ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd27l09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_191682.1| Oryza sativa (japonica cultivar-group), predic... 184 3e-43
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 155 3e-34
3dbj|AP003273.3| Oryza sativa (japonica cultivar-group) genomic D... 155 3e-34
4gb|AY105545.1| Zea mays PCO081749 mRNA sequence 113 9e-22
5gb|AY110645.1| Zea mays CL20581_1 mRNA sequence 62 3e-06
6gb|BT019119.1| Zea mays clone Contig731.F mRNA sequence 60 1e-05
7gb|AY103921.1| Zea mays PCO126557 mRNA sequence 52 0.003
8dbj|AK111994.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.043
9ref|XM_476026.1| Oryza sativa (japonica cultivar-group), predic... 46 0.17
10gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.17
11gb|AC130727.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.17
12dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.17
13dbj|AK111911.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.17
14ref|XM_643963.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 44 0.66
15gb|AC152952.1| Mus musculus 6 BAC RP23-86B3 (Roswell Park Cancer... 42 2.6
16emb|BX842644.1| Mycoplasma mycoides subsp. mycoides SC genomic D... 42 2.6
17emb|AJ427420.1|CGI427420 Crassostrea gigas partial mRNA for bone... 42 2.6
18gb|AC016136.21| Homo sapiens 12 BAC RP11-1036M20 (Roswell Park C... 42 2.6
19gb|AF107259.1|AF107259 Homo sapiens chromosome 21q22.1 cosmid cl... 42 2.6
20dbj|BS000174.1| Pan troglodytes chromosome 22 clone:PTB-137B16, ... 42 2.6
21dbj|AP001705.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 42 2.6
22dbj|AP000239.2| Homo sapiens genomic DNA, chromosome 21q, clone:... 42 2.6
23emb|BX005047.5| Zebrafish DNA sequence from clone DKEY-38N1 in l... 42 2.6
24gb|AC132614.3| Mus musculus BAC clone RP23-298K1 from 6, complet... 42 2.6
25dbj|AP000198.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 42 2.6
26dbj|AP000094.1| Homo sapiens genomic DNA of 21q22.1, GART and AM... 42 2.6

>ref|NM_191682.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1419

 Score =  184 bits (93), Expect = 3e-43
 Identities = 282/345 (81%)
 Strand = Plus / Minus

                                                                        
Query: 407  ctagtactgagccctctcatcgccgtcaaagttaagaccttcaatacctttcagagcaga 466
            |||||||||| |||||||||| |||||||| |||||||||||||||||||| || |||||
Sbjct: 1419 ctagtactgaaccctctcatccccgtcaaaattaagaccttcaatacctttgagggcaga 1360

                                                                        
Query: 467  ctcgtagttcttcgggttagatgagtgccgggccgaagaggaacgctgtgcttctgcaga 526
            |||||| |||||   |||||||||||| ||||| ||||| ||| ||| || |||||| ||
Sbjct: 1359 ctcgtaattcttaacgttagatgagtgtcgggcagaagatgaatgctttggttctgccga 1300

                                                                        
Query: 527  atcaaccggtgggctcctctgaggacccgaggtcctacggaatgccccagggcttgcatc 586
            ||  || |||| |||  |||| ||||| ||||| || || ||||||||||||||||||||
Sbjct: 1299 attgactggtgagcttttctggggaccagaggttctccgaaatgccccagggcttgcatc 1240

                                                                        
Query: 587  agtcgtgcgtgatcgtgaaggctcaaaagtgtcacttgccacagcatcccggctgcttga 646
            ||| |  || | ||| || || ||| |||| ||| | | ||   |||| ||||| |||||
Sbjct: 1239 agtggcacgagttcgagatggttcagaagtatcaataggcatcacatctcggctacttga 1180

                                                                        
Query: 647  aacagcagctctccttgacgacccgcttgaccgccccaaaaaattcgagccggatatcgc 706
            ||||||||  |||||||| || || || || || ||||||||||||||| | |||||| |
Sbjct: 1179 aacagcaggcctccttgaagatccactagatcgtcccaaaaaattcgaggcagatatcac 1120

                                                         
Query: 707  agggtctttagaaataggagcatcatttcctacaggggctttctg 751
             || |||||||||| || |||||||||||| ||||| || |||||
Sbjct: 1119 gggctctttagaaaaagaagcatcatttcccacaggtgccttctg 1075



