ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd27l05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_472371.1| Oryza sativa (japonica cultivar-group), predic... 289 7e-75
2dbj|AK069118.1| Oryza sativa (japonica cultivar-group) cDNA clon... 289 7e-75
3dbj|AK061185.1| Oryza sativa (japonica cultivar-group) cDNA clon... 289 7e-75
4emb|X77569.1|ZMCNXRNA Z.mays CNX mRNA 234 3e-58
5emb|AL606610.3|OSJN00045 Oryza sativa genomic DNA, chromosome 4,... 163 1e-36
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 163 1e-36
7gb|AY112482.1| Zea mays CL2224_1 mRNA sequence 133 9e-28
8dbj|AB196933.1| Glycine max Gm cnx-1 mRNA for calnexin, complete... 72 3e-09
9gb|U20502.1|GMU20502 Glycine max calnexin mRNA, complete cds 72 3e-09
10dbj|AP004932.1| Lotus japonicus genomic DNA, chromosome 1, clone... 62 3e-06
11ref|NM_125573.2| Arabidopsis thaliana calcium ion binding AT5G61... 56 2e-04
12gb|AY350714.1| Olimarabidopsis pumila clone BAC Op37I22, complet... 56 2e-04
13gb|AY050777.1| Arabidopsis thaliana At5g61790 mRNA sequence 56 2e-04
14emb|Z18242.1|ATCALHOM Arabidopsis thaliana calnexin homolog 56 2e-04
15gb|AY114669.1| Arabidopsis thaliana calnexin-like protein precur... 56 2e-04
16gb|AY065007.1| Arabidopsis thaliana AT5g61790/mac9_90 mRNA sequence 56 2e-04
17gb|AY059880.1| Arabidopsis thaliana calnexin homolog precursor (... 56 2e-04
18gb|AY086864.1| Arabidopsis thaliana clone 2869 mRNA, complete se... 56 2e-04
19dbj|AB010069.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 56 2e-04
20gb|AC139708.15| Medicago truncatula clone mth2-9f16, complete se... 54 7e-04
21emb|Y17329.1|PSA17329 Pisum sativum mRNA for calnexin 52 0.003
22gb|BT013681.1| Lycopersicon esculentum clone 132503F, mRNA sequence 50 0.011
23gb|DQ160064.1| Taraxacum officinale TO49-2 (To49-2) mRNA, partia... 50 0.011
24gb|AC141864.7| Medicago truncatula clone mth2-21o24, complete se... 50 0.011
25dbj|AB218598.1| Lycopersicon esculentum LeCNX61.0 mRNA for calne... 50 0.011
26gb|AC117567.12| Mus musculus chromosome 16, clone RP24-380O24, c... 46 0.17
27emb|AL355388.30| Human DNA sequence from clone RP11-336K24 on ch... 46 0.17
28emb|BX021091.1|CNS08OFR Single read from an extremity of a full-... 46 0.17
29gb|AC159411.1| Trypanosoma brucei chromosome 3 clone RPCI93-1J15... 44 0.66
30gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence 44 0.66
31gb|AC145376.3| Pan troglodytes BAC clone RP43-59A12 from 7, comp... 44 0.66
32ref|XM_818675.1| Trypanosoma brucei TREU927 clone RPCI93-1J15 AT... 44 0.66
33ref|XM_380667.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 44 0.66
34ref|XM_725230.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 44 0.66
35gb|AC142305.1| Pan troglodytes BAC clone RP43-130P22 from 7, com... 44 0.66
36gb|AY007706.1| Trypanosoma brucei brucei ATPase beta subunit mRN... 44 0.66
37gb|AC009401.3|AC009401 Homo sapiens PAC clone RP4-603O16 from 7q... 44 0.66
38gb|AC078842.2|AC078842 Homo sapiens chromosome 7 clone RP11-102G... 44 0.66
39emb|AL121821.7|CNS01DSN Human chromosome 14 DNA sequence BAC C-2... 44 0.66
40gb|AC153728.1| Mus musculus BAC RP23-83N17 (Roswell Park Cancer... 42 2.6
41gb|AY821658.1| Diaprepes abbreviatus putative IDGF mRNA, complet... 42 2.6
42gb|AC160118.2| Mus musculus BAC clone RP23-440L7 from chromosome... 42 2.6
43gb|AC114674.10| Mus musculus chromosome 9, clone RP24-209N21, co... 42 2.6
44gb|AC140354.2| Mus musculus BAC clone RP24-249A13 from chromosom... 42 2.6
45gb|AC110376.4| Mus musculus chromosome 12 clone RP23-441E7, comp... 42 2.6
46gb|AC164091.3| Mus musculus BAC clone RP23-97M20 from chromosome... 42 2.6
47gb|AC122015.3| Mus musculus BAC clone RP24-358M18 from chromosom... 42 2.6
48gb|AC139034.7| Mus musculus chromosome 6, clone RP23-350J11, com... 42 2.6
49emb|AL133380.5| Human DNA sequence from clone RP5-862P8 on chrom... 42 2.6
50emb|AL731728.10| Mouse DNA sequence from clone RP24-531N10 on ch... 42 2.6
51emb|AL590864.12| Mouse DNA sequence from clone RP23-96E5 on chro... 42 2.6
52gb|AC092532.17| Papio anubis clone rp41-110d13, complete sequence 42 2.6
53gb|AC006549.28| Homo sapiens chromosome 22 clone p215k21 map 22q... 42 2.6
54gb|AC058790.14| Homo sapiens chromosome 22 clone b518b9 map 22q1... 42 2.6
55gb|AC007663.29| Homo sapiens chromosome 22 clone b444p24 map 22q... 42 2.6
56gb|AC012181.8| Homo sapiens chromosome 16 clone RP11-325K4, comp... 42 2.6
57gb|AC169088.2| Gallus gallus BAC clone CH261-100B3 from chromoso... 42 2.6
58gb|AC132480.5| Mus musculus BAC clone RP23-11I14 from 6, complet... 42 2.6
59gb|AC138721.4| Mus musculus BAC clone RP23-157G22 from 6, comple... 42 2.6
60emb|AL953839.10| Mouse DNA sequence from clone RP23-325L22 on ch... 42 2.6
61emb|AL645545.8| Mouse DNA sequence from clone RP23-203J4 on chro... 42 2.6 
>ref|XM_472371.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1614

