttgtcggcagtatg-ctt 1070

                         
Query: 761  tgtaagtggatgg 773
            | |||||||||||
Sbjct: 1069 tataagtggatgg 1057



 Score = 48.1 bits (24), Expect = 0.044
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                        
Query: 168  gctagtccttggagatagagattaaaatagtagctagtcttgccagggaatacaaggttg 227
            |||| |||||||||||||||||| |  ||| ||||  |||| ||| |||| |||||||||
Sbjct: 1667 gctaatccttggagatagagatttatgtagaagctgttctttccatggaagacaaggttg 1608

                            
Query: 228  tatgacgcacagaaga 243
            || || ||||| ||||
Sbjct: 1607 taggatgcacaaaaga 1592



 Score = 48.1 bits (24), Expect = 0.044
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                        
Query: 581  attgtagagaatacatgcgaccgtaggggccacaactctccgaaccaagaagaagctata 640
            ||||||||||||| | || || | |||||| ||||||||||  |||| ||||||||||||
Sbjct: 1248 attgtagagaataaaggcaacagcaggggcaacaactctcctcaccaggaagaagctata 1189
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 58.0 bits (29), Expect = 5e-05
 Identities = 63/73 (86%), Gaps = 1/73 (1%)
 Strand = Plus / Plus

                                                                            
Query: 701      ctttcggaataaatgtgcaccaccacaagaccaccggaattgctgtcgacagtaggcctt 760
                ||||||||| || | |||||| ||||||||||||||||| || ||||| ||||| | |||
Sbjct: 14765690 ctttcggaacaagtttgcaccgccacaagaccaccggaactgttgtcggcagtatg-ctt 14765748

                             
Query: 761      tgtaagtggatgg 773
                | |||||||||||
Sbjct: 14765749 tataagtggatgg 14765761



 Score = 48.1 bits (24), Expect = 0.044
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                            
Query: 581      attgtagagaatacatgcgaccgtaggggccacaactctccgaaccaagaagaagctata 640
                ||||||||||||| | || || | |||||| ||||||||||  |||| ||||||||||||
Sbjct: 14765490 attgtagagaataaaggcaacagcaggggcaacaactctcctcaccaggaagaagctata 14765549



 Score = 48.1 bits (24), Expect = 0.044
 Identities = 63/76 (82%)
 Strand = Plus / Plus

                                                                            
Query: 168      gctagtccttggagatagagattaaaatagtagctagtcttgccagggaatacaaggttg 227
                |||| |||||||||||||||||| |  ||| ||||  |||| ||| |||| |||||||||
Sbjct: 14764861 gctaatccttggagatagagatttatgtagaagctgttctttccatggaagacaaggttg 14764920

                                
Query: 228      tatgacgcacagaaga 243
                || || ||||| ||||
Sbjct: 14764921 taggatgcacaaaaga 14764936
to top
>gb|AC084766.8| Oryza sativa chromosome 3 BAC OSJNBb0048D20 genomic sequence, complete
              sequence
          Length = 130306

 Score = 58.0 bits (29), Expect = 5e-05
 Identities = 63/73 (86%), Gaps = 1/73 (1%)
 Strand = Plus / Plus

                                                                          
Query: 701    ctttcggaataaatgtgcaccaccacaagaccaccggaattgctgtcgacagtaggcctt 760
              ||||||||| || | |||||| ||||||||||||||||| || ||||| ||||| | |||
Sbjct: 104602 ctttcggaacaagtttgcaccgccacaagaccaccggaactgttgtcggcagtatg-ctt 104660

                           
Query: 761    tgtaagtggatgg 773
              | |||||||||||
Sbjct: 104661 tataagtggatgg 104673



 Score = 48.1 bits (24), Expect = 0.044
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                          
Query: 581    attgtagagaatacatgcgaccgtaggggccacaactctccgaaccaagaagaagctata 640
              ||||||||||||| | || || | |||||| ||||||||||  |||| ||||||||||||
Sbjct: 104402 attgtagagaataaaggcaacagcaggggcaacaactctcctcaccaggaagaagctata 104461



 Score = 48.1 bits (24), Expect = 0.044
 Identities = 63/76 (82%)
 Strand = Plus / Plus

