ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd27m16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_473074.1| Oryza sativa (japonica cultivar-group), predic... 212 1e-51
2dbj|AK099122.1| Oryza sativa (japonica cultivar-group) cDNA clon... 212 1e-51
3dbj|AK059708.1| Oryza sativa (japonica cultivar-group) cDNA clon... 212 1e-51
4dbj|AK059306.1| Oryza sativa (japonica cultivar-group) cDNA clon... 212 1e-51
5gb|AY103950.1| Zea mays PCO137410 mRNA sequence 151 4e-33
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 121 4e-24
7emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 121 4e-24
8gb|AY110824.1| Zea mays CL23962_1 mRNA sequence 113 9e-22
9gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence 52 0.003
10gb|AC053527.8| Homo sapiens BAC clone RP11-692D12 from 4, comple... 50 0.011
11ref|XM_466698.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.042
12dbj|AK066756.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.042
13emb|AJ337129.1|HSA337129 Homo sapiens genomic sequence surroundi... 44 0.66
14gb|BC081137.1| Xenopus laevis MGC83957 protein, mRNA (cDNA clone... 42 2.6
15ref|XM_824192.1| Trypanosoma brucei TREU927 heat shock protein H... 42 2.6
16emb|AL691497.8| Human DNA sequence from clone RP11-542C10 on chr... 42 2.6
17emb|AL607152.21| Mouse DNA sequence from clone RP23-198N14 on ch... 42 2.6
18gb|AC116499.9| Mus musculus chromosome 8, clone RP24-294M17, com... 42 2.6
19emb|BX936364.6| Zebrafish DNA sequence from clone CH211-247G11 i... 42 2.6
20emb|AL954652.3| Zebrafish DNA sequence from clone CH211-239O15 i... 42 2.6
21gb|AC138677.8| Mus musculus chromosome 8, clone RP23-366O14, com... 42 2.6
22gb|AC135015.3| Mus musculus BAC clone RP24-227L14 from 8, comple... 42 2.6
23gb|AC126930.4| Mus musculus BAC clone RP24-547J4 from 8, complet... 42 2.6
24tpe|BN000068.1|TBR000068 TPA: TPA_inf: Trypanosoma brucei hslU g... 42 2.6
25emb|AL663088.10| Mouse DNA sequence from clone RP23-293H17 on ch... 42 2.6 
>ref|XM_473074.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1419

 Score =  212 bits (107), Expect = 1e-51
 Identities = 224/263 (85%)
 Strand = Plus / Minus

                                                                        
Query: 438  gtcgctggctgatgaatatcggcttctcgtctttgaagtgctctcagaaactcccctgag 497
            |||||||||||| ||| ||| | |||||||||||| | |||||||| ||| ||| | |||
Sbjct: 1340 gtcgctggctgacgaacatcagtttctcgtctttgtaatgctctcacaaattcctccgag 1281

                                                                        
Query: 498  ctcaggtgcccatcattgttcgtgtcaaacacatggaaaatgatgtccaccactctgtca 557
            |||| || ||||||||  || || ||||||||||||||||||||||| || |||||||||
Sbjct: 1280 ctcaagttcccatcatgatttgtatcaaacacatggaaaatgatgtcaactactctgtca 1221

                                                                        
Query: 558  gttaattcaacaccacagacatgctgtgctgcacgcttcagatcctgctttgtcaattgc 617
            ||||| ||||||||||| ||||| || ||||||||||| |||||||||||||||||  ||
Sbjct: 1220 gttaagtcaacaccacaaacatggtgcgctgcacgcttgagatcctgctttgtcaacagc 1161

                                                                        
Query: 618  ccatttacttgaccataagcaaatatagccatcgtcaatgattccaatcttcgacgtaaa 677
            ||||||||||  ||||||| ||| |||||||||| || ||  ||||||||||| || |||
Sbjct: 1160 ccatttactttcccataagtaaagatagccatcgccagtggctccaatcttcgtcgcaaa 1101

