ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd27m04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_493889.1| Oryza sativa (japonica cultivar-group), predic... 157 5e-35
2gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome... 157 5e-35
3gb|AC079022.2|AC079022 Oryza sativa chromosome 5 clone P0574H01,... 157 5e-35
4dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 157 5e-35
5dbj|AK073169.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 5e-35
6gb|AY106357.1| Zea mays PCO078250 mRNA sequence 129 1e-26
7gb|DQ430561.1| Sorghum propinquum locus S0078 genomic sequence 121 3e-24
8gb|DQ430560.1| Sorghum bicolor voucher PI585454 locus S0078 geno... 98 4e-17
9gb|DQ430559.1| Sorghum bicolor voucher PI267539 locus S0078 geno... 98 4e-17
10gb|DQ430558.1| Sorghum bicolor voucher PI267408 locus S0078 geno... 98 4e-17
11gb|DQ430557.1| Sorghum bicolor voucher PI221607 locus S0078 geno... 98 4e-17
12gb|DQ430556.1| Sorghum bicolor voucher PI152702 locus S0078 geno... 98 4e-17
13gb|DQ430555.1| Sorghum bicolor voucher NSL92371 locus S0078 geno... 98 4e-17
14gb|DQ430554.1| Sorghum bicolor voucher NSL87902 locus S0078 geno... 98 4e-17
15gb|DQ430553.1| Sorghum bicolor voucher NSL87666 locus S0078 geno... 98 4e-17
16gb|DQ430552.1| Sorghum bicolor voucher NSL77217 locus S0078 geno... 98 4e-17
17gb|DQ430551.1| Sorghum bicolor voucher NSL77034 locus S0078 geno... 98 4e-17
18gb|DQ430550.1| Sorghum bicolor voucher NSL56174 locus S0078 geno... 98 4e-17
19gb|DQ430549.1| Sorghum bicolor voucher NSL56003 locus S0078 geno... 98 4e-17
20gb|DQ430548.1| Sorghum bicolor voucher NSL55243 locus S0078 geno... 98 4e-17
21gb|DQ430547.1| Sorghum bicolor voucher NSL51365 locus S0078 geno... 98 4e-17
22gb|DQ430546.1| Sorghum bicolor voucher NSL51030 locus S0078 geno... 98 4e-17
23gb|DQ430545.1| Sorghum bicolor voucher NSL50875 locus S0078 geno... 98 4e-17
24gb|DQ430544.1| Sorghum bicolor voucher BTx623 locus S0078 genomi... 98 4e-17
25ref|NM_189481.1| Oryza sativa (japonica cultivar-group), predic... 76 1e-10
26dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
27dbj|AP003298.3| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
28dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
29dbj|AK069546.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
30ref|XM_470532.1| Oryza sativa (japonica cultivar-group), predic... 52 0.002
31gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 52 0.002
32dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
33gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
34dbj|AK107046.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
35gb|AF044807.1|AF044807 Lampetra planeri homeobox protein LpHox8A... 46 0.12
36dbj|AB125274.1| Lethenteron japonicum mRNA for LjHoxQ8 Homeobox,... 46 0.12
37gb|AF035591.1|PMHOXQ2 Petromyzon marinus homeobox protein HoxQ8 ... 46 0.12
38gb|AF035589.1|AF035589 Petromyzon marinus homeobox protein HoxQ8... 46 0.12
39gb|L14903.1|FSAHOXP60R Petromyzon marinus (clone Pm60-r) homeobo... 46 0.12
40gb|L14901.1|FSAHOXP57Q Petromyzon marinus (clone Pm57-q) homeobo... 46 0.12
41ref|XM_953832.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.48
42ref|XM_332037.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.48
43gb|AC107315.1| Genomic sequence for Oryza sativa, Nipponbare str... 44 0.48
44gb|AC137698.1| Genomic sequence for Oryza sativa, Nipponbare str... 44 0.48
45dbj|AK102905.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.48
46gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 42 1.9
47gb|AC147565.4| Mus musculus BAC clone RP23-116P18 from 9, comple... 42 1.9
48ref|XM_470172.1| Oryza sativa (japonica cultivar-group), predic... 40 7.4
49gb|AY596292.1| Haloarcula marismortui ATCC 43049 plasmid pNG300,... 40 7.4
50gb|AC136448.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.4
51gb|AC123662.13| Mus musculus chromosome 5, clone RP23-213N8, com... 40 7.4
52gb|AC102916.5| Mus musculus chromosome 5, clone RP24-274I18, com... 40 7.4
53ref|XM_655255.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 7.4
54gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 7.4
55gb|AC163027.5| Mus musculus chromosome 5, clone RP23-396H22, com... 40 7.4
56emb|CR769775.11| Human DNA sequence from clone RP11-449H15 on ch... 40 7.4
57gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 7.4
58emb|AL391987.15| Human DNA sequence from clone RP11-374M1 on chr... 40 7.4
59emb|AL355151.11| Human DNA sequence from clone RP11-288C24 on ch... 40 7.4
60gb|AC098693.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.4
61gb|AC093814.3| Homo sapiens BAC clone RP11-362I16 from 4, comple... 40 7.4
62dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
63gb|AC118598.8| Mus musculus chromosome 5, clone RP23-446M13, com... 40 7.4
64dbj|AK109138.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.4
65gb|AF127374.1|AF127374 Streptomyces lavendulae LinA homolog, cyt... 40 7.4
66gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.4
67dbj|AP006116.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 7.4
68dbj|AP004901.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 7.4
69emb|AL627306.15| Human DNA sequence from clone RP11-81A9 on chro... 40 7.4 
>ref|XM_493889.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1188

 Score =  157 bits (79), Expect = 5e-35
 Identities = 169/199 (84%)
 Strand = Plus / Minus

                                                                        
Query: 347  acctgctccatgctcggcctgtgcctcgagtccgctgagaggcattgaagcgccagtgac 406
            |||||||||||| | ||||||| | | |  ||| | |||| ||||||||| |||||||  
Sbjct: 1043 acctgctccatgttaggcctgttcttggcctccacagagatgcattgaagtgccagtgtt 984

                                                                        
Query: 407  gctgtcttctgggccttggcgagggagtactgcccgcccagacgggggtccagcacgcgg 466
            || | ||||||||||||||| |||||||||||||||||||  |||| |||||| | ||||
Sbjct: 983  gcagccttctgggccttggcaagggagtactgcccgcccaaccgggcgtccaggatgcgg 924

                                                                        
Query: 467  aagatgcgccgcttgctcgtcaggtacggtcgcgcccactccaccaggttgtgctcgccg 526
            |||||||||||||||||| ||||||| || |  |||||||||||||| |||||||| |||
Sbjct: 923  aagatgcgccgcttgctcatcaggtatggcctagcccactccaccagattgtgctccccg 864

                               
Query: 527  gttggctggttcttgtcca 545
            |||||  ||||||||||||
Sbjct: 863  gttgggcggttcttgtcca 845
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>gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0016H04,
             complete sequence
          Length = 176678

 Score =  157 bits (79), Expect = 5e-35
 Identities = 169/199 (84%)
 Strand = Plus / Plus

