ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd27m23 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ310379.1|HVU310379 Hordeum vulgare mRNA for putative nuclear protein (s40 gene) Length = 417 Score = 799 bits (403), Expect = 0.0 Identities = 410/411 (99%), Gaps = 1/411 (0%) Strand = Plus / Minus Query: 194 tcacttctcgatgaatccggtcatcctgaggacgaggttcctgatattgcggaggtcccg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 417 tcacttctcgatgaatccggtcatcctgaggacgaggttcctgatattgcggaggtcccg 358 Query: 254 ccctttgagcgtcctccctttgccggtgcacatggagtaggccgccgtcgacctcccggc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 357 ccctttgagcgtcctccctttgccggtgcacatggagtaggccgccgtcgacctcccggc 298 Query: 314 gagcctccgccgtcgctcggccaggacgtggggcggcacgttcctcttcgcgtcgttggt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 297 gagcctccgccgtcgctcggccaggacgtggggcggcacgttcctcttcgcgtcgttggt 238 Query: 374 acatcggacgtcgccgtcgctgcagtcgtcgttgccactgccgctcccgtcggacgacgc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 acatcggacgtcgccgtcgctgcagtcgtcgttgccactgccgctcccgtcggacgacgc 178 Query: 434 cgtccaggatcgagaccgccgcttccggagaggcacgaggaccggggcagacagctccgg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177 cgtccaggatcgagaccgccgcttccggagaggcacgaggaccggggcagacagctccgg 118 Query: 494 cggggacaccttggcgatgtctccgtcgacgttgctgcccgtcgtcgccgtcgcggcggt 553 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 117 cggggacaccttggcgatgtctccgtcgacgttgctg-ccgtcgtcgccgtcgcggcggt 59 Query: 554 gctcggagttgtagtgtggccagaggacgtcggcttcttggagctcctgat 604 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58 gctcggagttgtagtgtggccagaggacgtcggcttcttggagctcctgat 8
>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E05, complete sequence Length = 196284 Score = 155 bits (78), Expect = 2e-34 Identities = 102/110 (92%) Strand = Plus / Minus Query: 193 ttcacttctcgatgaatccggtcatcctgaggacgaggttcctgatattgcggaggtccc 252 |||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 13006 ttcatttctcgatgaatccggtcatctggaggacgaggttcctgacgttgcggaggtccc 12947 Query: 253 gccctttgagcgtcctccctttgccggtgcacatggagtaggccgccgtc 302 ||||||||||||||||||| ||||||| |||||||||||| ||||||||| Sbjct: 12946 gccctttgagcgtcctccccttgccggcgcacatggagtacgccgccgtc 12897
>gb|AC111015.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1131_E09, complete sequence Length = 94399 Score = 155 bits (78), Expect = 2e-34 Identities = 102/110 (92%) Strand = Plus / Minus Query: 193 ttcacttctcgatgaatccggtcatcctgaggacgaggttcctgatattgcggaggtccc 252 |||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 79298 ttcatttctcgatgaatccggtcatctggaggacgaggttcctgacgttgcggaggtccc 79239 Query: 253 gccctttgagcgtcctccctttgccggtgcacatggagtaggccgccgtc 302 ||||||||||||||||||| ||||||| |||||||||||| ||||||||| Sbjct: 79238 gccctttgagcgtcctccccttgccggcgcacatggagtacgccgccgtc 79189
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 155 bits (78), Expect = 2e-34 Identities = 102/110 (92%) Strand = Plus / Minus Query: 193 ttcacttctcgatgaatccggtcatcctgaggacgaggttcctgatattgcggaggtccc 252 |||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 26161958 ttcatttctcgatgaatccggtcatctggaggacgaggttcctgacgttgcggaggtccc 26161899 Query: 253 gccctttgagcgtcctccctttgccggtgcacatggagtaggccgccgtc 302 ||||||||||||||||||| ||||||| |||||||||||| ||||||||| Sbjct: 26161898 gccctttgagcgtcctccccttgccggcgcacatggagtacgccgccgtc 26161849 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 571 ggccagaggacgtcggcttcttggagctcct 601 ||||||||||||||||||||||||| ||||| Sbjct: 25548306 ggccagaggacgtcggcttcttggaactcct 25548276
>dbj|AK109325.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-H07, full insert sequence Length = 744 Score = 155 bits (78), Expect = 2e-34 Identities = 102/110 (92%) Strand = Plus / Minus Query: 193 ttcacttctcgatgaatccggtcatcctgaggacgaggttcctgatattgcggaggtccc 252 |||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 475 ttcatttctcgatgaatccggtcatctggaggacgaggttcctgacgttgcggaggtccc 416 Query: 253 gccctttgagcgtcctccctttgccggtgcacatggagtaggccgccgtc 302 ||||||||||||||||||| ||||||| |||||||||||| ||||||||| Sbjct: 415 gccctttgagcgtcctccccttgccggcgcacatggagtacgccgccgtc 366
>ref|XM_475741.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 429 Score = 153 bits (77), Expect = 8e-34 Identities = 98/105 (93%) Strand = Plus / Minus Query: 198 ttctcgatgaatccggtcatcctgaggacgaggttcctgatattgcggaggtcccgccct 257 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 425 ttctcgatgaatccggtcatctggaggacgaggttcctgacgttgcggaggtcccgccct 366 Query: 258 ttgagcgtcctccctttgccggtgcacatggagtaggccgccgtc 302 |||||||||||||| ||||||| |||||||||||| ||||||||| Sbjct: 365 ttgagcgtcctccccttgccggcgcacatggagtacgccgccgtc 321
>gb|AY112488.1| Zea mays CL43678_1 mRNA sequence Length = 595 Score = 109 bits (55), Expect = 1e-20 Identities = 91/103 (88%) Strand = Plus / Plus Query: 200 ctcgatgaatccggtcatcctgaggacgaggttcctgatattgcggaggtcccgcccttt 259 ||||||||| || |||||| |||||||||||| || || | ||||||||| |||||||| Sbjct: 248 ctcgatgaagcctgtcatcttgaggacgaggtcccggacgtcgcggaggtcgcgcccttt 307 Query: 260 gagcgtcctccctttgccggtgcacatggagtaggccgccgtc 302 |||||||||||| ||||| | |||||||||||||||||||||| Sbjct: 308 gagcgtcctccccttgccagcgcacatggagtaggccgccgtc 350
>gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0599F04, complete sequence Length = 169073 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 571 ggccagaggacgtcggcttcttggagctcct 601 ||||||||||||||||||||||||| ||||| Sbjct: 64713 ggccagaggacgtcggcttcttggaactcct 64683
>ref|XM_477770.1| Oryza sativa (japonica cultivar-group), mRNA Length = 474 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 382 cgtcgccgtcgctgcagtcgtcgttgccact 412 ||||||||||||| |||||||||| |||||| Sbjct: 110 cgtcgccgtcgctccagtcgtcgtcgccact 80
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 382 cgtcgccgtcgctgcagtcgtcgttgccact 412 ||||||||||||| |||||||||| |||||| Sbjct: 14042424 cgtcgccgtcgctccagtcgtcgtcgccact 14042394
>dbj|AP003830.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1423_A11 Length = 98377 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 382 cgtcgccgtcgctgcagtcgtcgttgccact 412 ||||||||||||| |||||||||| |||||| Sbjct: 18383 cgtcgccgtcgctccagtcgtcgtcgccact 18353
>gb|AF158699.1|AF158699 Burkholderia cepacia D-serine deaminase (dsd), marR homolog, and major facilitator superfamily transporter homolog (ORFD) genes, complete cds; and unknown gene Length = 5527 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 520 cgacgttgctgcccgtcgtcgccgtcgcggc 550 ||||| |||||| |||||||||||||||||| Sbjct: 3978 cgacgctgctgctcgtcgtcgccgtcgcggc 3948
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 242 gcggaggtcccgccctttgagcgtcctccc 271 ||||||||| ||||| |||||||||||||| Sbjct: 760077 gcggaggtcgcgccccttgagcgtcctccc 760048 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 cagataaaattaattaattaa 54 ||||||||||||||||||||| Sbjct: 4155950 cagataaaattaattaattaa 4155970 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 382 cgtcgccgtcgctgcagtcgtcgt 405 ||||||||||||| |||||||||| Sbjct: 25509304 cgtcgccgtcgctccagtcgtcgt 25509327
>emb|AL035536.1|SPBC83 S.pombe chromosome II cosmid c83 Length = 37235 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 38 taaaattaattaattaaacaga 59 |||||||||||||||||||||| Sbjct: 31969 taaaattaattaattaaacaga 31990
>gb|AC008691.7| Homo sapiens chromosome 5 clone CTB-63A22, complete sequence Length = 153267 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 39 aaaattaattaattaaacagag 60 |||||||||||||||||||||| Sbjct: 133293 aaaattaattaattaaacagag 133272
>gb|AC011348.4| Homo sapiens chromosome 5 clone CTC-303E13, complete sequence Length = 110104 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 39 aaaattaattaattaaacagag 60 |||||||||||||||||||||| Sbjct: 24364 aaaattaattaattaaacagag 24343
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 533 cgtcgtcgccgtcgcggcggtgctcg 558 |||||||||||| ||||||||||||| Sbjct: 13229356 cgtcgtcgccgtggcggcggtgctcg 13229381 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 382 cgtcgccgtcgctgcagtcgtcgt 405 ||||||||||||| |||||||||| Sbjct: 15954056 cgtcgccgtcgctccagtcgtcgt 15954079
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 242 gcggaggtcccgccctttgagcgtcctccc 271 ||||||||| ||||| |||||||||||||| Sbjct: 760075 gcggaggtcgcgccccttgagcgtcctccc 760046 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 cagataaaattaattaattaa 54 ||||||||||||||||||||| Sbjct: 4156059 cagataaaattaattaattaa 4156079 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 382 cgtcgccgtcgctgcagtcgtcgt 405 ||||||||||||| |||||||||| Sbjct: 25600613 cgtcgccgtcgctccagtcgtcgt 25600636
>emb|BX248231.22| Zebrafish DNA sequence from clone CH211-137C4 in linkage group 8, complete sequence Length = 150101 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 cagataaaattaattaattaaa 55 |||||||||||||||||||||| Sbjct: 79038 cagataaaattaattaattaaa 79017
>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090O10, complete sequence Length = 162132 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 242 gcggaggtcccgccctttgagcgtcctccc 271 ||||||||| ||||| |||||||||||||| Sbjct: 55622 gcggaggtcgcgccccttgagcgtcctccc 55593
>gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0005F16, complete sequence Length = 160053 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 242 gcggaggtcccgccctttgagcgtcctccc 271 ||||||||| ||||| |||||||||||||| Sbjct: 145958 gcggaggtcgcgccccttgagcgtcctccc 145929
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 533 cgtcgtcgccgtcgcggcggtgctcg 558 |||||||||||| ||||||||||||| Sbjct: 146544 cgtcgtcgccgtggcggcggtgctcg 146569
>dbj|AK119700.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-D07, full insert sequence Length = 777 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 242 gcggaggtcccgccctttgagcgtcctccc 271 ||||||||| ||||| |||||||||||||| Sbjct: 655 gcggaggtcgcgccccttgagcgtcctccc 626
>dbj|AK107900.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-F07, full insert sequence Length = 804 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 242 gcggaggtcccgccctttgagcgtcctccc 271 ||||||||| ||||| |||||||||||||| Sbjct: 655 gcggaggtcgcgccccttgagcgtcctccc 626