                                                                          
Query: 168    gctagtccttggagatagagattaaaatagtagctagtcttgccagggaatacaaggttg 227
              |||| |||||||||||||||||| |  ||| ||||  |||| ||| |||| |||||||||
Sbjct: 103773 gctaatccttggagatagagatttatgtagaagctgttctttccatggaagacaaggttg 103832

                              
Query: 228    tatgacgcacagaaga 243
              || || ||||| ||||
Sbjct: 103833 taggatgcacaaaaga 103848
to top
>tpg|BK000083.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) cellulose
            synthase-like A5 gene, complete cds
          Length = 5430

 Score = 58.0 bits (29), Expect = 5e-05
 Identities = 63/73 (86%), Gaps = 1/73 (1%)
 Strand = Plus / Minus

                                                                        
Query: 701  ctttcggaataaatgtgcaccaccacaagaccaccggaattgctgtcgacagtaggcctt 760
            ||||||||| || | |||||| ||||||||||||||||| || ||||| ||||| | |||
Sbjct: 3566 ctttcggaacaagtttgcaccgccacaagaccaccggaactgttgtcggcagtatg-ctt 3508

                         
Query: 761  tgtaagtggatgg 773
            | |||||||||||
Sbjct: 3507 tataagtggatgg 3495



 Score = 48.1 bits (24), Expect = 0.044
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                        
Query: 168  gctagtccttggagatagagattaaaatagtagctagtcttgccagggaatacaaggttg 227
            |||| |||||||||||||||||| |  ||| ||||  |||| ||| |||| |||||||||
Sbjct: 4395 gctaatccttggagatagagatttatgtagaagctgttctttccatggaagacaaggttg 4336

                            
Query: 228  tatgacgcacagaaga 243
            || || ||||| ||||
Sbjct: 4335 taggatgcacaaaaga 4320



 Score = 48.1 bits (24), Expect = 0.044
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                        
Query: 581  attgtagagaatacatgcgaccgtaggggccacaactctccgaaccaagaagaagctata 640
            ||||||||||||| | || || | |||||| ||||||||||  |||| ||||||||||||
Sbjct: 3766 attgtagagaataaaggcaacagcaggggcaacaactctcctcaccaggaagaagctata 3707
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 58.0 bits (29), Expect = 5e-05
 Identities = 63/73 (86%), Gaps = 1/73 (1%)
 Strand = Plus / Plus

                                                                            
Query: 701      ctttcggaataaatgtgcaccaccacaagaccaccggaattgctgtcgacagtaggcctt 760
                ||||||||| || | |||||| ||||||||||||||||| || ||||| ||||| | |||
Sbjct: 14760224 ctttcggaacaagtttgcaccgccacaagaccaccggaactgttgtcggcagtatg-ctt 14760282

                             
Query: 761      tgtaagtggatgg 773
                | |||||||||||
Sbjct: 14760283 tataagtggatgg 14760295



 Score = 48.1 bits (24), Expect = 0.044
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                            
Query: 581      attgtagagaatacatgcgaccgtaggggccacaactctccgaaccaagaagaagctata 640
                ||||||||||||| | || || | |||||| ||||||||||  |||| ||||||||||||
Sbjct: 14760024 attgtagagaataaaggcaacagcaggggcaacaactctcctcaccaggaagaagctata 14760083



 Score = 48.1 bits (24), Expect = 0.044
 Identities = 63/76 (82%)
 Strand = Plus / Plus

                                                                            
Query: 168      gctagtccttggagatagagattaaaatagtagctagtcttgccagggaatacaaggttg 227
                |||| |||||||||||||||||| |  ||| ||||  |||| ||| |||| |||||||||
Sbjct: 14759395 gctaatccttggagatagagatttatgtagaagctgttctttccatggaagacaaggttg 14759454

                                
Query: 228      tatgacgcacagaaga 243
                || || ||||| ||||
Sbjct: 14759455 taggatgcacaaaaga 14759470
to top
>dbj|AK111424.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-G12, full
            insert sequence
          Length = 2001

 Score = 58.0 bits (29), Expect = 5e-05
 Identities = 63/73 (86%), Gaps = 1/73 (1%)
 Strand = Plus / Minus

                                                                        
Query: 701  ctttcggaataaatgtgcaccaccacaagaccaccggaattgctgtcgacagtaggcctt 760
            ||||||||| || | |||||| ||||||||||||||||| || ||||| ||||| | |||
Sbjct: 1202 ctttcggaacaagtttgcaccgccacaagaccaccggaactgttgtcggcagtatg-ctt 1144

