ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd27m03 |
|---|---|
| Clone Library Name | barley_pub |
>NAK_ARATH (P43293) Probable serine/threonine-protein kinase NAK (EC 2.7.11.1)| Length = 389 Score = 110 bits (274), Expect = 4e-24 Identities = 51/87 (58%), Positives = 66/87 (75%), Gaps = 1/87 (1%) Frame = -2 Query: 556 KNQPTGEHNLVEWARPYLTSKRRIFRVLDPRLGGQYSLAKAQKTASLALQCLSADSRHRP 377 KNQP GEHNLV+WARPYLT+KRR+ RV+DPRL GQYSL +A K A LAL C+S D++ RP Sbjct: 282 KNQPVGEHNLVDWARPYLTNKRRLLRVMDPRLQGQYSLTRALKIAVLALDCISIDAKSRP 341 Query: 376 SMEQVVVALEQLHDAKEGG-NSPHPQL 299 +M ++V +E+LH KE +PQ+ Sbjct: 342 TMNEIVKTMEELHIQKEASKEQQNPQI 368
>APK1A_ARATH (Q06548) Protein kinase APK1A, chloroplast precursor (EC 2.7.11.1)| Length = 410 Score = 90.1 bits (222), Expect = 4e-18 Identities = 44/82 (53%), Positives = 62/82 (75%), Gaps = 2/82 (2%) Frame = -2 Query: 556 KNQPTGEHNLVEWARPYLTSKRRIFRVLDPRLGGQYSLAKAQKTASLALQCLSADSRHRP 377 KN+P+GE NLVEWA+PYL +KR+IFRV+D RL QYS+ +A K A+L+L+CL+ + + RP Sbjct: 282 KNRPSGERNLVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRP 341 Query: 376 SMEQVVVALEQLH--DAKEGGN 317 +M +VV LE + +A GGN Sbjct: 342 NMSEVVSHLEHIQSLNAAIGGN 363
>APK1B_ARATH (P46573) Protein kinase APK1B, chloroplast precursor (EC 2.7.11.1)| Length = 412 Score = 88.2 bits (217), Expect = 1e-17 Identities = 43/89 (48%), Positives = 60/89 (67%) Frame = -2 Query: 556 KNQPTGEHNLVEWARPYLTSKRRIFRVLDPRLGGQYSLAKAQKTASLALQCLSADSRHRP 377 KN+P GE LVEWARP L +KR++FRV+D RL QYS+ +A K A+LAL+CL+ + + RP Sbjct: 283 KNRPPGEQKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRP 342 Query: 376 SMEQVVVALEQLHDAKEGGNSPHPQLQRK 290 +M +VV LE + E G +QR+ Sbjct: 343 NMNEVVSHLEHIQTLNEAGGRNIDMVQRR 371
>CX32_ARATH (P27450) Probable serine/threonine-protein kinase Cx32, chloroplast| precursor (EC 2.7.11.1) Length = 419 Score = 63.2 bits (152), Expect = 5e-10 Identities = 26/70 (37%), Positives = 46/70 (65%) Frame = -2 Query: 550 QPTGEHNLVEWARPYLTSKRRIFRVLDPRLGGQYSLAKAQKTASLALQCLSADSRHRPSM 371 +P G+ +LV+W RP L++K R+ +++D + GQY+ A + A + L C+ D ++RP M Sbjct: 299 RPRGQESLVDWLRPELSNKHRVKQIMDKGIKGQYTTKVATEMARITLSCIEPDPKNRPHM 358 Query: 370 EQVVVALEQL 341 ++VV LE + Sbjct: 359 KEVVEVLEHI 368
>PBS1_ARATH (Q9FE20) Serine/threonine-protein kinase PBS1 (EC 2.7.11.1)| (AvrPphB susceptible protein 1) Length = 456 Score = 55.1 bits (131), Expect = 1e-07 Identities = 25/69 (36%), Positives = 37/69 (53%) Frame = -2 Query: 547 PTGEHNLVEWARPYLTSKRRIFRVLDPRLGGQYSLAKAQKTASLALQCLSADSRHRPSME 368 P GE NLV WARP +R+ ++ DPRL G++ + ++A C+ + RP + Sbjct: 295 PHGEQNLVAWARPLFNDRRKFIKLADPRLKGRFPTRALYQALAVASMCIQEQAATRPLIA 354 Query: 367 QVVVALEQL 341 VV AL L Sbjct: 355 DVVTALSYL 363
