ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd27o07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1FA18_ARATH (Q8LEK2) FAM18-like protein At1g09330 154 5e-56
2FA18_DROME (Q8IQC1) FAM18-like protein CG5021 64 5e-22
3FA18_DICDI (Q86I95) Hypothetical FAM18-like protein 64 9e-22
4FA18B_MOUSE (Q9D8T4) Protein FAM18B 60 2e-16
5FA18B_PONPY (Q5R9I4) Protein FAM18B 60 3e-16
6FA18B_HUMAN (Q9NYZ1) Protein FAM18B 60 1e-15
7TVP23_YEAST (P38962) TLG2-vesicle protein of 23 kDa 52 2e-13
8F18B2_HUMAN (Q96ET8) Protein FAM18B2 60 7e-11
9YGI5_SCHPO (Q9Y7K7) Hypothetical protein C2A9.05c in chromosome II 63 8e-10
10YC2L_CAEEL (Q18449) Hypothetical protein C34D4.4 in chromosome IV 61 3e-09
11YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor 33 0.70
12DPO3A_MYCGE (Q49405) DNA polymerase III alpha subunit (EC 2.7.7.7) 32 1.6
13WSC4_YEAST (P38739) Cell wall integrity and stress response comp... 31 3.5
14NHX7_ARATH (Q9LKW9) Sodium/hydrogen exchanger 7 (Na(+)/H(+) exch... 31 4.5
15PCLO_MOUSE (Q9QYX7) Protein piccolo (Aczonin) (Multidomain presy... 31 4.5

>FA18_ARATH (Q8LEK2) FAM18-like protein At1g09330|
          Length = 186

 Score =  154 bits (389), Expect(2) = 5e-56
 Identities = 75/105 (71%), Positives = 84/105 (80%)
 Frame = -1

Query: 595 GNSVWKFECLDGESLARMNKKDSWLFWWTLYLNAAAWIILAIFSLIRLEADYLLVVGVCL 416
           G SVWKFE LD ESLARMNKKDSWLFWWTLYL AAAW IL +FSLIR +ADYLLVVGVCL
Sbjct: 83  GESVWKFESLDQESLARMNKKDSWLFWWTLYLAAAAWFILGVFSLIRFQADYLLVVGVCL 142

Query: 415 TLSLANIVGFTKCNKDAKKNIRAFAENAAQNAITSRITSSLQSAF 281
           +L++ANI+GFTKC KDAKK  + F    A   I SR  S++QSAF
Sbjct: 143 SLNVANIIGFTKCKKDAKKQFQQF----ASQTIASRFQSTVQSAF 183



 Score = 84.0 bits (206), Expect(2) = 5e-56
 Identities = 39/44 (88%), Positives = 42/44 (95%)
 Frame = -3

Query: 731 SLFVKSFVIIFVITVLLAALDFWVVKNVSGRILVGLRWWNEIDD 600
           +LF  SFVIIFV+TVLLAALDFWVVKNVSGRILVGLRWWNEI+D
Sbjct: 38  ALFFNSFVIIFVVTVLLAALDFWVVKNVSGRILVGLRWWNEIND 81



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>FA18_DROME (Q8IQC1) FAM18-like protein CG5021|
          Length = 223

 Score = 63.9 bits (154), Expect(2) = 5e-22
 Identities = 26/43 (60%), Positives = 32/43 (74%)
 Frame = -3

Query: 725 FVKSFVIIFVITVLLAALDFWVVKNVSGRILVGLRWWNEIDDE 597
           F  SF+  FV  VL  + DFW VKN+SGR+LVGLRWWN +DD+
Sbjct: 61  FSDSFITSFVFVVLFLSADFWTVKNISGRLLVGLRWWNYVDDD 103



 Score = 60.5 bits (145), Expect(2) = 5e-22
 Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
 Frame = -1

