Clone Name | rbasd27o08 |
---|---|
Clone Library Name | barley_pub |
>MIOX_ORYSA (Q5Z8T3) Probable inositol oxygenase (EC 1.13.99.1) (Myo-inositol| oxygenase) Length = 308 Score = 337 bits (864), Expect = 2e-92 Identities = 153/166 (92%), Positives = 158/166 (95%) Frame = -2 Query: 707 IHDLGKVLLHPSFGELPQWAVVGDTFPVGCAFDECNVHFKYLKENPDYHNPEFNTKFGVY 528 IHDLGKVLLHPSFGELPQW+VVGDTFPVGCAFDECNVHFKY KENPDY NP+ NTKFG Y Sbjct: 143 IHDLGKVLLHPSFGELPQWSVVGDTFPVGCAFDECNVHFKYFKENPDYLNPKLNTKFGAY 202 Query: 527 SEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEED 348 SEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAY HLMN+ED Sbjct: 203 SEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYMHLMNDED 262 Query: 347 KENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKLKW 210 KENLKWL VFNKYDLYSKS+ RIDVEKVKPYYMSLIEKYFP KL+W Sbjct: 263 KENLKWLRVFNKYDLYSKSNERIDVEKVKPYYMSLIEKYFPAKLRW 308
>MIOX5_ARATH (Q9FJU4) Inositol oxygenase 5 (EC 1.13.99.1) (Myo-inositol| oxygenase 5) (AtMIOX5) Length = 314 Score = 310 bits (793), Expect = 4e-84 Identities = 140/166 (84%), Positives = 151/166 (90%) Frame = -2 Query: 707 IHDLGKVLLHPSFGELPQWAVVGDTFPVGCAFDECNVHFKYLKENPDYHNPEFNTKFGVY 528 IHDLGKVL P FG LPQWAVVGDTFPVGCAFDE NVH KY ENPD++NP++NTK G+Y Sbjct: 149 IHDLGKVLTLPQFGGLPQWAVVGDTFPVGCAFDESNVHHKYFMENPDFNNPKYNTKAGIY 208 Query: 527 SEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEED 348 SEGCGL+NVLMSWGHDDYMYLVAKEN +TLPS GLFIIRYHSFYPLHK GAYTHLMNEED Sbjct: 209 SEGCGLENVLMSWGHDDYMYLVAKENGSTLPSPGLFIIRYHSFYPLHKAGAYTHLMNEED 268 Query: 347 KENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKLKW 210 KENLKWLHVFNKYDLYSKS V ++VEKVKPYYMSLI+KYFPE L+W Sbjct: 269 KENLKWLHVFNKYDLYSKSKVHVNVEKVKPYYMSLIKKYFPENLRW 314
>MIOX1_ARATH (Q8L799) Inositol oxygenase 1 (EC 1.13.99.1) (Myo-inositol| oxygenase 1) (AtMIOX1) Length = 311 Score = 304 bits (779), Expect = 2e-82 Identities = 137/166 (82%), Positives = 149/166 (89%) Frame = -2 Query: 707 IHDLGKVLLHPSFGELPQWAVVGDTFPVGCAFDECNVHFKYLKENPDYHNPEFNTKFGVY 528 IHDLGKVLLH SFGELPQWAVVGDTFPVGCAFDE VH KY KENPDY NP +N+K+G+Y Sbjct: 146 IHDLGKVLLHSSFGELPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYDNPSYNSKYGIY 205 Query: 527 SEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEED 348 +EGCGLDNVLMSWGHDDYMYLVAKEN+TTLPSAGLFIIRYHSFY LHK AY HLMN ED Sbjct: 206 TEGCGLDNVLMSWGHDDYMYLVAKENQTTLPSAGLFIIRYHSFYALHKSEAYKHLMNNED 265 Query: 347 KENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKLKW 210 +EN+KWL VFNKYDLYSKS VR++VE+VKPYY+SL KYFP KLKW Sbjct: 266 RENMKWLKVFNKYDLYSKSKVRVNVEEVKPYYLSLTNKYFPSKLKW 311
>MIOX4_ARATH (Q8H1S0) Inositol oxygenase 4 (EC 1.13.99.1) (Myo-inositol| oxygenase 4) (AtMIOX4) Length = 317 Score = 303 bits (776), Expect = 3e-82 Identities = 137/166 (82%), Positives = 147/166 (88%) Frame = -2 Query: 707 IHDLGKVLLHPSFGELPQWAVVGDTFPVGCAFDECNVHFKYLKENPDYHNPEFNTKFGVY 528 IHDLGKV+ P FG LPQWAVVGDTFPVGCAFDE NVH KY ENPD+HN +NTK G+Y Sbjct: 152 IHDLGKVITLPQFGGLPQWAVVGDTFPVGCAFDESNVHHKYFVENPDFHNETYNTKNGIY 211 Query: 527 SEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEED 348 SEGCGL+NV+MSWGHDDYMYLVAKEN +TLPSAG FIIRYHSFYPLH G YTHLMNEED Sbjct: 212 SEGCGLNNVMMSWGHDDYMYLVAKENGSTLPSAGQFIIRYHSFYPLHTAGEYTHLMNEED 271 Query: 347 KENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKLKW 210 KENLKWLHVFNKYDLYSKS V +DVEKVKPYYMSLI+KYFPE L+W Sbjct: 272 KENLKWLHVFNKYDLYSKSKVHVDVEKVKPYYMSLIKKYFPENLRW 317
