>PALB_CANGA (Q6FJ28) Calpain-like protease palB/RIM13 (EC 3.4.22.-) (Cysteine|
           protease RIM13)
          Length = 713

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
 Frame = -2

Query: 689 HSLMNVLRYCNLDESLHGE-------DSLVCQSTLDRLHRTR-----ELDYMSNIV---- 558
           HS  ++    ++D S+ GE       D +VC  T D L   +     +LD+ S I     
Sbjct: 477 HSETDIYYLASIDFSIEGEPGITIITDMVVCLETDDDLVNFQMFHWDDLDFNSPIYDEFY 536

Query: 557 --LRMFENTEVPLEDEERFRIEMTFSR 483
              RMFE  ++PL   ER+RI  + +R
Sbjct: 537 MNERMFEKKDLPLTSGERYRIVASTAR 563

>ADA29_HUMAN (Q9UKF5) ADAM 29 precursor (A disintegrin and metalloproteinase|
           domain 29)
          Length = 820

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 19/68 (27%), Positives = 28/68 (41%)
 Frame = +2

Query: 191 LFQPFCC*FRSCGKARN*PAVQAPQRPWRSIPRLVEVQPEESPQEAWQTAAPSSQTCPVS 370
           LF   CC +R C K++     Q  Q P       ++ +P E P ++     PS    PV+
Sbjct: 687 LFILLCCLYRLCKKSKPIKKQQDVQTPSAKEEEKIQRRPHELPPQSQPWVMPSQSQPPVT 746

Query: 371 GKSQLPAV 394
                P V
Sbjct: 747 PSQSHPQV 754

>LYXK_PASMU (P57928) Probable L-xylulose kinase (EC 2.7.1.53) (L-xylulokinase)|
          Length = 483

 Score = 27.7 bits (60), Expect(2) = 2.0
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +3

Query: 342 HHLLKLVQCQARANFLQSLGAHYRQGVLLEQRRSFTGFVLERAEISTT 485
           HHL ++ +   +AN L+  G   +  + L+    FTG  LE  +I  T
Sbjct: 380 HHLERMRKRFPQANLLRVTGGPTKSPIWLQMLADFTGMRLEIPQIEET 427



 Score = 22.7 bits (47), Expect(2) = 2.0
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +2

Query: 497 FRSGTFPHLLKEPLYFRTF*ARYCSYNQ 580
           F++ +  H+   P YF  + A+Y  Y Q
Sbjct: 447 FQAQSMLHVEPNPAYFAAYQAKYQRYQQ 474

>RDRP_TNVD (P27209) RNA-directed RNA polymerase (EC 2.7.7.48) [Contains: 22|
           kDa protein]
          Length = 724

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
 Frame = +3

Query: 309 RKVLRRHGKRPHHLLKLVQCQARANFL----QSLGAHYRQGVLLEQRRSFTGFVLERAEI 476
           R+ + +HG RP H+  +V     A F+      L A  RQG  + +RR+  G   E+  +
Sbjct: 146 REEMVKHGVRPSHIAHMVPLAVAACFIPLDSDFLAASIRQGEGMRERRALLGPSWEKGGL 205

Query: 477 STTT 488
             T+
Sbjct: 206 LVTS 209

>YNG2_CANAL (Q5AHB8) Chromatin modification-related protein YNG2 (ING1 homolog|
           2)
          Length = 298

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +3

Query: 201 HFAVNSALVERPETSQPFKHPSALGEVSQD 290
           HF  + A +ER E   P +HP  L EVS+D
Sbjct: 103 HFETDIAKLERDELLPPLEHPIELTEVSKD 132

>SPL14_ARATH (Q8RY95) Squamosa promoter-binding-like protein 14 (SPL1-related|
           protein 2)
          Length = 1035

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
 Frame = -2

Query: 647 SLHGEDSLVCQSTLDRLHRTRELDYMSNIVLRMFENTEVPLEDEERFRIEMT--FSRGAD 474
           S+ GE S     +  +   +R  D  S++ L++F ++    EDE R  +  +  +   A 
Sbjct: 360 SVGGERSSSSNQSPSQDSDSRGQDTRSSLSLQLFTSSP---EDESRPTVASSRKYYSSAS 416