Query: 598 NGNSVWKFECLDGESL-ARMNKKDSWLFWWTLYLNAAAWIILAIFSLIRLEADYLLVVGV 422
           +G S W FE  + ES  +R+NK +  +FW  L L    W +  +F+L  L+  +LL+V +
Sbjct: 103 DGVSHWVFESKNSESYQSRVNKNEQRIFWLGLILCPVFWGLFFLFALFGLKFKWLLLVMI 162

Query: 421 CLTLSLANIVGFTKCNKDAKKNIRAFA 341
            + L+ AN+ G+ KCN  A K++ + A
Sbjct: 163 AIALNAANLYGYVKCNYGANKDLNSAA 189



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>FA18_DICDI (Q86I95) Hypothetical FAM18-like protein|
          Length = 198

 Score = 64.3 bits (155), Expect(2) = 9e-22
 Identities = 32/101 (31%), Positives = 58/101 (57%)
 Frame = -1

Query: 610 RLTTNGNSVWKFECLDGESLARMNKKDSWLFWWTLYLNAAAWIILAIFSLIRLEADYLLV 431
           ++  +G + W FE +  +S  ++N  +S +FW  +    AAW + +I SL  L   +L+V
Sbjct: 95  QIKEDGTNNWVFESVQDKS--QVNPAESLMFWVPVLAFTAAWFVFSIISLFGLSFLWLVV 152

Query: 430 VGVCLTLSLANIVGFTKCNKDAKKNIRAFAENAAQNAITSR 308
             VC  L+ AN++G+ KC KDA+K ++  A++     I ++
Sbjct: 153 EIVCFLLAGANLLGYIKCAKDARKKVKGMAQSYIVGTIVNQ 193



 Score = 59.3 bits (142), Expect(2) = 9e-22
 Identities = 24/39 (61%), Positives = 31/39 (79%)
 Frame = -3

Query: 713 FVIIFVITVLLAALDFWVVKNVSGRILVGLRWWNEIDDE 597
           FV+ F+I  L +A DFWV KNV+GR LVGLRWWN+I ++
Sbjct: 61  FVLTFIIVTLSSAFDFWVTKNVTGRKLVGLRWWNQIKED 99



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>FA18B_MOUSE (Q9D8T4) Protein FAM18B|
          Length = 205

 Score = 60.1 bits (144), Expect(2) = 2e-16
 Identities = 24/44 (54%), Positives = 32/44 (72%)
 Frame = -3

Query: 728 LFVKSFVIIFVITVLLAALDFWVVKNVSGRILVGLRWWNEIDDE 597
           L   SF+   V  +LL + DFW VKNV+GR++VGLRWWN ID++
Sbjct: 56  LLSSSFIACMVTIILLLSCDFWAVKNVTGRLMVGLRWWNHIDED 99



 Score = 45.4 bits (106), Expect(2) = 2e-16
 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
 Frame = -1

Query: 598 NGNSVWKFECLDG--ESLARMNKKDSWLFWWTLYLNAAAWIILAIFSLIRLEADYLLVVG 425
           +G S W FE      +    +++ +S +FW  L      W+I A  +L      +L VV 
Sbjct: 99  DGKSHWVFESRKSTPQDNKTISEAESRIFWLGLIACPVLWVIFAFSALFSFRVKWLAVVI 158

Query: 424 VCLTLSLANIVGFTKCNKDAKKNIRAFA 341
           + + L  AN+ G+ +C   +KKN+ + A
Sbjct: 159 MGVVLQGANLYGYIRCKVGSKKNLTSMA 186



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>FA18B_PONPY (Q5R9I4) Protein FAM18B|
          Length = 205

 Score = 60.1 bits (144), Expect(2) = 3e-16
 Identities = 24/44 (54%), Positives = 32/44 (72%)
 Frame = -3

Query: 728 LFVKSFVIIFVITVLLAALDFWVVKNVSGRILVGLRWWNEIDDE 597
           L   SF+   V  +LL + DFW VKNV+GR++VGLRWWN ID++
Sbjct: 56  LLSSSFITCMVTIILLLSCDFWAVKNVTGRLMVGLRWWNHIDED 99