                                                                         
Query: 347   acctgctccatgctcggcctgtgcctcgagtccgctgagaggcattgaagcgccagtgac 406
             |||||||||||| | ||||||| | | |  ||| | |||| ||||||||| |||||||  
Sbjct: 63678 acctgctccatgttaggcctgttcttggcctccacagagatgcattgaagtgccagtgtt 63737

                                                                         
Query: 407   gctgtcttctgggccttggcgagggagtactgcccgcccagacgggggtccagcacgcgg 466
             || | ||||||||||||||| |||||||||||||||||||  |||| |||||| | ||||
Sbjct: 63738 gcagccttctgggccttggcaagggagtactgcccgcccaaccgggcgtccaggatgcgg 63797

                                                                         
Query: 467   aagatgcgccgcttgctcgtcaggtacggtcgcgcccactccaccaggttgtgctcgccg 526
             |||||||||||||||||| ||||||| || |  |||||||||||||| |||||||| |||
Sbjct: 63798 aagatgcgccgcttgctcatcaggtatggcctagcccactccaccagattgtgctccccg 63857

                                
Query: 527   gttggctggttcttgtcca 545
             |||||  ||||||||||||
Sbjct: 63858 gttgggcggttcttgtcca 63876
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>gb|AC079022.2|AC079022 Oryza sativa chromosome 5 clone P0574H01, complete sequence
          Length = 151589

 Score =  157 bits (79), Expect = 5e-35
 Identities = 169/199 (84%)
 Strand = Plus / Plus

                                                                          
Query: 347    acctgctccatgctcggcctgtgcctcgagtccgctgagaggcattgaagcgccagtgac 406
              |||||||||||| | ||||||| | | |  ||| | |||| ||||||||| |||||||  
Sbjct: 146077 acctgctccatgttaggcctgttcttggcctccacagagatgcattgaagtgccagtgtt 146136

                                                                          
Query: 407    gctgtcttctgggccttggcgagggagtactgcccgcccagacgggggtccagcacgcgg 466
              || | ||||||||||||||| |||||||||||||||||||  |||| |||||| | ||||
Sbjct: 146137 gcagccttctgggccttggcaagggagtactgcccgcccaaccgggcgtccaggatgcgg 146196

                                                                          
Query: 467    aagatgcgccgcttgctcgtcaggtacggtcgcgcccactccaccaggttgtgctcgccg 526
              |||||||||||||||||| ||||||| || |  |||||||||||||| |||||||| |||
Sbjct: 146197 aagatgcgccgcttgctcatcaggtatggcctagcccactccaccagattgtgctccccg 146256

                                 
Query: 527    gttggctggttcttgtcca 545
              |||||  ||||||||||||
Sbjct: 146257 gttgggcggttcttgtcca 146275
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score =  157 bits (79), Expect = 5e-35
 Identities = 169/199 (84%)
 Strand = Plus / Plus

                                                                          
Query: 347    acctgctccatgctcggcctgtgcctcgagtccgctgagaggcattgaagcgccagtgac 406
              |||||||||||| | ||||||| | | |  ||| | |||| ||||||||| |||||||  
Sbjct: 546279 acctgctccatgttaggcctgttcttggcctccacagagatgcattgaagtgccagtgtt 546338

                                                                          
Query: 407    gctgtcttctgggccttggcgagggagtactgcccgcccagacgggggtccagcacgcgg 466
              || | ||||||||||||||| |||||||||||||||||||  |||| |||||| | ||||
Sbjct: 546339 gcagccttctgggccttggcaagggagtactgcccgcccaaccgggcgtccaggatgcgg 546398

                                                                          
Query: 467    aagatgcgccgcttgctcgtcaggtacggtcgcgcccactccaccaggttgtgctcgccg 526
              |||||||||||||||||| ||||||| || |  |||||||||||||| |||||||| |||
Sbjct: 546399 aagatgcgccgcttgctcatcaggtatggcctagcccactccaccagattgtgctccccg 546458

                                 
Query: 527    gttggctggttcttgtcca 545
              |||||  ||||||||||||
Sbjct: 546459 gttgggcggttcttgtcca 546477
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>dbj|AK073169.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033020B11, full
            insert sequence
          Length = 2039

 Score =  157 bits (79), Expect = 5e-35
 Identities = 169/199 (84%)
 Strand = Plus / Minus

                                                                        
Query: 347  acctgctccatgctcggcctgtgcctcgagtccgctgagaggcattgaagcgccagtgac 406
            |||||||||||| | ||||||| | | |  ||| | |||| ||||||||| |||||||  
Sbjct: 1595 acctgctccatgttaggcctgttcttggcctccacagagatgcattgaagtgccagtgtt 1536

                                                                        
Query: 407  gctgtcttctgggccttggcgagggagtactgcccgcccagacgggggtccagcacgcgg 466
            || | ||||||||||||||| |||||||||||||||||||  |||| |||||| | ||||
Sbjct: 1535 gcagccttctgggccttggcaagggagtactgcccgcccaaccgggcgtccaggatgcgg 1476

                                                                        
Query: 467  aagatgcgccgcttgctcgtcaggtacggtcgcgcccactccaccaggttgtgctcgccg 526
            |||||||||||||||||| ||||||| || |  |||||||||||||| |||||||| |||
Sbjct: 1475 aagatgcgccgcttgctcatcaggtatggcctagcccactccaccagattgtgctccccg 1416

                               
Query: 527  gttggctggttcttgtcca 545
            |||||  ||||||||||||
Sbjct: 1415 gttgggcggttcttgtcca 1397
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>gb|AY106357.1| Zea mays PCO078250 mRNA sequence
          Length = 2030

 Score =  129 bits (65), Expect = 1e-26
 Identities = 161/193 (83%)
 Strand = Plus / Minus

                                                                        
Query: 353  tccatgctcggcctgtgcctcgagtccgctgagaggcattgaagcgccagtgacgctgtc 412
            |||||||| ||||||||||| || ||| | ||||||||||| || || || | ||| | |
Sbjct: 1556 tccatgctgggcctgtgcctggactccaccgagaggcattgcagggcgagcgccgcagcc 1497

                                                                        
Query: 413  ttctgggccttggcgagggagtactgcccgcccagacgggggtccagcacgcggaagatg 472
            ||||| ||| |||| |||||||||||||||||||| || |||||||| | ||| || |||
Sbjct: 1496 ttctgcgccctggcaagggagtactgcccgcccagccgtgggtccaggatgcgaaatatg 1437

                                                                        
Query: 473  cgccgcttgctcgtcaggtacggtcgcgcccactccaccaggttgtgctcgccggttggc 532
            |||||||||||  ||||||| || |  ||||||||||||||||||||||| ||| | || 
Sbjct: 1436 cgccgcttgcttctcaggtatggcctagcccactccaccaggttgtgctccccgttcggg 1377

                         
Query: 533  tggttcttgtcca 545
             ||||||||||||
Sbjct: 1376 cggttcttgtcca 1364
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>gb|DQ430561.1| Sorghum propinquum locus S0078 genomic sequence
          Length = 580

