ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd27o14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_190233.1| Oryza sativa (japonica cultivar-group), predic... 56 1e-04
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
3dbj|AP003407.3| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
4dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
5dbj|AK104609.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
6dbj|AK064882.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
7dbj|AK064109.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
8ref|NM_190236.1| Oryza sativa (japonica cultivar-group), predic... 50 0.009
9ref|NM_118062.4| Arabidopsis thaliana carboxylic ester hydrolase... 46 0.14
10ref|NM_202846.1| Arabidopsis thaliana carboxylic ester hydrolase... 46 0.14
11gb|BT015714.1| Arabidopsis thaliana At4g19420 gene, complete cds 46 0.14
12gb|BT014978.1| Arabidopsis thaliana At4g19420 gene, complete cds 46 0.14
13emb|AL161550.2|ATCHRIV50 Arabidopsis thaliana DNA chromosome 4, ... 46 0.14
14emb|AL022580.1|ATT5K18 Arabidopsis thaliana DNA chromosome 4, BA... 46 0.14
15dbj|AK221987.1| Arabidopsis thaliana mRNA for pectinacetylestera... 46 0.14
16emb|BX826932.1|CNS0A3ZV Arabidopsis thaliana Full-length cDNA Co... 46 0.14
17emb|BX841613.1|CNS09YF2 Arabidopsis thaliana Full-length cDNA Co... 46 0.14
18gb|AC116106.18| Mus musculus chromosome 16, clone RP23-23D5, com... 44 0.57
19ref|XM_501966.1| Yarrowia lipolytica CLIB122, YALI0C18205g predi... 44 0.57
20gb|AC068812.13|AC068812 Homo sapiens chromosome N/A clone RP11-2... 44 0.57
21emb|AL121775.3|CNS01DSG Human chromosome 14 DNA sequence BAC R-5... 44 0.57
22emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 44 0.57
23gb|AC101593.16| Mus musculus chromosome 18, clone RP23-198A7, co... 42 2.2
24ref|NM_189490.1| Oryza sativa (japonica cultivar-group), predic... 42 2.2
25gb|AC002307.1|HUAC002307 Homo sapiens Chromosome 16 BAC clone CI... 42 2.2
26gb|AC133916.2| Homo sapiens chromosome 16 clone RP11-135K11, com... 42 2.2
27gb|AC138915.2| Homo sapiens chromosome 16 clone RP11-626K17, com... 42 2.2
28gb|AC138511.2| Homo sapiens chromosome 16 clone RP11-22F7, compl... 42 2.2
29gb|AC022272.6| Homo sapiens BAC clone RP11-563E2 from 4, complet... 42 2.2
30gb|AC149536.2| Xenopus tropicalis clone ISB-357A10, complete seq... 42 2.2
31gb|AC149149.3| Xenopus tropicalis clone ISB-175F5, complete sequ... 42 2.2
32gb|AC134305.3| Homo sapiens chromosome 16 clone RP11-105I8, comp... 42 2.2
33gb|AC073218.6| Homo sapiens BAC clone RP11-529E15 from 2, comple... 42 2.2
34gb|AC137800.3| Homo sapiens chromosome 16 clone RP11-652G5, comp... 42 2.2
35gb|AC136433.3| Homo sapiens chromosome 16 clone RP11-21C14, comp... 42 2.2
36gb|AY110511.1| Zea mays CL5312_1 mRNA sequence 42 2.2
37gb|AY106613.1| Zea mays PCO094715 mRNA sequence 42 2.2
38gb|AC136625.2| Homo sapiens chromosome 16 clone RP11-554I17, com... 42 2.2
39gb|AC136437.2| Homo sapiens chromosome 16 clone RP11-347D23, com... 42 2.2
40gb|AF147806.2| Gallid herpesvirus 2, complete genome 40 8.9
41gb|AC132413.3| Mus musculus BAC clone RP23-375I11 from chromosom... 40 8.9
42gb|AC121566.3| Mus musculus BAC clone RP23-225D10 from 1, comple... 40 8.9
43gb|AC116166.6| Homo sapiens chromosome 15, clone RP11-475F15, co... 40 8.9
44emb|BX649366.5| Zebrafish DNA sequence from clone DKEY-16I5 in l... 40 8.9
45dbj|AK127369.1| Homo sapiens cDNA FLJ45444 fis, clone BRSSN2012198 40 8.9
46gb|AC113435.14| Pan troglodytes clone rp43-153p22, complete sequ... 40 8.9
47gb|AC093835.3| Homo sapiens BAC clone RP11-425A23 from 4, comple... 40 8.9
48gb|AY510475.1| Gallid herpesvirus 2 clone Md11BAC replication in... 40 8.9
49gb|AC177809.2| Pan troglodytes BAC clone CH251-550E5 from chromo... 40 8.9
50emb|BX537269.8| Zebrafish DNA sequence from clone DKEY-181H1 in ... 40 8.9
51gb|AC090764.35| Homo sapiens chromosome 15, clone RP11-289D12, c... 40 8.9
52gb|AF243438.1|AF243438 Gallid herpesvirus 2 serotype 1 isolate M... 40 8.9
53gb|AC135069.17| Homo sapiens chromosome 15, clone RP11-1081C20, ... 40 8.9
54emb|AL670238.5| Mouse DNA sequence from clone RP23-16J5 on chrom... 40 8.9
55emb|CT571243.9| Mouse DNA sequence from clone RP23-122I21 on chr... 40 8.9
56gb|AC171204.1| Mus musculus BAC clone RP23-312J21 from chromosom... 40 8.9 
>ref|NM_190233.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1221

