>ORC1_DROME (O16810) Origin recognition complex subunit 1 (DmORC1)|
          Length = 924

 Score = 31.6 bits (70), Expect = 2.7
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
 Frame = -3

Query: 735 PNNGTPSKSKGKTAMKDAKG------TPKTPSEIKKEVKEKATTGSANKMKDDLAKDSSN 574
           P     S +  KTA   +KG      TP TPS+  K+++    + S  +  D  AKDSS 
Sbjct: 490 PTRTRRSSTTTKTATTPSKGITTATATPMTPSQKMKKIRAGELSPSMQQRTDLPAKDSSK 549

Query: 573 QKLK 562
            +L+
Sbjct: 550 SELQ 553

>DDX46_RAT (Q62780) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)|
           (DEAD box protein 46) (Helicase of 117.4 kDa)
          Length = 1032

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 16/60 (26%), Positives = 30/60 (50%)
 Frame = -3

Query: 738 RPNNGTPSKSKGKTAMKDAKGTPKTPSEIKKEVKEKATTGSANKMKDDLAKDSSNQKLKE 559
           R    + S+S+G+ +   + G+    +E +   KEKA  G ++K K     D  ++K K+
Sbjct: 88  RDRRRSRSRSRGRRSRSSSPGSKSKKAENRSRSKEKAEGGDSSKEKKKDKDDKEDEKEKD 147

>TEGU_EHV1B (P28955) Large tegument protein|
          Length = 3421

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
 Frame = -3

Query: 720  PSKSKGKTAMKDAKGTPKTPSEIKKEVKEKATTGSANKMKD-------DLAKDSSNQKL 565
            P+KS    A   AK   K+ +E+ K  K++A   + ++ KD       D AK ++ QKL
Sbjct: 2845 PAKSAAAPAAAPAKDQTKSAAEVPKPAKDQAKDQAKDQAKDQAKDQAKDQAKSTTGQKL 2903

>EBNA3_EBV (P12977) Epstein-Barr nuclear antigen 3 (EBV nuclear antigen 3)|
           (EBNA-3) (EBNA-3A)
          Length = 812

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +3

Query: 456 QIHYPPLERFLASGQAYPSQIHRQICFHPCPCSQPP 563
           Q+  PP     A G AYP  +H Q    PCP +Q P
Sbjct: 310 QVPEPPTIHLAAQGMAYP--LHEQHGMAPCPVAQAP 343

>DDX46_MOUSE (Q569Z5) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)|
           (DEAD box protein 46)
          Length = 1032

 Score = 30.8 bits (68), Expect = 4.6
 Identities = 16/60 (26%), Positives = 30/60 (50%)
 Frame = -3

Query: 738 RPNNGTPSKSKGKTAMKDAKGTPKTPSEIKKEVKEKATTGSANKMKDDLAKDSSNQKLKE 559
           R    + S+S+G+ +   + G+    +E +   KEKA  G ++K K     D  ++K K+
Sbjct: 88  RDRRRSRSRSRGRRSRSSSPGSKTKKTENRSRSKEKAEGGDSSKEKKKDKDDKEDEKEKD 147

>Y428_METJA (Q57871) Hypothetical protein MJ0428 (EC 1.1.1.-)|
          Length = 427

 Score = 30.4 bits (67), Expect = 6.0
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = +2

Query: 650 LISLGVLGVPLASFIAVFPFDLLGVPL 730
           +I LG +G+P AS +A+  FD++GV +
Sbjct: 15  VIGLGYIGLPTASMLAIQGFDVIGVDI 41

>VTS1_USTMA (Q4P965) Protein VTS1|
          Length = 728

 Score = 30.0 bits (66), Expect = 7.9
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = -3

Query: 738 RPNNGTPSKSKGKTAMKDAKGTPKTPSEIKKEVKEKATTGSANKMKD 598
           RP +G P  +  K A  D  G      E+ +E+   AT  SA   KD
Sbjct: 682 RPGSGVPDGNNDKAADVDDAGDSNEAQEVDRELGGAATAASAPVAKD 728


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,708,466
Number of Sequences: 219361
Number of extensions: 1205789
Number of successful extensions: 4245
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4236
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7762912789
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)