 Score =  121 bits (61), Expect = 3e-24
 Identities = 160/193 (82%)
 Strand = Plus / Minus

                                                                       
Query: 353 tccatgctcggcctgtgcctcgagtccgctgagaggcattgaagcgccagtgacgctgtc 412
           |||||||| ||||||||||| || ||| ||||||||||||| |  || ||||| || | |
Sbjct: 518 tccatgctgggcctgtgcctggactccactgagaggcattgcaatgcgagtgatgcagcc 459

                                                                       
Query: 413 ttctgggccttggcgagggagtactgcccgcccagacgggggtccagcacgcggaagatg 472
           ||||| ||| | || |||||||||||||| ||||| ||||||||||| | ||| || |||
Sbjct: 458 ttctgcgccctagcaagggagtactgcccacccagccgggggtccaggatgcgaaatatg 399

                                                                       
Query: 473 cgccgcttgctcgtcaggtacggtcgcgcccactccaccaggttgtgctcgccggttggc 532
           |||||||| ||  ||||||| || |  ||||||||||||||||||||||| ||  |||| 
Sbjct: 398 cgccgcttacttctcaggtatggcctagcccactccaccaggttgtgctccccatttggg 339

                        
Query: 533 tggttcttgtcca 545
            ||||||||||||
Sbjct: 338 cggttcttgtcca 326
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>gb|DQ430560.1| Sorghum bicolor voucher PI585454 locus S0078 genomic sequence
          Length = 579

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 157/193 (81%)
 Strand = Plus / Minus

                                                                       
Query: 353 tccatgctcggcctgtgcctcgagtccgctgagaggcattgaagcgccagtgacgctgtc 412
           |||||||| ||||||||||| || ||| ||||||||||||| |  || || |  || | |
Sbjct: 517 tccatgctgggcctgtgcctggactccactgagaggcattgcaatgcgagcgctgcagcc 458

                                                                       
Query: 413 ttctgggccttggcgagggagtactgcccgcccagacgggggtccagcacgcggaagatg 472
           ||||| ||| | || |||||||||||||| ||||| ||||||||||| | ||| || |||
Sbjct: 457 ttctgcgccctagcaagggagtactgcccacccagccgggggtccaggatgcgaaatatg 398

                                                                       
Query: 473 cgccgcttgctcgtcaggtacggtcgcgcccactccaccaggttgtgctcgccggttggc 532
           ||||| || ||  ||||||| || |  ||||||||||||||||||||||| ||  |||| 
Sbjct: 397 cgccgtttacttctcaggtatggcctagcccactccaccaggttgtgctccccatttggg 338

                        
Query: 533 tggttcttgtcca 545
            ||||||||||||
Sbjct: 337 cggttcttgtcca 325
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>gb|DQ430559.1| Sorghum bicolor voucher PI267539 locus S0078 genomic sequence
          Length = 580

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 157/193 (81%)
 Strand = Plus / Minus

                                                                       
Query: 353 tccatgctcggcctgtgcctcgagtccgctgagaggcattgaagcgccagtgacgctgtc 412
           |||||||| ||||||||||| || ||| ||||||||||||| |  || || |  || | |
Sbjct: 518 tccatgctgggcctgtgcctggactccactgagaggcattgcaatgcgagcgctgcagcc 459

                                                                       
Query: 413 ttctgggccttggcgagggagtactgcccgcccagacgggggtccagcacgcggaagatg 472
           ||||| ||| | || |||||||||||||| ||||| ||||||||||| | ||| || |||
Sbjct: 458 ttctgcgccctagcaagggagtactgcccacccagccgggggtccaggatgcgaaatatg 399

                                                                       
Query: 473 cgccgcttgctcgtcaggtacggtcgcgcccactccaccaggttgtgctcgccggttggc 532
           |||| ||| ||  ||||||| || |  ||||||||||||||||||||||| ||  |||| 
Sbjct: 398 cgcctcttacttctcaggtatggcctagcccactccaccaggttgtgctccccatttggg 339

                        
Query: 533 tggttcttgtcca 545
            ||||||||||||
Sbjct: 338 cggttcttgtcca 326
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>gb|DQ430558.1| Sorghum bicolor voucher PI267408 locus S0078 genomic sequence
          Length = 579

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 157/193 (81%)
 Strand = Plus / Minus

                                                                       
Query: 353 tccatgctcggcctgtgcctcgagtccgctgagaggcattgaagcgccagtgacgctgtc 412
           |||||||| ||||||||||| || ||| ||||||||||||| |  || || |  || | |
Sbjct: 517 tccatgctgggcctgtgcctggactccactgagaggcattgcaatgcgagcgctgcagcc 458

                                                                       
Query: 413 ttctgggccttggcgagggagtactgcccgcccagacgggggtccagcacgcggaagatg 472
           ||||| ||| | || |||||||||||||| ||||| ||||||||||| | ||| || |||
Sbjct: 457 ttctgcgccctagcaagggagtactgcccacccagccgggggtccaggatgcgaaatatg 398

                                                                       
Query: 473 cgccgcttgctcgtcaggtacggtcgcgcccactccaccaggttgtgctcgccggttggc 532
           ||||| || ||  ||||||| || |  ||||||||||||||||||||||| ||  |||| 
Sbjct: 397 cgccgtttacttctcaggtatggcctagcccactccaccaggttgtgctccccatttggg 338

                        
Query: 533 tggttcttgtcca 545
            ||||||||||||
Sbjct: 337 cggttcttgtcca 325
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>gb|DQ430557.1| Sorghum bicolor voucher PI221607 locus S0078 genomic sequence
          Length = 579

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 157/193 (81%)
 Strand = Plus / Minus

                                                                       
Query: 353 tccatgctcggcctgtgcctcgagtccgctgagaggcattgaagcgccagtgacgctgtc 412
           |||||||| ||||||||||| || ||| ||||||||||||| |  || || |  || | |
Sbjct: 517 tccatgctgggcctgtgcctggactccactgagaggcattgcaatgcgagcgctgcagcc 458

                                                                       
Query: 413 ttctgggccttggcgagggagtactgcccgcccagacgggggtccagcacgcggaagatg 472
           ||||| ||| | || |||||||||||||| ||||| ||||||||||| | ||| || |||
Sbjct: 457 ttctgcgccctagcaagggagtactgcccacccagccgggggtccaggatgcgaaatatg 398

                                                                       
Query: 473 cgccgcttgctcgtcaggtacggtcgcgcccactccaccaggttgtgctcgccggttggc 532
           ||||| || ||  ||||||| || |  ||||||||||||||||||||||| ||  |||| 
Sbjct: 397 cgccgtttacttctcaggtatggcctagcccactccaccaggttgtgctccccatttggg 338

                        
Query: 533 tggttcttgtcca 545
            ||||||||||||
Sbjct: 337 cggttcttgtcca 325
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>gb|DQ430556.1| Sorghum bicolor voucher PI152702 locus S0078 genomic sequence
          Length = 579

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 157/193 (81%)
 Strand = Plus / Minus