>dbj|AK063497.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D06, full insert sequence Length = 1439 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 533 cgtcgtcgccgtcgcggcggtgctcg 558 |||||||||||| ||||||||||||| Sbjct: 375 cgtcgtcgccgtggcggcggtgctcg 400
>emb|Z78205.1|BHT1UL Bovine herpesvirus type 1 UL22-35 genes Length = 37000 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 283 acatggagtaggccgccgtcgacct 307 |||||||| |||||||||||||||| Sbjct: 17553 acatggagaaggccgccgtcgacct 17529
>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome Length = 135301 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 283 acatggagtaggccgccgtcgacct 307 |||||||| |||||||||||||||| Sbjct: 48353 acatggagaaggccgccgtcgacct 48329
>gb|AC117198.3| Mus musculus BAC clone RP23-127K18 from 9, complete sequence Length = 193044 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 ataaaattaattaattaaaca 57 ||||||||||||||||||||| Sbjct: 156609 ataaaattaattaattaaaca 156589
>emb|AL161421.11| Human DNA sequence from clone RP11-156K23 on chromosome 13 Contains the 5' end of a novel gene (containd FLJ31509 and KIAA0970), a RAD17 homolog (S. pombe) pseudogene and a CpG island, complete sequence Length = 151445 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 agataaaattaattaattaaa 55 ||||||||||||||||||||| Sbjct: 49820 agataaaattaattaattaaa 49840
>gb|AC074045.23| Homo sapiens Xp BAC RP11-60N3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 162381 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 agataaaattaattaattaaa 55 ||||||||||||||||||||| Sbjct: 147680 agataaaattaattaattaaa 147700
>gb|AC087723.3| Oryza sativa chromosome 10 clone OSJNBa0036D19, complete sequence Length = 144359 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 ataaaattaattaattaaaca 57 ||||||||||||||||||||| Sbjct: 77455 ataaaattaattaattaaaca 77435
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 385 cgccgtcgctgcagtcgtcgttgcc 409 |||||||||| |||||||||||||| Sbjct: 11615952 cgccgtcgctccagtcgtcgttgcc 11615976
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 ataaaattaattaattaaaca 57 ||||||||||||||||||||| Sbjct: 3644614 ataaaattaattaattaaaca 3644594 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 acagataaaattaattaatt 52 |||||||||||||||||||| Sbjct: 4292559 acagataaaattaattaatt 4292578
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 aattaattaattaaacagaga 61 ||||||||||||||||||||| Sbjct: 17664553 aattaattaattaaacagaga 17664533 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 513 tctccgtcgacgttgctgccc 533 ||||||||||||||||||||| Sbjct: 2800844 tctccgtcgacgttgctgccc 2800824
>gb|AC158158.6| Mus musculus chromosome 1, clone RP23-10D8, complete sequence Length = 193479 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 ataaaattaattaattaaaca 57 ||||||||||||||||||||| Sbjct: 174005 ataaaattaattaattaaaca 173985
>gb|AC079256.5| Homo sapiens BAC clone RP11-325I24 from 2, complete sequence Length = 156069 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 aattaattaattaaacagaga 61 ||||||||||||||||||||| Sbjct: 3122 aattaattaattaaacagaga 3142
>gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0050H14, complete sequence Length = 142245 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 cagataaaattaattaattaa 54 ||||||||||||||||||||| Sbjct: 56587 cagataaaattaattaattaa 56607
>dbj|AP005740.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0015A04 Length = 152058 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 513 tctccgtcgacgttgctgccc 533 ||||||||||||||||||||| Sbjct: 63993 tctccgtcgacgttgctgccc 63973
>gb|AC110266.15| Mus musculus chromosome 1, clone RP23-319C1, complete sequence Length = 177482 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 ataaaattaattaattaaaca 57 ||||||||||||||||||||| Sbjct: 81363 ataaaattaattaattaaaca 81343
>emb|BX640578.3| Mouse DNA sequence from clone RP23-261L3 on chromosome 2, complete sequence Length = 152285 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 ataaaattaattaattaaaca 57 ||||||||||||||||||||| Sbjct: 95792 ataaaattaattaattaaaca 95772
>emb|X94677.1|BHV1ULGNS Bovine herpesvirus type 1 genes for UL[27,28,29,30,31] Length = 10500 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 283 acatggagtaggccgccgtcgacct 307 |||||||| |||||||||||||||| Sbjct: 3277 acatggagaaggccgccgtcgacct 3253
>dbj|AP004397.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0436B06 Length = 148947 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 aattaattaattaaacagaga 61 ||||||||||||||||||||| Sbjct: 141203 aattaattaattaaacagaga 141183
>dbj|AP003962.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1705_C03 Length = 118339 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 aattaattaattaaacagaga 61 ||||||||||||||||||||| Sbjct: 49942 aattaattaattaaacagaga 49922
>emb|AL772241.27| Zebrafish DNA sequence from clone CH211-194M7 in linkage group 25, complete sequence Length = 154972 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 cagataaaattaattaattaa 54 ||||||||||||||||||||| Sbjct: 120224 cagataaaattaattaattaa 120204
