ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd27m22 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY107145.1| Zea mays PCO097814 mRNA sequence Length = 426 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Minus Query: 156 gctcagaagagcttttaacgggaggaggcgtccaacgggtggatgaggtaggtgagcacc 215 |||||||||||||| || ||| ||||||||||| |||||||||||||||||||||||| Sbjct: 286 gctcagaagagcttgtacggggcggaggcgtccagagggtggatgaggtaggtgagcacc 227 Query: 216 agcgccacgatcatcagaaggtaggcgacgccctggtcgatcgaagacgcgtcgctggtg 275 ||||||| ||||||||| ||||| |||| ||||||||| ||||| | | ||||||||||| Sbjct: 226 agcgccatgatcatcagcaggtacgcgatgccctggtcaatcgacgtcccgtcgctggtg 167 Query: 276 ggcgccggtgcgggggcctgcgcggcggcg 305 |||||||| ||||||||||||||||||||| Sbjct: 166 ggcgccggggcgggggcctgcgcggcggcg 137
>gb|AC108498.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1076_H08, complete sequence Length = 148348 Score = 103 bits (52), Expect = 5e-19 Identities = 79/88 (89%) Strand = Plus / Plus Query: 156 gctcagaagagcttttaacgggaggaggcgtccaacgggtggatgaggtaggtgagcacc 215 |||||||||||||| || |||||||||||| | |||||||||||||||||||||||| Sbjct: 89479 gctcagaagagcttgtaggcggaggaggcgtcgagagggtggatgaggtaggtgagcacc 89538 Query: 216 agcgccacgatcatcagaaggtaggcga 243 ||||||||||||||||| ||||| |||| Sbjct: 89539 agcgccacgatcatcagcaggtatgcga 89566
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 103 bits (52), Expect = 5e-19 Identities = 79/88 (89%) Strand = Plus / Plus Query: 156 gctcagaagagcttttaacgggaggaggcgtccaacgggtggatgaggtaggtgagcacc 215 |||||||||||||| || |||||||||||| | |||||||||||||||||||||||| Sbjct: 7134630 gctcagaagagcttgtaggcggaggaggcgtcgagagggtggatgaggtaggtgagcacc 7134689 Query: 216 agcgccacgatcatcagaaggtaggcga 243 ||||||||||||||||| ||||| |||| Sbjct: 7134690 agcgccacgatcatcagcaggtatgcga 7134717
>dbj|AK062517.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-C09, full insert sequence Length = 459 Score = 103 bits (52), Expect = 5e-19 Identities = 118/140 (84%) Strand = Plus / Minus Query: 156 gctcagaagagcttttaacgggaggaggcgtccaacgggtggatgaggtaggtgagcacc 215 |||||||||||||| || |||||||||||| | |||||||||||||||||||||||| Sbjct: 258 gctcagaagagcttgtaggcggaggaggcgtcgagagggtggatgaggtaggtgagcacc 199 Query: 216 agcgccacgatcatcagaaggtaggcgacgccctggtcgatcgaagacgcgtcgctggtg 275 ||||||||||||||||| ||||| |||| || || || | ||| | | ||||||||||| Sbjct: 198 agcgccacgatcatcagcaggtatgcgatcccttgatccaccgacgtcccgtcgctggtg 139 Query: 276 ggcgccggtgcgggggcctg 295 || | ||| ||||| ||||| Sbjct: 138 ggagacggcgcgggcgcctg 119
>ref|XM_476179.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 204 Score = 99.6 bits (50), Expect = 7e-18 Identities = 116/138 (84%) Strand = Plus / Minus Query: 158 tcagaagagcttttaacgggaggaggcgtccaacgggtggatgaggtaggtgagcaccag 217 |||||||||||| || |||||||||||| | |||||||||||||||||||||||||| Sbjct: 204 tcagaagagcttgtaggcggaggaggcgtcgagagggtggatgaggtaggtgagcaccag 145 Query: 218 cgccacgatcatcagaaggtaggcgacgccctggtcgatcgaagacgcgtcgctggtggg 277 ||||||||||||||| ||||| |||| || || || | ||| | | ||||||||||||| Sbjct: 144 cgccacgatcatcagcaggtatgcgatcccttgatccaccgacgtcccgtcgctggtggg 85 Query: 278 cgccggtgcgggggcctg 295 | ||| ||||| ||||| Sbjct: 84 agacggcgcgggcgcctg 67
>ref|XM_464586.1| Oryza sativa (japonica cultivar-group), mRNA Length = 201 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 201 aggtaggtgagcaccagcgccacgatcatcagaaggtaggcgacgccctggtcgatcg 258 |||||||||| || || |||||||||||||||| ||| |||| |||||||||||||| Sbjct: 191 aggtaggtgacgacgagagccacgatcatcagaatgtacgcgatgccctggtcgatcg 134
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 201 aggtaggtgagcaccagcgccacgatcatcagaaggtaggcgacgccctggtcgatcg 258 |||||||||| || || |||||||||||||||| ||| |||| |||||||||||||| Sbjct: 6153940 aggtaggtgacgacgagagccacgatcatcagaatgtacgcgatgccctggtcgatcg 6153997 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Minus Query: 326 gaggaggagcacggcggcggcga 348 ||||||||||||||||||||||| Sbjct: 6216999 gaggaggagcacggcggcggcga 6216977 Score = 42.1 bits (21), Expect = 1.4 Identities = 54/65 (83%) Strand = Plus / Plus Query: 195 tggatgaggtaggtgagcaccagcgccacgatcatcagaaggtaggcgacgccctggtcg 254 ||||| |||||||||||||| || ||||| | |||||| | ||| |||| ||| ||||| Sbjct: 9416240 tggattaggtaggtgagcacaagagccaccagcatcaggatgtatgcgatccccaggtcg 9416299 Query: 255 atcga 259 ||||| Sbjct: 9416300 atcga 9416304 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 324 gcgaggaggagcacggcggcggcg 347 |||||||||||| ||||||||||| Sbjct: 32980601 gcgaggaggagcgcggcggcggcg 32980578 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 gggaggaggcgtccaacggg 194 |||||||||||||||||||| Sbjct: 10299460 gggaggaggcgtccaacggg 10299479 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 320 gacggcgaggaggagcacggcggc 343 |||||||||||||||| ||||||| Sbjct: 5395300 gacggcgaggaggagctcggcggc 5395277
>dbj|AP003977.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1006_A02 Length = 175153 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 201 aggtaggtgagcaccagcgccacgatcatcagaaggtaggcgacgccctggtcgatcg 258 |||||||||| || || |||||||||||||||| ||| |||| |||||||||||||| Sbjct: 119422 aggtaggtgacgacgagagccacgatcatcagaatgtacgcgatgccctggtcgatcg 119479
>gb|AY105518.1| Zea mays PCO093357 mRNA sequence Length = 464 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 158 tcagaagagcttttaacgggaggaggcgtccaacgggtggatgaggtaggtgagcac 214 |||||||||||| || ||||||| ||||| | ||||||||| |||||||||||||| Sbjct: 405 tcagaagagcttgtagggggaggacgcgtcaagcgggtggatcaggtaggtgagcac 349
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Minus Query: 181 aggcgtccaacgggtggatgaggtaggtgagcaccagcgccacgatcatcag 232 ||||||||| ||| |||||||||||||||||||| || ||||| | |||||| Sbjct: 17768568 aggcgtccagcggatggatgaggtaggtgagcacaagggccaccagcatcag 17768517 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 cggtgcgggggcctgcgcggcggcg 305 ||||||||||||| ||||||||||| Sbjct: 11250620 cggtgcgggggcccgcgcggcggcg 11250644