                                   
Query: 678  tccgcaaatgccttaaactcctc 700
            || ||||| |  |||||||||||
Sbjct: 1100 tcagcaaaggatttaaactcctc 1078
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>dbj|AK099122.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039L05, full
            insert sequence
          Length = 1796

 Score =  212 bits (107), Expect = 1e-51
 Identities = 224/263 (85%)
 Strand = Plus / Minus

                                                                        
Query: 438  gtcgctggctgatgaatatcggcttctcgtctttgaagtgctctcagaaactcccctgag 497
            |||||||||||| ||| ||| | |||||||||||| | |||||||| ||| ||| | |||
Sbjct: 1479 gtcgctggctgacgaacatcagtttctcgtctttgtaatgctctcacaaattcctccgag 1420

                                                                        
Query: 498  ctcaggtgcccatcattgttcgtgtcaaacacatggaaaatgatgtccaccactctgtca 557
            |||| || ||||||||  || || ||||||||||||||||||||||| || |||||||||
Sbjct: 1419 ctcaagttcccatcatgatttgtatcaaacacatggaaaatgatgtcaactactctgtca 1360

                                                                        
Query: 558  gttaattcaacaccacagacatgctgtgctgcacgcttcagatcctgctttgtcaattgc 617
            ||||| ||||||||||| ||||| || ||||||||||| |||||||||||||||||  ||
Sbjct: 1359 gttaagtcaacaccacaaacatggtgcgctgcacgcttgagatcctgctttgtcaacagc 1300

                                                                        
Query: 618  ccatttacttgaccataagcaaatatagccatcgtcaatgattccaatcttcgacgtaaa 677
            ||||||||||  ||||||| ||| |||||||||| || ||  ||||||||||| || |||
Sbjct: 1299 ccatttactttcccataagtaaagatagccatcgccagtggctccaatcttcgtcgcaaa 1240

                                   
Query: 678  tccgcaaatgccttaaactcctc 700
            || ||||| |  |||||||||||
Sbjct: 1239 tcagcaaaggatttaaactcctc 1217



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 187  acacgatatttacagcaaaat 207
            |||||||||||||||||||||
Sbjct: 1640 acacgatatttacagcaaaat 1620
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>dbj|AK059708.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-E06, full
            insert sequence
          Length = 2039

 Score =  212 bits (107), Expect = 1e-51
 Identities = 224/263 (85%)
 Strand = Plus / Minus

                                                                        
Query: 438  gtcgctggctgatgaatatcggcttctcgtctttgaagtgctctcagaaactcccctgag 497
            |||||||||||| ||| ||| | |||||||||||| | |||||||| ||| ||| | |||
Sbjct: 1721 gtcgctggctgacgaacatcagtttctcgtctttgtaatgctctcacaaattcctccgag 1662

                                                                        
Query: 498  ctcaggtgcccatcattgttcgtgtcaaacacatggaaaatgatgtccaccactctgtca 557
            |||| || ||||||||  || || ||||||||||||||||||||||| || |||||||||
Sbjct: 1661 ctcaagttcccatcatgatttgtatcaaacacatggaaaatgatgtcaactactctgtca 1602

                                                                        
Query: 558  gttaattcaacaccacagacatgctgtgctgcacgcttcagatcctgctttgtcaattgc 617
            ||||| ||||||||||| ||||| || ||||||||||| |||||||||||||||||  ||
Sbjct: 1601 gttaagtcaacaccacaaacatggtgcgctgcacgcttgagatcctgctttgtcaacagc 1542

                                                                        
Query: 618  ccatttacttgaccataagcaaatatagccatcgtcaatgattccaatcttcgacgtaaa 677
            ||||||||||  ||||||| ||| |||||||||| || ||  ||||||||||| || |||
Sbjct: 1541 ccatttactttcccataagtaaagatagccatcgccagtggctccaatcttcgtcgcaaa 1482

                                   
Query: 678  tccgcaaatgccttaaactcctc 700
            || ||||| |  |||||||||||
Sbjct: 1481 tcagcaaaggatttaaactcctc 1459



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 187  acacgatatttacagcaaaat 207
            |||||||||||||||||||||
Sbjct: 1882 acacgatatttacagcaaaat 1862
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>dbj|AK059306.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-G01, full
            insert sequence
          Length = 1800