>MIOX2_ARATH (O82200) Inositol oxygenase 2 (EC 1.13.99.1) (Myo-inositol| oxygenase 2) (AtMIOX2) Length = 317 Score = 296 bits (758), Expect = 4e-80 Identities = 134/166 (80%), Positives = 147/166 (88%) Frame = -2 Query: 707 IHDLGKVLLHPSFGELPQWAVVGDTFPVGCAFDECNVHFKYLKENPDYHNPEFNTKFGVY 528 IHDLGKVLL P FG LPQWAVVGDTFPVGC FD N+H KY K N D +NP++NTK GVY Sbjct: 152 IHDLGKVLLLPEFGGLPQWAVVGDTFPVGCTFDSANIHHKYFKGNHDINNPKYNTKNGVY 211 Query: 527 SEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEED 348 +EGCGLDNVLMSWGHDDYMYLVAK+N TTLP AGLFIIRYHSFYPLHK GAYTHLMN+ED Sbjct: 212 TEGCGLDNVLMSWGHDDYMYLVAKKNGTTLPHAGLFIIRYHSFYPLHKAGAYTHLMNDED 271 Query: 347 KENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKLKW 210 +++LKWLHVFNKYDLYSKS V +DVE+VKPYY+SLI KYFP KLKW Sbjct: 272 RDDLKWLHVFNKYDLYSKSKVLVDVEQVKPYYISLINKYFPAKLKW 317
>MIOX_BRARE (Q4V8T0) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)| Length = 278 Score = 197 bits (502), Expect = 2e-50 Identities = 94/167 (56%), Positives = 118/167 (70%), Gaps = 1/167 (0%) Frame = -2 Query: 707 IHDLGKVLLHPSFGELPQWAVVGDTFPVGCAFDECNVHFKYLKE-NPDYHNPEFNTKFGV 531 IHD+GKV+ + PQWAVVGDT+PVGC F V E NPD NP NT+FG+ Sbjct: 115 IHDVGKVM---ALYSEPQWAVVGDTYPVGCKFQNSIVFRNSTFEGNPDGKNPAPNTEFGI 171 Query: 530 YSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEE 351 Y CGLD VLMSWGHD+Y+Y V K NK T+P GL++IR+HSFYP H +G Y HL NE+ Sbjct: 172 YEPQCGLDKVLMSWGHDEYLYRVMKFNKCTIPEEGLYMIRFHSFYPWHSNGDYMHLCNEK 231 Query: 350 DKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKLKW 210 D++ L W+ FNK+DLY+KS+ DVE++KPYY SLI+KY P L+W Sbjct: 232 DQQMLPWVKEFNKFDLYTKSTELPDVERLKPYYQSLIDKYCPGVLQW 278
>MIOX_PIG (Q8WN98) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)| (Aldehyde reductase-like 6) Length = 282 Score = 179 bits (453), Expect = 1e-44 Identities = 88/168 (52%), Positives = 114/168 (67%), Gaps = 2/168 (1%) Frame = -2 Query: 707 IHDLGKVLLHPSFGELPQWAVVGDTFPVGCAFDECNVHF--KYLKENPDYHNPEFNTKFG 534 +HDLGKVL+ GE PQWAVVGDTFPVGC + +V F ++NPD +P ++T+ G Sbjct: 119 LHDLGKVLVLA--GE-PQWAVVGDTFPVGCR-PQASVVFCDSTFQDNPDLQDPVYSTELG 174 Query: 533 VYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNE 354 +Y CGL+N LMSWGHD+YMY + K NK +LP +IIR+HSFYP H G Y L NE Sbjct: 175 MYQPHCGLENALMSWGHDEYMYQMMKFNKFSLPGEAFYIIRFHSFYPWHTGGDYRQLCNE 234 Query: 353 EDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKLKW 210 +D L W+ FNK+DLY+K S DV++++PYY LI+KY P L W Sbjct: 235 QDLAMLPWVQEFNKFDLYTKGSDMPDVDELRPYYQGLIDKYCPGVLCW 282