 Score = 45.1 bits (105), Expect(2) = 3e-16
 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
 Frame = -1

Query: 598 NGNSVWKFECLDGESLAR--MNKKDSWLFWWTLYLNAAAWIILAIFSLIRLEADYLLVVG 425
           +G S W FE     S     +++ +S +FW  L      W+I A  +L      +L VV 
Sbjct: 99  DGKSHWVFESRKESSQENKTVSEAESRIFWLGLIACPVLWVIFAFSALFSFRVKWLAVVI 158

Query: 424 VCLTLSLANIVGFTKCNKDAKKNIRAFA 341
           + + L  AN+ G+ +C   ++KN+ + A
Sbjct: 159 MGVVLQGANLYGYIRCKVGSRKNLTSMA 186



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>FA18B_HUMAN (Q9NYZ1) Protein FAM18B|
          Length = 205

 Score = 60.1 bits (144), Expect(2) = 1e-15
 Identities = 24/44 (54%), Positives = 32/44 (72%)
 Frame = -3

Query: 728 LFVKSFVIIFVITVLLAALDFWVVKNVSGRILVGLRWWNEIDDE 597
           L   SF+   V  +LL + DFW VKNV+GR++VGLRWWN ID++
Sbjct: 56  LLSSSFITCMVTIILLLSCDFWAVKNVTGRLMVGLRWWNHIDED 99



 Score = 42.7 bits (99), Expect(2) = 1e-15
 Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
 Frame = -1

Query: 598 NGNSVWKFECLDGESLAR--MNKKDSWLFWWTLYLNAAAWIILAIFSLIRLEADYLLVVG 425
           +G S W FE     S     +++ +S +FW  L      W+I A  +L      +L VV 
Sbjct: 99  DGKSHWVFESRKESSQENKTVSEAESRIFWLGLIACPVLWVIFAFSALFSFRVKWLAVVI 158

Query: 424 VCLTLSLANIVGFTKCNKDAKKNIRAFA 341
           + + L  AN+ G+ +C   ++K++ + A
Sbjct: 159 MGVVLQGANLYGYIRCKVRSRKHLTSMA 186



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>TVP23_YEAST (P38962) TLG2-vesicle protein of 23 kDa|
          Length = 199

 Score = 52.0 bits (123), Expect(2) = 2e-13
 Identities = 22/58 (37%), Positives = 36/58 (62%)
 Frame = -1

Query: 544 MNKKDSWLFWWTLYLNAAAWIILAIFSLIRLEADYLLVVGVCLTLSLANIVGFTKCNK 371
           +N  DS LFWW++Y+    W + A+  L+RL+  YL++V V + L+  N  GF  C++
Sbjct: 101 INAIDSKLFWWSMYVTPVIWGVFAVLCLLRLKIFYLILVIVAMCLTAWNTYGFRCCDR 158



 Score = 43.1 bits (100), Expect(2) = 2e-13
 Identities = 20/44 (45%), Positives = 30/44 (68%)
 Frame = -3

Query: 731 SLFVKSFVIIFVITVLLAALDFWVVKNVSGRILVGLRWWNEIDD 600
           S+F+ +F   F+  VLL + DF++ KN++GR LV LRWW +  D
Sbjct: 38  SMFL-NFTPQFITVVLLLSFDFYLTKNITGRKLVQLRWWYDSTD 80



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>F18B2_HUMAN (Q96ET8) Protein FAM18B2|
          Length = 276

 Score = 60.1 bits (144), Expect(2) = 7e-11
 Identities = 24/44 (54%), Positives = 32/44 (72%)
 Frame = -3

Query: 728 LFVKSFVIIFVITVLLAALDFWVVKNVSGRILVGLRWWNEIDDE 597
           L   SF+   V  +LL + DFW VKNV+GR++VGLRWWN ID++
Sbjct: 56  LLSSSFITCMVTIILLLSCDFWAVKNVTGRLMVGLRWWNHIDED 99



