ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd27l20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY105941.1| Zea mays PCO135078 mRNA sequence 246 8e-62
2gb|AY730048.1| Zea mays spermidine synthase (spesyn) mRNA, compl... 246 8e-62
3dbj|AB098063.1| Oryza sativa (japonica cultivar-group) OsSPDS2 m... 228 2e-56
4dbj|AK068518.1| Oryza sativa (japonica cultivar-group) cDNA clon... 228 2e-56
5dbj|AK067301.1| Oryza sativa (japonica cultivar-group) cDNA clon... 228 2e-56
6emb|AJ251302.1|OSA251302 Oryza sativa partial mRNA for putative ... 220 4e-54
7gb|AY110392.1| Zea mays CL7038_2 mRNA sequence 96 2e-16
8dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 94 7e-16
9dbj|AP004745.2| Oryza sativa (japonica cultivar-group) genomic D... 94 7e-16
10dbj|AK065153.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 7e-13
11gb|AY110118.1| Zea mays CL7038_1 mRNA sequence 74 6e-10
12emb|AM158913.1| Plantago major partial mRNA for spermidine synth... 62 2e-06
13emb|CT573028.11| M.truncatula DNA sequence from clone MTH2-51N20... 50 0.009
14gb|AY335900.1| Lycopersicon esculentum putative spermine synthas... 46 0.15
15dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.57
16dbj|AP004875.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.57
17dbj|AP006844.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.57
18emb|BX546477.9| Zebrafish DNA sequence from clone DKEYP-79C5 in ... 42 2.3
19emb|BX322234.7| Human DNA sequence from clone XXyac-65C7_A on ch... 42 2.3
20emb|CR937028.1| Zebrafish DNA sequence from clone DKEYP-79C5 in ... 42 2.3
21emb|BX323576.9| Zebrafish DNA sequence from clone DKEYP-77A12 in... 42 2.3
22dbj|AK158474.1| Mus musculus adult inner ear cDNA, RIKEN full-le... 42 2.3
23emb|BX571674.7| Zebrafish DNA sequence from clone DKEY-193C22 in... 42 2.3
24emb|BX005327.9| Zebrafish DNA sequence from clone DKEY-65B16 in ... 42 2.3
25gb|AC144753.3| Ornithorhynchus anatinus clone OA_Bb-228F7, compl... 42 2.3
26emb|BX247878.5| Zebrafish DNA sequence from clone CH211-266O5 in... 42 2.3
27dbj|AB072917.2| Malus x domestica MdSPDS2b mRNA forspermidine sy... 42 2.3
28dbj|AB072916.2| Malus x domestica MdSPDS2a mRNA forspermidine sy... 42 2.3
29dbj|AB072915.2| Malus x domestica MdSPDS1 mRNA forspermidine syn... 42 2.3
30gb|AC139562.8| Mus musculus chromosome 5, clone RP24-180G11, com... 40 9.0
31ref|XM_654820.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 9.0
32gb|BT014416.1| Lycopersicon esculentum clone 133724F, mRNA sequence 40 9.0
33gb|AC025724.3| Caenorhabditis elegans cosmid Y67D8C, complete se... 40 9.0
34gb|AC125327.4| Mus musculus BAC clone RP23-346B17 from chromosom... 40 9.0
35gb|AC121962.3| Mus musculus chromosome UNK clone RP24-255I5, com... 40 9.0
36gb|AC096917.3| Homo sapiens chromosome 3 clone RP11-94D19, compl... 40 9.0
37emb|Z94057.1|HS518E13 Human DNA sequence from clone RP3-518E13 o... 40 9.0
38emb|AL096867.15|HSJ365O19 Human DNA sequence from clone RP3-365O... 40 9.0
39emb|AL669816.3| Mouse DNA sequence from clone RP23-266C4 on chro... 40 9.0
40gb|AC153818.5| Mus musculus 6 BAC RP23-345F4 (Roswell Park Cance... 40 9.0
41gb|AC149149.3| Xenopus tropicalis clone ISB-175F5, complete sequ... 40 9.0
42emb|BX005328.9| Zebrafish DNA sequence from clone DKEY-63D15 in ... 40 9.0
43gb|AC138071.2| Homo sapiens chromosome 3 clone RP11-504G20, comp... 40 9.0
44dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 9.0
45gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 9.0
46gb|AC162461.6| Mus musculus chromosome 5, clone RP23-265I19, com... 40 9.0 
>gb|AY105941.1| Zea mays PCO135078 mRNA sequence
          Length = 1019