>emb|CR376859.9| Zebrafish DNA sequence from clone CH211-197D4 in linkage group 10, complete sequence Length = 58467 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 ataaaattaattaattaaaca 57 ||||||||||||||||||||| Sbjct: 44842 ataaaattaattaattaaaca 44822
>emb|BX511097.21| Zebrafish DNA sequence from clone DKEYP-93C5 in linkage group 2, complete sequence Length = 134883 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 ataaaattaattaattaaaca 57 ||||||||||||||||||||| Sbjct: 13009 ataaaattaattaattaaaca 12989
>emb|CR556713.11| Zebrafish DNA sequence from clone DKEY-28O14 in linkage group 11, complete sequence Length = 229692 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 cagataaaattaattaattaa 54 ||||||||||||||||||||| Sbjct: 103909 cagataaaattaattaattaa 103929
>gb|AY395058.1| Schistosoma mansoni ecdysone-induced protein E78 (E78) mRNA, complete cds Length = 1864 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 401 gtcgttgccactgccgctccc 421 ||||||||||||||||||||| Sbjct: 1385 gtcgttgccactgccgctccc 1365
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 ataaaattaattaattaaaca 57 ||||||||||||||||||||| Sbjct: 3644535 ataaaattaattaattaaaca 3644515 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 acagataaaattaattaatt 52 |||||||||||||||||||| Sbjct: 4293380 acagataaaattaattaatt 4293399
>emb|AL663008.3|OSJN00209 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0058J09, complete sequence Length = 164911 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 385 cgccgtcgctgcagtcgtcgttgcc 409 |||||||||| |||||||||||||| Sbjct: 98962 cgccgtcgctccagtcgtcgttgcc 98986
>emb|CT025660.9| Mouse DNA sequence from clone RP24-79I19 on chromosome 9, complete sequence Length = 219226 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 ataaaattaattaattaaaca 57 ||||||||||||||||||||| Sbjct: 109055 ataaaattaattaattaaaca 109075
>gb|AC165281.2| Mus musculus BAC clone RP24-502H6 from chromosome 13, complete sequence Length = 225816 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 taaacagataaaattaattaa 50 ||||||||||||||||||||| Sbjct: 8173 taaacagataaaattaattaa 8153
>gb|AY067636.1| Schmidtea mediterranea clone H.27.10c unknown mRNA sequence Length = 561 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 31 aaacagataaaattaattaattaaa 55 |||||||||||| |||||||||||| Sbjct: 38 aaacagataaaagtaattaattaaa 14
>ref|XM_550259.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1929 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 cgtcgtcgccgtcgcggcgg 552 |||||||||||||||||||| Sbjct: 118 cgtcgtcgccgtcgcggcgg 99
>ref|XM_469110.1| Oryza sativa (japonica cultivar-group), mRNA Length = 357 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 cgtcgccgtcgctgcagtcgtcgt 405 ||||||||||||| |||||||||| Sbjct: 307 cgtcgccgtcgctccagtcgtcgt 284
>ref|NM_183749.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 648 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 382 cgtcgccgtcgctgcagtcgtcgttgcc 409 ||||||||||||| | |||||||||||| Sbjct: 552 cgtcgccgtcgctccggtcgtcgttgcc 525
>gb|AC159423.1| Trypanosoma brucei chromosome 8 clone RPCI93-26E13, complete sequence Length = 147087 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 acgttcctcttcgcgtcgtt 370 |||||||||||||||||||| Sbjct: 125414 acgttcctcttcgcgtcgtt 125395
>gb|AY022735.1| Oryza sativa microsatellite MRG5060 containing (CCT)X8, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 cgtcgtcgccgtcgcggcgg 552 |||||||||||||||||||| Sbjct: 22 cgtcgtcgccgtcgcggcgg 3
>gb|AC112209.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0030I09 map C83B, complete sequence Length = 123477 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 244 ggaggtcccgccctttgagcgtcctccc 271 ||||||| ||||| |||||||||||||| Sbjct: 99238 ggaggtcgcgccccttgagcgtcctccc 99265
>gb|AC159405.1| Trypanosoma brucei chromosome 8 clone RPCI93-11J15, complete sequence Length = 164873 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 acgttcctcttcgcgtcgtt 370 |||||||||||||||||||| Sbjct: 128027 acgttcctcttcgcgtcgtt 128046
>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence Length = 2481190 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 acgttcctcttcgcgtcgtt 370 |||||||||||||||||||| Sbjct: 1743163 acgttcctcttcgcgtcgtt 1743144
>gb|AC120237.5| Rattus norvegicus 1 BAC CH230-453N3 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 150760 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 agataaaattaattaattaa 54 |||||||||||||||||||| Sbjct: 68256 agataaaattaattaattaa 68275
>ref|XM_365538.1| Magnaporthe grisea 70-15 hypothetical protein (MG02240.4) partial mRNA Length = 3444 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 tcttcgcgtcgttggtacat 377 |||||||||||||||||||| Sbjct: 989 tcttcgcgtcgttggtacat 970
>ref|XM_955849.1| Neurospora crassa OR74A hypothetical protein (NCU01385.1) partial mRNA Length = 315 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 acgaggaccggggcagacag 487 |||||||||||||||||||| Sbjct: 280 acgaggaccggggcagacag 299