 Score =  289 bits (146), Expect = 7e-75
 Identities = 357/426 (83%), Gaps = 1/426 (0%)
 Strand = Plus / Minus

                                                                        
Query: 328  cgggcttcacaggtgccactgccttcttgccaccgaaaatggttctgaagagcacagtaa 387
            ||||||||||||| ||| ||| ||||||||| ||||| | | | |||||||||||||| |
Sbjct: 1480 cgggcttcacaggagccgctggcttcttgccgccgaacaggatcctgaagagcacagtca 1421

                                                                        
Query: 388  caaggatgacagcaactgaggccaaaatcgaaattgtaatgttgggctgcttctctccct 447
            ||| || |||| | |  ||| ||| |||   ||| || ||||||||||||||||||||||
Sbjct: 1420 caaagacgacaacgatggagaccagaattccaatggtgatgttgggctgcttctctccct 1361

                                                                        
Query: 448  tctcaattaaatcaatgatcttgatcttgtatggttccaagaacggaatgtcggcgattt 507
            ||||||||| ||||||||||||  ||||||| ||||||||||| |||||||| |||| ||
Sbjct: 1360 tctcaattacatcaatgatcttagtcttgtagggttccaagaatggaatgtcagcgagtt 1301

                                                                        
Query: 508  tgtacaaaacgctgaagatcttcttctggaactcagaaaggtcctctgactcggctgctg 567
            |||||| ||||   ||||||||||||||||||||||||||  | ||     | || ||||
Sbjct: 1300 tgtacagaacgtcaaagatcttcttctggaactcagaaagaccatcacctgctgccgctg 1241

