ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd27l14 |
|---|---|
| Clone Library Name | barley_pub |
>PA21B_BOVIN (P00593) Phospholipase A2 precursor (EC 3.1.1.4)| (Phosphatidylcholine 2-acylhydrolase) (Group IB phospholipase A2) Length = 145 Score = 34.3 bits (77), Expect = 0.32 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 4/51 (7%) Frame = +1 Query: 37 PIDILPQICQLHDERRTCTTNVDKCSTMVDTSHT----YSSNSGDIDASRE 177 P+D L + CQ HD +D C +VD +T YS ++ +I S E Sbjct: 59 PVDDLDRCCQTHDNCYKQAKKLDSCKVLVDNPYTNNYSYSCSNNEITCSSE 109
>PA21B_SHEEP (P14419) Phospholipase A2 (EC 3.1.1.4) (Phosphatidylcholine| 2-acylhydrolase) (Group IB phospholipase A2) Length = 123 Score = 33.1 bits (74), Expect = 0.71 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 4/51 (7%) Frame = +1 Query: 37 PIDILPQICQLHDERRTCTTNVDKCSTMVD----TSHTYSSNSGDIDASRE 177 P+D L + CQ HD +D C +VD S++YS ++ I S E Sbjct: 37 PVDDLDRCCQTHDNCYKQAKKLDSCKVLVDNPYTNSYSYSCSNKQITCSSE 87
>DUOX1_CAEEL (O61213) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-) (DUOX1)| (NADPH thyroid oxidase 1) (Blistered cuticle protein 3) Length = 1497 Score = 33.1 bits (74), Expect = 0.71 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +1 Query: 112 STMVDTSHTYSSNSGDIDASRELHITWSCSTQDSHSWFATLL 237 ST+VD SS+S R+++ W CST ++ WF +L Sbjct: 1339 STLVDLVQRTSSDSFHRVRCRKVYFLWVCSTHKNYEWFVDVL 1380
>SNX41_ASHGO (Q759T1) Sorting nexin-41| Length = 603 Score = 32.7 bits (73), Expect = 0.93 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = +1 Query: 139 YSSNSGDIDASRELHITWSCSTQDSHSWFATLLVPPISLLPTSSLGGVALAPS 297 + +N DI RE H + + W LL PP+S+LPT++L L P+ Sbjct: 215 FLNNCHDITDIRE-HTVFQKFLNPEYIWSEVLLTPPVSILPTNNLLAPPLNPT 266
>PA2_RABIT (Q7M334) Phospholipase A2 precursor (EC 3.1.1.4)| (Phosphatidylcholine 2-acylhydrolase) (Group IB phospholipase A2) Length = 144 Score = 32.7 bits (73), Expect = 0.93 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +1 Query: 37 PIDILPQICQLHDERRTCTTNVDKCSTMVDTSHTYS 144 P+D L + CQ HD+ T + CS +VD +T S Sbjct: 59 PVDELDRCCQTHDQCYTQAKKLSSCSFLVDNPYTNS 94
>PFA4_GIBZE (Q4IMZ7) Palmitoyltransferase PFA4 (EC 2.3.1.-) (Protein fatty| acyltransferase 4) Length = 437 Score = 32.3 bits (72), Expect = 1.2 Identities = 16/40 (40%), Positives = 18/40 (45%) Frame = +2 Query: 227 PPCWFHLYHCCRRAPWEESRWPHHCT*GLDCCACTTVPDF 346 PP H HC R P R HHC +C + TT P F Sbjct: 97 PPRAHHCRHCARCVP----RMDHHCPWTRNCVSMTTFPHF 132
>YCF1A_ANTFO (Q85BK9) Hypothetical 58 kDa protein ycf1 (ORF473)| Length = 473 Score = 32.0 bits (71), Expect = 1.6 Identities = 17/42 (40%), Positives = 26/42 (61%) Frame = -3 Query: 455 QKMFYTIHSRASSSRIGIDVPRVSERLRALLQLYSHENQAPS 330 QK FY+I + SSSR ++ R+++R R L LYS+ + S Sbjct: 99 QKEFYSIFASDSSSRYTREIERLNKRYRCNLFLYSYLDHTKS 140