>MIOX_MOUSE (Q9QXN5) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)| (Aldehyde reductase-like 6) (Renal-specific oxidoreductase) Length = 285 Score = 177 bits (449), Expect = 3e-44 Identities = 84/168 (50%), Positives = 115/168 (68%), Gaps = 2/168 (1%) Frame = -2 Query: 707 IHDLGKVLLHPSFGELPQWAVVGDTFPVGCAFDECNVHF--KYLKENPDYHNPEFNTKFG 534 +HDLGK++ +GE PQWAVVGDTFPVGC + +V F ++NPD +P ++T+ G Sbjct: 122 LHDLGKIMA--LWGE-PQWAVVGDTFPVGCR-PQASVVFCDSTFQDNPDLQDPRYSTELG 177 Query: 533 VYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNE 354 +Y CGL+NVLMSWGHD+Y+Y + K NK +LPS ++IR+HSFYP H G Y L ++ Sbjct: 178 MYQPHCGLENVLMSWGHDEYLYQMMKFNKFSLPSEAFYMIRFHSFYPWHTGGDYRQLCSQ 237 Query: 353 EDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKLKW 210 +D + L W+ FNK+DLY+K DVE ++PYY LI+KY P L W Sbjct: 238 QDLDMLPWVQEFNKFDLYTKCPDLPDVESLRPYYQGLIDKYCPGTLSW 285
>MIOX_PONPY (Q5REY9) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)| Length = 285 Score = 176 bits (447), Expect = 5e-44 Identities = 87/168 (51%), Positives = 112/168 (66%), Gaps = 2/168 (1%) Frame = -2 Query: 707 IHDLGKVLLHPSFGELPQWAVVGDTFPVGCAFDECNVHF--KYLKENPDYHNPEFNTKFG 534 +HDLGKVL FGE PQWAVVGDTFPVGC + +V F ++NPD +P ++T+ G Sbjct: 122 LHDLGKVLA--LFGE-PQWAVVGDTFPVGCR-PQASVVFCDSTFQDNPDLQDPRYSTELG 177 Query: 533 VYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNE 354 +Y CGLD VLMSWGHD+YMY V K NK +LP ++IR+HSFYP H Y L ++ Sbjct: 178 MYQPHCGLDRVLMSWGHDEYMYQVMKFNKFSLPPEAFYMIRFHSFYPWHTGSDYQQLCSQ 237 Query: 353 EDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKLKW 210 +D L W+ FNK+DLY+K DV+K++PYY LI+KY P L W Sbjct: 238 QDLAMLPWVQEFNKFDLYTKCPDLPDVDKLRPYYQGLIDKYCPGILSW 285
>MIOX_HUMAN (Q9UGB7) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)| (Aldehyde reductase-like 6) (Renal-specific oxidoreductase) (Kidney-specific protein 32) Length = 285 Score = 176 bits (445), Expect = 8e-44 Identities = 87/168 (51%), Positives = 112/168 (66%), Gaps = 2/168 (1%) Frame = -2 Query: 707 IHDLGKVLLHPSFGELPQWAVVGDTFPVGCAFDECNVHF--KYLKENPDYHNPEFNTKFG 534 +HDLGKVL FGE PQWAVVGDTFPVGC + +V F ++NPD +P ++T+ G Sbjct: 122 LHDLGKVLA--LFGE-PQWAVVGDTFPVGCR-PQASVVFCDSTFQDNPDLQDPRYSTELG 177 Query: 533 VYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNE 354 +Y CGLD VLMSWGHD+YMY V K NK +LP ++IR+HSFYP H Y L ++ Sbjct: 178 MYQPHCGLDRVLMSWGHDEYMYQVMKFNKFSLPPEAFYMIRFHSFYPWHTGRDYQQLCSQ 237 Query: 353 EDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKLKW 210 +D L W+ FNK+DLY+K DV+K++PYY LI+KY P L W Sbjct: 238 QDLAMLPWVREFNKFDLYTKCPDLPDVDKLRPYYQGLIDKYCPGILSW 285
>MIOX_RAT (Q9QXN4) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)| (Aldehyde reductase-like 6) (Renal-specific oxidoreductase) (Kidney-specific protein 32) Length = 285 Score = 174 bits (440), Expect = 3e-43 Identities = 82/168 (48%), Positives = 115/168 (68%), Gaps = 2/168 (1%) Frame = -2 Query: 707 IHDLGKVLLHPSFGELPQWAVVGDTFPVGCAFDECNVHF--KYLKENPDYHNPEFNTKFG 534 +HDLGK+L +GE PQWAVVGDTFPVGC + +V F ++NPD +P ++T+ G Sbjct: 122 LHDLGKILA--LWGE-PQWAVVGDTFPVGCR-PQASVVFCDSTFQDNPDLQDPRYSTELG 177 Query: 533 VYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNE 354 +Y CGL+NVLMSWGHD+Y+Y + K NK +LPS +++R+HSFYP H G Y L ++ Sbjct: 178 MYQPHCGLENVLMSWGHDEYLYQMMKFNKFSLPSEAFYMVRFHSFYPWHTGGDYRQLCSQ 237 Query: 353 EDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKLKW 210 +D + L W+ FNK+DLY+K +V+ ++PYY LI+KY P L W Sbjct: 238 QDLDMLPWVQEFNKFDLYTKCPDLPEVKSLRPYYQGLIDKYCPGILSW 285