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 304  gcgtttggcagtgagtgaagcatgaatcaatgaaca 339
            ||||||| ||||| ||||||||||||||||||||||
Sbjct: 1060 gcgtttgacagtgggtgaagcatgaatcaatgaaca 1025



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 503 tatctgccatgaatcatacgcagagttgagaataaacatgggggtgcggatgctcttaa 561
           ||||||||| |||||||| |||||||| ||||||| | |||| | |  |||||||||||
Sbjct: 861 tatctgccaagaatcataagcagagttcagaataagcgtgggagcggtgatgctcttaa 803



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 165  catgttgggttgcacggatactggcagtcaatctctttcact 206
            ||||| ||||| || ||||||| |||||| ||||||||||||
Sbjct: 1199 catgtggggttacaaggatactcgcagtcgatctctttcact 1158
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                    
Query: 304      gcgtttggcagtgagtgaagcatgaatcaatgaaca 339
                ||||||| ||||| ||||||||||||||||||||||
Sbjct: 38794484 gcgtttgacagtgggtgaagcatgaatcaatgaaca 38794519



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                          
Query: 321      aagcatgaatcaatgaacatgcccca 346
                ||||||||||||||||||||||||||
Sbjct: 43059740 aagcatgaatcaatgaacatgcccca 43059765



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                  
Query: 304      gcgtttggcagtgagtgaagcatgaatcaatgaa 337
                ||||||| ||||||||||| ||||||||||||||
Sbjct: 38805922 gcgtttgacagtgagtgaaacatgaatcaatgaa 38805955



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                            
Query: 180      ggatactggcagtcaatctctttcactccttggctccttccaaagtaccaatctccaaca 239
                ||||||| |||||||||||||||||||  || ||| ||  |||| |||||||| ||||||
Sbjct: 38800845 ggatactcgcagtcaatctctttcactgttttgcttctctcaaaataccaatccccaaca 38800904

                     
Query: 240      acctt 244
                 ||||
Sbjct: 38800905 gcctt 38800909



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 306      gtttggcagtgagtgaagcatgaatcaatgaaca 339
                ||||| |||||  |||||||||||||||||||||
Sbjct: 38801076 gtttgacagtgcatgaagcatgaatcaatgaaca 38801109



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                          
Query: 165      catgttgggttgcacggatactggcagtcaatctctttcact 206
                ||||| ||||| || ||||||| |||||| ||||||||||||
Sbjct: 38794237 catgtggggttacaaggatactcgcagtcgatctctttcact 38794278