 Score =  246 bits (124), Expect = 8e-62
 Identities = 253/297 (85%)
 Strand = Plus / Minus

                                                                       
Query: 353 agtgttatatgcctccagctccctctttacaaatgttggcagaataaaagcagccctatg 412
           |||| ||||||| ||||| || ||  |||||||||||||||||| |||||||||||||||
Sbjct: 620 agtggtatatgcttccagttctcttcttacaaatgttggcagaacaaaagcagccctatg 561

                                                                       
Query: 413 aatctctgaattgtaaaatctcatctctcgtccatctttagtagctccttcaatcttctc 472
            ||||| |||||||||||||| |  || | |||| |||| |  |||||||| || |||||
Sbjct: 560 gatctcggaattgtaaaatctgagttcccttccagcttttgctgctccttctattttctc 501

                                                                       
Query: 473 gattggattcacaggagtcaagaagtccaccggtggaccttccttcgcgcatagcaaaaa 532
            ||||||||| ||||||||||||||| ||| |   ||||||| || || |||||||||||
Sbjct: 500 aattggattcgcaggagtcaagaagttcactgcacgaccttcttttgcacatagcaaaaa 441

                                                                       
Query: 533 tccgatgacaccactaggatatgttggaacacttgcccaggcatagtgcacgccgccctt 592
           ||| ||||||||||| ||||||||||||||||||| |||||||||||||||  | || ||
Sbjct: 440 tccaatgacaccactgggatatgttggaacacttgtccaggcatagtgcacagcaccttt 381

                                                                    
Query: 593 gaatacctnccgacagatagaaagcatatnctgnattagatgtgtgtgcagccacat 649
           ||||  ||  |||||||||| |||||||| ||| |||||||||||||||||||||||
Sbjct: 380 gaatgtctgtcgacagatagcaagcatatcctggattagatgtgtgtgcagccacat 324
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>gb|AY730048.1| Zea mays spermidine synthase (spesyn) mRNA, complete cds
          Length = 1571

 Score =  246 bits (124), Expect = 8e-62
 Identities = 253/297 (85%)
 Strand = Plus / Minus

                                                                        
Query: 353  agtgttatatgcctccagctccctctttacaaatgttggcagaataaaagcagccctatg 412
            |||| ||||||| ||||| || ||  |||||||||||||||||| |||||||||||||||
Sbjct: 1148 agtggtatatgcttccagttctcttcttacaaatgttggcagaacaaaagcagccctatg 1089

                                                                        
Query: 413  aatctctgaattgtaaaatctcatctctcgtccatctttagtagctccttcaatcttctc 472
             ||||| |||||||||||||| |  || | |||| |||| |  |||||||| || |||||
Sbjct: 1088 gatctcggaattgtaaaatctgagttcccttccagcttttgctgctccttctattttctc 1029

                                                                        
Query: 473  gattggattcacaggagtcaagaagtccaccggtggaccttccttcgcgcatagcaaaaa 532
             ||||||||| ||||||||||||||| ||| |   ||||||| || || |||||||||||
Sbjct: 1028 aattggattcgcaggagtcaagaagttcactgcacgaccttcttttgcacatagcaaaaa 969

                                                                        
Query: 533  tccgatgacaccactaggatatgttggaacacttgcccaggcatagtgcacgccgccctt 592
            ||| ||||||||||| ||||||||||||||||||| |||||||||||||||  | || ||
Sbjct: 968  tccaatgacaccactgggatatgttggaacacttgtccaggcatagtgcacagcaccttt 909

                                                                     
Query: 593  gaatacctnccgacagatagaaagcatatnctgnattagatgtgtgtgcagccacat 649
            ||||  ||  |||||||||| |||||||| ||| |||||||||||||||||||||||
Sbjct: 908  gaatgtctgtcgacagatagcaagcatatcctggattagatgtgtgtgcagccacat 852
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>dbj|AB098063.1| Oryza sativa (japonica cultivar-group) OsSPDS2 mRNA for aminopropyl
            transferase, complete cds
          Length = 1560

 Score =  228 bits (115), Expect = 2e-56
 Identities = 247/292 (84%)
 Strand = Plus / Minus

                                                                        
Query: 366  tccagctccctctttacaaatgttggcagaataaaagcagccctatgaatctctgaattg 425
            ||||| || ||| |||||||||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 1175 tccagttctctccttacaaatgttggcagaacaaaagcagcccgatgaacctctgaattg 1116