>dbj|AP004743.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0026G06 Length = 123129 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Minus Query: 181 aggcgtccaacgggtggatgaggtaggtgagcaccagcgccacgatcatcag 232 ||||||||| ||| |||||||||||||||||||| || ||||| | |||||| Sbjct: 38990 aggcgtccagcggatggatgaggtaggtgagcacaagggccaccagcatcag 38939
>dbj|AK121505.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022N03, full insert sequence Length = 759 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Minus Query: 181 aggcgtccaacgggtggatgaggtaggtgagcaccagcgccacgatcatcag 232 ||||||||| ||| |||||||||||||||||||| || ||||| | |||||| Sbjct: 589 aggcgtccagcggatggatgaggtaggtgagcacaagggccaccagcatcag 538
>ref|NM_192440.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 210 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 158 tcagaagagcttttaacgggaggaggcgtccaacgggtggatgaggtaggtgagcaccag 217 |||||||||||| || |||||| || ||||| |||||||||||||||||||| | || Sbjct: 210 tcagaagagcttgtaggcggaggatgcatccaaggggtggatgaggtaggtgagggcaag 151 Query: 218 cgccacgatcatcag 232 ||||||| |||||| Sbjct: 150 tgccacgaacatcag 136
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 158 tcagaagagcttttaacgggaggaggcgtccaacgggtggatgaggtaggtgagcaccag 217 |||||||||||| || |||||| || ||||| |||||||||||||||||||| | || Sbjct: 26717773 tcagaagagcttgtaggcggaggatgcatccaaggggtggatgaggtaggtgagggcaag 26717714 Query: 218 cgccacgatcatcag 232 ||||||| |||||| Sbjct: 26717713 tgccacgaacatcag 26717699 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 326 gaggaggagcacggcggcggcg 347 |||||||||||||||||||||| Sbjct: 40916362 gaggaggagcacggcggcggcg 40916383 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 317 gaggacggcgaggaggagcacggcggcggc 346 |||||||||||||||||| |||||||||| Sbjct: 35821597 gaggacggcgaggaggagagcggcggcggc 35821626 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cggcatgaggacggcgagga 330 |||||||||||||||||||| Sbjct: 37634890 cggcatgaggacggcgagga 37634871 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 gacggcgaggaggagcacgg 339 |||||||||||||||||||| Sbjct: 32315539 gacggcgaggaggagcacgg 32315558 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 gcatgaggacggcgaggaggagca 336 |||||| ||||||||||||||||| Sbjct: 24663681 gcatgaagacggcgaggaggagca 24663704 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 321 acggcgaggaggagcacggcggcggcga 348 ||||||||| ||||| |||||||||||| Sbjct: 3090802 acggcgaggtggagctcggcggcggcga 3090829
>dbj|AP003294.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0694A04 Length = 141476 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 158 tcagaagagcttttaacgggaggaggcgtccaacgggtggatgaggtaggtgagcaccag 217 |||||||||||| || |||||| || ||||| |||||||||||||||||||| | || Sbjct: 64865 tcagaagagcttgtaggcggaggatgcatccaaggggtggatgaggtaggtgagggcaag 64806 Query: 218 cgccacgatcatcag 232 ||||||| |||||| Sbjct: 64805 tgccacgaacatcag 64791
>dbj|AK108727.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-C11, full insert sequence Length = 761 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 158 tcagaagagcttttaacgggaggaggcgtccaacgggtggatgaggtaggtgagcaccag 217 |||||||||||| || |||||| || ||||| |||||||||||||||||||| | || Sbjct: 357 tcagaagagcttgtaggcggaggatgcatccaaggggtggatgaggtaggtgagggcaag 298 Query: 218 cgccacgatcatcag 232 ||||||| |||||| Sbjct: 297 tgccacgaacatcag 283
>dbj|AK069678.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028A06, full insert sequence Length = 521 Score = 54.0 bits (27), Expect = 4e-04 Identities = 90/111 (81%) Strand = Plus / Minus Query: 195 tggatgaggtaggtgagcaccagcgccacgatcatcagaaggtaggcgacgccctggtcg 254 ||||| |||||||||||||| || ||||| | |||||| | ||| |||| ||| ||||| Sbjct: 267 tggattaggtaggtgagcacaagagccaccagcatcaggatgtatgcgatccccaggtcg 208 Query: 255 atcgaagacgcgtcgctggtgggcgccggtgcgggggcctgcgcggcggcg 305 ||||| | |||||||| |||||| || || ||||||||||| |||||| Sbjct: 207 atcgatgtgccgtcgctgacgggcgcgggcgccggggcctgcgccgcggcg 157
>ref|XM_470606.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1080 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 319 ggacggcgaggaggagcacggcg 341 ||||||||||||||||||||||| Sbjct: 220 ggacggcgaggaggagcacggcg 242
>ref|XM_464598.1| Oryza sativa (japonica cultivar-group), mRNA Length = 990 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 326 gaggaggagcacggcggcggcga 348 ||||||||||||||||||||||| Sbjct: 751 gaggaggagcacggcggcggcga 773
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Minus Query: 319 ggacggcgaggaggagcacggcg 341 ||||||||||||||||||||||| Sbjct: 6846149 ggacggcgaggaggagcacggcg 6846127
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Minus Query: 319 ggacggcgaggaggagcacggcg 341 ||||||||||||||||||||||| Sbjct: 6844046 ggacggcgaggaggagcacggcg 6844024
>gb|AC105927.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1781E12, complete sequence Length = 120392 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Minus Query: 319 ggacggcgaggaggagcacggcg 341 ||||||||||||||||||||||| Sbjct: 42084 ggacggcgaggaggagcacggcg 42062
>gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1017C11, complete sequence Length = 166072 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Minus Query: 319 ggacggcgaggaggagcacggcg 341 ||||||||||||||||||||||| Sbjct: 12746 ggacggcgaggaggagcacggcg 12724
>dbj|AP004085.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1267_F10 Length = 162669 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Minus Query: 326 gaggaggagcacggcggcggcga 348 ||||||||||||||||||||||| Sbjct: 14386 gaggaggagcacggcggcggcga 14364