                                                                       
Query: 353 tccatgctcggcctgtgcctcgagtccgctgagaggcattgaagcgccagtgacgctgtc 412
           |||||||| ||||||||||| || ||| ||||||||||||| |  || || |  || | |
Sbjct: 517 tccatgctgggcctgtgcctggactccactgagaggcattgcaatgcgagcgctgcagcc 458

                                                                       
Query: 413 ttctgggccttggcgagggagtactgcccgcccagacgggggtccagcacgcggaagatg 472
           ||||| ||| | || |||||||||||||| ||||| ||||||||||| | ||| || |||
Sbjct: 457 ttctgcgccctagcaagggagtactgcccacccagccgggggtccaggatgcgaaatatg 398

                                                                       
Query: 473 cgccgcttgctcgtcaggtacggtcgcgcccactccaccaggttgtgctcgccggttggc 532
           ||||| || ||  ||||||| || |  ||||||||||||||||||||||| ||  |||| 
Sbjct: 397 cgccgtttacttctcaggtatggcctagcccactccaccaggttgtgctccccatttggg 338

                        
Query: 533 tggttcttgtcca 545
            ||||||||||||
Sbjct: 337 cggttcttgtcca 325
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>gb|DQ430555.1| Sorghum bicolor voucher NSL92371 locus S0078 genomic sequence
          Length = 579

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 157/193 (81%)
 Strand = Plus / Minus

                                                                       
Query: 353 tccatgctcggcctgtgcctcgagtccgctgagaggcattgaagcgccagtgacgctgtc 412
           |||||||| ||||||||||| || ||| ||||||||||||| |  || || |  || | |
Sbjct: 517 tccatgctgggcctgtgcctggactccactgagaggcattgcaatgcgagcgctgcagcc 458

                                                                       
Query: 413 ttctgggccttggcgagggagtactgcccgcccagacgggggtccagcacgcggaagatg 472
           ||||| ||| | || |||||||||||||| ||||| ||||||||||| | ||| || |||
Sbjct: 457 ttctgcgccctagcaagggagtactgcccacccagccgggggtccaggatgcgaaatatg 398

                                                                       
Query: 473 cgccgcttgctcgtcaggtacggtcgcgcccactccaccaggttgtgctcgccggttggc 532
           ||||| || ||  ||||||| || |  ||||||||||||||||||||||| ||  |||| 
Sbjct: 397 cgccgtttacttctcaggtatggcctagcccactccaccaggttgtgctccccatttggg 338

                        
Query: 533 tggttcttgtcca 545
            ||||||||||||
Sbjct: 337 cggttcttgtcca 325
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>gb|DQ430554.1| Sorghum bicolor voucher NSL87902 locus S0078 genomic sequence
          Length = 579

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 157/193 (81%)
 Strand = Plus / Minus

                                                                       
Query: 353 tccatgctcggcctgtgcctcgagtccgctgagaggcattgaagcgccagtgacgctgtc 412
           |||||||| ||||||||||| || ||| ||||||||||||| |  || || |  || | |
Sbjct: 517 tccatgctgggcctgtgcctggactccactgagaggcattgcaatgcgagcgctgcagcc 458

                                                                       
Query: 413 ttctgggccttggcgagggagtactgcccgcccagacgggggtccagcacgcggaagatg 472
           ||||| ||| | || |||||||||||||| ||||| ||||||||||| | ||| || |||
Sbjct: 457 ttctgcgccctagcaagggagtactgcccacccagccgggggtccaggatgcgaaatatg 398

                                                                       
Query: 473 cgccgcttgctcgtcaggtacggtcgcgcccactccaccaggttgtgctcgccggttggc 532
           ||||| || ||  ||||||| || |  ||||||||||||||||||||||| ||  |||| 
Sbjct: 397 cgccgtttacttctcaggtatggcctagcccactccaccaggttgtgctccccatttggg 338

                        
Query: 533 tggttcttgtcca 545
            ||||||||||||
Sbjct: 337 cggttcttgtcca 325
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>gb|DQ430553.1| Sorghum bicolor voucher NSL87666 locus S0078 genomic sequence
          Length = 579

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 157/193 (81%)
 Strand = Plus / Minus

                                                                       
Query: 353 tccatgctcggcctgtgcctcgagtccgctgagaggcattgaagcgccagtgacgctgtc 412
           |||||||| ||||||||||| || ||| ||||||||||||| |  || || |  || | |
Sbjct: 517 tccatgctgggcctgtgcctggactccactgagaggcattgcaatgcgagcgctgcagcc 458

                                                                       
Query: 413 ttctgggccttggcgagggagtactgcccgcccagacgggggtccagcacgcggaagatg 472
           ||||| ||| | || |||||||||||||| ||||| ||||||||||| | ||| || |||
Sbjct: 457 ttctgcgccctagcaagggagtactgcccacccagccgggggtccaggatgcgaaatatg 398

                                                                       
Query: 473 cgccgcttgctcgtcaggtacggtcgcgcccactccaccaggttgtgctcgccggttggc 532
           ||||| || ||  ||||||| || |  ||||||||||||||||||||||| ||  |||| 
Sbjct: 397 cgccgtttacttctcaggtatggcctagcccactccaccaggttgtgctccccatttggg 338

                        
Query: 533 tggttcttgtcca 545
            ||||||||||||
Sbjct: 337 cggttcttgtcca 325
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>gb|DQ430552.1| Sorghum bicolor voucher NSL77217 locus S0078 genomic sequence
          Length = 579

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 157/193 (81%)
 Strand = Plus / Minus

                                                                       
Query: 353 tccatgctcggcctgtgcctcgagtccgctgagaggcattgaagcgccagtgacgctgtc 412
           |||||||| ||||||||||| || ||| ||||||||||||| |  || || |  || | |
Sbjct: 517 tccatgctgggcctgtgcctggactccactgagaggcattgcaatgcgagcgctgcagcc 458

                                                                       
Query: 413 ttctgggccttggcgagggagtactgcccgcccagacgggggtccagcacgcggaagatg 472
           ||||| ||| | || |||||||||||||| ||||| ||||||||||| | ||| || |||
Sbjct: 457 ttctgcgccctagcaagggagtactgcccacccagccgggggtccaggatgcgaaatatg 398

                                                                       
Query: 473 cgccgcttgctcgtcaggtacggtcgcgcccactccaccaggttgtgctcgccggttggc 532
           ||||| || ||  ||||||| || |  ||||||||||||||||||||||| ||  |||| 
Sbjct: 397 cgccgtttacttctcaggtatggcctagcccactccaccaggttgtgctccccatttggg 338

                        
Query: 533 tggttcttgtcca 545
            ||||||||||||
Sbjct: 337 cggttcttgtcca 325
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>gb|DQ430551.1| Sorghum bicolor voucher NSL77034 locus S0078 genomic sequence
          Length = 579

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 157/193 (81%)
 Strand = Plus / Minus

                                                                       
Query: 353 tccatgctcggcctgtgcctcgagtccgctgagaggcattgaagcgccagtgacgctgtc 412
           |||||||| ||||||||||| || ||| ||||||||||||| |  || || |  || | |
Sbjct: 517 tccatgctgggcctgtgcctggactccactgagaggcattgcaatgcgagcgctgcagcc 458