                                                                        
Query: 426  taaaatctcatctctcgtccatctttagtagctccttcaatcttctcgattggattcaca 485
            |||||||| || || | |||| |||   |||||||||| |  ||||| ||||||||||||
Sbjct: 1115 taaaatctgatttcccttccagcttccatagctccttccagtttctcaattggattcaca 1056

                                                                        
Query: 486  ggagtcaagaagtccaccggtggaccttccttcgcgcatagcaaaaatccgatgacacca 545
            ||||  | ||||| ||| | ||||||||| ||||| ||||||||||| || |||||||||
Sbjct: 1055 ggagaaaggaagttcactgctggaccttctttcgcacatagcaaaaaaccaatgacacca 996

                                                                        
Query: 546  ctaggatatgttggaacacttgcccaggcatagtgcacgccgcccttgaatacctnccga 605
            |||||||| || ||||| |||| ||||||||| |||||  | |||||||||   |  |||
Sbjct: 995  ctaggataggtaggaacgcttgtccaggcataatgcacagctcccttgaatgtttcacga 936

                                                                
Query: 606  cagatagaaagcatatnctgnattagatgtgtgtgcagccacatactttcag 657
            ||||||||||||||||  || |||||||||||||||||||||||||| ||||
Sbjct: 935  cagatagaaagcatatcttgaattagatgtgtgtgcagccacatactctcag 884
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>dbj|AK068518.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155G09, full
            insert sequence
          Length = 1614

 Score =  228 bits (115), Expect = 2e-56
 Identities = 247/292 (84%)
 Strand = Plus / Minus

                                                                        
Query: 366  tccagctccctctttacaaatgttggcagaataaaagcagccctatgaatctctgaattg 425
            ||||| || ||| |||||||||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 1197 tccagttctctccttacaaatgttggcagaacaaaagcagcccgatgaacctctgaattg 1138

                                                                        
Query: 426  taaaatctcatctctcgtccatctttagtagctccttcaatcttctcgattggattcaca 485
            |||||||| || || | |||| |||   |||||||||| |  ||||| ||||||||||||
Sbjct: 1137 taaaatctgatttcccttccagcttccatagctccttccagtttctcaattggattcaca 1078

                                                                        
Query: 486  ggagtcaagaagtccaccggtggaccttccttcgcgcatagcaaaaatccgatgacacca 545
            ||||  | ||||| ||| | ||||||||| ||||| ||||||||||| || |||||||||
Sbjct: 1077 ggagaaaggaagttcactgctggaccttctttcgcacatagcaaaaaaccaatgacacca 1018

                                                                        
Query: 546  ctaggatatgttggaacacttgcccaggcatagtgcacgccgcccttgaatacctnccga 605
            |||||||| || ||||| |||| ||||||||| |||||  | |||||||||   |  |||
Sbjct: 1017 ctaggataggtaggaacgcttgtccaggcataatgcacagctcccttgaatgtttcacga 958

                                                                
Query: 606  cagatagaaagcatatnctgnattagatgtgtgtgcagccacatactttcag 657
            ||||||||||||||||  || |||||||||||||||||||||||||| ||||
Sbjct: 957  cagatagaaagcatatcttgaattagatgtgtgtgcagccacatactctcag 906
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>dbj|AK067301.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013105J05, full
            insert sequence
          Length = 1593

 Score =  228 bits (115), Expect = 2e-56
 Identities = 247/292 (84%)
 Strand = Plus / Minus

                                                                        
Query: 366  tccagctccctctttacaaatgttggcagaataaaagcagccctatgaatctctgaattg 425
            ||||| || ||| |||||||||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 1199 tccagttctctccttacaaatgttggcagaacaaaagcagcccgatgaacctctgaattg 1140

                                                                        
Query: 426  taaaatctcatctctcgtccatctttagtagctccttcaatcttctcgattggattcaca 485
            |||||||| || || | |||| |||   |||||||||| |  ||||| ||||||||||||
Sbjct: 1139 taaaatctgatttcccttccagcttccatagctccttccagtttctcaattggattcaca 1080

                                                                        
Query: 486  ggagtcaagaagtccaccggtggaccttccttcgcgcatagcaaaaatccgatgacacca 545
            ||||  | ||||| ||| | ||||||||| ||||| ||||||||||| || |||||||||
Sbjct: 1079 ggagaaaggaagttcactgctggaccttctttcgcacatagcaaaaaaccaatgacacca 1020

                                                                        
Query: 546  ctaggatatgttggaacacttgcccaggcatagtgcacgccgcccttgaatacctnccga 605
            |||||||| || ||||| |||| ||||||||| |||||  | |||||||||   |  |||
Sbjct: 1019 ctaggataggtaggaacgcttgtccaggcataatgcacagctcccttgaatgtttcacga 960