 Score =  212 bits (107), Expect = 1e-51
 Identities = 224/263 (85%)
 Strand = Plus / Minus

                                                                        
Query: 438  gtcgctggctgatgaatatcggcttctcgtctttgaagtgctctcagaaactcccctgag 497
            |||||||||||| ||| ||| | |||||||||||| | |||||||| ||| ||| | |||
Sbjct: 1488 gtcgctggctgacgaacatcagtttctcgtctttgtaatgctctcacaaattcctccgag 1429

                                                                        
Query: 498  ctcaggtgcccatcattgttcgtgtcaaacacatggaaaatgatgtccaccactctgtca 557
            |||| || ||||||||  || || ||||||||||||||||||||||| || |||||||||
Sbjct: 1428 ctcaagttcccatcatgatttgtatcaaacacatggaaaatgatgtcaactactctgtca 1369

                                                                        
Query: 558  gttaattcaacaccacagacatgctgtgctgcacgcttcagatcctgctttgtcaattgc 617
            ||||| ||||||||||| ||||| || ||||||||||| |||||||||||||||||  ||
Sbjct: 1368 gttaagtcaacaccacaaacatggtgcgctgcacgcttgagatcctgctttgtcaacagc 1309

                                                                        
Query: 618  ccatttacttgaccataagcaaatatagccatcgtcaatgattccaatcttcgacgtaaa 677
            ||||||||||  ||||||| ||| |||||||||| || ||  ||||||||||| || |||
Sbjct: 1308 ccatttactttcccataagtaaagatagccatcgccagtggctccaatcttcgtcgcaaa 1249

                                   
Query: 678  tccgcaaatgccttaaactcctc 700
            || ||||| |  |||||||||||
Sbjct: 1248 tcagcaaaggatttaaactcctc 1226



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 187  acacgatatttacagcaaaat 207
            |||||||||||||||||||||
Sbjct: 1649 acacgatatttacagcaaaat 1629
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>gb|AY103950.1| Zea mays PCO137410 mRNA sequence
          Length = 823

 Score =  151 bits (76), Expect = 4e-33
 Identities = 184/220 (83%)
 Strand = Plus / Minus

                                                                       
Query: 495 gagctcaggtgcccatcattgttcgtgtcaaacacatggaaaatgatgtccaccactctg 554
           |||||||||| |||||| |  || ||||| |||||||||||||||||||| |||||||| 
Sbjct: 395 gagctcaggttcccatcctgatttgtgtcgaacacatggaaaatgatgtctaccactcta 336

                                                                       
Query: 555 tcagttaattcaacaccacagacatgctgtgctgcacgcttcagatcctgctttgtcaat 614
           |||||||| |  |||||||| ||||| |||| |||||| || ||||||| ||||||||||
Sbjct: 335 tcagttaagttgacaccacaaacatgttgtgttgcacgttttagatcctcctttgtcaat 276

                                                                       
Query: 615 tgcccatttacttgaccataagcaaatatagccatcgtcaatgattccaatcttcgacgt 674
              ||||| ||||  |||| |||||| |||||||||| || ||  ||||||||| | || 
Sbjct: 275 aatccattcactttcccatgagcaaagatagccatcgacagtggctccaatctttgtcgc 216

                                                   
Query: 675 aaatccgcaaatgccttaaactcctcaaacgtaatgcgta 714
           || || ||||||||||||||||||||||| || |||||||
Sbjct: 215 aagtcagcaaatgccttaaactcctcaaaggtgatgcgta 176
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  121 bits (61), Expect = 4e-24
 Identities = 118/137 (86%)
 Strand = Plus / Minus

                                                                            
Query: 438      gtcgctggctgatgaatatcggcttctcgtctttgaagtgctctcagaaactcccctgag 497
                |||||||||||| ||| ||| | |||||||||||| | |||||||| ||| ||| | |||
Sbjct: 25090004 gtcgctggctgacgaacatcagtttctcgtctttgtaatgctctcacaaattcctccgag 25089945