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  155 bits (78), Expect = 3e-34
 Identities = 243/298 (81%)
 Strand = Plus / Minus

                                                                            
Query: 407      ctagtactgagccctctcatcgccgtcaaagttaagaccttcaatacctttcagagcaga 466
                |||||||||| |||||||||| |||||||| |||||||||||||||||||| || |||||
Sbjct: 29429280 ctagtactgaaccctctcatccccgtcaaaattaagaccttcaatacctttgagggcaga 29429221

                                                                            
Query: 467      ctcgtagttcttcgggttagatgagtgccgggccgaagaggaacgctgtgcttctgcaga 526
                |||||| |||||   |||||||||||| ||||| ||||| ||| ||| || |||||| ||
Sbjct: 29429220 ctcgtaattcttaacgttagatgagtgtcgggcagaagatgaatgctttggttctgccga 29429161

                                                                            
Query: 527      atcaaccggtgggctcctctgaggacccgaggtcctacggaatgccccagggcttgcatc 586
                ||  || |||| |||  |||| ||||| ||||| || || ||||||||||||||||||||
Sbjct: 29429160 attgactggtgagcttttctggggaccagaggttctccgaaatgccccagggcttgcatc 29429101

                                                                            
Query: 587      agtcgtgcgtgatcgtgaaggctcaaaagtgtcacttgccacagcatcccggctgcttga 646
                ||| |  || | ||| || || ||| |||| ||| | | ||   |||| ||||| |||||
Sbjct: 29429100 agtggcacgagttcgagatggttcagaagtatcaataggcatcacatctcggctacttga 29429041

                                                                          
Query: 647      aacagcagctctccttgacgacccgcttgaccgccccaaaaaattcgagccggatatc 704
                ||||||||  |||||||| || || || || || ||||||||||||||| | ||||||
Sbjct: 29429040 aacagcaggcctccttgaagatccactagatcgtcccaaaaaattcgaggcagatatc 29428983



 Score =  109 bits (55), Expect = 1e-20
 Identities = 137/160 (85%), Gaps = 12/160 (7%)
 Strand = Plus / Minus

                                                                            
Query: 221      cctcgggctggccgcttatttaccgtgtccaggagaagaccatcatcatctggcagtagc 280
                |||| ||||| |||||||||||||||||||||   | ||||||||||   |||||  |||
Sbjct: 29429441 cctcaggctgaccgcttatttaccgtgtccag---aggaccatcatc---tggcaaaagc 29429388

                                                                            
Query: 281      actcctcacatcctcctcgtgacatctcctgtgatccaaaactcaacaggaaatgctgtg 340
                |||  ||||||||||||    |||| ||||||||| ||||||||||||||| ||||||||
Sbjct: 29429387 act--tcacatcctccta---acatatcctgtgatacaaaactcaacaggagatgctgtg 29429333

                                                        
Query: 341      cttatctccagattatgattttatacagagcacatgtaga 380
                || |||| |||||||||||||| |||||||||||||||||
Sbjct: 29429332 ctcatctacagattatgatttt-tacagagcacatgtaga 29429294



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 147      gaattataaagacatttacagaacc 171
                |||| ||||||||||||||||||||
Sbjct: 29429499 gaataataaagacatttacagaacc 29429475



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                         
Query: 711      tctttagaaataggagcatcatttcctacaggggctttctg 751
                |||||||||| || |||||||||||| ||||| || |||||
Sbjct: 29428663 tctttagaaaaagaagcatcatttcccacaggtgccttctg 29428623



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>dbj|AP003273.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0510F09
          Length = 138277

 Score =  155 bits (78), Expect = 3e-34
 Identities = 243/298 (81%)
 Strand = Plus / Minus

                                                                          
Query: 407    ctagtactgagccctctcatcgccgtcaaagttaagaccttcaatacctttcagagcaga 466
              |||||||||| |||||||||| |||||||| |||||||||||||||||||| || |||||
Sbjct: 124342 ctagtactgaaccctctcatccccgtcaaaattaagaccttcaatacctttgagggcaga 124283