>ref|XM_326877.1| Neurospora crassa OR74A hypothetical protein (NCU01385.1) partial mRNA Length = 315 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 acgaggaccggggcagacag 487 |||||||||||||||||||| Sbjct: 280 acgaggaccggggcagacag 299
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 535 tcgtcgccgtcgcggcggtg 554 |||||||||||||||||||| Sbjct: 52187 tcgtcgccgtcgcggcggtg 52168
>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold Length = 1996640 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 ttgtctttcttcacctctgc 95 |||||||||||||||||||| Sbjct: 463320 ttgtctttcttcacctctgc 463339
>ref|XM_849855.1| PREDICTED: Canis familiaris similar to solute carrier family 39 (zinc transporter), member 3 isoform a (LOC612127), mRNA Length = 1129 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 gggcggcacgttcctcttcg 363 |||||||||||||||||||| Sbjct: 991 gggcggcacgttcctcttcg 1010
>ref|XM_818417.1| Trypanosoma brucei TREU927 clone RPCI93-11J15 hypothetical protein (Tb927.8.5940) partial mRNA Length = 1419 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 acgttcctcttcgcgtcgtt 370 |||||||||||||||||||| Sbjct: 735 acgttcctcttcgcgtcgtt 716
>emb|CR628387.12| Zebrafish DNA sequence from clone DKEY-59J17 in linkage group 17, complete sequence Length = 220664 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 aattaattaattaaacagag 60 |||||||||||||||||||| Sbjct: 210783 aattaattaattaaacagag 210802
>gb|AC124372.4| Mus musculus BAC clone RP24-556P17 from chromosome 16, complete sequence Length = 197211 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 ttaattaattaaacagagag 62 |||||||||||||||||||| Sbjct: 82826 ttaattaattaaacagagag 82845
>gb|AC122405.4| Mus musculus BAC clone RP24-119O6 from chromosome 12, complete sequence Length = 196285 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 32 aacagataaaattaattaattaaacaga 59 ||||||| ||||||||||| |||||||| Sbjct: 168058 aacagatgaaattaattaaataaacaga 168085
>ref|XM_757958.1| Theileria parva strain Muguga chromosome 3 hypothetical protein (TP03_0032) partial mRNA Length = 998 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 aacagataaaattaattaattaaa 55 |||| ||||||||||||||||||| Sbjct: 89 aacaaataaaattaattaattaaa 66
>gb|AC122172.30| Medicago truncatula clone mth2-27e7, complete sequence Length = 109532 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 19 ttaattttgattaaacagataaaattaattaa 50 |||||||| |||||| | |||||||||||||| Sbjct: 80186 ttaattttaattaaagaaataaaattaattaa 80217
>gb|AY333070.1| Drosophila virilis antennapedia (Antp), CG10013 (CG10013), CG31217 (CG31217), and ultrabithorax (Ubx) genes, complete cds Length = 308092 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 aaattaattaattaaacaga 59 |||||||||||||||||||| Sbjct: 272376 aaattaattaattaaacaga 272395
>emb|AL162417.23| Human DNA sequence from clone RP11-326L24 on chromosome 9q34.13-34.3 Contains the GTF3C5 gene for general transcription factor IIIC polypeptide 5 63kDa, the CEL gene for carboxyl ester lipase (bile salt-stimulated lipase), the CELP gene for carboxyl ester lipase pseudogene, the RALGDS gene for ral guanine nucleotide dissociation stimulator, the gene for Forssman glycolipid synthetase (FS), three novel genes and six CpG islands, complete sequence Length = 152863 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 tctcttgtctttcttcacct 91 |||||||||||||||||||| Sbjct: 144052 tctcttgtctttcttcacct 144033
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 gcccgtcgtcgccgtcgcgg 549 |||||||||||||||||||| Sbjct: 2176444 gcccgtcgtcgccgtcgcgg 2176425
>emb|AL136971.7| Human DNA sequence from clone RP3-322A2 on chromosome 6 Contains part of the ANKRD6 gene for ankyrin repeat domain 6 (KIAA0957), complete sequence Length = 82601 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 agataaaattaattaattaa 54 |||||||||||||||||||| Sbjct: 60924 agataaaattaattaattaa 60943
>emb|AL137843.4| Human DNA sequence from clone RP3-377O6 on chromosome Xq22.2-23 Contains a thyroid autoantigen 70kDa (Ku antigen) (G22P1) pseudogene, complete sequence Length = 133402 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 38 taaaattaattaattaaacagaga 61 ||||||||||| |||||||||||| Sbjct: 74392 taaaattaatttattaaacagaga 74415
>gb|AC157986.4| Mus musculus chromosome 19, clone RP23-160F18, complete sequence Length = 207504 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 30 taaacagataaaattaattaatta 53 ||||||||||||||||||| |||| Sbjct: 119419 taaacagataaaattaatttatta 119396
>emb|AL034582.11|HS594I10 Human DNA sequence from clone RP4-594I10 on chromosome 1p33-35.3 Contains the DSCR1L2 gene for Down syndrome critical region gene 1-like 2 and a CpG island, complete sequence Length = 46738 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 aaattaattaattaaacaga 59 |||||||||||||||||||| Sbjct: 34880 aaattaattaattaaacaga 34899
>gb|DQ145941.1| Homo sapiens globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (GBGT1) gene, complete cds Length = 14627 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 tctcttgtctttcttcacct 91 |||||||||||||||||||| Sbjct: 458 tctcttgtctttcttcacct 477