>RLCK7_ARATH (Q9LQQ8) Probable serine/threonine-protein kinase RLCKVII (EC| 2.7.11.1) Length = 423 Score = 52.8 bits (125), Expect = 7e-07 Identities = 26/76 (34%), Positives = 40/76 (52%) Frame = -2 Query: 538 EHNLVEWARPYLTSKRRIFRVLDPRLGGQYSLAKAQKTASLALQCLSADSRHRPSMEQVV 359 + NLV WARP +R +++DP L GQY + + +++ C+ RP + VV Sbjct: 315 DQNLVGWARPLFKDRRNFPKMVDPLLQGQYPVRGLYQALAISAMCVQEQPTMRPVVSDVV 374 Query: 358 VALEQLHDAKEGGNSP 311 +AL L +K NSP Sbjct: 375 LALNFLASSKYDPNSP 390
>NORK_PEA (Q8LKZ1) Nodulation receptor kinase precursor (EC 2.7.11.1)| Length = 924 Score = 50.4 bits (119), Expect = 3e-06 Identities = 25/68 (36%), Positives = 39/68 (57%) Frame = -2 Query: 550 QPTGEHNLVEWARPYLTSKRRIFRVLDPRLGGQYSLAKAQKTASLALQCLSADSRHRPSM 371 +P E +LVEWA+PY+ + + + ++DP + G Y + +ALQCL S +RP M Sbjct: 802 RPRVEWSLVEWAKPYIRASK-VDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCM 860 Query: 370 EQVVVALE 347 +V LE Sbjct: 861 VDIVRELE 868
>NORK_MEDTR (Q8L4H4) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not| make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) Length = 925 Score = 50.1 bits (118), Expect = 4e-06 Identities = 25/68 (36%), Positives = 39/68 (57%) Frame = -2 Query: 550 QPTGEHNLVEWARPYLTSKRRIFRVLDPRLGGQYSLAKAQKTASLALQCLSADSRHRPSM 371 +P E +LVEWA+PY+ + + + ++DP + G Y + +ALQCL S +RP M Sbjct: 803 RPRIEWSLVEWAKPYIRASK-VDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCM 861 Query: 370 EQVVVALE 347 +V LE Sbjct: 862 VDIVRELE 869
>CRI4_MAIZE (O24585) Putative receptor protein kinase CRINKLY4 precursor (EC| 2.7.11.1) Length = 901 Score = 49.7 bits (117), Expect = 6e-06 Identities = 28/64 (43%), Positives = 37/64 (57%) Frame = -2 Query: 538 EHNLVEWARPYLTSKRRIFRVLDPRLGGQYSLAKAQKTASLALQCLSADSRHRPSMEQVV 359 E N+VEWA P L IF +LDP L L +K AS+A +C+ + RPSM++V Sbjct: 717 EGNIVEWAVP-LIKAGDIFAILDPVLSPPSDLEALKKIASVACKCVRMRGKDRPSMDKVT 775 Query: 358 VALE 347 ALE Sbjct: 776 TALE 779
>SIRK_ARATH (O64483) Senescence-induced receptor-like serine/threonine-protein| kinase precursor (FLG22-induced receptor-like kinase 1) Length = 876 Score = 39.3 bits (90), Expect = 0.008 Identities = 18/46 (39%), Positives = 28/46 (60%) Frame = -2 Query: 478 VLDPRLGGQYSLAKAQKTASLALQCLSADSRHRPSMEQVVVALEQL 341 ++D RL +Y + A K + +AL C S RP+M QVV+ L+Q+ Sbjct: 800 IVDQRLRERYDVGSAWKMSEIALACTEHTSAQRPTMSQVVMELKQI 845
>RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2.7.11.1)| Length = 1109 Score = 35.0 bits (79), Expect = 0.14 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 4/68 (5%) Frame = -2 Query: 541 GEHNLVEWARPYLTSKRRIFRVLDPRLGGQY----SLAKAQKTASLALQCLSADSRHRPS 374 GE ++V W R T I +++DP L + + + + SLAL+C + RP+ Sbjct: 1025 GETDIVGWVRSVWTQTGEIQKIVDPSLLDELIDSSVMEQVTEALSLALRCAEKEVDKRPT 1084 Query: 373 MEQVVVAL 350 M VV L Sbjct: 1085 MRDVVKQL 1092