>ref|NM_190483.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1356 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 317 gaggacggcgaggaggagcacggcggcggc 346 |||||||||||||||||| |||||||||| Sbjct: 380 gaggacggcgaggaggagagcggcggcggc 351
>ref|NM_190034.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 336 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 326 gaggaggagcacggcggcggcg 347 |||||||||||||||||||||| Sbjct: 51 gaggaggagcacggcggcggcg 30
>ref|XM_479238.1| Oryza sativa (japonica cultivar-group), mRNA Length = 971 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 326 gaggaggagcacggcggcggcg 347 |||||||||||||||||||||| Sbjct: 163 gaggaggagcacggcggcggcg 142
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 322 cggcgaggaggagcacggcggcggcg 347 |||||| ||||||||||||||||||| Sbjct: 7012298 cggcgacgaggagcacggcggcggcg 7012273 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 322 cggcgaggaggagcacggcggcggcg 347 |||||| ||||||||||||||||||| Sbjct: 6964486 cggcgacgaggagcacggcggcggcg 6964461 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 322 cggcgaggaggagcacggcggcggcg 347 |||||| ||||||||||||||||||| Sbjct: 6942035 cggcgacgaggagcacggcggcggcg 6942060 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 297 gcggcggcgagggccggcatg 317 ||||||||||||||||||||| Sbjct: 14313268 gcggcggcgagggccggcatg 14313288 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 cggtgcgggggcctgcgcggcggcg 305 ||||||||||||| ||||||||||| Sbjct: 12294305 cggtgcgggggcccgcgcggcggcg 12294281 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 cggcgaggaggagcacggcg 341 |||||||||||||||||||| Sbjct: 26633291 cggcgaggaggagcacggcg 26633272 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 317 gaggacggcgaggaggagcacggcggcg 344 ||||||| ||||||||||| |||||||| Sbjct: 24245579 gaggacgacgaggaggagcgcggcggcg 24245552
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 326 gaggaggagcacggcggcggcg 347 |||||||||||||||||||||| Sbjct: 26189114 gaggaggagcacggcggcggcg 26189093 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 319 ggacggcgaggaggagcacggcggcg 344 ||||||||||||| |||||||||||| Sbjct: 5055914 ggacggcgaggagaagcacggcggcg 5055889 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 cggcgaggaggagcacggcgg 342 ||||||||||||||||||||| Sbjct: 27096709 cggcgaggaggagcacggcgg 27096729 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 317 gaggacggcgaggaggagcacggcggcg 344 ||||||||||||||||| ||||||||| Sbjct: 8415017 gaggacggcgaggaggacgacggcggcg 8415044
>gb|AC010731.3| Homo sapiens BAC clone RP11-363B11 from 2, complete sequence Length = 128817 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 153 caggctcagaagagcttttaac 174 |||||||||||||||||||||| Sbjct: 23818 caggctcagaagagcttttaac 23797
>dbj|AP003272.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506E04 Length = 139934 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 326 gaggaggagcacggcggcggcg 347 |||||||||||||||||||||| Sbjct: 128468 gaggaggagcacggcggcggcg 128489
>dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423A12 Length = 178649 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 326 gaggaggagcacggcggcggcg 347 |||||||||||||||||||||| Sbjct: 44787 gaggaggagcacggcggcggcg 44808
>dbj|AP003271.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506B12 Length = 170759 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 317 gaggacggcgaggaggagcacggcggcggc 346 |||||||||||||||||| |||||||||| Sbjct: 86055 gaggacggcgaggaggagagcggcggcggc 86084
>dbj|AP005124.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0049I08 Length = 144379 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 319 ggacggcgaggaggagcacggcggcg 344 ||||||||||||| |||||||||||| Sbjct: 97603 ggacggcgaggagaagcacggcggcg 97578
>dbj|AP003743.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_E12 Length = 119691 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 319 ggacggcgaggaggagcacggcggcg 344 ||||||||||||| |||||||||||| Sbjct: 12081 ggacggcgaggagaagcacggcggcg 12056
>dbj|AP006615.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1165C09 Length = 202985 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 322 cggcgaggaggagcacggcggcggcg 347 |||||| ||||||||||||||||||| Sbjct: 130346 cggcgacgaggagcacggcggcggcg 130321 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 322 cggcgaggaggagcacggcggcggcg 347 |||||| ||||||||||||||||||| Sbjct: 82534 cggcgacgaggagcacggcggcggcg 82509 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 322 cggcgaggaggagcacggcggcggcg 347 |||||| ||||||||||||||||||| Sbjct: 60083 cggcgacgaggagcacggcggcggcg 60108
>dbj|AP005933.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0674B07 Length = 192191 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 322 cggcgaggaggagcacggcggcggcg 347 |||||| ||||||||||||||||||| Sbjct: 57784 cggcgacgaggagcacggcggcggcg 57759 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 322 cggcgaggaggagcacggcggcggcg 347 |||||| ||||||||||||||||||| Sbjct: 9972 cggcgacgaggagcacggcggcggcg 9947
>dbj|AK109941.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-E04, full insert sequence Length = 1363 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 317 gaggacggcgaggaggagcacggcggcggc 346 |||||||||||||||||| |||||||||| Sbjct: 435 gaggacggcgaggaggagagcggcggcggc 406
>dbj|AK060066.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-H05, full insert sequence Length = 971 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 326 gaggaggagcacggcggcggcg 347 |||||||||||||||||||||| Sbjct: 163 gaggaggagcacggcggcggcg 142
>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0519E12 Length = 152448 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 326 gaggaggagcacggcggcggcg 347 |||||||||||||||||||||| Sbjct: 80972 gaggaggagcacggcggcggcg 80951