                                                                        
Query: 568  cagcctcctcagccttctgcttttccttctcaacaacaaacttaggcttccatgtcttct 627
            | |||||||||||||||| ||| |||||||| ||  |  |||| |||||||| | |||||
Sbjct: 1240 ctgcctcctcagccttctccttctccttctctacttcgtacttgggcttccaagacttct 1181

                                                                        
Query: 628  ccaagatagacatggctaccttctcatcatcagcaattagaatgttgtcaaaaaggatgc 687
            ||| ||||||  |||| ||||||||||||||||| || | |||||||||||| |||||||
Sbjct: 1180 ccaggatagaagtggcaaccttctcatcatcagcgatcaaaatgttgtcaaacaggatgc 1121

                                                                        
Query: 688  catcctgcattgtccagatctcaatttccagtagcagcaatcggatcaaagtcaggcttg 747
            |||| ||||| ||||||||||||| | ||| |||| |||||||||||| |||||||||||
Sbjct: 1120 catcttgcatcgtccagatctcaa-tcccaatagcggcaatcggatcagagtcaggcttg 1062

                  
Query: 748  tcaagc 753
            ||||||
Sbjct: 1061 tcaagc 1056
to top
>dbj|AK069118.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008D14, full
            insert sequence
          Length = 2059

 Score =  289 bits (146), Expect = 7e-75
 Identities = 357/426 (83%), Gaps = 1/426 (0%)
 Strand = Plus / Minus

                                                                        
Query: 328  cgggcttcacaggtgccactgccttcttgccaccgaaaatggttctgaagagcacagtaa 387
            ||||||||||||| ||| ||| ||||||||| ||||| | | | |||||||||||||| |
Sbjct: 1586 cgggcttcacaggagccgctggcttcttgccgccgaacaggatcctgaagagcacagtca 1527

                                                                        
Query: 388  caaggatgacagcaactgaggccaaaatcgaaattgtaatgttgggctgcttctctccct 447
            ||| || |||| | |  ||| ||| |||   ||| || ||||||||||||||||||||||
Sbjct: 1526 caaagacgacaacgatggagaccagaattccaatggtgatgttgggctgcttctctccct 1467

                                                                        
Query: 448  tctcaattaaatcaatgatcttgatcttgtatggttccaagaacggaatgtcggcgattt 507
            ||||||||| ||||||||||||  ||||||| ||||||||||| |||||||| |||| ||
Sbjct: 1466 tctcaattacatcaatgatcttagtcttgtagggttccaagaatggaatgtcagcgagtt 1407

                                                                        
Query: 508  tgtacaaaacgctgaagatcttcttctggaactcagaaaggtcctctgactcggctgctg 567
            |||||| ||||   ||||||||||||||||||||||||||  | ||     | || ||||
Sbjct: 1406 tgtacagaacgtcaaagatcttcttctggaactcagaaagaccatcacctgctgccgctg 1347

                                                                        
Query: 568  cagcctcctcagccttctgcttttccttctcaacaacaaacttaggcttccatgtcttct 627
            | |||||||||||||||| ||| |||||||| ||  |  |||| |||||||| | |||||
Sbjct: 1346 ctgcctcctcagccttctccttctccttctctacttcgtacttgggcttccaagacttct 1287

                                                                        
Query: 628  ccaagatagacatggctaccttctcatcatcagcaattagaatgttgtcaaaaaggatgc 687
            ||| ||||||  |||| ||||||||||||||||| || | |||||||||||| |||||||
Sbjct: 1286 ccaggatagaagtggcaaccttctcatcatcagcgatcaaaatgttgtcaaacaggatgc 1227