>PSKR_DAUCA (Q8LPB4) Phytosulfokine receptor precursor (EC 2.7.11.1)| (Phytosulfokine LRR receptor kinase) Length = 1021 Score = 33.9 bits (76), Expect = 0.32 Identities = 18/70 (25%), Positives = 33/70 (47%) Frame = -2 Query: 550 QPTGEHNLVEWARPYLTSKRRIFRVLDPRLGGQYSLAKAQKTASLALQCLSADSRHRPSM 371 +P G +L+ W T KR + DP + + + +A +CL + + RP+ Sbjct: 949 KPRGSRDLISWVLQMKTEKRES-EIFDPFIYDKDHAEEMLLVLEIACRCLGENPKTRPTT 1007 Query: 370 EQVVVALEQL 341 +Q+V LE + Sbjct: 1008 QQLVSWLENI 1017
>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1| precursor (EC 2.7.11.1) (BRI1-associated receptor kinase 1) (Somatic embryogenesis receptor-like kinase 3) Length = 615 Score = 33.5 bits (75), Expect = 0.42 Identities = 18/61 (29%), Positives = 31/61 (50%) Frame = -2 Query: 529 LVEWARPYLTSKRRIFRVLDPRLGGQYSLAKAQKTASLALQCLSADSRHRPSMEQVVVAL 350 L++W + L K+ + ++D L G Y + ++ +AL C + RP M +VV L Sbjct: 505 LLDWVKGLLKEKK-LEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 563 Query: 349 E 347 E Sbjct: 564 E 564
>BRL3_ARATH (Q9LJF3) Serine/threonine-protein kinase BRI1-like 3 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 3) Length = 1164 Score = 32.7 bits (73), Expect = 0.72 Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 4/70 (5%) Frame = -2 Query: 538 EHNLVEWARPYLTSKRRIFRVLDPRL----GGQYSLAKAQKTASLALQCLSADSRHRPSM 371 ++NLV WA+ KR +LDP L G L K AS QCL RP+M Sbjct: 1070 DNNLVGWAKQLYREKRGA-EILDPELVTDKSGDVELLHYLKIAS---QCLDDRPFKRPTM 1125 Query: 370 EQVVVALEQL 341 QV+ ++L Sbjct: 1126 IQVMTMFKEL 1135
>RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC 2.7.11.1)| Length = 999 Score = 32.7 bits (73), Expect = 0.72 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 4/77 (5%) Frame = -2 Query: 550 QPT----GEHNLVEWARPYLTSKRRIFRVLDPRLGGQYSLAKAQKTASLALQCLSADSRH 383 QPT G+ ++ +W L K + V+DP+L ++ + K + L C S + Sbjct: 896 QPTDSELGDKDMAKWVCTAL-DKCGLEPVIDPKLDLKFK-EEISKVIHIGLLCTSPLPLN 953 Query: 382 RPSMEQVVVALEQLHDA 332 RPSM +VV+ L+++ A Sbjct: 954 RPSMRKVVIMLQEVSGA 970
>BRI1_ARATH (O22476) BRASSINOSTEROID INSENSITIVE 1 precursor (EC 2.7.11.1)| (AtBRI1) (Brassinosteroid LRR receptor kinase) Length = 1196 Score = 32.3 bits (72), Expect = 0.94 Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%) Frame = -2 Query: 541 GEHNLVEWARPYLTSKRRIFRVLDPRLGGQYSLAKAQKTASL--ALQCLSADSRHRPSME 368 G++NLV W + + +K RI V DP L + + + L A+ CL + RP+M Sbjct: 1092 GDNNLVGWVKQH--AKLRISDVFDPELMKEDPALEIELLQHLKVAVACLDDRAWRRPTMV 1149 Query: 367 QVVVALEQL 341 QV+ +++ Sbjct: 1150 QVMAMFKEI 1158
>KBTBB_HUMAN (O94819) Kelch repeat and BTB domain-containing protein 11 (Kelch| domain-containing protein 7B) Length = 623 Score = 31.2 bits (69), Expect = 2.1 Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 8/46 (17%) Frame = +1 Query: 427 SSGPWRGSTARPDGGPARGRCAAC-------SSGTVAPT-PPGCAR 540 ++G WR T P+G PARG C C +G VAP P G AR Sbjct: 333 AAGEWRELTRLPEGAPARG-CGLCVLYNYLFVAGGVAPAGPDGRAR 377