                                                                
Query: 606  cagatagaaagcatatnctgnattagatgtgtgtgcagccacatactttcag 657
            ||||||||||||||||  || |||||||||||||||||||||||||| ||||
Sbjct: 959  cagatagaaagcatatcttgaattagatgtgtgtgcagccacatactctcag 908
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>emb|AJ251302.1|OSA251302 Oryza sativa partial mRNA for putative aminopropyltransferase
           (spdSyn gene)
          Length = 883

 Score =  220 bits (111), Expect = 4e-54
 Identities = 246/292 (84%)
 Strand = Plus / Minus

                                                                       
Query: 366 tccagctccctctttacaaatgttggcagaataaaagcagccctatgaatctctgaattg 425
           ||||| || ||| |||||||||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 490 tccagttctctccttacaaatgttggcagaacaaaagcagcccgatgaacctctgaattg 431

                                                                       
Query: 426 taaaatctcatctctcgtccatctttagtagctccttcaatcttctcgattggattcaca 485
           |||||||| || || | |||| |||   |||||||||| |  ||||| ||||||||||||
Sbjct: 430 taaaatctgatttcccttccagcttccatagctccttccagtttctcaattggattcaca 371

                                                                       
Query: 486 ggagtcaagaagtccaccggtggaccttccttcgcgcatagcaaaaatccgatgacacca 545
           ||||  | ||||| ||| | ||||||||| ||||| ||||||||||| || |||||||||
Sbjct: 370 ggagaaaggaagttcactgctggaccttctttcgcacatagcaaaaaaccaatgacacca 311

                                                                       
Query: 546 ctaggatatgttggaacacttgcccaggcatagtgcacgccgcccttgaatacctnccga 605
           |||||||| || ||||| |||| ||||||||| |||||  | |||||||||   |  |||
Sbjct: 310 ctaggataggtaggaacgcttgtccaggcataatgcacagctcccttgaatgtttcacga 251

                                                               
Query: 606 cagatagaaagcatatnctgnattagatgtgtgtgcagccacatactttcag 657
           |||||||| |||||||  || |||||||||||||||||||||||||| ||||
Sbjct: 250 cagatagagagcatatcttgaattagatgtgtgtgcagccacatactctcag 199
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>gb|AY110392.1| Zea mays CL7038_2 mRNA sequence
          Length = 823

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 179/220 (81%), Gaps = 2/220 (0%)
 Strand = Plus / Plus

                                                                       
Query: 360 tatgcctccagctccctctttacaaatgttggcagaataaaagcagccctatgaatctct 419
           ||||| || |||||||||||  ||||||| || |||| ||| || ||| |||| ||||||
Sbjct: 494 tatgcttctagctccctcttggcaaatgtcggaagaacaaacgctgccatatgcatctct 553

                                                                       
Query: 420 gaattgtaaaatctcatctctcgtccatctttagtagctccttcaatcttc-tcgattgg 478
           ||||| ||||| || ||||| | |||  |||||||||||||||| | |||| || |||||
Sbjct: 554 gaattataaaacctgatctcccttcccgctttagtagctccttcca-cttcttcaattgg 612

                                                                       
Query: 479 attcacaggagtcaagaagtccaccggtggaccttccttcgcgcatagcaaaaatccgat 538
           ||| ||||||||||  ||||  |||||||| || ||||| ||||||| || ||| || ||
Sbjct: 613 atttacaggagtcagaaagttgaccggtgggccatccttggcgcataacagaaacccaat 672

                                                   
Query: 539 gacaccactaggatatgttggaacacttgcccaggcatag 578
            || ||||| || |||||||| ||||| ||||| ||||||
Sbjct: 673 caccccactcgggtatgttgggacactagcccatgcatag 712
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 95/112 (84%)
 Strand = Plus / Minus

                                                                            
Query: 546      ctaggatatgttggaacacttgcccaggcatagtgcacgccgcccttgaatacctnccga 605
                |||||||| || ||||| |||| ||||||||| |||||  | |||||||||   |  |||
Sbjct: 19270144 ctaggataggtaggaacgcttgtccaggcataatgcacagctcccttgaatgtttcacga 19270085

                                                                    
Query: 606      cagatagaaagcatatnctgnattagatgtgtgtgcagccacatactttcag 657
                ||||||||||||||||  || |||||||||||||||||||||||||| ||||
Sbjct: 19270084 cagatagaaagcatatcttgaattagatgtgtgtgcagccacatactctcag 19270033