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 164      gcatgttgggttgcacggata 184
                |||||||||||||||||||||
Sbjct: 43059269 gcatgttgggttgcacggata 43059289
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>dbj|AP003407.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1078G07
          Length = 199457

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                 
Query: 304   gcgtttggcagtgagtgaagcatgaatcaatgaaca 339
             ||||||| ||||| ||||||||||||||||||||||
Sbjct: 67366 gcgtttgacagtgggtgaagcatgaatcaatgaaca 67401



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                               
Query: 304   gcgtttggcagtgagtgaagcatgaatcaatgaa 337
             ||||||| ||||||||||| ||||||||||||||
Sbjct: 78804 gcgtttgacagtgagtgaaacatgaatcaatgaa 78837



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                         
Query: 180   ggatactggcagtcaatctctttcactccttggctccttccaaagtaccaatctccaaca 239
             ||||||| |||||||||||||||||||  || ||| ||  |||| |||||||| ||||||
Sbjct: 73727 ggatactcgcagtcaatctctttcactgttttgcttctctcaaaataccaatccccaaca 73786

                  
Query: 240   acctt 244
              ||||
Sbjct: 73787 gcctt 73791



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 306   gtttggcagtgagtgaagcatgaatcaatgaaca 339
             ||||| |||||  |||||||||||||||||||||
Sbjct: 73958 gtttgacagtgcatgaagcatgaatcaatgaaca 73991



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 165   catgttgggttgcacggatactggcagtcaatctctttcact 206
             ||||| ||||| || ||||||| |||||| ||||||||||||
Sbjct: 67119 catgtggggttacaaggatactcgcagtcgatctctttcact 67160



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                     
Query: 506   ctgccatgaatcatacgcagagttgagaataaacatgggggtgcggatgctcttaa 561
             |||||| |||||||| |||||||| ||||||| | |||| | |  |||||||||||
Sbjct: 79229 ctgccaagaatcataagcagagttcagaataagcgtgggagcggtgatgctcttaa 79284



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                     
Query: 506   ctgccatgaatcatacgcagagttgagaataaacatgggggtgcggatgctcttaa 561
             |||||| |||||||| |||||||| ||||||| | |||| | |  |||||||||||
Sbjct: 68029 ctgccaagaatcataagcagagttcagaataagcgtgggagcggtgatgctcttaa 68084
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>dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0459B04
          Length = 142475

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                       
Query: 321   aagcatgaatcaatgaacatgcccca 346
             ||||||||||||||||||||||||||
Sbjct: 56769 aagcatgaatcaatgaacatgcccca 56794



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 164   gcatgttgggttgcacggata 184
             |||||||||||||||||||||
Sbjct: 56298 gcatgttgggttgcacggata 56318
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>dbj|AK104609.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C02, full
            insert sequence
          Length = 1456

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 304  gcgtttggcagtgagtgaagcatgaatcaatgaa 337
            ||||||| ||||||||||| ||||||||||||||
Sbjct: 1064 gcgtttgacagtgagtgaaacatgaatcaatgaa 1031



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                       
Query: 501 tgtatctgccatgaatcatacgcagagttgagaataaacatgggggtgcggatgctctta 560
           ||||||||||| |||||||| |||||||| ||||||| | |||| | |  ||||||||||
Sbjct: 867 tgtatctgccaagaatcataagcagagttcagaataagcgtgggagcggtgatgctctta 808

            
Query: 561 a 561
           |
Sbjct: 807 a 807
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>dbj|AK064882.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000K01, full
            insert sequence
          Length = 1434

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 304  gcgtttggcagtgagtgaagcatgaatcaatgaa 337
            ||||||| ||||||||||| ||||||||||||||
Sbjct: 1065 gcgtttgacagtgagtgaaacatgaatcaatgaa 1032