>PA21B_PIG (P00592) Phospholipase A2, major isoenzyme precursor (EC 3.1.1.4)| (Phosphatidylcholine 2-acylhydrolase) (Group IB phospholipase A2) Length = 146 Score = 31.6 bits (70), Expect = 2.1 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = +1 Query: 37 PIDILPQICQLHDERRTCTTNVDKCSTMVDTSHTYS 144 P+D L + C+ HD N+D C +VD +T S Sbjct: 59 PVDELDRCCETHDNCYRDAKNLDSCKFLVDNPYTES 94
>PA21B_CAVPO (P43434) Phospholipase A2 precursor (EC 3.1.1.4)| (Phosphatidylcholine 2-acylhydrolase) (Group IB phospholipase A2) Length = 146 Score = 31.6 bits (70), Expect = 2.1 Identities = 11/36 (30%), Positives = 22/36 (61%) Frame = +1 Query: 37 PIDILPQICQLHDERRTCTTNVDKCSTMVDTSHTYS 144 P+D L + C++HD T +++ C +++D +T S Sbjct: 59 PVDELDRCCEIHDACYTQAKHLESCKSVIDNPYTNS 94
>PA22_PIG (P04416) Phospholipase A2, minor isoenzyme (EC 3.1.1.4)| (Phosphatidylcholine 2-acylhydrolase) Length = 124 Score = 31.6 bits (70), Expect = 2.1 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = +1 Query: 37 PIDILPQICQLHDERRTCTTNVDKCSTMVDTSHTYS 144 P+D L + C+ HD N+D C +VD +T S Sbjct: 37 PVDELDRCCETHDNCYRDAKNLDSCKFLVDNPYTNS 72
>PA21B_CANFA (P06596) Phospholipase A2 precursor (EC 3.1.1.4)| (Phosphatidylcholine 2-acylhydrolase) (Group IB phospholipase A2) Length = 146 Score = 30.8 bits (68), Expect = 3.5 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 4/49 (8%) Frame = +1 Query: 37 PIDILPQICQLHDERRTCTTNVDKCSTMVDTSHT----YSSNSGDIDAS 171 P+D L + CQ HD + +D C ++D +T YS + +I S Sbjct: 59 PVDELDKCCQTHDHCYSEAKKLDSCKFLLDNPYTKIYSYSCSGSEITCS 107
>PA21B_HUMAN (P04054) Phospholipase A2 precursor (EC 3.1.1.4)| (Phosphatidylcholine 2-acylhydrolase) (Group IB phospholipase A2) Length = 148 Score = 30.8 bits (68), Expect = 3.5 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Frame = +1 Query: 37 PIDILPQICQLHDERRTCTTNVDKCSTMVDT--SHTYS 144 P+D L + CQ HD +D C ++D +HTYS Sbjct: 59 PVDELDKCCQTHDNCYDQAKKLDSCKFLLDNPYTHTYS 96
>PA21B_MOUSE (Q9Z0Y2) Phospholipase A2 precursor (EC 3.1.1.4)| (Phosphatidylcholine 2-acylhydrolase) (Group IB phospholipase A2) (PLA2-Ib) Length = 146 Score = 30.4 bits (67), Expect = 4.6 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 4/49 (8%) Frame = +1 Query: 37 PIDILPQICQLHDERRTCTTNVDKCSTMVDTSHT----YSSNSGDIDAS 171 P+D L + CQ HD + ++ C ++D +T YS + +I S Sbjct: 59 PVDDLDRCCQTHDHCYSQAKKLESCKFLIDNPYTNTYSYSCSGSEITCS 107
>MBTP1_CRIGR (Q9Z2A8) Membrane-bound transcription factor site 1 protease| precursor (EC 3.4.21.-) (S1P endopeptidase) (Site-1 protease) (Subtilisin/kexin-isozyme 1) (SKI-1) (Sterol-regulated luminal protease) Length = 1052 Score = 30.0 bits (66), Expect = 6.0 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = -3 Query: 377 LRALLQLYSHENQAPSCMHNNQVLRYNDGANATPPKELVGNN 252 L ALLQ S+ PS H+ R GA PP+ + GN+ Sbjct: 863 LDALLQYTSYGVNPPSLSHSGNRQRPPSGAGLAPPERMEGNH 904