 Score = 26.6 bits (57), Expect(2) = 7e-11
 Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = -1

Query: 598 NGNSVWKFECLDGESLAR--MNKKDSWLFWWTLYLNAAAWIILAIFSLIRLEADYL 437
           +G S W FE     S     +++ +S +FW  L   +  W+I A  +L      +L
Sbjct: 99  DGKSHWVFESRKESSQENKTVSEAESRIFWLGLIACSVLWVIFAFSALFSFTVKWL 154



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>YGI5_SCHPO (Q9Y7K7) Hypothetical protein C2A9.05c in chromosome II|
          Length = 219

 Score = 63.2 bits (152), Expect = 8e-10
 Identities = 34/100 (34%), Positives = 51/100 (51%)
 Frame = -1

Query: 598 NGNSVWKFECLDGESLARMNKKDSWLFWWTLYLNAAAWIILAIFSLIRLEADYLLVVGVC 419
           +G S+W FE  D       N  D   FW+ LYL    WIIL I ++IR E  +L +V V 
Sbjct: 113 DGESIWIFESADPSR--PRNAVDQKTFWYALYLYPFIWIILGIVAIIRFEFLWLALVAVA 170

Query: 418 LTLSLANIVGFTKCNKDAKKNIRAFAENAAQNAITSRITS 299
           + L+  N   +++C+KDAK+       ++  +   SR  S
Sbjct: 171 IGLTSVNTAAYSRCDKDAKRRWATELADSNSSGFVSRFLS 210



 Score = 56.2 bits (134), Expect = 1e-07
 Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
 Frame = -3

Query: 725 FVKSFVIIFVITVLLAALDFWVVKNVSGRILVGLRWWNE--IDDEW*QCVEVRVPRRGVS 552
           F  SF+++F++   L A+D W VKNVSGR+LVGLRW NE  +D E     E   P R  +
Sbjct: 71  FTSSFMLLFIVIFTLLAVDLWTVKNVSGRLLVGLRWRNETGVDGESIWIFESADPSRPRN 130

Query: 551 RSDEQ 537
             D++
Sbjct: 131 AVDQK 135



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>YC2L_CAEEL (Q18449) Hypothetical protein C34D4.4 in chromosome IV|
          Length = 247

 Score = 61.2 bits (147), Expect = 3e-09
 Identities = 22/43 (51%), Positives = 34/43 (79%)
 Frame = -3

Query: 731 SLFVKSFVIIFVITVLLAALDFWVVKNVSGRILVGLRWWNEID 603
           + F  SF++ F++ + L ++DFW VKN++GR+LVGLRWWN +D
Sbjct: 94  NFFTNSFIVQFLVILTLLSMDFWTVKNITGRLLVGLRWWNFVD 136



 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 25/102 (24%), Positives = 52/102 (50%)
 Frame = -1

Query: 634 WSGFVGGMRLTTNGNSVWKFECLDGESLARMNKKDSWLFWWTLYLNAAAWIILAIFSLIR 455
           W  FV       +GN+ WKFE    + + R    D  +FW  L +  AAWI   + + + 
Sbjct: 131 WWNFVDA-----DGNNHWKFE--SAKDMTRFATIDRRVFWLGLVVGPAAWIFFVVTAFLT 183

Query: 454 LEADYLLVVGVCLTLSLANIVGFTKCNKDAKKNIRAFAENAA 329
           L+ ++++V  +   +++AN+ G+ +C  +  + + ++ +  A
Sbjct: 184 LKFEWMIVALLGALMNMANLWGYLRCRWNNTEQMTSYFQKWA 225



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>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor|
          Length = 374

 Score = 33.5 bits (75), Expect = 0.70
 Identities = 30/107 (28%), Positives = 39/107 (36%), Gaps = 1/107 (0%)
 Frame = +1