                                                                          
Query: 467    ctcgtagttcttcgggttagatgagtgccgggccgaagaggaacgctgtgcttctgcaga 526
              |||||| |||||   |||||||||||| ||||| ||||| ||| ||| || |||||| ||
Sbjct: 124282 ctcgtaattcttaacgttagatgagtgtcgggcagaagatgaatgctttggttctgccga 124223

                                                                          
Query: 527    atcaaccggtgggctcctctgaggacccgaggtcctacggaatgccccagggcttgcatc 586
              ||  || |||| |||  |||| ||||| ||||| || || ||||||||||||||||||||
Sbjct: 124222 attgactggtgagcttttctggggaccagaggttctccgaaatgccccagggcttgcatc 124163

                                                                          
Query: 587    agtcgtgcgtgatcgtgaaggctcaaaagtgtcacttgccacagcatcccggctgcttga 646
              ||| |  || | ||| || || ||| |||| ||| | | ||   |||| ||||| |||||
Sbjct: 124162 agtggcacgagttcgagatggttcagaagtatcaataggcatcacatctcggctacttga 124103

                                                                        
Query: 647    aacagcagctctccttgacgacccgcttgaccgccccaaaaaattcgagccggatatc 704
              ||||||||  |||||||| || || || || || ||||||||||||||| | ||||||
Sbjct: 124102 aacagcaggcctccttgaagatccactagatcgtcccaaaaaattcgaggcagatatc 124045



 Score =  109 bits (55), Expect = 1e-20
 Identities = 137/160 (85%), Gaps = 12/160 (7%)
 Strand = Plus / Minus

                                                                          
Query: 221    cctcgggctggccgcttatttaccgtgtccaggagaagaccatcatcatctggcagtagc 280
              |||| ||||| |||||||||||||||||||||   | ||||||||||   |||||  |||
Sbjct: 124503 cctcaggctgaccgcttatttaccgtgtccag---aggaccatcatc---tggcaaaagc 124450

                                                                          
Query: 281    actcctcacatcctcctcgtgacatctcctgtgatccaaaactcaacaggaaatgctgtg 340
              |||  ||||||||||||    |||| ||||||||| ||||||||||||||| ||||||||
Sbjct: 124449 act--tcacatcctccta---acatatcctgtgatacaaaactcaacaggagatgctgtg 124395

                                                      
Query: 341    cttatctccagattatgattttatacagagcacatgtaga 380
              || |||| |||||||||||||| |||||||||||||||||
Sbjct: 124394 ctcatctacagattatgatttt-tacagagcacatgtaga 124356



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 147    gaattataaagacatttacagaacc 171
              |||| ||||||||||||||||||||
Sbjct: 124561 gaataataaagacatttacagaacc 124537



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                       
Query: 711    tctttagaaataggagcatcatttcctacaggggctttctg 751
              |||||||||| || |||||||||||| ||||| || |||||
Sbjct: 123725 tctttagaaaaagaagcatcatttcccacaggtgccttctg 123685



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>gb|AY105545.1| Zea mays PCO081749 mRNA sequence
          Length = 1144

 Score =  113 bits (57), Expect = 9e-22
 Identities = 276/349 (79%)
 Strand = Plus / Minus

                                                                       
Query: 407 ctagtactgagccctctcatcgccgtcaaagttaagaccttcaatacctttcagagcaga 466
           |||||||||| ||||||| ||||| ||||| | |||||||||||| ||||| ||||||||
Sbjct: 663 ctagtactgaaccctctcgtcgccatcaaaatgaagaccttcaatgcctttgagagcaga 604

                                                                       
Query: 467 ctcgtagttcttcgggttagatgagtgccgggccgaagaggaacgctgtgcttctgcaga 526
            ||||||||||||  |||||| |  |||||| | || || || ||||    |||||| ||
Sbjct: 603 atcgtagttcttcacgttagacggatgccggcctgaggatgagcgcttctgttctgcgga 544

                                                                       
Query: 527 atcaaccggtgggctcctctgaggacccgaggtcctacggaatgccccagggcttgcatc 586
           ||  || |||| ||| ||||||||||| ||||  || ||||| ||||| |||||||| ||
Sbjct: 543 atggacaggtgagcttctctgaggacctgaggctctgcggaacgcccctgggcttgcgtc 484