>PA21B_HORSE (P00594) Phospholipase A2 precursor (EC 3.1.1.4)| (Phosphatidylcholine 2-acylhydrolase) (Group IB phospholipase A2) [Contains: Phospholipase A2 isoform 2] (Fragment) Length = 132 Score = 30.0 bits (66), Expect = 6.0 Identities = 13/36 (36%), Positives = 18/36 (50%) Frame = +1 Query: 37 PIDILPQICQLHDERRTCTTNVDKCSTMVDTSHTYS 144 P+D L CQ+HD T + C +VD +T S Sbjct: 44 PVDELDACCQVHDNCYTQAKELSSCRFLVDNPYTES 79
>PA2B_MICNI (P81167) Phospholipase A2 (EC 3.1.1.4) (Nigroxin B)| (Phosphatidylcholine 2-acylhydrolase) Length = 118 Score = 30.0 bits (66), Expect = 6.0 Identities = 14/42 (33%), Positives = 24/42 (57%) Frame = +1 Query: 37 PIDILPQICQLHDERRTCTTNVDKCSTMVDTSHTYSSNSGDI 162 P+D L + CQ+HD+ +V KCS + T ++Y + G + Sbjct: 35 PVDELDKCCQVHDKCYDTAKHVCKCSPSM-TMYSYDCSEGKL 75
>PA2A_MICNI (P81166) Phospholipase A2 (EC 3.1.1.4) (Nigroxin A)| (Phosphatidylcholine 2-acylhydrolase) Length = 118 Score = 30.0 bits (66), Expect = 6.0 Identities = 14/42 (33%), Positives = 24/42 (57%) Frame = +1 Query: 37 PIDILPQICQLHDERRTCTTNVDKCSTMVDTSHTYSSNSGDI 162 P+D L + CQ+HD+ +V KCS + T ++Y + G + Sbjct: 35 PVDELDKCCQVHDKCYDTAKHVCKCSPSM-TMYSYDCSEGKL 75
>MBTP1_RAT (Q9WTZ3) Membrane-bound transcription factor site 1 protease| precursor (EC 3.4.21.-) (S1P endopeptidase) (Site-1 protease) (Subtilisin/kexin isozyme 1) (SKI-1) Length = 1052 Score = 29.6 bits (65), Expect = 7.9 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = -3 Query: 377 LRALLQLYSHENQAPSCMHNNQVLRYNDGANATPPKELVGNN 252 L ALLQ S+ PS H+ R GA PP+ + GN+ Sbjct: 863 LDALLQYTSYGVTPPSLSHSGNRQRPPSGAGLAPPERMEGNH 904
>MBTP1_MOUSE (Q9WTZ2) Membrane-bound transcription factor site 1 protease| precursor (EC 3.4.21.-) (S1P endopeptidase) (Site-1 protease) (Subtilisin/kexin isozyme 1) (SKI-1) (Sterol-regulated luminal protease) Length = 1052 Score = 29.6 bits (65), Expect = 7.9 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = -3 Query: 377 LRALLQLYSHENQAPSCMHNNQVLRYNDGANATPPKELVGNN 252 L ALLQ S+ PS H+ R GA PP+ + GN+ Sbjct: 863 LDALLQYTSYGVTPPSLSHSGNRQRPPSGAGLAPPERMEGNH 904
>YTR1_EBV (P30119) Hypothetical protein BTRF1| Length = 425 Score = 29.6 bits (65), Expect = 7.9 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Frame = -3 Query: 548 CMKRPIKLHEVITIHEEEGAEIIN-ANHSVAGQKMFYTIHSRASSSRIGI 402 C KR V+ ++ GA I+ A H +GQ +F+TIHS +S +G+ Sbjct: 11 CAKRQPPSTAVMLKCKQPGARFIHGAVHLPSGQIVFHTIHSPTLASALGL 60 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,719,109 Number of Sequences: 219361 Number of extensions: 2104486 Number of successful extensions: 6048 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 5835 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6048 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5938641176 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