                                                                        
Query: 688  catcctgcattgtccagatctcaatttccagtagcagcaatcggatcaaagtcaggcttg 747
            |||| ||||| ||||||||||||| | ||| |||| |||||||||||| |||||||||||
Sbjct: 1226 catcttgcatcgtccagatctcaa-tcccaatagcggcaatcggatcagagtcaggcttg 1168

                  
Query: 748  tcaagc 753
            ||||||
Sbjct: 1167 tcaagc 1162
to top
>dbj|AK061185.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-E03, full
           insert sequence
          Length = 945

 Score =  289 bits (146), Expect = 7e-75
 Identities = 357/426 (83%), Gaps = 1/426 (0%)
 Strand = Plus / Minus

                                                                       
Query: 328 cgggcttcacaggtgccactgccttcttgccaccgaaaatggttctgaagagcacagtaa 387
           ||||||||||||| ||| ||| ||||||||| ||||| | | | |||||||||||||| |
Sbjct: 472 cgggcttcacaggagccgctggcttcttgccgccgaacaggatcctgaagagcacagtca 413

                                                                       
Query: 388 caaggatgacagcaactgaggccaaaatcgaaattgtaatgttgggctgcttctctccct 447
           ||| || |||| | |  ||| ||| |||   ||| || ||||||||||||||||||||||
Sbjct: 412 caaagacgacaacgatggagaccagaattccaatggtgatgttgggctgcttctctccct 353

                                                                       
Query: 448 tctcaattaaatcaatgatcttgatcttgtatggttccaagaacggaatgtcggcgattt 507
           ||||||||| ||||||||||||  ||||||| ||||||||||| |||||||| |||| ||
Sbjct: 352 tctcaattacatcaatgatcttagtcttgtagggttccaagaatggaatgtcagcgagtt 293

                                                                       
Query: 508 tgtacaaaacgctgaagatcttcttctggaactcagaaaggtcctctgactcggctgctg 567
           |||||| ||||   ||||||||||||||||||||||||||  | ||     | || ||||
Sbjct: 292 tgtacagaacgtcaaagatcttcttctggaactcagaaagaccatcacctgctgccgctg 233

                                                                       
Query: 568 cagcctcctcagccttctgcttttccttctcaacaacaaacttaggcttccatgtcttct 627
           | |||||||||||||||| ||| |||||||| ||  |  |||| |||||||| | |||||
Sbjct: 232 ctgcctcctcagccttctccttctccttctctacttcgtacttgggcttccaagacttct 173

                                                                       
Query: 628 ccaagatagacatggctaccttctcatcatcagcaattagaatgttgtcaaaaaggatgc 687
           ||| ||||||  |||| ||||||||||||||||| || | |||||||||||| |||||||
Sbjct: 172 ccaggatagaagtggcaaccttctcatcatcagcgatcaaaatgttgtcaaacaggatgc 113

                                                                       
Query: 688 catcctgcattgtccagatctcaatttccagtagcagcaatcggatcaaagtcaggcttg 747
           |||| ||||| ||||||||||||| | ||| |||| |||||||||||| |||||||||||
Sbjct: 112 catcttgcatcgtccagatctcaa-tcccaatagcggcaatcggatcagagtcaggcttg 54

                 
Query: 748 tcaagc 753
           ||||||
Sbjct: 53  tcaagc 48
to top
>emb|X77569.1|ZMCNXRNA Z.mays CNX mRNA
          Length = 1559

 Score =  234 bits (118), Expect = 3e-58
 Identities = 277/328 (84%), Gaps = 4/328 (1%)
 Strand = Plus / Minus

                                                                        
Query: 426  atgttgggctgcttctctcccttctcaattaaatcaatgatcttgatcttgtatggttcc 485
            |||||||||||||||||||||||||| || | |||||| |||||| ||||||| ||| ||
Sbjct: 1059 atgttgggctgcttctctcccttctcgataacatcaataatcttggtcttgtagggtgcc 1000