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 114/137 (83%)
 Strand = Plus / Minus

                                                                            
Query: 411      tgaatctctgaattgtaaaatctcatctctcgtccatctttagtagctccttcaatcttc 470
                |||| |||||||||||||||||| || || | |||| |||   |||||||||| |  |||
Sbjct: 19271130 tgaacctctgaattgtaaaatctgatttcccttccagcttccatagctccttccagtttc 19271071

                                                                            
Query: 471      tcgattggattcacaggagtcaagaagtccaccggtggaccttccttcgcgcatagcaaa 530
                || ||||||||||||||||  | ||||| ||| | ||||||||| ||||| |||||||||
Sbjct: 19271070 tcaattggattcacaggagaaaggaagttcactgctggaccttctttcgcacatagcaaa 19271011

                                 
Query: 531      aatccgatgacaccact 547
                || || |||||||||||
Sbjct: 19271010 aaaccaatgacaccact 19270994



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                                 
Query: 366      tccagctccctctttacaaatgttggcagaataaaagcagccctatgaa 414
                ||||| || ||| |||||||||||||||||| ||||||||||| |||||
Sbjct: 19271327 tccagttctctccttacaaatgttggcagaacaaaagcagcccgatgaa 19271279
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>dbj|AP004745.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0001B01
          Length = 147585

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 95/112 (84%)
 Strand = Plus / Minus

                                                                          
Query: 546    ctaggatatgttggaacacttgcccaggcatagtgcacgccgcccttgaatacctnccga 605
              |||||||| || ||||| |||| ||||||||| |||||  | |||||||||   |  |||
Sbjct: 107908 ctaggataggtaggaacgcttgtccaggcataatgcacagctcccttgaatgtttcacga 107849

                                                                  
Query: 606    cagatagaaagcatatnctgnattagatgtgtgtgcagccacatactttcag 657
              ||||||||||||||||  || |||||||||||||||||||||||||| ||||
Sbjct: 107848 cagatagaaagcatatcttgaattagatgtgtgtgcagccacatactctcag 107797



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 114/137 (83%)
 Strand = Plus / Minus

                                                                          
Query: 411    tgaatctctgaattgtaaaatctcatctctcgtccatctttagtagctccttcaatcttc 470
              |||| |||||||||||||||||| || || | |||| |||   |||||||||| |  |||
Sbjct: 108894 tgaacctctgaattgtaaaatctgatttcccttccagcttccatagctccttccagtttc 108835

                                                                          
Query: 471    tcgattggattcacaggagtcaagaagtccaccggtggaccttccttcgcgcatagcaaa 530
              || ||||||||||||||||  | ||||| ||| | ||||||||| ||||| |||||||||
Sbjct: 108834 tcaattggattcacaggagaaaggaagttcactgctggaccttctttcgcacatagcaaa 108775

                               
Query: 531    aatccgatgacaccact 547
              || || |||||||||||
Sbjct: 108774 aaaccaatgacaccact 108758



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                               
Query: 366    tccagctccctctttacaaatgttggcagaataaaagcagccctatgaa 414
              ||||| || ||| |||||||||||||||||| ||||||||||| |||||
Sbjct: 109091 tccagttctctccttacaaatgttggcagaacaaaagcagcccgatgaa 109043
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>dbj|AK065153.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002B15, full
           insert sequence
          Length = 1293

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 174/218 (79%)
 Strand = Plus / Minus

                                                                       
Query: 363 gcctccagctccctctttacaaatgttggcagaataaaagcagccctatgaatctctgaa 422
           ||||| ||||| ||| || |||| ||||| |||| ||| || || ||||| |||||||||
Sbjct: 957 gcctctagctctctccttgcaaaggttgggagaacaaatgcggctctatgcatctctgaa 898

                                                                       
Query: 423 ttgtaaaatctcatctctcgtccatctttagtagctccttcaatcttctcgattggattc 482
           || |||||||| || || | |||  |||   |||||||||| |  || || |||||||| 
Sbjct: 897 ttataaaatctaatatcccttcctgcttccatagctccttctagtttttcaattggattt 838

                                                                       
Query: 483 acaggagtcaagaagtccaccggtggaccttccttcgcgcatagcaaaaatccgatgaca 542
            ||||||||| |||||  || ||||||||||| || || ||||||| ||| || || |||
Sbjct: 837 gcaggagtcaggaagttgactggtggaccttctttggcacatagcagaaacccaatcaca 778