>KPRO_MAIZE (P17801) Putative receptor protein kinase ZmPK1 precursor (EC| 2.7.11.1) Length = 817 Score = 30.8 bits (68), Expect = 2.7 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = -2 Query: 475 LDPRLGGQYSLAKAQKTASLALQCLSADSRHRPSMEQVVVALEQLHD 335 LD +L + +A+ LA+ CL D RP+ME V L D Sbjct: 771 LDSKLNRPVNYVQARTLIKLAVSCLEEDRSKRPTMEHAVQTLLSADD 817
>KBTBB_MOUSE (Q8BNW9) Kelch repeat and BTB domain-containing protein 11| Length = 633 Score = 30.8 bits (68), Expect = 2.7 Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 8/45 (17%) Frame = +1 Query: 430 SGPWRGSTARPDGGPARGRCAAC-------SSGTVAPT-PPGCAR 540 +G WR T P+G PARG C C +G VAP P G AR Sbjct: 340 AGEWRELTRLPEGAPARG-CGLCVLFNYLFVAGGVAPAGPDGRAR 383
>PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (EC 2.7.11.1)| (Phytosulfokine LRR receptor kinase) Length = 1008 Score = 30.8 bits (68), Expect = 2.7 Identities = 17/70 (24%), Positives = 35/70 (50%) Frame = -2 Query: 550 QPTGEHNLVEWARPYLTSKRRIFRVLDPRLGGQYSLAKAQKTASLALQCLSADSRHRPSM 371 +P G +L+ W + + R V DP + + + + + +A CLS + + RP+ Sbjct: 940 KPKGCRDLISWVVK-MKHESRASEVFDPLIYSKENDKEMFRVLEIACLCLSENPKQRPTT 998 Query: 370 EQVVVALEQL 341 +Q+V L+ + Sbjct: 999 QQLVSWLDDV 1008
>CEZ2_HUMAN (Q8TE49) Zinc finger A20 domain-containing protein ? (EC 3.-.-.-)| (Zinc finger protein Cezanne 2) (OTU domain-containing protein 7) Length = 926 Score = 30.4 bits (67), Expect = 3.6 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 4/55 (7%) Frame = +1 Query: 403 GIEAPVTLSSGPWRGSTA----RPDGGPARGRCAACSSGTVAPTPPGCARRLAGS 555 G+ P S GP RP GPA GR A ++G A +P G ARR + S Sbjct: 702 GVPVPERASPGPPTQLVLKLKERPSPGPAAGRAARAAAGGTA-SPGGGARRASAS 755
>PTPA1_GIBZE (Q4I0M9) Serine/threonine-protein phosphatase 2A activator 1 (EC| 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase PTPA-1) (PPIase PTPA-1) (Rotamase PTPA-1) (Phosphotyrosyl phosphatase activator 1) Length = 445 Score = 30.0 bits (66), Expect = 4.6 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = -1 Query: 554 EPANRRAQPGGVGATVPDEQAAHLPRAGPPSGRAVLPRQGP 432 +PA P G G + P QA +P +GP + +P GP Sbjct: 372 QPAMAAPTPSGPGTSAPWAQATRMPPSGPGIPYSRMPPPGP 412
>SC5A5_MOUSE (Q99PN0) Sodium/iodide cotransporter (Na(+)/I(-) cotransporter)| (Sodium-iodide symporter) (Na(+)/I(-)-symporter) Length = 618 Score = 30.0 bits (66), Expect = 4.6 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Frame = +1 Query: 397 LRGIEAPVTLSSGPWRGSTARPDGGPARG----RCAACSSGTVAPTPPGCARRLAG 552 L G+ A + +S G+T P G G A C++ +V P+PPG A G Sbjct: 446 LSGLTAGLAVSLWVAVGATLYPPGEQTMGVLPTSAAGCTNASVLPSPPGAANTSRG 501
>MINK1_HUMAN (Q8N4C8) Misshapen-like kinase 1 (EC 2.7.11.1) (Mitogen-activated| protein kinase kinase kinase kinase 6) (MAPK/ERK kinase kinase kinase 6) (MEK kinase kinase 6) (MEKKK 6) (Misshapen/NIK-related kinase) (GCK family kinase MiNK) Length = 1332 Score = 30.0 bits (66), Expect = 4.6 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 4/51 (7%) Frame = -1 Query: 539 RAQPGGVGATVPDEQAAHLPRAG----PPSGRAVLPRQGPEDSVTGASMPL 399 +++PG G P QA+ P PP R V P++GP S+ +PL Sbjct: 539 KSKPGSTGPEPPIPQASPGPPGPLSQTPPMQRPVEPQEGPHKSLVAHRVPL 589