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                       
Query: 501 tgtatctgccatgaatcatacgcagagttgagaataaacatgggggtgcggatgctctta 560
           ||||||||||| |||||||| |||||||| ||||||| | |||| | |  ||||||||||
Sbjct: 868 tgtatctgccaagaatcataagcagagttcagaataagcgtgggagcggtgatgctctta 809

            
Query: 561 a 561
           |
Sbjct: 808 a 808
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>dbj|AK064109.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-G02, full
            insert sequence
          Length = 1483

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 321  aagcatgaatcaatgaacatgcccca 346
            ||||||||||||||||||||||||||
Sbjct: 1135 aagcatgaatcaatgaacatgcccca 1110



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 164  gcatgttgggttgcacggata 184
            |||||||||||||||||||||
Sbjct: 1289 gcatgttgggttgcacggata 1269
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>ref|NM_190236.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1275

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                       
Query: 501 tgtatctgccatgaatcatacgcagagttgagaataaacatgggggtgcggatgctctta 560
           ||||||||||| |||||||| |||||||| ||||||| | |||| | |  ||||||||||
Sbjct: 785 tgtatctgccaagaatcataagcagagttcagaataagcgtgggagcggtgatgctctta 726

            
Query: 561 a 561
           |
Sbjct: 725 a 725
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>ref|NM_118062.4| Arabidopsis thaliana carboxylic ester hydrolase AT4G19420 transcript
            variant AT4G19420.1 mRNA, complete cds
          Length = 1793

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 306  gtttggcagtgagtgaagcatgaatcaatgaacat 340
            ||||||||||||||| |||| ||||| ||||||||
Sbjct: 1274 gtttggcagtgagtgtagcaagaatctatgaacat 1240
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>ref|NM_202846.1| Arabidopsis thaliana carboxylic ester hydrolase AT4G19420 transcript
            variant AT4G19420.2 mRNA, complete cds
          Length = 1783

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 306  gtttggcagtgagtgaagcatgaatcaatgaacat 340
            ||||||||||||||| |||| ||||| ||||||||
Sbjct: 1264 gtttggcagtgagtgtagcaagaatctatgaacat 1230
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>gb|BT015714.1| Arabidopsis thaliana At4g19420 gene, complete cds
          Length = 1194

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 306  gtttggcagtgagtgaagcatgaatcaatgaacat 340
            ||||||||||||||| |||| ||||| ||||||||
Sbjct: 1013 gtttggcagtgagtgtagcaagaatctatgaacat 979
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>gb|BT014978.1| Arabidopsis thaliana At4g19420 gene, complete cds
          Length = 1685

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 306  gtttggcagtgagtgaagcatgaatcaatgaacat 340
            ||||||||||||||| |||| ||||| ||||||||
Sbjct: 1249 gtttggcagtgagtgtagcaagaatctatgaacat 1215
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>emb|AL161550.2|ATCHRIV50 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 50
          Length = 199382

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                 
Query: 306    gtttggcagtgagtgaagcatgaatcaatgaacat 340
              ||||||||||||||| |||| ||||| ||||||||
Sbjct: 171855 gtttggcagtgagtgtagcaagaatctatgaacat 171889
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>emb|AL022580.1|ATT5K18 Arabidopsis thaliana DNA chromosome 4, BAC clone T5K18 (ESSA project)
          Length = 90551

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 306   gtttggcagtgagtgaagcatgaatcaatgaacat 340
             ||||||||||||||| |||| ||||| ||||||||
Sbjct: 65804 gtttggcagtgagtgtagcaagaatctatgaacat 65838
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>dbj|AK221987.1| Arabidopsis thaliana mRNA for pectinacetylesterase like protein,
           partial cds, clone: RAFL22-60-I21
          Length = 889

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 306 gtttggcagtgagtgaagcatgaatcaatgaacat 340
           ||||||||||||||| |||| ||||| ||||||||
Sbjct: 408 gtttggcagtgagtgtagcaagaatctatgaacat 374
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>emb|BX826932.1|CNS0A3ZV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB78ZA02 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1692