                                                                            
Query: 498      ctcaggtgcccatcattgttcgtgtcaaacacatggaaaatgatgtccaccactctgtca 557
                |||| || ||||||||  || || ||||||||||||||||||||||| || |||||||||
Sbjct: 25089944 ctcaagttcccatcatgatttgtatcaaacacatggaaaatgatgtcaactactctgtca 25089885

                                 
Query: 558      gttaattcaacaccaca 574
                ||||| |||||||||||
Sbjct: 25089884 gttaagtcaacaccaca 25089868



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 105/124 (84%)
 Strand = Plus / Minus

                                                                            
Query: 576      acatgctgtgctgcacgcttcagatcctgctttgtcaattgcccatttacttgaccataa 635
                ||||| || ||||||||||| |||||||||||||||||  ||||||||||||  ||||||
Sbjct: 25089647 acatggtgcgctgcacgcttgagatcctgctttgtcaacagcccatttactttcccataa 25089588

                                                                            
Query: 636      gcaaatatagccatcgtcaatgattccaatcttcgacgtaaatccgcaaatgccttaaac 695
                | ||| |||||||||| || ||  ||||||||||| || ||||| ||||| |  ||||||
Sbjct: 25089587 gtaaagatagccatcgccagtggctccaatcttcgtcgcaaatcagcaaaggatttaaac 25089528

                    
Query: 696      tcct 699
                ||||
Sbjct: 25089527 tcct 25089524



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 187      acacgatatttacagcaaaat 207
                |||||||||||||||||||||
Sbjct: 25090248 acacgatatttacagcaaaat 25090228
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>emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014K14,
             complete sequence
          Length = 150187

 Score =  121 bits (61), Expect = 4e-24
 Identities = 118/137 (86%)
 Strand = Plus / Minus

                                                                         
Query: 438   gtcgctggctgatgaatatcggcttctcgtctttgaagtgctctcagaaactcccctgag 497
             |||||||||||| ||| ||| | |||||||||||| | |||||||| ||| ||| | |||
Sbjct: 37431 gtcgctggctgacgaacatcagtttctcgtctttgtaatgctctcacaaattcctccgag 37372

                                                                         
Query: 498   ctcaggtgcccatcattgttcgtgtcaaacacatggaaaatgatgtccaccactctgtca 557
             |||| || ||||||||  || || ||||||||||||||||||||||| || |||||||||
Sbjct: 37371 ctcaagttcccatcatgatttgtatcaaacacatggaaaatgatgtcaactactctgtca 37312

                              
Query: 558   gttaattcaacaccaca 574
             ||||| |||||||||||
Sbjct: 37311 gttaagtcaacaccaca 37295



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 105/124 (84%)
 Strand = Plus / Minus

                                                                         
Query: 576   acatgctgtgctgcacgcttcagatcctgctttgtcaattgcccatttacttgaccataa 635
             ||||| || ||||||||||| |||||||||||||||||  ||||||||||||  ||||||
Sbjct: 37074 acatggtgcgctgcacgcttgagatcctgctttgtcaacagcccatttactttcccataa 37015

                                                                         
Query: 636   gcaaatatagccatcgtcaatgattccaatcttcgacgtaaatccgcaaatgccttaaac 695
             | ||| |||||||||| || ||  ||||||||||| || ||||| ||||| |  ||||||
Sbjct: 37014 gtaaagatagccatcgccagtggctccaatcttcgtcgcaaatcagcaaaggatttaaac 36955

                 
Query: 696   tcct 699
             ||||
Sbjct: 36954 tcct 36951



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 187   acacgatatttacagcaaaat 207
             |||||||||||||||||||||
Sbjct: 37675 acacgatatttacagcaaaat 37655
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>gb|AY110824.1| Zea mays CL23962_1 mRNA sequence
          Length = 630

 Score =  113 bits (57), Expect = 9e-22
 Identities = 154/185 (83%), Gaps = 1/185 (0%)
 Strand = Plus / Plus