>ref|XM_630812.1| Dictyostelium discoideum hypothetical protein (DDB0191392), partial mRNA Length = 1278 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 caagaacaacaaattaatgaa 48 ||||||||||||||||||||| Sbjct: 208 caagaacaacaaattaatgaa 228
>ref|XM_481626.1| Oryza sativa (japonica cultivar-group), mRNA Length = 804 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 297 gcggcggcgagggccggcatg 317 ||||||||||||||||||||| Sbjct: 562 gcggcggcgagggccggcatg 582
>ref|NM_194476.1| Oryza sativa (japonica cultivar-group) putative receptor-like protein kinase (OSJNBa0046L02.6), mRNA Length = 2442 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 289 gggcctgcgcggcggcgagggccgg 313 ||||||| ||||||||||||||||| Sbjct: 58 gggcctgggcggcggcgagggccgg 34
>ref|XM_450428.1| Oryza sativa (japonica cultivar-group), mRNA Length = 462 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 cggtgcgggggcctgcgcggcggcg 305 ||||||||||||| ||||||||||| Sbjct: 260 cggtgcgggggcccgcgcggcggcg 284
>ref|XM_479349.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2508 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 cggcgaggaggagcacggcgg 342 ||||||||||||||||||||| Sbjct: 24 cggcgaggaggagcacggcgg 44
>ref|XM_473475.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2382 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 320 gacggcgaggaggagcacggcggcg 344 ||||||||||||||| ||||||||| Sbjct: 75 gacggcgaggaggaggacggcggcg 51
>gb|AY360394.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0070J19, complete sequence Length = 158749 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 cggtgcgggggcctgcgcggcggcg 305 ||||||||||||| ||||||||||| Sbjct: 99526 cggtgcgggggcccgcgcggcggcg 99550
>gb|AC079632.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0046L02, complete sequence Length = 142381 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 289 gggcctgcgcggcggcgagggccgg 313 ||||||| ||||||||||||||||| Sbjct: 59951 gggcctgggcggcggcgagggccgg 59927
>gb|AY392428.1| Dictyostelium discoideum DNA repair protein RAD50 gene, complete cds Length = 1538 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 caagaacaacaaattaatgaa 48 ||||||||||||||||||||| Sbjct: 458 caagaacaacaaattaatgaa 478
>gb|AC119851.9| Mus musculus chromosome 7, clone RP23-106N20, complete sequence Length = 226307 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 20 ctagagtacaagaacaacaaattaa 44 ||||||||||| ||||||||||||| Sbjct: 204149 ctagagtacaaaaacaacaaattaa 204173
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 289 gggcctgcgcggcggcgagggccgg 313 ||||||| ||||||||||||||||| Sbjct: 74057 gggcctgggcggcggcgagggccgg 74033
>emb|X74654.1|ZMB3TUB Z.mays mRNA for beta 3 tubulin Length = 1686 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 318 aggacggcgaggaggagcacg 338 ||||||||||||||||||||| Sbjct: 1422 aggacggcgaggaggagcacg 1442
>emb|AL606682.3|OSJN00085 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065O17, complete sequence Length = 167269 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 320 gacggcgaggaggagcacggcggcg 344 ||||||||||||||| ||||||||| Sbjct: 133421 gacggcgaggaggaggacggcggcg 133397
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 285 gcgggggcctgcgcggcggcg 305 ||||||||||||||||||||| Sbjct: 1342541 gcgggggcctgcgcggcggcg 1342561
>gb|AC166065.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1136E01, complete sequence Length = 105139 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 289 gggcctgcgcggcggcgagggccgg 313 ||||||| ||||||||||||||||| Sbjct: 79196 gggcctgggcggcggcgagggccgg 79172
>gb|AC151608.2| Emiliania huxleyi clone JGIACCU-13E1, complete sequence Length = 30907 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 317 gaggacggcgaggaggagcacggcggcgg 345 ||||| |||| |||||||||||||||||| Sbjct: 13827 gaggagggcgcggaggagcacggcggcgg 13799
>tpg|BK000760.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M143, partial sequence Length = 1066 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 277 gcgccggtgcgggggcctgcgcggcggcg 305 ||||||| ||||||| ||||||||||||| Sbjct: 544 gcgccggcgcggggggctgcgcggcggcg 516
>gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 genomic sequence, complete sequence Length = 178022 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 277 gcgccggtgcgggggcctgcgcggcggcg 305 ||||||| ||||||| ||||||||||||| Sbjct: 153637 gcgccggcgcggggggctgcgcggcggcg 153609
>gb|AC108883.1| Genomic sequence for (japonica cultivar-group) cultivar Nipponbare clone OJ1136E01, from chromosome 10, complete sequence Length = 113856 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 289 gggcctgcgcggcggcgagggccgg 313 ||||||| ||||||||||||||||| Sbjct: 39800 gggcctgggcggcggcgagggccgg 39824
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 320 gacggcgaggaggagcacggcggcg 344 ||||||||||||||| ||||||||| Sbjct: 27970568 gacggcgaggaggaggacggcggcg 27970544 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 gggaggaggcgtccaacggg 194 |||||||||||||||||||| Sbjct: 17165419 gggaggaggcgtccaacggg 17165400
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 323 ggcgaggaggagcacggcggcggcg 347 |||||||||||||| |||||||||| Sbjct: 26620962 ggcgaggaggagcagggcggcggcg 26620986 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 324 gcgaggaggagcacggcggcggcg 347 ||||||||||| |||||||||||| Sbjct: 26142204 gcgaggaggaggacggcggcggcg 26142227
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 277 gcgccggtgcgggggcctgcgcggcggcg 305 ||||||| ||||||| ||||||||||||| Sbjct: 20891238 gcgccggcgcggggggctgcgcggcggcg 20891210 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 289 gggcctgcgcggcggcgagggccgg 313 ||||||| ||||||||||||||||| Sbjct: 74057 gggcctgggcggcggcgagggccgg 74033