                                                 
Query: 543 ccactaggatatgttggaacacttgcccaggcatagtg 580
           ||||| |||||||| || ||||| | ||||||||||||
Sbjct: 777 ccactgggatatgtcgggacactcgtccaggcatagtg 740
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>gb|AY110118.1| Zea mays CL7038_1 mRNA sequence
          Length = 1039

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 185/236 (78%)
 Strand = Plus / Plus

                                                                       
Query: 343 tttcagtggaagtgttatatgcctccagctccctctttacaaatgttggcagaataaaag 402
           |||||||||||  |  |||||| || ||||| ||| || |||| || || |||| ||| |
Sbjct: 461 tttcagtggaaacgcaatatgcttctagctctctccttgcaaaggtcgggagaacaaatg 520

                                                                       
Query: 403 cagccctatgaatctctgaattgtaaaatctcatctctcgtccatctttagtagctcctt 462
           | |||||||| |||||||| || |||||||| ||||| | |||| |||| ||||||||||
Sbjct: 521 ctgccctatgcatctctgagttataaaatctgatctcccttccagcttttgtagctcctt 580

                                                                       
Query: 463 caatcttctcgattggattcacaggagtcaagaagtccaccggtggaccttccttcgcgc 522
           | | ||| || |||||||| | ||||||||  |||| ||||  ||||||||| || || |
Sbjct: 581 ccagcttttcaattggatttataggagtcagaaagttcaccaatggaccttctttggcac 640

                                                                   
Query: 523 atagcaaaaatccgatgacaccactaggatatgttggaacacttgcccaggcatag 578
           ||||      ||| || || ||||| || |||||||| ||||||| ||| ||||||
Sbjct: 641 atagtnnnnntccaatcaccccactcgggtatgttgggacacttgtccatgcatag 696
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>emb|AM158913.1| Plantago major partial mRNA for spermidine synthase (spds1 gene)
          Length = 689

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                       
Query: 507 ggaccttccttcgcgcatagcaaaaatccgatgacaccactaggatatgttggaacactt 566
           ||||||||| | | |||||||| |||||| ||||||||||| |||||||| |||||| | 
Sbjct: 493 ggaccttccgttgagcatagcagaaatcctatgacaccactgggatatgtaggaacatta 434

                      
Query: 567 gcccaggcata 577
           ||||| |||||
Sbjct: 433 gcccatgcata 423
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>emb|CT573028.11| M.truncatula DNA sequence from clone MTH2-51N20 on chromosome 3,
             complete sequence
          Length = 116350

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 549   ggatatgttggaacacttgcccaggcata 577
             ||||||||||||||||||||||| |||||
Sbjct: 41306 ggatatgttggaacacttgcccatgcata 41278
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>gb|AY335900.1| Lycopersicon esculentum putative spermine synthase (SPM1) mRNA,
           complete cds
          Length = 1162

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 543 ccactaggatatgttggaacacttgcccaggcata 577
           |||||||||||||| |||||||| ||||| |||||
Sbjct: 873 ccactaggatatgtaggaacactggcccatgcata 839
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                           
Query: 474     attggattcacaggagtcaagaagtccaccggtggaccttccttcgcgcatagcaaaaat 533
               ||||||||  ||||||||| |||||  || ||||||||||| || || ||||||| ||| 
Sbjct: 8726894 attggatttgcaggagtcaggaagttgactggtggaccttctttggcacatagcagaaac 8726953

                             
Query: 534     ccgatgacaccact 547
               || || ||||||||
Sbjct: 8726954 ccaatcacaccact 8726967
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>dbj|AP004875.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0463G12
          Length = 145403

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                          
Query: 474    attggattcacaggagtcaagaagtccaccggtggaccttccttcgcgcatagcaaaaat 533
              ||||||||  ||||||||| |||||  || ||||||||||| || || ||||||| ||| 
Sbjct: 133941 attggatttgcaggagtcaggaagttgactggtggaccttctttggcacatagcagaaac 134000

                            
Query: 534    ccgatgacaccact 547
              || || ||||||||
Sbjct: 134001 ccaatcacaccact 134014
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>dbj|AP006844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0052K15
          Length = 156250

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                         
Query: 474   attggattcacaggagtcaagaagtccaccggtggaccttccttcgcgcatagcaaaaat 533
             ||||||||  ||||||||| |||||  || ||||||||||| || || ||||||| ||| 
Sbjct: 25973 attggatttgcaggagtcaggaagttgactggtggaccttctttggcacatagcagaaac 26032

                           
Query: 534   ccgatgacaccact 547
             || || ||||||||
Sbjct: 26033 ccaatcacaccact 26046
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>emb|BX546477.9| Zebrafish DNA sequence from clone DKEYP-79C5 in linkage group 9,
             complete sequence
          Length = 58124