Query: 473 LSPLEDKTSETSPLLQE 423
            +P+ED++  +SP++QE
Sbjct: 417 SNPVEDRSPSSSPVMQE 433

>SPL16_ARATH (Q700C2) Squamosa promoter-binding-like protein 16 (SPL1-related|
           protein 3)
          Length = 988

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
 Frame = -2

Query: 590 TRELDYMSNIVLRMFENTEVPLEDEERFRIEMT--FSRGADLSPLEDKTSETSPLLQE-- 423
           +R  D  S++ L++F ++    E+E R ++  +  +   A  +P+ED++  +SP++QE  
Sbjct: 341 SRGQDTRSSLSLQLFTSSP---EEESRPKVASSTKYYSSASSNPVEDRSPSSSPVMQELF 397

Query: 422 --HTLP 411
             HT P
Sbjct: 398 PLHTSP 403

>LCMT2_ASPFU (Q4WVD1) Leucine carboxyl methyltransferase 2 (EC 2.1.1.-)|
          Length = 1047

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 19/73 (26%), Positives = 31/73 (42%)
 Frame = +3

Query: 303 SRRKVLRRHGKRPHHLLKLVQCQARANFLQSLGAHYRQGVLLEQRRSFTGFVLERAEIST 482
           S+R V   +  +PH     V+   R + L + G   R   + E  R F     ++ +   
Sbjct: 33  SKRSVELLYYPKPHFFRYFVKRPPRRSPLINRGYWLRMHAMAESVRQFMKQPSDKPKFVL 92

Query: 483 TTECHFDPEPFLI 521
              C FDP PF++
Sbjct: 93  NLGCGFDPLPFIL 105

>SIM2_MOUSE (Q61079) Single-minded homolog 2 (SIM transcription factor) (mSIM)|
          Length = 657

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 32/95 (33%), Positives = 40/95 (42%), Gaps = 12/95 (12%)
 Frame = +2

Query: 215 FRSCGKARN*PAV---QAPQRPWRSIPRLVEVQPEESPQEAWQTAAPSSQTCPVSGKSQL 385
           F SCG  R  PA+   +AP++  R   RL   +   +P E     AP  Q       +QL
Sbjct: 544 FPSCGHYREEPALGPAKAPRQASRDAARLALAR---APPECCAPPAPEPQ-----APAQL 595

Query: 386 PAV---------SRGPLSAGCAPGATEKFHWFCPR 463
           P V          RGPL +  APGA E      PR
Sbjct: 596 PFVLLNYHRVLARRGPLGS-AAPGAPEAAGSLRPR 629

>GAL1_STACA (Q9RGS1) Galactokinase (EC 2.7.1.6) (Galactose kinase)|
          Length = 388

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = -2

Query: 686 SLMNVLRYCNLDESLHGEDSLVCQSTLDRLHRTRELDYMSNIVLRMFENTEVPLEDEERF 507
           S+MN  +   L ES + E    CQS L  L +  ++D + +I +  FE     +E++   
Sbjct: 208 SIMNTNKRRELAESKYNERLKECQSALALLQQELDVDALGHIDVTTFEKHAYLIEEDVLL 267

Query: 506 R 504
           R
Sbjct: 268 R 268

>GP1BB_MOUSE (P56400) Platelet glycoprotein Ib beta chain precursor (GP-Ib beta)|
           (GPIbB) (GPIb-beta) (CD42c antigen)
          Length = 206

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 9/71 (12%)
 Frame = +2

Query: 245 PAVQAPQ---RPWRSIPRLVEVQ------PEESPQEAWQTAAPSSQTCPVSGKSQLPAVS 397
           PA++A      PWR   RL+ ++      PE +P    +  AP     P      LP V+
Sbjct: 79  PALRAAHLGANPWRCDCRLLPLRAWLAGRPERAPYRDLRCVAP-----PALRGRLLPYVA 133

Query: 398 RGPLSAGCAPG 430
              L A CAPG
Sbjct: 134 EDELRAACAPG 144


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,091,476
Number of Sequences: 219361
Number of extensions: 2113525
Number of successful extensions: 6131
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6123
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6856295237
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)