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 cggtgcgggggcctgcgcggcggcg 305 ||||||||||||| ||||||||||| Sbjct: 5487199 cggtgcgggggcccgcgcggcggcg 5487223 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 317 gaggacggcgaggaggagcacggcggcggcga 348 |||||||||||||||||| ||| || |||||| Sbjct: 18194370 gaggacggcgaggaggaggacgacgccggcga 18194339
>dbj|AB187183.1| Lentinula edodes DNA, M13 RAPD sequence Length = 253 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 110 aagagaaagatgaacaaaaga 130 ||||||||||||||||||||| Sbjct: 99 aagagaaagatgaacaaaaga 79
>dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0006C08 Length = 151987 Score = 42.1 bits (21), Expect = 1.4 Identities = 54/65 (83%) Strand = Plus / Plus Query: 195 tggatgaggtaggtgagcaccagcgccacgatcatcagaaggtaggcgacgccctggtcg 254 ||||| |||||||||||||| || ||||| | |||||| | ||| |||| ||| ||||| Sbjct: 29801 tggattaggtaggtgagcacaagagccaccagcatcaggatgtatgcgatccccaggtcg 29860 Query: 255 atcga 259 ||||| Sbjct: 29861 atcga 29865
>dbj|AP006166.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1435D02 Length = 131152 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 cggtgcgggggcctgcgcggcggcg 305 ||||||||||||| ||||||||||| Sbjct: 65919 cggtgcgggggcccgcgcggcggcg 65943
>dbj|AP005748.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0042E12 Length = 164688 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 cggtgcgggggcctgcgcggcggcg 305 ||||||||||||| ||||||||||| Sbjct: 125442 cggtgcgggggcccgcgcggcggcg 125466
>dbj|AP005547.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1031_C12 Length = 157574 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 cggtgcgggggcctgcgcggcggcg 305 ||||||||||||| ||||||||||| Sbjct: 93038 cggtgcgggggcccgcgcggcggcg 93062
>dbj|AP005819.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0063H21 Length = 188058 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 cggtgcgggggcctgcgcggcggcg 305 ||||||||||||| ||||||||||| Sbjct: 167797 cggtgcgggggcccgcgcggcggcg 167773
>dbj|AP004458.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0045D08 Length = 160541 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 cggtgcgggggcctgcgcggcggcg 305 ||||||||||||| ||||||||||| Sbjct: 52954 cggtgcgggggcccgcgcggcggcg 52930
>dbj|AP004637.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0703C03 Length = 162620 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 297 gcggcggcgagggccggcatg 317 ||||||||||||||||||||| Sbjct: 128824 gcggcggcgagggccggcatg 128844
>dbj|AK121858.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033102I19, full insert sequence Length = 2811 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 289 gggcctgcgcggcggcgagggccgg 313 ||||||| ||||||||||||||||| Sbjct: 90 gggcctgggcggcggcgagggccgg 66
>dbj|AP003884.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1136_A10 Length = 101249 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 297 gcggcggcgagggccggcatg 317 ||||||||||||||||||||| Sbjct: 16348 gcggcggcgagggccggcatg 16368
>dbj|AP004272.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0427D10 Length = 154192 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 cggcgaggaggagcacggcgg 342 ||||||||||||||||||||| Sbjct: 99950 cggcgaggaggagcacggcgg 99970
>dbj|AK106729.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-H08, full insert sequence Length = 804 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 297 gcggcggcgagggccggcatg 317 ||||||||||||||||||||| Sbjct: 562 gcggcggcgagggccggcatg 582
>dbj|AK100861.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123N15, full insert sequence Length = 2764 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 320 gacggcgaggaggagcacggcggcg 344 ||||||||||||||| ||||||||| Sbjct: 94 gacggcgaggaggaggacggcggcg 70
>dbj|AK068970.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001K01, full insert sequence Length = 2639 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 289 gggcctgcgcggcggcgagggccgg 313 ||||||| ||||||||||||||||| Sbjct: 2414 gggcctgggcggcggcgagggccgg 2438
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 277 gcgccggtgcgggggcctgcgcggcggcg 305 ||||||| ||||||| ||||||||||||| Sbjct: 20902502 gcgccggcgcggggggctgcgcggcggcg 20902474 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 289 gggcctgcgcggcggcgagggccgg 313 ||||||| ||||||||||||||||| Sbjct: 74055 gggcctgggcggcggcgagggccgg 74031
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 323 ggcgaggaggagcacggcggcggcg 347 |||||||||||||| |||||||||| Sbjct: 26549131 ggcgaggaggagcagggcggcggcg 26549155 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 324 gcgaggaggagcacggcggcggcg 347 ||||||||||| |||||||||||| Sbjct: 26070380 gcgaggaggaggacggcggcggcg 26070403
>emb|AL731891.2|CNS08C8V Oryza sativa chromosome 12, . BAC OJ1374_A04 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 101173 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 323 ggcgaggaggagcacggcggcggcg 347 |||||||||||||| |||||||||| Sbjct: 39832 ggcgaggaggagcagggcggcggcg 39856
>emb|CT005238.2| Methylocapsa acidiphila B2, overlapping BAC clones, complete sequence Length = 100887 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 gtcgatcgaagacgcgtcgct 271 ||||||||||||||||||||| Sbjct: 27926 gtcgatcgaagacgcgtcgct 27906
>ref|XM_642060.1| Dictyostelium discoideum hypothetical protein (DDB0202086), partial mRNA Length = 3792 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 acaagaacaacaaattaatgaatc 50 |||| ||||||||||||||||||| Sbjct: 948 acaacaacaacaaattaatgaatc 971
>gb|AY702979.1| Capsicum annuum clone YAC YCA22D8 genomic sequence Length = 103975 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 acaagaacaacaaattaatg 46 |||||||||||||||||||| Sbjct: 72080 acaagaacaacaaattaatg 72061