                                                                       
Query: 413 ttctgggccttggcgagggagtactgcccgcccagacgggggtccagcacgcggaagatg 472
           ||||| ||| | || |||||||||||||| ||||| ||||||||||| | ||| || |||
Sbjct: 457 ttctgcgccctagcaagggagtactgcccacccagccgggggtccaggatgcgaaatatg 398

                                                                       
Query: 473 cgccgcttgctcgtcaggtacggtcgcgcccactccaccaggttgtgctcgccggttggc 532
           ||||| || ||  ||||||| || |  ||||||||||||||||||||||| ||  |||| 
Sbjct: 397 cgccgtttacttctcaggtatggcctagcccactccaccaggttgtgctccccatttggg 338

                        
Query: 533 tggttcttgtcca 545
            ||||||||||||
Sbjct: 337 cggttcttgtcca 325
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>gb|DQ430550.1| Sorghum bicolor voucher NSL56174 locus S0078 genomic sequence
          Length = 579

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 157/193 (81%)
 Strand = Plus / Minus

                                                                       
Query: 353 tccatgctcggcctgtgcctcgagtccgctgagaggcattgaagcgccagtgacgctgtc 412
           |||||||| ||||||||||| || ||| ||||||||||||| |  || || |  || | |
Sbjct: 517 tccatgctgggcctgtgcctggactccactgagaggcattgcaatgcgagcgctgcagcc 458

                                                                       
Query: 413 ttctgggccttggcgagggagtactgcccgcccagacgggggtccagcacgcggaagatg 472
           ||||| ||| | || |||||||||||||| ||||| ||||||||||| | ||| || |||
Sbjct: 457 ttctgcgccctagcaagggagtactgcccacccagccgggggtccaggatgcgaaatatg 398

                                                                       
Query: 473 cgccgcttgctcgtcaggtacggtcgcgcccactccaccaggttgtgctcgccggttggc 532
           ||||| || ||  ||||||| || |  ||||||||||||||||||||||| ||  |||| 
Sbjct: 397 cgccgtttacttctcaggtatggcctagcccactccaccaggttgtgctccccatttggg 338

                        
Query: 533 tggttcttgtcca 545
            ||||||||||||
Sbjct: 337 cggttcttgtcca 325
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>gb|DQ430549.1| Sorghum bicolor voucher NSL56003 locus S0078 genomic sequence
          Length = 579

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 157/193 (81%)
 Strand = Plus / Minus

                                                                       
Query: 353 tccatgctcggcctgtgcctcgagtccgctgagaggcattgaagcgccagtgacgctgtc 412
           |||||||| ||||||||||| || ||| ||||||||||||| |  || || |  || | |
Sbjct: 517 tccatgctgggcctgtgcctggactccactgagaggcattgcaatgcgagcgctgcagcc 458

                                                                       
Query: 413 ttctgggccttggcgagggagtactgcccgcccagacgggggtccagcacgcggaagatg 472
           ||||| ||| | || |||||||||||||| ||||| ||||||||||| | ||| || |||
Sbjct: 457 ttctgcgccctagcaagggagtactgcccacccagccgggggtccaggatgcgaaatatg 398

                                                                       
Query: 473 cgccgcttgctcgtcaggtacggtcgcgcccactccaccaggttgtgctcgccggttggc 532
           ||||| || ||  ||||||| || |  ||||||||||||||||||||||| ||  |||| 
Sbjct: 397 cgccgtttacttctcaggtatggcctagcccactccaccaggttgtgctccccatttggg 338

                        
Query: 533 tggttcttgtcca 545
            ||||||||||||
Sbjct: 337 cggttcttgtcca 325
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>gb|DQ430548.1| Sorghum bicolor voucher NSL55243 locus S0078 genomic sequence
          Length = 579

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 157/193 (81%)
 Strand = Plus / Minus

                                                                       
Query: 353 tccatgctcggcctgtgcctcgagtccgctgagaggcattgaagcgccagtgacgctgtc 412
           |||||||| ||||||||||| || ||| ||||||||||||| |  || || |  || | |
Sbjct: 517 tccatgctgggcctgtgcctggactccactgagaggcattgcaatgcgagcgctgcagcc 458

                                                                       
Query: 413 ttctgggccttggcgagggagtactgcccgcccagacgggggtccagcacgcggaagatg 472
           ||||| ||| | || |||||||||||||| ||||| ||||||||||| | ||| || |||
Sbjct: 457 ttctgcgccctagcaagggagtactgcccacccagccgggggtccaggatgcgaaatatg 398

                                                                       
Query: 473 cgccgcttgctcgtcaggtacggtcgcgcccactccaccaggttgtgctcgccggttggc 532
           ||||| || ||  ||||||| || |  ||||||||||||||||||||||| ||  |||| 
Sbjct: 397 cgccgtttacttctcaggtatggcctagcccactccaccaggttgtgctccccatttggg 338

                        
Query: 533 tggttcttgtcca 545
            ||||||||||||
Sbjct: 337 cggttcttgtcca 325
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>gb|DQ430547.1| Sorghum bicolor voucher NSL51365 locus S0078 genomic sequence
          Length = 579

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 157/193 (81%)
 Strand = Plus / Minus

                                                                       
Query: 353 tccatgctcggcctgtgcctcgagtccgctgagaggcattgaagcgccagtgacgctgtc 412
           |||||||| ||||||||||| || ||| ||||||||||||| |  || || |  || | |
Sbjct: 517 tccatgctgggcctgtgcctggactccactgagaggcattgcaatgcgagcgctgcagcc 458

                                                                       
Query: 413 ttctgggccttggcgagggagtactgcccgcccagacgggggtccagcacgcggaagatg 472
           ||||| ||| | || |||||||||||||| ||||| ||||||||||| | ||| || |||
Sbjct: 457 ttctgcgccctagcaagggagtactgcccacccagccgggggtccaggatgcgaaatatg 398

                                                                       
Query: 473 cgccgcttgctcgtcaggtacggtcgcgcccactccaccaggttgtgctcgccggttggc 532
           ||||| || ||  ||||||| || |  ||||||||||||||||||||||| ||  |||| 
Sbjct: 397 cgccgtttacttctcaggtatggcctagcccactccaccaggttgtgctccccatttggg 338

                        
Query: 533 tggttcttgtcca 545
            ||||||||||||
Sbjct: 337 cggttcttgtcca 325
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>gb|DQ430546.1| Sorghum bicolor voucher NSL51030 locus S0078 genomic sequence
          Length = 579

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 157/193 (81%)
 Strand = Plus / Minus

                                                                       
Query: 353 tccatgctcggcctgtgcctcgagtccgctgagaggcattgaagcgccagtgacgctgtc 412
           |||||||| ||||||||||| || ||| ||||||||||||| |  || || |  || | |
Sbjct: 517 tccatgctgggcctgtgcctggactccactgagaggcattgcaatgcgagcgctgcagcc 458