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 cgtcgccgtcgctgcagtcgtcgt 405 ||||||||||||||| |||||||| Sbjct: 150477 cgtcgccgtcgctgccgtcgtcgt 150454
>emb|AL451020.1|NC15E11 Neurospora crassa DNA linkage group V Cosmid contig 15E11 Length = 79133 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 acgaggaccggggcagacag 487 |||||||||||||||||||| Sbjct: 16736 acgaggaccggggcagacag 16717
>gb|AC131375.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0015J03, complete sequence Length = 165933 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 acagataaaattaattaatt 52 |||||||||||||||||||| Sbjct: 60100 acagataaaattaattaatt 60119
>emb|BX547996.10| Zebrafish DNA sequence from clone CH211-212H16 in linkage group 1, complete sequence Length = 213398 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 ataaaattaattaattaaac 56 |||||||||||||||||||| Sbjct: 20712 ataaaattaattaattaaac 20693
>emb|CR450720.5| Zebrafish DNA sequence from clone DKEYP-51F11 in linkage group 2, complete sequence Length = 200950 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tcttcacctctgctctcacc 102 |||||||||||||||||||| Sbjct: 51790 tcttcacctctgctctcacc 51771
>emb|BX323836.9| Zebrafish DNA sequence from clone CH211-249D6 in linkage group 13, complete sequence Length = 74669 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 attttgattaaacagataaa 41 |||||||||||||||||||| Sbjct: 34970 attttgattaaacagataaa 34951
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 ggacgacgccgtccaggatc 444 |||||||||||||||||||| Sbjct: 4359630 ggacgacgccgtccaggatc 4359611
>gb|AC068522.7| Homo sapiens chromosome 8, clone RP11-23K11, complete sequence Length = 146952 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 aacagataaaattaattaattaaa 55 |||| ||||||||||||||||||| Sbjct: 9173 aacaaataaaattaattaattaaa 9150
>gb|AC124906.3| Equus caballus clone CH241-268I16, complete sequence Length = 202908 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 aattttgattaaacagataaaatt 44 |||||| ||||||||||||||||| Sbjct: 163212 aattttaattaaacagataaaatt 163189
>gb|AC009927.10| Homo sapiens chromosome 8, clone RP11-114M5, complete sequence Length = 166985 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 aacagataaaattaattaattaaa 55 |||| ||||||||||||||||||| Sbjct: 109873 aacaaataaaattaattaattaaa 109850
>gb|AC007212.7| Arabidopsis thaliana chromosome 2 clone F8D23 map PhyB, complete sequence Length = 57550 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 aacagataaaattaattaat 51 |||||||||||||||||||| Sbjct: 34747 aacagataaaattaattaat 34728
>gb|AC013286.9| Homo sapiens chromosome 10 clone RP11-369F10, complete sequence Length = 178357 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 taaaattaattaattaaaca 57 |||||||||||||||||||| Sbjct: 4556 taaaattaattaattaaaca 4575
>gb|AC093255.2| Homo sapiens chromosome 5 clone RP11-181G6, complete sequence Length = 95597 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 agataaaattaattaattaa 54 |||||||||||||||||||| Sbjct: 15216 agataaaattaattaattaa 15197
>gb|AC091931.2| Homo sapiens chromosome 5 clone RP11-313L6, complete sequence Length = 185844 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 agataaaattaattaattaa 54 |||||||||||||||||||| Sbjct: 29767 agataaaattaattaattaa 29786
>gb|DQ399653.1| Nonomuraea longicatena K-252a biosynthesis gene cluster, complete sequence Length = 20300 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 532 ccgtcgtcgccgtcgcggcg 551 |||||||||||||||||||| Sbjct: 8121 ccgtcgtcgccgtcgcggcg 8102
>gb|AC154779.3| Mus musculus BAC clone RP24-461H19 from chromosome 17, complete sequence Length = 188929 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 30 taaacagataaaattaattaattaaaca 57 ||||||||||||||| | |||||||||| Sbjct: 157767 taaacagataaaattcagtaattaaaca 157794
>emb|BX664745.13| Zebrafish DNA sequence from clone DKEY-242A8 in linkage group 23, complete sequence Length = 261934 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 aaaattaattaattaaacag 58 |||||||||||||||||||| Sbjct: 151477 aaaattaattaattaaacag 151458
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 526 tgctgcccgtcgtcgccgtcgcgg 549 ||||||||| |||||||||||||| Sbjct: 3460502 tgctgcccgccgtcgccgtcgcgg 3460479
>gb|AC154359.2| Mus musculus BAC clone RP23-178L8 from chromosome 16, complete sequence Length = 212696 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 ttaattaattaaacagagag 62 |||||||||||||||||||| Sbjct: 132715 ttaattaattaaacagagag 132696
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 gacgtcgccgtcgctgcagt 399 |||||||||||||||||||| Sbjct: 24675444 gacgtcgccgtcgctgcagt 24675425 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 382 cgtcgccgtcgctgcagtcgtcgt 405 ||||||||||||| |||||||||| Sbjct: 6403069 cgtcgccgtcgctccagtcgtcgt 6403092
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 244 ggaggtcccgccctttgagcgtcctccc 271 ||||||| ||||| |||||||||||||| Sbjct: 2523166 ggaggtcgcgccccttgagcgtcctccc 2523139