                         
Query: 761  tgtaagtggatgg 773
            | |||||||||||
Sbjct: 1143 tataagtggatgg 1131



 Score = 48.1 bits (24), Expect = 0.044
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                        
Query: 168  gctagtccttggagatagagattaaaatagtagctagtcttgccagggaatacaaggttg 227
            |||| |||||||||||||||||| |  ||| ||||  |||| ||| |||| |||||||||
Sbjct: 1741 gctaatccttggagatagagatttatgtagaagctgttctttccatggaagacaaggttg 1682

                            
Query: 228  tatgacgcacagaaga 243
            || || ||||| ||||
Sbjct: 1681 taggatgcacaaaaga 1666



 Score = 48.1 bits (24), Expect = 0.044
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                        
Query: 581  attgtagagaatacatgcgaccgtaggggccacaactctccgaaccaagaagaagctata 640
            ||||||||||||| | || || | |||||| ||||||||||  |||| ||||||||||||
Sbjct: 1322 attgtagagaataaaggcaacagcaggggcaacaactctcctcaccaggaagaagctata 1263
to top
>emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E (5 of 5)
          Length = 2199546

 Score = 48.1 bits (24), Expect = 0.044
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 279    accctgtctcttaatcttttcctt 302
              ||||||||||||||||||||||||
Sbjct: 457719 accctgtctcttaatcttttcctt 457742
to top
>dbj|AP006732.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT02K14, TM0918a,
             complete sequence
          Length = 48600

 Score = 48.1 bits (24), Expect = 0.044
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 34    ctaatgctatcatctgaaatgttt 57
             ||||||||||||||||||||||||
Sbjct: 34016 ctaatgctatcatctgaaatgttt 34039
to top
>gb|AC125816.8| Homo sapiens 12 BAC RP11-110A12 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 106140

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 287   tcttaatcttttccttgttttctgtaa 313
             |||||||||||||||| ||||||||||
Sbjct: 40111 tcttaatcttttcctttttttctgtaa 40085
to top
>gb|AC113590.11| Mus musculus chromosome 5, clone RP23-277L17, complete sequence
          Length = 171727

 Score = 44.1 bits (22), Expect = 0.69
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 295    ttttccttgttttctgtaacaa 316
              ||||||||||||||||||||||
Sbjct: 122150 ttttccttgttttctgtaacaa 122129
to top
>gb|AC125190.4| Mus musculus BAC clone RP23-288O24 from chromosome 13, complete
             sequence
          Length = 152080

 Score = 44.1 bits (22), Expect = 0.69
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 652   atttcttgacaagagatacatc 673
             ||||||||||||||||||||||
Sbjct: 55219 atttcttgacaagagatacatc 55240
to top
>gb|AC158126.7| Mus musculus chromosome 5, clone RP24-220P21, complete sequence
          Length = 166888

 Score = 44.1 bits (22), Expect = 0.69
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 295   ttttccttgttttctgtaacaa 316
             ||||||||||||||||||||||
Sbjct: 72392 ttttccttgttttctgtaacaa 72371
to top
>gb|AC164410.5| Mus musculus chromosome 5, clone RP23-6J21, complete sequence
          Length = 245837

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 638   atagagcatatggaatttctt 658
             |||||||||||||||||||||
Sbjct: 26607 atagagcatatggaatttctt 26587
to top
>gb|U39678.2| Caenorhabditis elegans cosmid C39D10, complete sequence
          Length = 40898

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 463  tgtgtatattttttggatgtc 483
            |||||||||||||||||||||
Sbjct: 3718 tgtgtatattttttggatgtc 3698
to top
>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete
              sequence
          Length = 1194300

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 205    tcttgccagggaatacaaggt 225
              |||||||||||||||||||||
Sbjct: 608106 tcttgccagggaatacaaggt 608086
to top
>gb|AC110217.10| Mus musculus chromosome 1, clone RP24-510P18, complete sequence
          Length = 132882

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 335   aaaattgttccctgttttctt 355
             |||||||||||||||||||||
Sbjct: 75705 aaaattgttccctgttttctt 75685
to top
>gb|AC148466.2| Xenopus tropicalis clone CH216-69C13, complete sequence
          Length = 177332