                                                                       
Query: 413 ttctgggccttggcgagggagtactgcccgcccagacgggggtccagcacgcggaagatg 472
           ||||| ||| | || |||||||||||||| ||||| ||||||||||| | ||| || |||
Sbjct: 457 ttctgcgccctagcaagggagtactgcccacccagccgggggtccaggatgcgaaatatg 398

                                                                       
Query: 473 cgccgcttgctcgtcaggtacggtcgcgcccactccaccaggttgtgctcgccggttggc 532
           ||||| || ||  ||||||| || |  ||||||||||||||||||||||| ||  |||| 
Sbjct: 397 cgccgtttacttctcaggtatggcctagcccactccaccaggttgtgctccccatttggg 338

                        
Query: 533 tggttcttgtcca 545
            ||||||||||||
Sbjct: 337 cggttcttgtcca 325
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>gb|DQ430545.1| Sorghum bicolor voucher NSL50875 locus S0078 genomic sequence
          Length = 579

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 157/193 (81%)
 Strand = Plus / Minus

                                                                       
Query: 353 tccatgctcggcctgtgcctcgagtccgctgagaggcattgaagcgccagtgacgctgtc 412
           |||||||| ||||||||||| || ||| ||||||||||||| |  || || |  || | |
Sbjct: 517 tccatgctgggcctgtgcctggactccactgagaggcattgcaatgcgagcgctgcagcc 458

                                                                       
Query: 413 ttctgggccttggcgagggagtactgcccgcccagacgggggtccagcacgcggaagatg 472
           ||||| ||| | || |||||||||||||| ||||| ||||||||||| | ||| || |||
Sbjct: 457 ttctgcgccctagcaagggagtactgcccacccagccgggggtccaggatgcgaaatatg 398

                                                                       
Query: 473 cgccgcttgctcgtcaggtacggtcgcgcccactccaccaggttgtgctcgccggttggc 532
           ||||| || ||  ||||||| || |  ||||||||||||||||||||||| ||  |||| 
Sbjct: 397 cgccgtttacttctcaggtatggcctagcccactccaccaggttgtgctccccatttggg 338

                        
Query: 533 tggttcttgtcca 545
            ||||||||||||
Sbjct: 337 cggttcttgtcca 325
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>gb|DQ430544.1| Sorghum bicolor voucher BTx623 locus S0078 genomic sequence
          Length = 579

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 157/193 (81%)
 Strand = Plus / Minus

                                                                       
Query: 353 tccatgctcggcctgtgcctcgagtccgctgagaggcattgaagcgccagtgacgctgtc 412
           |||||||| ||||||||||| || ||| ||||||||||||| |  || || |  || | |
Sbjct: 517 tccatgctgggcctgtgcctggactccactgagaggcattgcaatgcgagcgctgcagcc 458

                                                                       
Query: 413 ttctgggccttggcgagggagtactgcccgcccagacgggggtccagcacgcggaagatg 472
           ||||| ||| | || |||||||||||||| ||||| ||||||||||| | ||| || |||
Sbjct: 457 ttctgcgccctagcaagggagtactgcccacccagccgggggtccaggatgcgaaatatg 398

                                                                       
Query: 473 cgccgcttgctcgtcaggtacggtcgcgcccactccaccaggttgtgctcgccggttggc 532
           ||||| || ||  ||||||| || |  ||||||||||||||||||||||| ||  |||| 
Sbjct: 397 cgccgtttacttctcaggtatggcctagcccactccaccaggttgtgctccccatttggg 338

                        
Query: 533 tggttcttgtcca 545
            ||||||||||||
Sbjct: 337 cggttcttgtcca 325
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>ref|NM_189481.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1404

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 101/122 (82%)
 Strand = Plus / Minus

                                                                        
Query: 424  ggcgagggagtactgcccgcccagacgggggtccagcacgcggaagatgcgccgcttgct 483
            |||||| |||||||| ||| | || |||| |||||| | ||||||||| || ||| ||||
Sbjct: 1158 ggcgagcgagtactggccggcgaggcgggcgtccaggatgcggaagatccggcgcctgct 1099

                                                                        
Query: 484  cgtcaggtacggtcgcgcccactccaccaggttgtgctcgccggttggctggttcttgtc 543
              | ||||| || || ||||||||||||||||||||||||||||  ||  ||||||||||
Sbjct: 1098 gctgaggtagggccgagcccactccaccaggttgtgctcgccggcggggcggttcttgtc 1039

              
Query: 544  ca 545
            ||
Sbjct: 1038 ca 1037
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 101/122 (82%)
 Strand = Plus / Plus

                                                                            
Query: 424      ggcgagggagtactgcccgcccagacgggggtccagcacgcggaagatgcgccgcttgct 483
                |||||| |||||||| ||| | || |||| |||||| | ||||||||| || ||| ||||
Sbjct: 42974107 ggcgagcgagtactggccggcgaggcgggcgtccaggatgcggaagatccggcgcctgct 42974166

                                                                            
Query: 484      cgtcaggtacggtcgcgcccactccaccaggttgtgctcgccggttggctggttcttgtc 543
                  | ||||| || || ||||||||||||||||||||||||||||  ||  ||||||||||
Sbjct: 42974167 gctgaggtagggccgagcccactccaccaggttgtgctcgccggcggggcggttcttgtc 42974226

                  
Query: 544      ca 545
                ||
Sbjct: 42974227 ca 42974228
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>dbj|AP003298.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0698H10
          Length = 153449

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 101/122 (82%)
 Strand = Plus / Plus

                                                                         
Query: 424   ggcgagggagtactgcccgcccagacgggggtccagcacgcggaagatgcgccgcttgct 483
             |||||| |||||||| ||| | || |||| |||||| | ||||||||| || ||| ||||
Sbjct: 74986 ggcgagcgagtactggccggcgaggcgggcgtccaggatgcggaagatccggcgcctgct 75045

                                                                         
Query: 484   cgtcaggtacggtcgcgcccactccaccaggttgtgctcgccggttggctggttcttgtc 543
               | ||||| || || ||||||||||||||||||||||||||||  ||  ||||||||||
Sbjct: 75046 gctgaggtagggccgagcccactccaccaggttgtgctcgccggcggggcggttcttgtc 75105

               
Query: 544   ca 545
             ||
Sbjct: 75106 ca 75107
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>dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0518C01
          Length = 173555

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 101/122 (82%)
 Strand = Plus / Plus

                                                                          
Query: 424    ggcgagggagtactgcccgcccagacgggggtccagcacgcggaagatgcgccgcttgct 483
              |||||| |||||||| ||| | || |||| |||||| | ||||||||| || ||| ||||
Sbjct: 167841 ggcgagcgagtactggccggcgaggcgggcgtccaggatgcggaagatccggcgcctgct 167900

                                                                          
Query: 484    cgtcaggtacggtcgcgcccactccaccaggttgtgctcgccggttggctggttcttgtc 543
                | ||||| || || ||||||||||||||||||||||||||||  ||  ||||||||||
Sbjct: 167901 gctgaggtagggccgagcccactccaccaggttgtgctcgccggcggggcggttcttgtc 167960