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 cgtcgtcgccgtcgcggcgg 552 |||||||||||||||||||| Sbjct: 21350748 cgtcgtcgccgtcgcggcgg 21350729 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 533 cgtcgtcgccgtcgcggcgg 552 |||||||||||||||||||| Sbjct: 18867152 cgtcgtcgccgtcgcggcgg 18867171
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 382 cgtcgccgtcgctgcagtcgtcgttgcc 409 ||||||||||||| | |||||||||||| Sbjct: 13144754 cgtcgccgtcgctccggtcgtcgttgcc 13144781 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 382 cgtcgccgtcgctgcagtcgtcgttgcc 409 ||||||||||||| | |||||||||||| Sbjct: 12034390 cgtcgccgtcgctccggtcgtcgttgcc 12034363 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 cgtcgtcgccgtcgcggcgg 552 |||||||||||||||||||| Sbjct: 3500210 cgtcgtcgccgtcgcggcgg 3500191
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 539 cgccgtcgcggcggtgctcg 558 |||||||||||||||||||| Sbjct: 3171002 cgccgtcgcggcggtgctcg 3170983
>gb|AF321227.1|AF321227 Tribolium castaneum Ftz (ftz), Scr (scr), Dfd (dfd), Zen (zen), and Zen2 (zen2) genes, complete cds; and Pb (pb) gene, partial cds Length = 133406 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 19 ttaattttgattaaacagataaaattaattaa 50 |||||||| ||||||| |||||||||||||| Sbjct: 85719 ttaatttttattaaacctataaaattaattaa 85750
>gb|AC108034.2| Homo sapiens BAC clone RP11-137J16 from 4, complete sequence Length = 164396 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 aacagataaaattaattaattaaa 55 |||||||||||||| ||||||||| Sbjct: 88623 aacagataaaattacttaattaaa 88600
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 cggccaggacgtggggcggc 350 |||||||||||||||||||| Sbjct: 8457475 cggccaggacgtggggcggc 8457494
>gb|AC135600.3| Oryza sativa chromosome 3 BAC OSJNBb0047K21 genomic sequence, complete sequence Length = 117046 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 cgtcgccgtcgctgcagtcgtcgt 405 ||||||||||||| |||||||||| Sbjct: 25548 cgtcgccgtcgctccagtcgtcgt 25525
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 cgtcgtcgccgtcgcggcgg 552 |||||||||||||||||||| Sbjct: 2329441 cgtcgtcgccgtcgcggcgg 2329422
>gb|AC027689.10|AC027689 Homo sapiens chromosome 18 clone RP11-245A17, complete sequence Length = 180573 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 aaaattaattaattaaacag 58 |||||||||||||||||||| Sbjct: 163624 aaaattaattaattaaacag 163605
>dbj|AP005862.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0038K02 Length = 118635 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 cgtcgtcgccgtcgcggcgg 552 |||||||||||||||||||| Sbjct: 83127 cgtcgtcgccgtcgcggcgg 83108
>gb|AC145250.3| Macropus eugenii clone ME_KBa-232I1, complete sequence Length = 126347 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 ttgtctttcttcacctctgc 95 |||||||||||||||||||| Sbjct: 13277 ttgtctttcttcacctctgc 13296
>dbj|AP003339.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1276_B06 Length = 175174 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 cgtcgtcgccgtcgcggcgg 552 |||||||||||||||||||| Sbjct: 68278 cgtcgtcgccgtcgcggcgg 68259
>dbj|AP003208.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1158F07 Length = 139491 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 382 cgtcgccgtcgctgcagtcgtcgttgcc 409 ||||||||||||| | |||||||||||| Sbjct: 120475 cgtcgccgtcgctccggtcgtcgttgcc 120502
>dbj|AP003793.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0487E11 Length = 151303 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 382 cgtcgccgtcgctgcagtcgtcgttgcc 409 ||||||||||||| | |||||||||||| Sbjct: 17055 cgtcgccgtcgctccggtcgtcgttgcc 17082
>dbj|AP003414.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1153F04 Length = 158174 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 382 cgtcgccgtcgctgcagtcgtcgttgcc 409 ||||||||||||| | |||||||||||| Sbjct: 1330 cgtcgccgtcgctccggtcgtcgttgcc 1303
>dbj|AP004735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0031P18 Length = 156535 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 382 cgtcgccgtcgctgcagtcgtcgt 405 ||||||||||||| |||||||||| Sbjct: 87505 cgtcgccgtcgctccagtcgtcgt 87528
>dbj|AP003921.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0028G04 Length = 159761 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 382 cgtcgccgtcgctgcagtcgtcgttgcc 409 ||||||||||||| | |||||||||||| Sbjct: 80054 cgtcgccgtcgctccggtcgtcgttgcc 80027
>dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0026P23 Length = 180188 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 382 cgtcgccgtcgctgcagtcgtcgt 405 ||||||||||||| |||||||||| Sbjct: 167059 cgtcgccgtcgctccagtcgtcgt 167082
>gb|AC102722.7| Mus musculus chromosome 19, clone RP24-108O16, complete sequence Length = 141681 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 30 taaacagataaaattaattaatta 53 ||||||||||||||||||| |||| Sbjct: 20802 taaacagataaaattaatttatta 20825
>emb|AL929023.3| Zebrafish DNA sequence from clone DKEY-98G12 in linkage group 17, complete sequence Length = 198736 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 aattaattaattaaacagag 60 |||||||||||||||||||| Sbjct: 142712 aattaattaattaaacagag 142731