>ref|XM_483510.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1197 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 cggcgaggaggagcacggcg 341 |||||||||||||||||||| Sbjct: 61 cggcgaggaggagcacggcg 42
>ref|XM_483092.1| Oryza sativa (japonica cultivar-group), mRNA Length = 816 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 317 gaggacggcgaggaggagcacggcggcg 344 ||||||| ||||||||||| |||||||| Sbjct: 45 gaggacgacgaggaggagcgcggcggcg 18
>ref|XM_468087.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1719 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 324 gcgaggaggagcacggcggcggcg 347 |||||||||||| ||||||||||| Sbjct: 127 gcgaggaggagcgcggcggcggcg 104
>ref|XM_507537.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1293_A01.6 mRNA Length = 2276 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 324 gcgaggaggagcacggcggcggcg 347 |||||||||||| ||||||||||| Sbjct: 138 gcgaggaggagcgcggcggcggcg 115
>ref|XM_507008.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1293_A01.6 mRNA Length = 1737 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 324 gcgaggaggagcacggcggcggcg 347 |||||||||||| ||||||||||| Sbjct: 144 gcgaggaggagcgcggcggcggcg 121
>ref|XM_464469.1| Oryza sativa (japonica cultivar-group), mRNA Length = 504 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 320 gacggcgaggaggagcacggcggc 343 |||||||||||||||| ||||||| Sbjct: 53 gacggcgaggaggagctcggcggc 30
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 cgcgtcgctggtgggcgccg 282 |||||||||||||||||||| Sbjct: 2066799 cgcgtcgctggtgggcgccg 2066780
>ref|NM_190774.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1467 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cggcatgaggacggcgagga 330 |||||||||||||||||||| Sbjct: 60 cggcatgaggacggcgagga 41
>ref|NM_191385.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2073 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 gacggcgaggaggagcacgg 339 |||||||||||||||||||| Sbjct: 393 gacggcgaggaggagcacgg 374
>ref|NM_192829.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1734 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 gcatgaggacggcgaggaggagca 336 |||||| ||||||||||||||||| Sbjct: 185 gcatgaagacggcgaggaggagca 162
>ref|NM_186862.2| Oryza sativa (japonica cultivar-group), mRNA Length = 893 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 317 gaggacggcgaggaggagcacggcggcg 344 ||||||||||||||||| ||||||||| Sbjct: 196 gaggacggcgaggaggacgacggcggcg 169
>ref|XM_472067.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2127 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 gggaggaggcgtccaacggg 194 |||||||||||||||||||| Sbjct: 1484 gggaggaggcgtccaacggg 1503
>gb|AE013080.1| Thermoanaerobacter tengcongensis MB4, section 107 of 244 of the complete genome Length = 11801 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 gagtacaagaacaacaaatt 42 |||||||||||||||||||| Sbjct: 6405 gagtacaagaacaacaaatt 6424
>gb|AC135864.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0071K13, complete sequence Length = 176150 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 317 gaggacggcgaggaggagcacggcggcggcga 348 ||||||||||||||||||| ||| || ||||| Sbjct: 65640 gaggacggcgaggaggagcgcggtggtggcga 65671
>ref|XM_720818.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY05451) partial mRNA Length = 1059 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 aagaacaacaaattaatgaa 48 |||||||||||||||||||| Sbjct: 164 aagaacaacaaattaatgaa 183
>gb|AC144636.4| Artibeus jamaicensis clone 1A13, complete sequence Length = 114691 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 106 gaacaagagaaagatgaacaaaag 129 |||| ||||||||||||||||||| Sbjct: 25172 gaactagagaaagatgaacaaaag 25195
>ref|XM_663202.1| Cryptosporidium hominis TU502 vacuolar protein sorting-associated protein (Chro.30060) partial mRNA Length = 13242 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 agagaaagatgaacaaaaga 130 |||||||||||||||||||| Sbjct: 3081 agagaaagatgaacaaaaga 3100
>gb|AC142314.1| Pan troglodytes BAC clone RP43-48H9 from 7, complete sequence Length = 198313 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 agaaagatgaacaaaagaat 132 |||||||||||||||||||| Sbjct: 100269 agaaagatgaacaaaagaat 100288
>ref|XM_779811.1| PREDICTED: Strongylocentrotus purpuratus similar to Codanin-1 (LOC579713), mRNA Length = 2340 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 tggatgaacagatgccctct 411 |||||||||||||||||||| Sbjct: 1633 tggatgaacagatgccctct 1614
>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16 Length = 343473 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 gcgggggcctgcgcggcggc 304 |||||||||||||||||||| Sbjct: 61072 gcgggggcctgcgcggcggc 61053
>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16 Length = 349497 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 gcctgcgcggcggcgagggccggc 314 |||||||||||||| ||||||||| Sbjct: 70802 gcctgcgcggcggccagggccggc 70825
>emb|BX640435.1| Bordetella parapertussis strain 12822, complete genome; segment 13/14 Length = 346259 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 gcgggggcctgcgcggcggc 304 |||||||||||||||||||| Sbjct: 325994 gcgggggcctgcgcggcggc 325975
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 gcctgcgcggcggcgagggc 310 |||||||||||||||||||| Sbjct: 1477533 gcctgcgcggcggcgagggc 1477514
>gb|DP000035.1| Oryctolagus cuniculus target 116 genomic scaffold Length = 434755 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 317 gaggacggcgaggaggagcacggc 340 |||||||||||||||||| ||||| Sbjct: 249191 gaggacggcgaggaggaggacggc 249168
>gb|DP000001.1| Artibeus jamaicensis target 1 genomic scaffold Length = 584809 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 106 gaacaagagaaagatgaacaaaag 129 |||| ||||||||||||||||||| Sbjct: 349731 gaactagagaaagatgaacaaaag 349754