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 306  gtttggcagtgagtgaagcatgaatcaatgaacat 340
            ||||||||||||||| |||| ||||| ||||||||
Sbjct: 1286 gtttggcagtgagtgtagcaagaatctatgaacat 1252
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>emb|BX841613.1|CNS09YF2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTSIL95ZA07 of Silique of strain col-0 of Arabidopsis
            thaliana (thale cress)
          Length = 1730

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 306  gtttggcagtgagtgaagcatgaatcaatgaacat 340
            ||||||||||||||| |||| ||||| ||||||||
Sbjct: 1291 gtttggcagtgagtgtagcaagaatctatgaacat 1257
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>gb|AC116106.18| Mus musculus chromosome 16, clone RP23-23D5, complete sequence
          Length = 252718

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 201    ttcactccttggctccttccaa 222
              ||||||||||||||||||||||
Sbjct: 154837 ttcactccttggctccttccaa 154816
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>ref|XM_501966.1| Yarrowia lipolytica CLIB122, YALI0C18205g predicted mRNA
          Length = 900

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 263 aagccttggggatgttggtgaa 284
           ||||||||||||||||||||||
Sbjct: 595 aagccttggggatgttggtgaa 574
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>gb|AC068812.13|AC068812 Homo sapiens chromosome N/A clone RP11-201E13, complete sequence
          Length = 177862

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 250   tgttcttatttccaagccttgg 271
             ||||||||||||||||||||||
Sbjct: 94010 tgttcttatttccaagccttgg 93989
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>emb|AL121775.3|CNS01DSG Human chromosome 14 DNA sequence BAC R-552K16 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 172576

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 250    tgttcttatttccaagccttgg 271
              ||||||||||||||||||||||
Sbjct: 139411 tgttcttatttccaagccttgg 139432
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>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 263     aagccttggggatgttggtgaa 284
               ||||||||||||||||||||||
Sbjct: 2504221 aagccttggggatgttggtgaa 2504242
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>gb|AC101593.16| Mus musculus chromosome 18, clone RP23-198A7, complete sequence
          Length = 206936

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 306   gtttggcagtgagtgaagcat 326
             |||||||||||||||||||||
Sbjct: 28279 gtttggcagtgagtgaagcat 28259
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>ref|NM_189490.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 876

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 164 gcatgttgggttgcacggata 184
           |||||||||||||||||||||
Sbjct: 837 gcatgttgggttgcacggata 817
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>gb|AC002307.1|HUAC002307 Homo sapiens Chromosome 16 BAC clone CIT987-SK37914  ~complete genomic
             sequence, complete sequence
          Length = 161580

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 217   ttccaaagtaccaatctccaacaac 241
             ||||||| |||||||||||||||||
Sbjct: 22024 ttccaaattaccaatctccaacaac 22048
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>gb|AC133916.2| Homo sapiens chromosome 16 clone RP11-135K11, complete sequence
          Length = 169142

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 217   ttccaaagtaccaatctccaacaac 241
             ||||||| |||||||||||||||||
Sbjct: 70749 ttccaaattaccaatctccaacaac 70773
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>gb|AC138915.2| Homo sapiens chromosome 16 clone RP11-626K17, complete sequence
          Length = 180893

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 217   ttccaaagtaccaatctccaacaac 241
             ||||||| |||||||||||||||||
Sbjct: 92244 ttccaaattaccaatctccaacaac 92268
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>gb|AC138511.2| Homo sapiens chromosome 16 clone RP11-22F7, complete sequence
          Length = 149037

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 217   ttccaaagtaccaatctccaacaac 241
             ||||||| |||||||||||||||||
Sbjct: 93286 ttccaaattaccaatctccaacaac 93262
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>gb|AC022272.6| Homo sapiens BAC clone RP11-563E2 from 4, complete sequence
          Length = 186535

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 37     caatccagtatactccctcca 57
              |||||||||||||||||||||
Sbjct: 136215 caatccagtatactccctcca 136235
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>gb|AC149536.2| Xenopus tropicalis clone ISB-357A10, complete sequence
          Length = 82647