                                                                       
Query: 587 agtcgtgcgtgatcgtgaaggctcaaaagtgtcacttgccacagcatcccggctgcttga 646
            || |  |||| ||||||||||||  || ||||| | |||||   ||| ||||| || ||
Sbjct: 483 ggttgcacgtgctcgtgaaggctcggaactgtcagtggccaccatatcacggctactcga 424

                                                                       
Query: 647 aacagcagctctccttgacgacccgcttgaccgccccaaaaaattcgagccggatatcgc 706
           |||| |||  ||||| || || || |||||||  ||||| ||||| |  || |||||| |
Sbjct: 423 aacaacaggcctcctagaagatccacttgaccttcccaagaaatttggtccagatatcac 364

                                                            
Query: 707 agggtctttagaaataggagcatcatttcctacaggggctttctgctta 755
           || |||| |||||| || ||||||||| ||||| || ||||||||||||
Sbjct: 363 agcgtctctagaaacagtagcatcattccctaccggtgctttctgctta 315



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>gb|AY110645.1| Zea mays CL20581_1 mRNA sequence
          Length = 503

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                       
Query: 407 ctagtactgagccctctcatcgccgtcaaagttaagaccttcaatacctttcagagcaga 466
           |||||||||| ||||||| ||||| || ||  |||| |||||||| ||||| ||||| ||
Sbjct: 102 ctagtactgaaccctctcgtcgccatctaaagtaaggccttcaatgcctttgagagcgga 43

                                  
Query: 467 ctcgtagttcttcgggttagatg 489
            |||||||||||||  |||||||
Sbjct: 42  atcgtagttcttcgcattagatg 20



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>gb|BT019119.1| Zea mays clone Contig731.F mRNA sequence
          Length = 1034

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 30/30 (100%)
 Strand = Plus / Minus

                                         
Query: 464 agactcgtagttcttcgggttagatgagtg 493
           ||||||||||||||||||||||||||||||
Sbjct: 684 agactcgtagttcttcgggttagatgagtg 655



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>gb|AY103921.1| Zea mays PCO126557 mRNA sequence
          Length = 1468

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 464 agactcgtagttcttcgggttagatgagtg 493
           ||||||||||||||| ||||||||||||||
Sbjct: 959 agactcgtagttcttggggttagatgagtg 930



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>dbj|AK111994.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-D10, full
            insert sequence
          Length = 2161

 Score = 48.1 bits (24), Expect = 0.043
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 659  ccttgacgacccgcttgaccgccccaaaaaattcga 694
            |||||| |||||||||||||| ||||||||| ||||
Sbjct: 1358 ccttgaggacccgcttgaccgtcccaaaaaagtcga 1323



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>ref|XM_476026.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1422

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 648  acagcagctctccttgacgacccgcttgaccgccccaaaaaattcga 694
            ||||||| || |||||| || ||||||||||| ||||||||| ||||
Sbjct: 1184 acagcaggtcgccttgaggatccgcttgaccgtcccaaaaaagtcga 1138



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>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08,
              complete sequence
          Length = 142196

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                             
Query: 648    acagcagctctccttgacgacccgcttgaccgccccaaaaaattcga 694
              ||||||| || |||||| || ||||||||||| ||||||||| ||||
Sbjct: 130267 acagcaggtcgccttgaggatccgcttgaccgtcccaaaaaagtcga 130313



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>gb|AC130727.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560F03,
             complete sequence
          Length = 45160

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 648   acagcagctctccttgacgacccgcttgaccgccccaaaaaattcga 694
             ||||||| || |||||| || ||||||||||| ||||||||| ||||
Sbjct: 41662 acagcaggtcgccttgaggatccgcttgaccgtcccaaaaaagtcga 41616



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                               
Query: 648      acagcagctctccttgacgacccgcttgaccgccccaaaaaattcga 694
                ||||||| || |||||| || ||||||||||| ||||||||| ||||
Sbjct: 29351610 acagcaggtcgccttgaggatccgcttgaccgtcccaaaaaagtcga 29351656



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>dbj|AK111911.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124M05, full
            insert sequence
          Length = 2164

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 648  acagcagctctccttgacgacccgcttgaccgccccaaaaaattcga 694
            ||||||| || |||||| || ||||||||||| ||||||||| ||||
Sbjct: 1375 acagcaggtcgccttgaggatccgcttgaccgtcccaaaaaagtcga 1329