Query: 415 SSKLXXXXXXXXXXXXVKISQE*SMQQRSSKESTRTAMSLFCSSERETPRRGTRTSTHCY 594
           SS                 S   S    SS  S+ ++ S   SS    P   + +S+H  
Sbjct: 161 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSS 220

Query: 595 HSSSISFHQRSPTSILPLTFFTTQKSSAARSTV-MTKMMTKLFTKSE 732
            SSS S    S       +F TT  SS   STV +T   +   T SE
Sbjct: 221 SSSSSSSSSSSSRPSSSSSFITTMSSSTFISTVTVTPSSSSSSTSSE 267



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>DPO3A_MYCGE (Q49405) DNA polymerase III alpha subunit (EC 2.7.7.7)|
          Length = 874

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 8/112 (7%)
 Frame = -1

Query: 484 IILAIFSLIRLEADYLLVVGVCLTLSLANIVGFTKC--NKDAK---KNIRAFAENAAQNA 320
           I+   + ++  +   + +V V    SL     F +    KD K   KN R F E A QN 
Sbjct: 614 IVKNTYGVLIFQEQIINIVKVVANYSLEEADSFRRAISKKDVKLIQKNKRNFFERAVQNN 673

Query: 319 ITSRITSSLQS---AFGI*SPDYTEAQNYIQLCYLLSKISL*YPVFM*FWLI 173
              + T+ + S    F     + + A  Y  L Y  + +   YPV+   WL+
Sbjct: 674 FDLKTTTKIFSYIERFANYGFNLSHALGYALLSYWTAWLKTNYPVYFYLWLL 725



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>WSC4_YEAST (P38739) Cell wall integrity and stress response component 4|
           precursor
          Length = 605

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 30/78 (38%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
 Frame = +1

Query: 484 SMQQRSSKESTRTAMSLFCSSERETPRRGTRTSTHCYHSSS--ISFHQRSPTSILPLTFF 657
           S    SS  ST T  S    S   T    T TST    SSS   S    +PTS    TF 
Sbjct: 232 STSTSSSSSSTPTTTSSAPISTSTTSSTSTSTSTTSPTSSSAPTSSSNTTPTS---TTFT 288

Query: 658 TTQKSSAARSTVMTKMMT 711
           TT  S+A  ST +T   T
Sbjct: 289 TTSPSTAPSSTTVTYTST 306



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>NHX7_ARATH (Q9LKW9) Sodium/hydrogen exchanger 7 (Na(+)/H(+) exchanger 7)|
           (NHE-7) (Protein SALT OVERLY SENSITIVE 1)
          Length = 1146

 Score = 30.8 bits (68), Expect = 4.5
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = -3

Query: 710 VIIFVITVLLAALDFWVVKNVSGRILVGLRWWNEIDDE 597
           V + VI + L +L++    N+ G+I  G+R WNEID E
Sbjct: 63  VALLVIGIALGSLEYGAKHNL-GKIGHGIRIWNEIDPE 99



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>PCLO_MOUSE (Q9QYX7) Protein piccolo (Aczonin) (Multidomain presynaptic|
           cytomatrix protein) (Brain-derived HLMN protein)
          Length = 5038

 Score = 30.8 bits (68), Expect = 4.5
 Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 8/76 (10%)
 Frame = -2

Query: 402 QTSWGSPNATKMPRRTSELLLKMPLKTPSHPASHHP--------CSQHSASEVQITQRPK 247
           Q   G P+A +  +  S+ +   PL+ P   A+  P        C   + +E+ +    K
Sbjct: 458 QPGLGKPSAQQPSKSISQTVTGRPLQAPPTSAAQAPAQGLSKTICPLCNTTELLLHTPEK 517

Query: 246 ITYNCVTFCQRSACDI 199
             +N  T CQ + C +
Sbjct: 518 ANFNTCTECQSTVCSL 533


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,761,430
Number of Sequences: 219361
Number of extensions: 1926404
Number of successful extensions: 5998
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5997
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7649585595
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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