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 333   atgaacatgccccatcctgcc 353
             |||||||||||||||||||||
Sbjct: 23689 atgaacatgccccatcctgcc 23669
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>gb|AC149149.3| Xenopus tropicalis clone ISB-175F5, complete sequence
          Length = 116498

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 333   atgaacatgccccatcctgcc 353
             |||||||||||||||||||||
Sbjct: 56375 atgaacatgccccatcctgcc 56395
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>gb|AC134305.3| Homo sapiens chromosome 16 clone RP11-105I8, complete sequence
          Length = 165873

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 217   ttccaaagtaccaatctccaacaac 241
             ||||||| |||||||||||||||||
Sbjct: 85567 ttccaaattaccaatctccaacaac 85591
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>gb|AC073218.6| Homo sapiens BAC clone RP11-529E15 from 2, complete sequence
          Length = 150263

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 229   aatctccaacaacctttgcaatgtt 253
             ||||||||||| |||||||||||||
Sbjct: 79473 aatctccaacagcctttgcaatgtt 79449
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>gb|AC137800.3| Homo sapiens chromosome 16 clone RP11-652G5, complete sequence
          Length = 196550

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 217    ttccaaagtaccaatctccaacaac 241
              ||||||| |||||||||||||||||
Sbjct: 183743 ttccaaattaccaatctccaacaac 183719
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>gb|AC136433.3| Homo sapiens chromosome 16 clone RP11-21C14, complete sequence
          Length = 164765

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 217   ttccaaagtaccaatctccaacaac 241
             ||||||| |||||||||||||||||
Sbjct: 56932 ttccaaattaccaatctccaacaac 56956
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>gb|AY110511.1| Zea mays CL5312_1 mRNA sequence
          Length = 1791

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 162 ttgcatgttgggttgcacggatactggcagtcaatct 198
           ||||| ||||||||||| |||||| |||| |||||||
Sbjct: 386 ttgcaagttgggttgcagggatacgggcaatcaatct 422
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>gb|AY106613.1| Zea mays PCO094715 mRNA sequence
          Length = 1106

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 162 ttgcatgttgggttgcacggatactggcagtcaatct 198
           ||||| ||||||||||| |||||| |||| |||||||
Sbjct: 754 ttgcaagttgggttgcagggatacgggcaatcaatct 718
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>gb|AC136625.2| Homo sapiens chromosome 16 clone RP11-554I17, complete sequence
          Length = 184294

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 217    ttccaaagtaccaatctccaacaac 241
              ||||||| |||||||||||||||||
Sbjct: 167407 ttccaaattaccaatctccaacaac 167383
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>gb|AC136437.2| Homo sapiens chromosome 16 clone RP11-347D23, complete sequence
          Length = 161397

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 217   ttccaaagtaccaatctccaacaac 241
             ||||||| |||||||||||||||||
Sbjct: 26357 ttccaaattaccaatctccaacaac 26381
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>gb|AF147806.2| Gallid herpesvirus 2, complete genome
          Length = 174077

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 533   aataaacatgggggtgcgga 552
             ||||||||||||||||||||
Sbjct: 79487 aataaacatgggggtgcgga 79506
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>gb|AC132413.3| Mus musculus BAC clone RP23-375I11 from chromosome 1, complete sequence
          Length = 191541

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 320    gaagcatgaatcaatgaaca 339
              ||||||||||||||||||||
Sbjct: 155973 gaagcatgaatcaatgaaca 155954
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>gb|AC121566.3| Mus musculus BAC clone RP23-225D10 from 1, complete sequence
          Length = 152435

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 320  gaagcatgaatcaatgaaca 339
            ||||||||||||||||||||
Sbjct: 7902 gaagcatgaatcaatgaaca 7883
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>gb|AC116166.6| Homo sapiens chromosome 15, clone RP11-475F15, complete sequence
          Length = 174164

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 535   taaacatgggggtgcggatg 554
             ||||||||||||||||||||
Sbjct: 20453 taaacatgggggtgcggatg 20434
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>emb|BX649366.5| Zebrafish DNA sequence from clone DKEY-16I5 in linkage group 12,
             complete sequence
          Length = 222310