                
Query: 544    ca 545
              ||
Sbjct: 167961 ca 167962
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>dbj|AK069546.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023F24, full
            insert sequence
          Length = 1841

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 101/122 (82%)
 Strand = Plus / Minus

                                                                        
Query: 424  ggcgagggagtactgcccgcccagacgggggtccagcacgcggaagatgcgccgcttgct 483
            |||||| |||||||| ||| | || |||| |||||| | ||||||||| || ||| ||||
Sbjct: 1329 ggcgagcgagtactggccggcgaggcgggcgtccaggatgcggaagatccggcgcctgct 1270

                                                                        
Query: 484  cgtcaggtacggtcgcgcccactccaccaggttgtgctcgccggttggctggttcttgtc 543
              | ||||| || || ||||||||||||||||||||||||||||  ||  ||||||||||
Sbjct: 1269 gctgaggtagggccgagcccactccaccaggttgtgctcgccggcggggcggttcttgtc 1210

              
Query: 544  ca 545
            ||
Sbjct: 1209 ca 1208
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>ref|XM_470532.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1335

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 485  gtcaggtacggtcgcgcccactccaccaggttgtgctc 522
            ||||||||||| || ||||||||||||||||| |||||
Sbjct: 1013 gtcaggtacggccgggcccactccaccaggttctgctc 976
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                     
Query: 485     gtcaggtacggtcgcgcccactccaccaggttgtgctc 522
               ||||||||||| || ||||||||||||||||| |||||
Sbjct: 4160137 gtcaggtacggccgggcccactccaccaggttctgctc 4160100



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 500     gcccactccaccaggttgtgct 521
               ||||||||||||||||||||||
Sbjct: 9243004 gcccactccaccaggttgtgct 9243025



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 490     gtacggtcgcgcccactccaccag 513
               |||||| |||||||||||||||||
Sbjct: 1755092 gtacggccgcgcccactccaccag 1755069
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                     
Query: 485     gtcaggtacggtcgcgcccactccaccaggttgtgctc 522
               ||||||||||| || ||||||||||||||||| |||||
Sbjct: 4160246 gtcaggtacggccgggcccactccaccaggttctgctc 4160209



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 500     gcccactccaccaggttgtgct 521
               ||||||||||||||||||||||
Sbjct: 9240837 gcccactccaccaggttgtgct 9240858



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 490     gtacggtcgcgcccactccaccag 513
               |||||| |||||||||||||||||
Sbjct: 1755090 gtacggccgcgcccactccaccag 1755067
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>gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0050H14, complete sequence
          Length = 142245

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 485   gtcaggtacggtcgcgcccactccaccaggttgtgctc 522
             ||||||||||| || ||||||||||||||||| |||||
Sbjct: 60774 gtcaggtacggccgggcccactccaccaggttctgctc 60737
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>dbj|AK107046.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-C09, full
            insert sequence
          Length = 1820

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 485  gtcaggtacggtcgcgcccactccaccaggttgtgctc 522
            ||||||||||| || ||||||||||||||||| |||||
Sbjct: 1211 gtcaggtacggccgggcccactccaccaggttctgctc 1174
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>gb|AF044807.1|AF044807 Lampetra planeri homeobox protein LpHox8A gene, partial cds
          Length = 82

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 469 gatgcgccgcttgctcgtcaggtacgg 495
           |||||||||||||| ||||||||||||
Sbjct: 37  gatgcgccgcttgcgcgtcaggtacgg 11
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>dbj|AB125274.1| Lethenteron japonicum mRNA for LjHoxQ8 Homeobox, partial cds
          Length = 228

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 469 gatgcgccgcttgctcgtcaggtacgg 495
           |||||||||||||| ||||||||||||
Sbjct: 135 gatgcgccgcttgcgcgtcaggtacgg 109
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>gb|AF035591.1|PMHOXQ2 Petromyzon marinus homeobox protein HoxQ8 (HoxQ8) gene, exon 2 and
           complete cds
          Length = 307

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 469 gatgcgccgcttgctcgtcaggtacgg 495
           |||||||||||||| ||||||||||||
Sbjct: 103 gatgcgccgcttgcgcgtcaggtacgg 77
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>gb|AF035589.1|AF035589 Petromyzon marinus homeobox protein HoxQ8a (HoxQ8a) gene, partial
           cds
          Length = 180

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 469 gatgcgccgcttgctcgtcaggtacgg 495
           |||||||||||||| ||||||||||||
Sbjct: 96  gatgcgccgcttgcgcgtcaggtacgg 70
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>gb|L14903.1|FSAHOXP60R Petromyzon marinus (clone Pm60-r) homeobox gene, partial cds
          Length = 82

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 469 gatgcgccgcttgctcgtcaggtacgg 495
           |||||||||||||| ||||||||||||
Sbjct: 37  gatgcgccgcttgcgcgtcaggtacgg 11
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>gb|L14901.1|FSAHOXP57Q Petromyzon marinus (clone Pm57-q) homeobox gene, partial cds
          Length = 82

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 469 gatgcgccgcttgctcgtcaggtacgg 495
           |||||||||||||| ||||||||||||
Sbjct: 37  gatgcgccgcttgcgcgtcaggtacgg 11
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>ref|XM_953832.1| Neurospora crassa OR74A hypothetical protein (NCU09346.1) partial
            mRNA
          Length = 6888

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 255  tgctccggctgctgctcggctt 276
            ||||||||||||||||||||||
Sbjct: 1565 tgctccggctgctgctcggctt 1544
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>ref|XM_332037.1| Neurospora crassa OR74A hypothetical protein (NCU09346.1) partial
            mRNA
          Length = 6888

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 255  tgctccggctgctgctcggctt 276
            ||||||||||||||||||||||
Sbjct: 1565 tgctccggctgctgctcggctt 1544
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>gb|AC107315.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0032O19, from chromosome 3, complete sequence
          Length = 142248

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 500   gcccactccaccaggttgtgct 521
             ||||||||||||||||||||||
Sbjct: 43387 gcccactccaccaggttgtgct 43366
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>gb|AC137698.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0014A21, from chromosome 3, complete sequence
          Length = 134014

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 500    gcccactccaccaggttgtgct 521
              ||||||||||||||||||||||
Sbjct: 113249 gcccactccaccaggttgtgct 113228
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>dbj|AK102905.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113F11, full
            insert sequence
          Length = 1608

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 500  gcccactccaccaggttgtgct 521
            ||||||||||||||||||||||
Sbjct: 1117 gcccactccaccaggttgtgct 1096
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 335     agcgccacgacgacctgctcc 355
               |||||||||||||||||||||
Sbjct: 2407708 agcgccacgacgacctgctcc 2407688
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>gb|AC147565.4| Mus musculus BAC clone RP23-116P18 from 9, complete sequence
          Length = 206373

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 320    tcgtggagctgctccagcgcc 340
              |||||||||||||||||||||
Sbjct: 129444 tcgtggagctgctccagcgcc 129464
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>ref|XM_470172.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1173

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 490 gtacggtcgcgcccactccaccag 513
           |||||| |||||||||||||||||
Sbjct: 900 gtacggccgcgcccactccaccag 877
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>gb|AY596292.1| Haloarcula marismortui ATCC 43049 plasmid pNG300, complete sequence
          Length = 39521