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 166   aaataaaatttggtaataaag 186
             |||||||||||||||||||||
Sbjct: 28842 aaataaaatttggtaataaag 28862
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>emb|BX322234.7| Human DNA sequence from clone XXyac-65C7_A on chromosome 6 Contains the
              THBS2 gene for thrombospondin 2, two novel genes, a
              chromosome 6 open reading frame 55 (C6orf55) pseudogene and
              two CpG islands, complete sequence
          Length = 159175

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 326    cttctccagtttctccttttc 346
              |||||||||||||||||||||
Sbjct: 106203 cttctccagtttctccttttc 106183
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>emb|CR937028.1| Zebrafish DNA sequence from clone DKEYP-79C5 in linkage group 9,
             complete sequence
          Length = 58124

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 166   aaataaaatttggtaataaag 186
             |||||||||||||||||||||
Sbjct: 28842 aaataaaatttggtaataaag 28862
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>emb|BX323576.9| Zebrafish DNA sequence from clone DKEYP-77A12 in linkage group 7,
             complete sequence
          Length = 163069

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 538   tgacaccactaggatatgttg 558
             |||||||||||||||||||||
Sbjct: 51474 tgacaccactaggatatgttg 51454
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>dbj|AK158474.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched
            library, clone:F930119H24 product:hypothetical protein,
            full insert sequence
          Length = 3275

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 374  cctctttacaaatgttggcag 394
            |||||||||||||||||||||
Sbjct: 2774 cctctttacaaatgttggcag 2754
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>emb|BX571674.7| Zebrafish DNA sequence from clone DKEY-193C22 in linkage group 5,
              complete sequence
          Length = 195181

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 153    catgtacctattgaaataaaa 173
              |||||||||||||||||||||
Sbjct: 177337 catgtacctattgaaataaaa 177317
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>emb|BX005327.9| Zebrafish DNA sequence from clone DKEY-65B16 in linkage group 7,
            complete sequence
          Length = 237129

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 538  tgacaccactaggatatgttg 558
            |||||||||||||||||||||
Sbjct: 2368 tgacaccactaggatatgttg 2388
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>gb|AC144753.3| Ornithorhynchus anatinus clone OA_Bb-228F7, complete sequence
          Length = 116899

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 223   ctcgtgggggaagatggacaacata 247
             |||| ||||||||||||||||||||
Sbjct: 98676 ctcgagggggaagatggacaacata 98652
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>emb|BX247878.5| Zebrafish DNA sequence from clone CH211-266O5 in linkage group 7,
              complete sequence
          Length = 190715

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 538    tgacaccactaggatatgttg 558
              |||||||||||||||||||||
Sbjct: 138846 tgacaccactaggatatgttg 138866
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>dbj|AB072917.2| Malus x domestica MdSPDS2b mRNA forspermidine synthase, complete
           cds
          Length = 1276

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 399 aaagcagccctatgaatctctgaattgtaaaat 431
           ||||||||  ||||||||||||| |||||||||
Sbjct: 975 aaagcagctgtatgaatctctgagttgtaaaat 943
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>dbj|AB072916.2| Malus x domestica MdSPDS2a mRNA forspermidine synthase, complete cds
          Length = 1359

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 399  aaagcagccctatgaatctctgaattgtaaaat 431
            ||||||||  ||||||||||||| |||||||||
Sbjct: 1047 aaagcagctgtatgaatctctgagttgtaaaat 1015
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>dbj|AB072915.2| Malus x domestica MdSPDS1 mRNA forspermidine synthase, complete cds
          Length = 1407

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 399  aaagcagccctatgaatctctgaattgtaaaatctca 435
            ||||||||  |||||||||| || |||||||||||||
Sbjct: 1090 aaagcagctgtatgaatctcagagttgtaaaatctca 1054
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>gb|AC139562.8| Mus musculus chromosome 5, clone RP24-180G11, complete sequence
          Length = 168158

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     acacaccatacacactcagt 101
              ||||||||||||||||||||
Sbjct: 164776 acacaccatacacactcagt 164757
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>ref|XM_654820.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2308.2), mRNA
          Length = 2487

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 71   cactagctgcaacacaccat 90
            ||||||||||||||||||||
Sbjct: 2258 cactagctgcaacacaccat 2277
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>gb|BT014416.1| Lycopersicon esculentum clone 133724F, mRNA sequence
          Length = 1353