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 442   acaaaatccaaaatggcagaa 462
             |||||||||||||||||||||
Sbjct: 97186 acaaaatccaaaatggcagaa 97166
to top
>ref|XM_572358.1| Cryptococcus neoformans var. neoformans JEC21 arylformamidase
           (CNH01830) partial mRNA
          Length = 1433

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 205 tcttgccagggaatacaaggt 225
           |||||||||||||||||||||
Sbjct: 690 tcttgccagggaatacaaggt 710
to top
>gb|AC112261.4| Mus musculus BAC clone RP23-204O17 from 3, complete sequence
          Length = 186290

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 278    aaccctgtctcttaatcttttcctt 302
              ||||||||| |||||||||||||||
Sbjct: 109958 aaccctgtcccttaatcttttcctt 109934
to top
>gb|AF449447.1| Mus musculus C3H chromosome 3 hyplip1 region
          Length = 176641

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 278    aaccctgtctcttaatcttttcctt 302
              ||||||||| |||||||||||||||
Sbjct: 144814 aaccctgtcccttaatcttttcctt 144838
to top
>gb|AC009194.9| Homo sapiens, clone RP11-44B13, complete sequence
          Length = 179203

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 295   ttttccttgttttctgtaaca 315
             |||||||||||||||||||||
Sbjct: 11522 ttttccttgttttctgtaaca 11502
to top
>gb|AC010632.7| Homo sapiens chromosome 19 clone CTD-2293H3, complete sequence
          Length = 111221

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 295   ttttccttgttttctgtaaca 315
             |||||||||||||||||||||
Sbjct: 19536 ttttccttgttttctgtaaca 19556
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 40       ctatcatctgaaatgtttgaa 60
                |||||||||||||||||||||
Sbjct: 10972913 ctatcatctgaaatgtttgaa 10972893
to top
>gb|AE014845.1| Plasmodium falciparum 3D7 chromosome 12, section 2 of 9 of the complete
              sequence
          Length = 250531

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 319    gaacttcattattttcaaaat 339
              |||||||||||||||||||||
Sbjct: 238348 gaacttcattattttcaaaat 238328
to top
>emb|AL928951.17| Zebrafish DNA sequence from clone CH211-67N3, complete sequence
          Length = 183050

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 454   atggcagaatgtgtatatttt 474
             |||||||||||||||||||||
Sbjct: 86898 atggcagaatgtgtatatttt 86918
to top
>emb|AL355836.3|CNS05TCQ Human chromosome 14 DNA sequence BAC R-8L8 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 166894

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 336    aaattgttccctgttttcttt 356
              |||||||||||||||||||||
Sbjct: 134635 aaattgttccctgttttcttt 134655
to top
>gb|AC101547.9| Mus musculus chromosome 5, clone RP23-193C5, complete sequence
          Length = 185061

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 638   atagagcatatggaatttctt 658
             |||||||||||||||||||||
Sbjct: 94727 atagagcatatggaatttctt 94747
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 40       ctatcatctgaaatgtttgaa 60
                |||||||||||||||||||||
Sbjct: 10972612 ctatcatctgaaatgtttgaa 10972592
to top
>emb|AL954152.5|CNS08CCQ Oryza sativa chromosome 12, . BAC OSJNBb0034E16 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 124204

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 40     ctatcatctgaaatgtttgaa 60
              |||||||||||||||||||||
Sbjct: 121976 ctatcatctgaaatgtttgaa 121956
to top
>emb|AL844875.4|CNS08CAY Oryza sativa chromosome 12, . BAC OSJNBb0032I14 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 134082

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 40     ctatcatctgaaatgtttgaa 60
              |||||||||||||||||||||
Sbjct: 132662 ctatcatctgaaatgtttgaa 132682
to top
>gb|AC134523.5| Mus musculus BAC clone RP24-492M8 from 5, complete sequence
          Length = 178801

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 298    tccttgttttctgtaacaagg 318
              |||||||||||||||||||||
Sbjct: 168419 tccttgttttctgtaacaagg 168439


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9,308,827
Number of Sequences: 3902068
Number of extensions: 9308827
Number of successful extensions: 184720
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 184308
Number of HSP's gapped (non-prelim): 411
length of query: 781
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 758
effective length of database: 17,143,297,704
effective search space: 12994619659632
effective search space used: 12994619659632
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
to top