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 227   ttggtcgacgacggtctcga 246
             ||||||||||||||||||||
Sbjct: 14021 ttggtcgacgacggtctcga 14002
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>gb|AC136448.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0077O14, complete sequence
          Length = 124915

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    ccacaaaacattcacaaatc 98
             ||||||||||||||||||||
Sbjct: 96499 ccacaaaacattcacaaatc 96480
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>gb|AC123662.13| Mus musculus chromosome 5, clone RP23-213N8, complete sequence
          Length = 223267

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 69    taaatcacagccacaaaacattca 92
             ||||||||||||| ||||||||||
Sbjct: 25860 taaatcacagccagaaaacattca 25837
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>gb|AC102916.5| Mus musculus chromosome 5, clone RP24-274I18, complete sequence
          Length = 144142

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 69    taaatcacagccacaaaacattca 92
             ||||||||||||| ||||||||||
Sbjct: 20723 taaatcacagccagaaaacattca 20746
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>ref|XM_655255.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2743.2), mRNA
          Length = 3162

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 241 tctcgagccggtcatgctcc 260
           ||||||||||||||||||||
Sbjct: 144 tctcgagccggtcatgctcc 163
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 348     cctgctccatgctcggcctgtgcc 371
               ||||| ||||||||||||||||||
Sbjct: 5270970 cctgcaccatgctcggcctgtgcc 5270947
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>gb|AC163027.5| Mus musculus chromosome 5, clone RP23-396H22, complete sequence
          Length = 216377

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 262    gctgctgctcggcttccttt 281
              ||||||||||||||||||||
Sbjct: 139362 gctgctgctcggcttccttt 139343
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>emb|CR769775.11| Human DNA sequence from clone RP11-449H15 on chromosome 9 Contains a
             novel gene, complete sequence
          Length = 169430

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 261   ggctgctgctcggcttcctttgca 284
             ||||||||||| ||||||||||||
Sbjct: 22411 ggctgctgctctgcttcctttgca 22388
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 98      ccgatgcctcgtcgcagatcgcct 121
               ||||| ||||||||||||||||||
Sbjct: 3531805 ccgatccctcgtcgcagatcgcct 3531782
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>emb|AL391987.15| Human DNA sequence from clone RP11-374M1 on chromosome 9 Contains the
             FAM27C gene for family with sequence similarity 27, member
             C, three novel genes, five novel pseudogenes and six CpG
             islands, complete sequence
          Length = 202081

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 261   ggctgctgctcggcttcctttgca 284
             ||||||||||| ||||||||||||
Sbjct: 57191 ggctgctgctctgcttcctttgca 57214
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>emb|AL355151.11| Human DNA sequence from clone RP11-288C24 on chromosome 9, complete
             sequence
          Length = 95128

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 261   ggctgctgctcggcttcctttgca 284
             ||||||||||| ||||||||||||
Sbjct: 85895 ggctgctgctctgcttcctttgca 85918
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>gb|AC098693.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1004C08,
             complete sequence
          Length = 133090

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 490   gtacggtcgcgcccactccaccag 513
             |||||| |||||||||||||||||
Sbjct: 79270 gtacggccgcgcccactccaccag 79293
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>gb|AC093814.3| Homo sapiens BAC clone RP11-362I16 from 4, complete sequence
          Length = 163201

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 145   tacattacacctgaactcaa 164
             ||||||||||||||||||||
Sbjct: 26413 tacattacacctgaactcaa 26432
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 79       ccacaaaacattcacaaatc 98
                ||||||||||||||||||||
Sbjct: 10619333 ccacaaaacattcacaaatc 10619352
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>gb|AC118598.8| Mus musculus chromosome 5, clone RP23-446M13, complete sequence
          Length = 186276

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 262    gctgctgctcggcttccttt 281
              ||||||||||||||||||||
Sbjct: 117078 gctgctgctcggcttccttt 117059
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>dbj|AK109138.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-E06, full
           insert sequence
          Length = 906

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 490 gtacggtcgcgcccactccaccag 513
           |||||| |||||||||||||||||
Sbjct: 499 gtacggccgcgcccactccaccag 476
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>gb|AF127374.1|AF127374 Streptomyces lavendulae LinA homolog, cytochrome P450 hydroxylase ORF4,
             cytochrome P450 hydroxylase ORF3, MitT (mitT), MitS
             (mitS), MitR (mitR), MitQ (mitQ), MitP (mitP), MitO
             (mitO), MitN (mitN), MitM (mitM), MitL (mitL), MitK
             (mitK), MitJ (mitJ), MitI (mitI), MitH (mitH), MitG
             (mitG), MitF (mitF), MitE (mitE), MitD (mitD), MitC
             (mitC), MitB (mitB), MitA (mitA), MmcA (mmcA), MmcB
             (mmcB), MmcC (mmcC), MmcD (mmcD), MmcE (mmcE), MmcF
             (mmcF), MmcG (mmcG), MmcH (mmcH), MmcI (mmcI), MmcJ
             (mmcJ), MmcK (mmcK), MmcL (mmcL), MmcM (mmcM), MmcN
             (mmcN), MmcO (mmcO), Mrd (mrd), MmcP (mmcP), MmcQ (mmcQ),
             MmcR (mmcR), MmcS (mmcS), MmcT (mmcT), MmcU (mmcU), MmcV
             (mmcV), Mct (mct), MmcW (mmcW), MmcX (mmcX), and MmcY
             (mmcY) genes, complete cds; and unknown genes
          Length = 63734

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 329   tgctccagcgccacgacgac 348
             ||||||||||||||||||||
Sbjct: 35440 tgctccagcgccacgacgac 35459
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 79       ccacaaaacattcacaaatc 98
                ||||||||||||||||||||
Sbjct: 10690877 ccacaaaacattcacaaatc 10690896
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>dbj|AP006116.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT40C04, TM0199,
              complete sequence
          Length = 123325

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 500    gcccactccaccaggttgtgctcgccggttgg 531
              ||||||||||| || |||||||||||| ||||
Sbjct: 116016 gcccactccacgagattgtgctcgccgtttgg 115985
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>dbj|AP004901.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT13M13, TM0051b,
             complete sequence
          Length = 54022

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 500   gcccactccaccaggttgtgctcgccggttgg 531
             ||||||||||| || |||||||||||| ||||
Sbjct: 12202 gcccactccacgagattgtgctcgccgtttgg 12233
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>emb|AL627306.15| Human DNA sequence from clone RP11-81A9 on chromosome 9, complete
             sequence
          Length = 51133

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 261   ggctgctgctcggcttcctttgca 284
             ||||||||||| ||||||||||||
Sbjct: 28723 ggctgctgctctgcttcctttgca 28746


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,028,169
Number of Sequences: 3902068
Number of extensions: 4028169
Number of successful extensions: 66091
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65702
Number of HSP's gapped (non-prelim): 389
length of query: 549
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 526
effective length of database: 17,143,297,704
effective search space: 9017374592304
effective search space used: 9017374592304
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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