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 546  ctaggatatgttggaacacttgcccaggcata 577
            ||||||||||| |||||||| ||||| |||||
Sbjct: 1185 ctaggatatgtaggaacactggcccatgcata 1154
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>gb|AC025724.3| Caenorhabditis elegans cosmid Y67D8C, complete sequence
          Length = 103670

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 157   tacctattgaaataaaatttggta 180
             |||||||| |||||||||||||||
Sbjct: 48809 tacctattcaaataaaatttggta 48832
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>gb|AC125327.4| Mus musculus BAC clone RP23-346B17 from chromosome 6, complete sequence
          Length = 224846

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 560    aacacttgcccaggcatagtgcac 583
              ||||||||| ||||||||||||||
Sbjct: 195077 aacacttgcacaggcatagtgcac 195054
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>gb|AC121962.3| Mus musculus chromosome UNK clone RP24-255I5, complete sequence
          Length = 152890

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 560   aacacttgcccaggcatagtgcac 583
             ||||||||| ||||||||||||||
Sbjct: 14618 aacacttgcacaggcatagtgcac 14641
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>gb|AC096917.3| Homo sapiens chromosome 3 clone RP11-94D19, complete sequence
          Length = 170184

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 323    tggcttctccagtttctccttttc 346
              ||||||||||| ||||||||||||
Sbjct: 108077 tggcttctccattttctccttttc 108100
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>emb|Z94057.1|HS518E13 Human DNA sequence from clone RP3-518E13 on chromosome 1q25 Contains
            a novel transcript and the 3' end of the TNR gene for
            tenascin R (restrictin, janusin), complete sequence
          Length = 80124

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 371  ctccctctttacaaatgttg 390
            ||||||||||||||||||||
Sbjct: 1818 ctccctctttacaaatgttg 1837
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>emb|AL096867.15|HSJ365O19 Human DNA sequence from clone RP3-365O19 on chromosome 6q23.1-24.3
              Contains the 5' end of the GRM1 gene for metabotropic
              glutamate receptor 1, complete sequence
          Length = 156935

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 162    attgaaataaaatttggtaa 181
              ||||||||||||||||||||
Sbjct: 112529 attgaaataaaatttggtaa 112548
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>emb|AL669816.3| Mouse DNA sequence from clone RP23-266C4 on chromosome 11 Contains the
             3' end of a novel gene, complete sequence
          Length = 203827

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 632   atgtgtgtgcagccacatac 651
             ||||||||||||||||||||
Sbjct: 63054 atgtgtgtgcagccacatac 63035
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>gb|AC153818.5| Mus musculus 6 BAC RP23-345F4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 193079

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 560    aacacttgcccaggcatagtgcac 583
              ||||||||| ||||||||||||||
Sbjct: 139251 aacacttgcacaggcatagtgcac 139274
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>gb|AC149149.3| Xenopus tropicalis clone ISB-175F5, complete sequence
          Length = 116498

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 238   ggacaacataggggtgtttgtccc 261
             ||||||||||| ||||||||||||
Sbjct: 97282 ggacaacatagaggtgtttgtccc 97305
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>emb|BX005328.9| Zebrafish DNA sequence from clone DKEY-63D15 in linkage group 8, complete
              sequence
          Length = 272840

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 81     aacacaccatacacactcagtgacactc 108
              ||||||||||||||||||| | ||||||
Sbjct: 193786 aacacaccatacacactcattcacactc 193759
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>gb|AC138071.2| Homo sapiens chromosome 3 clone RP11-504G20, complete sequence
          Length = 194062

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 323   tggcttctccagtttctccttttc 346
             ||||||||||| ||||||||||||
Sbjct: 42844 tggcttctccattttctccttttc 42867
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 218     cgggtctcgtgggggaagat 237
               ||||||||||||||||||||
Sbjct: 1482823 cgggtctcgtgggggaagat 1482804
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 218     cgggtctcgtgggggaagat 237
               ||||||||||||||||||||
Sbjct: 1157518 cgggtctcgtgggggaagat 1157499
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>gb|AC162461.6| Mus musculus chromosome 5, clone RP23-265I19, complete sequence
          Length = 233632

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    acacaccatacacactcagt 101
             ||||||||||||||||||||
Sbjct: 52857 acacaccatacacactcagt 52838


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,563,315
Number of Sequences: 3902068
Number of extensions: 5563315
Number of successful extensions: 107141
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106986
Number of HSP's gapped (non-prelim): 141
length of query: 657
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 634
effective length of database: 17,143,297,704
effective search space: 10868850744336
effective search space used: 10868850744336
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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