>TRUD_GEOMG (Q39R76) tRNA pseudouridine synthase D (EC 5.4.99.-) (tRNA-uridine| isomerase D) (tRNA pseudouridylate synthase D) Length = 404 Score = 34.3 bits (77), Expect = 0.38 Identities = 18/45 (40%), Positives = 23/45 (51%) Frame = -1 Query: 705 PRSGQGAAASQLRGASSVGSRR*HLPRGLRVRRMQRPLQVPQGEP 571 P +GA L A V LP GLR+ +RPL+VP G+P Sbjct: 325 PEGEEGALERSLLAAEGVEPASFDLPGGLRMEGERRPLRVPLGDP 369
>CSK_CHICK (P41239) Tyrosine-protein kinase CSK (EC 2.7.10.2) (C-SRC kinase)| Length = 450 Score = 32.3 bits (72), Expect = 1.5 Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 3/98 (3%) Frame = -2 Query: 515 GLDNVLMSWGHDDYMYLVAKENKTTL---PSAGLFIIRYHSFYPLHKHGAYTHLMNEEDK 345 G+ LM W H + +E L P GLF++R + YP G YT ++ E K Sbjct: 74 GIKLSLMPWFHGK----ITREQAERLLYPPETGLFLVRESTNYP----GDYTLCVSCEGK 125 Query: 344 ENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKY 231 V + +YS S + ID E M L+E Y Sbjct: 126 -------VEHYRIIYSSSKLSIDEEVYFENLMQLVEHY 156
>SPB1_CRYNE (Q5KM86) AdoMet-dependent rRNA methyltransferase SPB1 (EC 2.1.1.-)| (2'-O-ribose RNA methyltransferase) (S-adenosyl-L-methionine-dependent methyltransferase) Length = 908 Score = 32.3 bits (72), Expect = 1.5 Identities = 20/64 (31%), Positives = 29/64 (45%) Frame = -2 Query: 413 RYHSFYPLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEK 234 R FY L K Y + K +H+ KYDL SK+ ID+ ++ + EK Sbjct: 12 RLDKFYRLAKEQGY------RARSAFKLVHLNRKYDLLSKARCCIDLCAAPGGWLQVAEK 65 Query: 233 YFPE 222 Y P+ Sbjct: 66 YMPK 69
>TOP1_RICPR (Q9ZDK2) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)| (Omega-protein) (Relaxing enzyme) (Untwisting enzyme) (Swivelase) Length = 776 Score = 30.4 bits (67), Expect = 5.5 Identities = 21/64 (32%), Positives = 33/64 (51%) Frame = -2 Query: 518 CGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEEDKEN 339 C ++NV+M D + +A ENK L A II + FY + Y +++ED+E+ Sbjct: 388 CQMENVIM----DLVIANLASENKEYLAKANGSIIAFDGFYKV-----YRESLDDEDEED 438 Query: 338 LKWL 327 K L Sbjct: 439 NKML 442
>RIN2_HUMAN (Q8WYP3) Ras and Rab interactor 2 (Ras interaction/interference| protein 2) (Ras inhibitor JC265) (Ras association domain family 4) Length = 895 Score = 30.0 bits (66), Expect = 7.2 Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 2/45 (4%) Frame = -2 Query: 347 KENLKWLHVFNKYDL--YSKSSVRIDVEKVKPYYMSLIEKYFPEK 219 KENL+ + N +L ++ + +DVEK+K +M++ + Y PEK Sbjct: 625 KENLQLVRQRNPQELGVFAPTPDFVDVEKIKVKFMTMQKMYSPEK 669
>GRPE_THEMA (Q9WZV4) Protein grpE (HSP-70 cofactor)| Length = 172 Score = 30.0 bits (66), Expect = 7.2 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = -2 Query: 374 YTHLMNEEDKENLKWLHVFNKYDLYSKSSV-RIDVEKVKPY 255 Y L+N +KE L +HV K+D + +V R++ E V+ Y Sbjct: 88 YKKLLNVLEKEGLTKIHVGEKFDPFEHEAVERVETEDVEEY 128 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 100,652,848 Number of Sequences: 219361 Number of extensions: 2131864 Number of successful extensions: 5780 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 5564 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5774 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7139613222 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)