ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd27o14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GLGB_HAEIN (P45177) 1,4-alpha-glucan branching enzyme (EC 2.4.1.... 30 8.1

>GLGB_HAEIN (P45177) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen|
           branching enzyme) (BE)
           (1,4-alpha-D-glucan:1,4-alpha-D-glucan
           6-glucosyl-transferase)
          Length = 730

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 12/18 (66%), Positives = 16/18 (88%)
 Frame = -1

Query: 300 FASLGIHQHPQGLEIRTL 247
           FA+LG+H+  QG+EIRTL
Sbjct: 22  FATLGMHETEQGIEIRTL 39


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,590,659
Number of Sequences: 219361
Number of extensions: 1841948
Number of successful extensions: 4454
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 4360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4454
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6143359464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top