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 565   tctctcagttggctccttgt 584
             ||||||||||||||||||||
Sbjct: 55222 tctctcagttggctccttgt 55203
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>dbj|AK127369.1| Homo sapiens cDNA FLJ45444 fis, clone BRSSN2012198
          Length = 2367

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 439 tattatccttgcaactcaac 458
           ||||||||||||||||||||
Sbjct: 721 tattatccttgcaactcaac 740
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>gb|AC113435.14| Pan troglodytes clone rp43-153p22, complete sequence
          Length = 161703

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 217    ttccaaagtaccaatctccaacaa 240
              ||||||| ||||||||||||||||
Sbjct: 109892 ttccaaattaccaatctccaacaa 109869
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>gb|AC093835.3| Homo sapiens BAC clone RP11-425A23 from 4, complete sequence
          Length = 197225

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 439   tattatccttgcaactcaac 458
             ||||||||||||||||||||
Sbjct: 34758 tattatccttgcaactcaac 34777
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>gb|AY510475.1| Gallid herpesvirus 2 clone Md11BAC replication intermediate, complete
             genome
          Length = 170950

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 533   aataaacatgggggtgcgga 552
             ||||||||||||||||||||
Sbjct: 91569 aataaacatgggggtgcgga 91588
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>gb|AC177809.2| Pan troglodytes BAC clone CH251-550E5 from chromosome 7, complete
             sequence
          Length = 180443

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 405   agaactttaatttgggttga 424
             ||||||||||||||||||||
Sbjct: 33372 agaactttaatttgggttga 33391
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>emb|BX537269.8| Zebrafish DNA sequence from clone DKEY-181H1 in linkage group 11,
            complete sequence
          Length = 73125

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 23   agtgaatattaacacaatcc 42
            ||||||||||||||||||||
Sbjct: 4540 agtgaatattaacacaatcc 4521
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>gb|AC090764.35| Homo sapiens chromosome 15, clone RP11-289D12, complete sequence
          Length = 137300

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 535    taaacatgggggtgcggatg 554
              ||||||||||||||||||||
Sbjct: 134760 taaacatgggggtgcggatg 134741
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>gb|AF243438.1|AF243438 Gallid herpesvirus 2 serotype 1 isolate Md5, complete genome
          Length = 177874

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 533   aataaacatgggggtgcgga 552
             ||||||||||||||||||||
Sbjct: 80991 aataaacatgggggtgcgga 81010
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>gb|AC135069.17| Homo sapiens chromosome 15, clone RP11-1081C20, complete sequence
          Length = 222726

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 535    taaacatgggggtgcggatg 554
              ||||||||||||||||||||
Sbjct: 113896 taaacatgggggtgcggatg 113877
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>emb|AL670238.5| Mouse DNA sequence from clone RP23-16J5 on chromosome X, complete
             sequence
          Length = 223392

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 371   caaatcattgatcattgtat 390
             ||||||||||||||||||||
Sbjct: 21806 caaatcattgatcattgtat 21787
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>emb|CT571243.9| Mouse DNA sequence from clone RP23-122I21 on chromosome 9, complete
              sequence
          Length = 158763

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 393    ctgaattcatcaagaacttt 412
              ||||||||||||||||||||
Sbjct: 131352 ctgaattcatcaagaacttt 131371
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>gb|AC171204.1| Mus musculus BAC clone RP23-312J21 from chromosome 9, complete sequence
          Length = 223399

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 393    ctgaattcatcaagaacttt 412
              ||||||||||||||||||||
Sbjct: 176185 ctgaattcatcaagaacttt 176204


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,784,087
Number of Sequences: 3902068
Number of extensions: 5784087
Number of successful extensions: 107541
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107350
Number of HSP's gapped (non-prelim): 191
length of query: 651
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 628
effective length of database: 17,143,297,704
effective search space: 10765990958112
effective search space used: 10765990958112
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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