                                                                       
Query: 519 gtgtcaaacacatggaaaatgatgtccaccactctgtcagttaattcaacaccacagaca 578
           ||||| |||||||||||||||||||| || ||||| || ||||| || || || || |||
Sbjct: 375 gtgtcgaacacatggaaaatgatgtctactactctatctgttaagtcgaccccgcaaaca 434

                                                                       
Query: 579 tgctgtgctgcacgcttcagatcctgctttgtcaattgcccatttacttgaccataagca 638
           || || |||||||| || ||||||| ||| ||||||  |||||| | || ||| ||||||
Sbjct: 435 tgttgcgctgcacgttttagatcctccttcgtcaataacccattcaatttaccgtaagca 494

                                                                       
Query: 639 aatatagccatcgtcaatgattccaatcttcgacgtaaatccgcaaatgccttaaactcc 698
           || |||||||||| || ||  ||||||||||| || ||||| ||||| ||||||||||||
Sbjct: 495 aagatagccatcgacagtggctccaatcttcgtcgcaaatcagcaaa-gccttaaactcc 553

                
Query: 699 tcaaa 703
           |||||
Sbjct: 554 tcaaa 558
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>gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence
          Length = 317137

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                          
Query: 486    aactcccctgagctcaggtgcccatcattgttcgtgtcaaacacatggaaaatgatgtcc 545
              |||||| ||||||||||||  ||||||  ||| |  ||||| ||||||||||| ||||||
Sbjct: 246337 aactcctctgagctcaggttaccatcacagttagcatcaaatacatggaaaattatgtcc 246278

                            
Query: 546    accactctgtcagt 559
              || ||| |||||||
Sbjct: 246277 actactttgtcagt 246264
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>gb|AC053527.8| Homo sapiens BAC clone RP11-692D12 from 4, complete sequence
          Length = 233250

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 549    actctgtcagttaattcaacaccacagac 577
              ||||||||| |||||||||||||||||||
Sbjct: 106478 actctgtcaattaattcaacaccacagac 106506
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>ref|XM_466698.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1711

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                        
Query: 525  aacacatggaaaatgatgtccaccactctgtcagttaattcaacaccacagacatgctgt 584
            |||||| ||||||||| |||||||||| | ||||| || || ||  |||| |||||   |
Sbjct: 1295 aacacaaggaaaatgacgtccaccactttatcagtcaagtccacttcacaaacatgagtt 1236

                                        
Query: 585  gctgcacgcttcagatcctgctttgtca 612
            |||||||| || ||||||||||| ||||
Sbjct: 1235 gctgcacgttttagatcctgcttggtca 1208



 Score = 44.1 bits (22), Expect = 0.66
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                          
Query: 681  gcaaatgccttaaactcctcaaacgtaatgcgtaagtgcttgagat 726
            ||||| ||||| ||||||||||| |||||||| || | ||||||||
Sbjct: 1139 gcaaaagccttgaactcctcaaaggtaatgcgcaaatccttgagat 1094
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>dbj|AK066756.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075K23, full
            insert sequence
          Length = 1710

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                        
Query: 525  aacacatggaaaatgatgtccaccactctgtcagttaattcaacaccacagacatgctgt 584
            |||||| ||||||||| |||||||||| | ||||| || || ||  |||| |||||   |
Sbjct: 1294 aacacaaggaaaatgacgtccaccactttatcagtcaagtccacttcacaaacatgagtt 1235

                                        
Query: 585  gctgcacgcttcagatcctgctttgtca 612
            |||||||| || ||||||||||| ||||
Sbjct: 1234 gctgcacgttttagatcctgcttggtca 1207



 Score = 44.1 bits (22), Expect = 0.66
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                          
Query: 681  gcaaatgccttaaactcctcaaacgtaatgcgtaagtgcttgagat 726
            ||||| ||||| ||||||||||| |||||||| || | ||||||||
Sbjct: 1138 gcaaaagccttgaactcctcaaaggtaatgcgcaaatccttgagat 1093
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>emb|AJ337129.1|HSA337129 Homo sapiens genomic sequence surrounding NotI site, clone NL4-BO5R
          Length = 686