>gb|AC093199.1| Drosophila melanogaster, chromosome 2L, region 33A-33A, BAC clone BACR05B13, complete sequence Length = 168641 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 atccctagagtacaagaacaacaa 39 |||| ||||||||||||||||||| Sbjct: 76619 atccatagagtacaagaacaacaa 76642
>tpg|BK000086.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) cellulose synthase-like C1 gene, complete cds Length = 7383 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 gacggcgaggaggagcacgg 339 |||||||||||||||||||| Sbjct: 1438 gacggcgaggaggagcacgg 1419
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 317 gaggacggcgaggaggagcacggcggcggcga 348 ||||||||||||||||||| ||| || ||||| Sbjct: 14955853 gaggacggcgaggaggagcgcggtggtggcga 14955884
>dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1040D09 Length = 148102 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 gcatgaggacggcgaggaggagca 336 |||||| ||||||||||||||||| Sbjct: 89644 gcatgaagacggcgaggaggagca 89667
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 gcctgcgcggcggcgagggccggc 314 |||| ||||||||||||||||||| Sbjct: 4721544 gcctccgcggcggcgagggccggc 4721567
>gb|AC114771.3| Homo sapiens BAC clone RP11-425I13 from 4, complete sequence Length = 121946 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 ggcggcgagggccggcatga 318 |||||||||||||||||||| Sbjct: 100475 ggcggcgagggccggcatga 100456
>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0677H08 Length = 178830 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cggcatgaggacggcgagga 330 |||||||||||||||||||| Sbjct: 95364 cggcatgaggacggcgagga 95345
>dbj|AP005183.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0021G06 Length = 137678 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 317 gaggacggcgaggaggagcacggcggcg 344 ||||||||||||||||| ||||||||| Sbjct: 120115 gaggacggcgaggaggacgacggcggcg 120142
>dbj|AP005528.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0702C09 Length = 138203 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 cggcgaggaggagcacggcg 341 |||||||||||||||||||| Sbjct: 44818 cggcgaggaggagcacggcg 44799
>dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1293_A01 Length = 139121 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 324 gcgaggaggagcacggcggcggcg 347 |||||||||||| ||||||||||| Sbjct: 26541 gcgaggaggagcgcggcggcggcg 26518
>dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1524_D08 Length = 143046 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 320 gacggcgaggaggagcacggcggc 343 |||||||||||||||| ||||||| Sbjct: 48881 gacggcgaggaggagctcggcggc 48858
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gcctgcgcggcggcgagggc 310 |||||||||||||||||||| Sbjct: 2459868 gcctgcgcggcggcgagggc 2459887
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 ggggcctgcgcggcggcgag 307 |||||||||||||||||||| Sbjct: 1262671 ggggcctgcgcggcggcgag 1262652
>dbj|AP002843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0407B12 Length = 148762 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 gcatgaggacggcgaggaggagca 336 |||||| ||||||||||||||||| Sbjct: 32258 gcatgaagacggcgaggaggagca 32281
>dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0041E11 Length = 146335 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 321 acggcgaggaggagcacggcggcggcga 348 ||||||||| ||||| |||||||||||| Sbjct: 34590 acggcgaggtggagctcggcggcggcga 34617
>dbj|AP003377.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0053G03 Length = 101901 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 gacggcgaggaggagcacgg 339 |||||||||||||||||||| Sbjct: 47824 gacggcgaggaggagcacgg 47843
>dbj|AP005759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0556A05 Length = 158189 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 317 gaggacggcgaggaggagcacggcggcggcga 348 |||||||||||||||||| ||| || |||||| Sbjct: 43094 gaggacggcgaggaggaggacgacgccggcga 43063
>dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0605H02 Length = 175547 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 317 gaggacggcgaggaggagcacggcggcg 344 ||||||| ||||||||||| |||||||| Sbjct: 111918 gaggacgacgaggaggagcgcggcggcg 111891
>dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0444A09 Length = 125900 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 gggaggaggcgtccaacggg 194 |||||||||||||||||||| Sbjct: 65270 gggaggaggcgtccaacggg 65289
>emb|BX072530.5| Zebrafish DNA sequence from clone DKEY-221K19, complete sequence Length = 167009 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 tacaagaacaacaaattaat 45 |||||||||||||||||||| Sbjct: 124021 tacaagaacaacaaattaat 124002
>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1225_F07 Length = 142772 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 320 gacggcgaggaggagcacggcggc 343 |||||||||||||||| ||||||| Sbjct: 121603 gacggcgaggaggagctcggcggc 121580
>dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0702E04 Length = 190948 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 cggcgaggaggagcacggcg 341 |||||||||||||||||||| Sbjct: 182158 cggcgaggaggagcacggcg 182139
>dbj|AP005178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0056I06 Length = 138653 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 317 gaggacggcgaggaggagcacggcggcg 344 ||||||||||||||||| ||||||||| Sbjct: 46610 gaggacggcgaggaggacgacggcggcg 46637
>dbj|AK107935.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-A06, full insert sequence Length = 893 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 317 gaggacggcgaggaggagcacggcggcg 344 ||||||||||||||||| ||||||||| Sbjct: 196 gaggacggcgaggaggacgacggcggcg 169