>dbj|AK120658.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158E21, full insert sequence Length = 1929 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 cgtcgtcgccgtcgcggcgg 552 |||||||||||||||||||| Sbjct: 118 cgtcgtcgccgtcgcggcgg 99
>gb|AC005040.2|AC005040 Homo sapiens BAC clone RP11-519H15 from 2, complete sequence Length = 189949 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 agataaaattaattaattaa 54 |||||||||||||||||||| Sbjct: 56169 agataaaattaattaattaa 56150
>dbj|AK072969.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144D16, full insert sequence Length = 964 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 244 ggaggtcccgccctttgagcgtcctccc 271 ||||||| ||||| |||||||||||||| Sbjct: 579 ggaggtcgcgccccttgagcgtcctccc 552
>gb|AC154388.4| Mus musculus BAC clone RP23-14P7 from chromosome 14, complete sequence Length = 246800 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 aaacagataaaattaattaattaa 54 ||||||| |||||||||||||||| Sbjct: 57029 aaacagagaaaattaattaattaa 57052
>dbj|AP002912.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0028E10 Length = 140791 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 cgtcgtcgccgtcgcggcgg 552 |||||||||||||||||||| Sbjct: 86970 cgtcgtcgccgtcgcggcgg 86951
>emb|AL929172.6| Zebrafish DNA sequence from clone DKEYP-46C10 in linkage group 25, complete sequence Length = 182666 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 agataaaattaattaattaa 54 |||||||||||||||||||| Sbjct: 72546 agataaaattaattaattaa 72565
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 244 ggaggtcccgccctttgagcgtcctccc 271 ||||||| ||||| |||||||||||||| Sbjct: 2532197 ggaggtcgcgccccttgagcgtcctccc 2532170
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 gacgtcgccgtcgctgcagt 399 |||||||||||||||||||| Sbjct: 24603650 gacgtcgccgtcgctgcagt 24603631 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 382 cgtcgccgtcgctgcagtcgtcgt 405 ||||||||||||| |||||||||| Sbjct: 6402944 cgtcgccgtcgctccagtcgtcgt 6402967
>emb|AL732649.3|CNS08C9O Oryza sativa chromosome 12, . BAC OSJNBb0067N05 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109555 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 382 cgtcgccgtcgctgcagtcgtcgt 405 ||||||||||||| |||||||||| Sbjct: 64617 cgtcgccgtcgctccagtcgtcgt 64640
>emb|AL954852.5|CNS08CD6 Oryza sativa chromosome 12, . BAC OJ1573_A06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 143895 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 gacgtcgccgtcgctgcagt 399 |||||||||||||||||||| Sbjct: 120310 gacgtcgccgtcgctgcagt 120291
>gb|AC133499.3| Mus musculus BAC clone RP24-248F14 from 8, complete sequence Length = 181064 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 aacagataaaattaattaattaaa 55 ||||||| |||||||||||||||| Sbjct: 113231 aacagattaaattaattaattaaa 113254
>gb|AC002319.1|AC002319 Homo sapiens chromosome 9q34, clone 70C11, complete sequence Length = 46305 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 tctcttgtctttcttcacct 91 |||||||||||||||||||| Sbjct: 19936 tctcttgtctttcttcacct 19955
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 tcgtcgttgccactgccgctcccg 422 |||||| ||||||||||||||||| Sbjct: 2945493 tcgtcgctgccactgccgctcccg 2945470
>dbj|AP007297.1| Lotus japonicus genomic DNA, clone:LjT02G13, TM0489a, complete sequence Length = 72531 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 taaaattaattaattaaaca 57 |||||||||||||||||||| Sbjct: 8906 taaaattaattaattaaaca 8925
>gb|DP000020.1| Equus caballus target 1 genomic scaffold Length = 1907055 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 aattttgattaaacagataaaatt 44 |||||| ||||||||||||||||| Sbjct: 1553669 aattttaattaaacagataaaatt 1553646
>emb|AJ233625.1|OCU233625 Oryctolagus cuniculus endogenous retroviral sequence ERV-L pol gene, clone ERV-L Rabbit1 Length = 303 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 122 ccacaagctttcacacacatccat 145 |||||||||||||||| ||||||| Sbjct: 271 ccacaagctttcacactcatccat 294
>gb|L23501.1|HUMKPRWI Homo sapiens Prader-Willi chromosome DNA fragment Length = 2965 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 317 cctccgccgtcgctcggccaggac 340 ||||||||||||||| |||||||| Sbjct: 2621 cctccgccgtcgctcagccaggac 2598
>dbj|AP005120.2| Homo sapiens genomic DNA, chromosome 18p clone:RP11-513M1, complete sequences Length = 125561 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 aaaattaattaattaaacag 58 |||||||||||||||||||| Sbjct: 31569 aaaattaattaattaaacag 31588 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,838,960 Number of Sequences: 3902068 Number of extensions: 4838960 Number of successful extensions: 185272 Number of sequences better than 10.0: 141 Number of HSP's better than 10.0 without gapping: 149 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 181543 Number of HSP's gapped (non-prelim): 3728 length of query: 606 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 583 effective length of database: 17,143,297,704 effective search space: 9994542561432 effective search space used: 9994542561432 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