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>ref|XM_643963.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (348.t00007)
           partial mRNA
          Length = 972

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 103 aaggaatataaataatacaaca 124
           ||||||||||||||||||||||
Sbjct: 846 aaggaatataaataatacaaca 825



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>gb|AC152952.1| Mus musculus 6 BAC RP23-86B3 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 187484

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 102    gaaggaatataaataatacaa 122
              |||||||||||||||||||||
Sbjct: 158416 gaaggaatataaataatacaa 158396



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>emb|BX842644.1| Mycoplasma mycoides subsp. mycoides SC genomic DNA, complete sequence;
              segment 3/4
          Length = 349402

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 107    aatataaataatacaacaaac 127
              |||||||||||||||||||||
Sbjct: 311945 aatataaataatacaacaaac 311925



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 107    aatataaataatacaacaaac 127
              |||||||||||||||||||||
Sbjct: 296772 aatataaataatacaacaaac 296752



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>emb|AJ427420.1|CGI427420 Crassostrea gigas partial mRNA for bone morphogenic protein type 2
            receptor (BMP-R2 gene)
          Length = 4426

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 251  aggagaagaccatcatcatct 271
            |||||||||||||||||||||
Sbjct: 985  aggagaagaccatcatcatct 1005



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>gb|AC016136.21| Homo sapiens 12 BAC RP11-1036M20 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 176704

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 438    ttaagaccttcaatacctttc 458
              |||||||||||||||||||||
Sbjct: 154643 ttaagaccttcaatacctttc 154663



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>gb|AF107259.1|AF107259 Homo sapiens chromosome 21q22.1 cosmid clone ICRFcA0552D2, complete
             sequence, containing part of the glutamate receptor gene
             GLUR5
          Length = 42440

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 638   gctgcttgaaacagcagctct 658
             |||||||||||||||||||||
Sbjct: 16967 gctgcttgaaacagcagctct 16987



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>dbj|BS000174.1| Pan troglodytes chromosome 22 clone:PTB-137B16, map 22, complete
             sequences
          Length = 193756

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 638   gctgcttgaaacagcagctct 658
             |||||||||||||||||||||
Sbjct: 80289 gctgcttgaaacagcagctct 80309



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>dbj|AP001705.1| Homo sapiens genomic DNA, chromosome 21q, section 49/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 638    gctgcttgaaacagcagctct 658
              |||||||||||||||||||||
Sbjct: 287724 gctgcttgaaacagcagctct 287744



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>dbj|AP000239.2| Homo sapiens genomic DNA, chromosome 21q, clone:RP11-32A2, complete
              sequence
          Length = 119326

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 638    gctgcttgaaacagcagctct 658
              |||||||||||||||||||||
Sbjct: 102803 gctgcttgaaacagcagctct 102823



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>emb|BX005047.5| Zebrafish DNA sequence from clone DKEY-38N1 in linkage group 1,
             complete sequence
          Length = 141396

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 109   tataaataatacaacaaactc 129
             |||||||||||||||||||||
Sbjct: 78434 tataaataatacaacaaactc 78454



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>gb|AC132614.3| Mus musculus BAC clone RP23-298K1 from 6, complete sequence
          Length = 198160

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 102   gaaggaatataaataatacaa 122
             |||||||||||||||||||||
Sbjct: 13113 gaaggaatataaataatacaa 13093



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>dbj|AP000198.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             B355D16-T1073, segment 4/8, complete sequence
          Length = 100000

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 638   gctgcttgaaacagcagctct 658
             |||||||||||||||||||||
Sbjct: 90268 gctgcttgaaacagcagctct 90248



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>dbj|AP000094.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related,
             B335D16-P10G11 region, segment 4/7
          Length = 100000

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 638   gctgcttgaaacagcagctct 658
             |||||||||||||||||||||
Sbjct: 90268 gctgcttgaaacagcagctct 90248


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,307,678
Number of Sequences: 3902068
Number of extensions: 6307678
Number of successful extensions: 116751
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116601
Number of HSP's gapped (non-prelim): 147
length of query: 756
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 733
effective length of database: 17,143,297,704
effective search space: 12566037217032
effective search space used: 12566037217032
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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