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 210 actcccagtcctgagcagtaac 231
           ||||||||||||||||||||||
Sbjct: 292 actcccagtcctgagcagtaac 313
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>gb|BC081137.1| Xenopus laevis MGC83957 protein, mRNA (cDNA clone MGC:83957
           IMAGE:6862393), complete cds
          Length = 3593

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 129 gagactctgagagagcacacc 149
           |||||||||||||||||||||
Sbjct: 83  gagactctgagagagcacacc 103
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>ref|XM_824192.1| Trypanosoma brucei TREU927 heat shock protein HslVU ATPase subunit
           (Tb11.01.4050) partial mRNA
          Length = 1491

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 688 ccttaaactcctcaaacgtaa 708
           |||||||||||||||||||||
Sbjct: 634 ccttaaactcctcaaacgtaa 614
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>emb|AL691497.8| Human DNA sequence from clone RP11-542C10 on chromosome 1 Contains
              putative novel transcript, complete sequence
          Length = 174648

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 326    acccaaggcttaagaagaaaaatct 350
              ||||| |||||||||||||||||||
Sbjct: 121682 acccatggcttaagaagaaaaatct 121706
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>emb|AL607152.21| Mouse DNA sequence from clone RP23-198N14 on chromosome 11, complete
              sequence
          Length = 232408

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 65     aggtttgaaacttaacaccta 85
              |||||||||||||||||||||
Sbjct: 170379 aggtttgaaacttaacaccta 170359
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>gb|AC116499.9| Mus musculus chromosome 8, clone RP24-294M17, complete sequence
          Length = 159272

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 116    tcacccatgtactgagactctgaga 140
              ||||||||| |||||||||||||||
Sbjct: 151187 tcacccatgaactgagactctgaga 151163
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>emb|BX936364.6| Zebrafish DNA sequence from clone CH211-247G11 in linkage group 18,
             complete sequence
          Length = 146733

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 523   caaacacatggaaaatgatgt 543
             |||||||||||||||||||||
Sbjct: 48535 caaacacatggaaaatgatgt 48555
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>emb|AL954652.3| Zebrafish DNA sequence from clone CH211-239O15 in linkage group 4,
             complete sequence
          Length = 152900

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 30    ataaatacataaaaatggaac 50
             |||||||||||||||||||||
Sbjct: 41829 ataaatacataaaaatggaac 41809
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>gb|AC138677.8| Mus musculus chromosome 8, clone RP23-366O14, complete sequence
          Length = 208995

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 116   tcacccatgtactgagactctgaga 140
             ||||||||| |||||||||||||||
Sbjct: 24857 tcacccatgaactgagactctgaga 24833
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>gb|AC135015.3| Mus musculus BAC clone RP24-227L14 from 8, complete sequence
          Length = 169193

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 18     gaaatgctgtctataaatacataaa 42
              ||||||||||||||||||| |||||
Sbjct: 133486 gaaatgctgtctataaataaataaa 133462
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>gb|AC126930.4| Mus musculus BAC clone RP24-547J4 from 8, complete sequence
          Length = 191241

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 18    gaaatgctgtctataaatacataaa 42
             ||||||||||||||||||| |||||
Sbjct: 23645 gaaatgctgtctataaataaataaa 23621
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>tpe|BN000068.1|TBR000068 TPA: TPA_inf: Trypanosoma brucei hslU gene for regulatory subunit
           of HslVU complex
          Length = 1878

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 688 ccttaaactcctcaaacgtaa 708
           |||||||||||||||||||||
Sbjct: 857 ccttaaactcctcaaacgtaa 837
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>emb|AL663088.10| Mouse DNA sequence from clone RP23-293H17 on chromosome 11, complete
             sequence
          Length = 243290

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    aggtttgaaacttaacaccta 85
             |||||||||||||||||||||
Sbjct: 10664 aggtttgaaacttaacaccta 10684


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,929,664
Number of Sequences: 3902068
Number of extensions: 6929664
Number of successful extensions: 141400
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 141299
Number of HSP's gapped (non-prelim): 100
length of query: 748
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 725
effective length of database: 17,143,297,704
effective search space: 12428890835400
effective search space used: 12428890835400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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