>dbj|AK106971.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-G05, full insert sequence Length = 2276 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 324 gcgaggaggagcacggcggcggcg 347 |||||||||||| ||||||||||| Sbjct: 138 gcgaggaggagcgcggcggcggcg 115
>dbj|AK106273.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-G11, full insert sequence Length = 1336 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 321 acggcgaggaggagcacggcggcggcga 348 ||||||||| ||||| |||||||||||| Sbjct: 893 acggcgaggtggagctcggcggcggcga 866
>dbj|AK106334.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-F11, full insert sequence Length = 1256 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 321 acggcgaggaggagcacggcggcggcga 348 ||||||||| ||||| |||||||||||| Sbjct: 817 acggcgaggtggagctcggcggcggcga 790
>dbj|AK100190.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035K01, full insert sequence Length = 1719 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 324 gcgaggaggagcacggcggcggcg 347 |||||||||||| ||||||||||| Sbjct: 127 gcgaggaggagcgcggcggcggcg 104
>dbj|AK100098.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004D19, full insert sequence Length = 1737 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 324 gcgaggaggagcacggcggcggcg 347 |||||||||||| ||||||||||| Sbjct: 144 gcgaggaggagcgcggcggcggcg 121
>dbj|AK070330.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049H21, full insert sequence Length = 1264 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 321 acggcgaggaggagcacggcggcggcga 348 ||||||||| ||||| |||||||||||| Sbjct: 897 acggcgaggtggagctcggcggcggcga 870
>emb|CT573073.1| Kuenenia stuttgartiensis genome fragment KUST_C (3 of 5) Length = 893329 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 aacgggtggatgaggtaggt 208 |||||||||||||||||||| Sbjct: 824200 aacgggtggatgaggtaggt 824219
>gb|AE003633.3| Drosophila melanogaster chromosome 2L, section 42 of 83 of the complete sequence Length = 266175 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 atccctagagtacaagaacaacaa 39 |||| ||||||||||||||||||| Sbjct: 243925 atccatagagtacaagaacaacaa 243902
>gb|AC006240.1|AC006240 Drosophila melanogaster, chromosome 2L, region 33A3-33B2, P1 clones DS06189, DS04362, and DS07071, complete sequence Length = 170056 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 atccctagagtacaagaacaacaa 39 |||| ||||||||||||||||||| Sbjct: 161968 atccatagagtacaagaacaacaa 161991
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 285 gcgggggcctgcgcggcggcgagg 308 |||| ||||||||||||||||||| Sbjct: 1944583 gcggtggcctgcgcggcggcgagg 1944560
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 317 gaggacggcgaggaggagcacggcggcg 344 |||| |||||||||||||| |||||||| Sbjct: 2882907 gagggcggcgaggaggagcgcggcggcg 2882880
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 317 gaggacggcgaggaggagcacggcggcggcga 348 ||||||||||||||||||| ||| || ||||| Sbjct: 15037548 gaggacggcgaggaggagcgcggtggtggcga 15037579
>emb|AL662956.3|OSJN00159 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018J19, complete sequence Length = 169559 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 gggaggaggcgtccaacggg 194 |||||||||||||||||||| Sbjct: 109716 gggaggaggcgtccaacggg 109697
>emb|BX000457.2|CNS08CDE Oryza sativa chromosome 12, . BAC OJ1388_B05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144241 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 324 gcgaggaggagcacggcggcggcg 347 ||||||||||| |||||||||||| Sbjct: 32442 gcgaggaggaggacggcggcggcg 32465
>emb|AL954359.5| Zebrafish DNA sequence from clone CH211-270N8, complete sequence Length = 167392 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 tacaagaacaacaaattaat 45 |||||||||||||||||||| Sbjct: 82449 tacaagaacaacaaattaat 82430
>dbj|AB193609.1| Streptomyces sp. NRRL 11266 tetronomycin biosynthetic gene cluster, partial and complete cds Length = 113234 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 gcgcggcggcgagggccggc 314 |||||||||||||||||||| Sbjct: 99950 gcgcggcggcgagggccggc 99969
>dbj|AP004960.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT19B18, TM0139, complete sequence Length = 106089 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 gaggacggcgaggaggagca 336 |||||||||||||||||||| Sbjct: 97860 gaggacggcgaggaggagca 97841
>emb|AL772189.7| Zebrafish DNA sequence from clone CH211-135B6 in linkage group 17, complete sequence Length = 183958 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 tagagtacaagaacaacaaattaa 44 ||||||| |||||||||||||||| Sbjct: 144980 tagagtagaagaacaacaaattaa 144957
>dbj|AP003534.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1554H10 Length = 194091 Score = 40.1 bits (20), Expect = 5.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 27 acaagaacaacaaattaatgaatccaaa 54 |||||||||| ||||||||||||||||| Sbjct: 97191 acaagaacaa-aaattaatgaatccaaa 97217
>dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0433F09 Length = 150150 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 321 acggcgaggaggagcacggcggcggcga 348 ||||||||| ||||| |||||||||||| Sbjct: 58842 acggcgaggtggagctcggcggcggcga 58869 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,996,545 Number of Sequences: 3902068 Number of extensions: 3996545 Number of successful extensions: 98606 Number of sequences better than 10.0: 152 Number of HSP's better than 10.0 without gapping: 167 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 94437 Number of HSP's gapped (non-prelim): 4170 length of query: 420 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 398 effective length of database: 17,147,199,772 effective search space: 6824585509256 effective search space used: 6824585509256 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