>GPR62_HUMAN (Q9BZJ7) Probable G-protein coupled receptor 62 (hGPCR8)| Length = 368 Score = 29.6 bits (65), Expect = 6.1 Identities = 22/47 (46%), Positives = 25/47 (53%), Gaps = 6/47 (12%) Frame = -1 Query: 545 NRRAQPGGVGATVPDEQAAHLPRA------GPPSGRAVLPRQGPEDS 423 +RRA PG V A P QA H PRA PP G AV P + PE + Sbjct: 305 SRRALPGPVRACTP--QAWH-PRALLQCLQRPPEGPAVGPSEAPEQT 348
>SDK1_HUMAN (Q7Z5N4) Protein sidekick-1 precursor| Length = 2213 Score = 29.3 bits (64), Expect = 7.9 Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%) Frame = -1 Query: 548 ANRRAQPGGVGATVPDEQAAHLPRAGPPSGRA---VLPRQGPEDS 423 A A GG G P E+A G P GRA + PR GPE S Sbjct: 5 ARPSAAGGGGGGAEPPERAGPGRPRGSPPGRARPSLAPRPGPEPS 49
>NRX2A_HUMAN (Q9P2S2) Neurexin-2-alpha precursor (Neurexin II-alpha)| Length = 1712 Score = 29.3 bits (64), Expect = 7.9 Identities = 20/45 (44%), Positives = 21/45 (46%), Gaps = 1/45 (2%) Frame = +1 Query: 403 GIEAPVTLSSGPWRGSTARPDGGPARGRCAACSSGTV-APTPPGC 534 G P L S RG+TA P PAR CA TV AP GC Sbjct: 185 GERPPALLGSQGLRGATADPLCAPARNPCANGGLCTVLAPGEVGC 229
>MLTK_MOUSE (Q9ESL4) Mitogen-activated protein kinase kinase kinase MLT (EC| 2.7.11.25) (MLK-like mitogen-activated protein triple kinase) (Leucine zipper-and sterile alpha motif kinase ZAK) (Sterile alpha motif- and leucine zipper-containing kinase AZK) ( Length = 802 Score = 29.3 bits (64), Expect = 7.9 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = -2 Query: 424 ASLALQCLSADSRHRPSMEQVVVALEQL 341 A L QC AD++ RPS +Q++ LE + Sbjct: 236 AELLHQCWEADAKKRPSFKQIISILESM 263
>KR14_ICHV1 (P15443) Gene 14 protein kinase (EC 2.7.11.1)| Length = 391 Score = 29.3 bits (64), Expect = 7.9 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -2 Query: 460 GGQYSLAKAQKTASLALQCLSADSRHRPSMEQVV 359 GG +LA+ + L +CL D RPS+E +V Sbjct: 352 GGARTLARVDELIGLVARCLERDPAMRPSLETLV 385
>MLTK_HUMAN (Q9NYL2) Mitogen-activated protein kinase kinase kinase MLT (EC| 2.7.11.25) (MLK-like mitogen-activated protein triple kinase) (Leucine zipper-and sterile alpha motif-containing kinase) (Sterile alpha motif- and leucine zipper-containing kinase Length = 800 Score = 29.3 bits (64), Expect = 7.9 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = -2 Query: 424 ASLALQCLSADSRHRPSMEQVVVALEQL 341 A L QC AD++ RPS +Q++ LE + Sbjct: 236 AELLHQCWEADAKKRPSFKQIISILESM 263 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,319,358 Number of Sequences: 219361 Number of extensions: 1341704 Number of successful extensions: 5064 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 4762 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5053 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4585734400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