                                                                        
Query: 486  aagaacggaatgtcggcgattttgtacaaaacgctgaagatcttcttctggaactcagaa 545
            ||||||||||| || || || |||||||  |||   || |||||||||||||| ||||||
Sbjct: 999  aagaacggaatatcagcaatcttgtacaggacgtcaaaaatcttcttctggaagtcagaa 940

                                                                        
Query: 546  aggtcctctgactcggctgctgcagcctcctcagccttctgcttttccttctcaacaaca 605
            ||  | ||||   |  | || ||||||||||||||||||| |||||||||||||||| ||
Sbjct: 939  agaccatctg---caccagcagcagcctcctcagccttctccttttccttctcaacatca 883

                                                                        
Query: 606  aacttaggcttccatgtcttctccaagatagacatggctaccttctcatcatcagcaatt 665
             |||| |||||||||||||||||||  || ||  |||| || ||||||||||||||||| 
Sbjct: 882  tacttgggcttccatgtcttctccagaatggaggtggcaactttctcatcatcagcaatc 823

                                                                        
Query: 666  agaatgttgtcaaaaaggatgccatcctgcattgtccagatctcaatttccagtagcagc 725
            |  || ||||| || ||||||||||||||||||||||||||||||| | ||| |||||||
Sbjct: 822  aagatattgtcgaacaggatgccatcctgcattgtccagatctcaa-tcccaatagcagc 764

                                        
Query: 726  aatcggatcaaagtcaggcttgtcaagc 753
            ||| |||||||| |||||| ||||||||
Sbjct: 763  aattggatcaaaatcaggcctgtcaagc 736



 Score = 50.1 bits (25), Expect = 0.011
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 243  tccttttcatcctccttgtcctccttgtcaccgctgcttcc 283
            |||||||||||||| || || ||||||||||| ||||||||
Sbjct: 1247 tccttttcatcctctttctcatccttgtcaccactgcttcc 1207
to top
>emb|AL606610.3|OSJN00045 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E08,
             complete sequence
          Length = 106975

 Score =  163 bits (82), Expect = 1e-36
 Identities = 164/190 (86%), Gaps = 1/190 (0%)
 Strand = Plus / Plus

                                                                         
Query: 564   gctgcagcctcctcagccttctgcttttccttctcaacaacaaacttaggcttccatgtc 623
             ||||| |||||||||||||||| ||| |||||||| ||  |  |||| |||||||| | |
Sbjct: 77703 gctgctgcctcctcagccttctccttctccttctctacttcgtacttgggcttccaagac 77762

                                                                         
Query: 624   ttctccaagatagacatggctaccttctcatcatcagcaattagaatgttgtcaaaaagg 683
             ||||||| ||||||  |||| ||||||||||||||||| || | |||||||||||| |||
Sbjct: 77763 ttctccaggatagaagtggcaaccttctcatcatcagcgatcaaaatgttgtcaaacagg 77822

                                                                         
Query: 684   atgccatcctgcattgtccagatctcaatttccagtagcagcaatcggatcaaagtcagg 743
             |||||||| ||||| ||||||||||||| | ||| |||| |||||||||||| |||||||
Sbjct: 77823 atgccatcttgcatcgtccagatctcaa-tcccaatagcggcaatcggatcagagtcagg 77881

                       
Query: 744   cttgtcaagc 753
             ||||||||||
Sbjct: 77882 cttgtcaagc 77891



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 66/76 (86%)
 Strand = Plus / Plus

                                                                         
Query: 460   caatgatcttgatcttgtatggttccaagaacggaatgtcggcgattttgtacaaaacgc 519
             ||||||||||  ||||||| ||||||||||| |||||||| |||| |||||||| |||| 
Sbjct: 77488 caatgatcttagtcttgtagggttccaagaatggaatgtcagcgagtttgtacagaacgt 77547

                             
Query: 520   tgaagatcttcttctg 535
               ||||||||||||||
Sbjct: 77548 caaagatcttcttctg 77563



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                            
Query: 426   atgttgggctgcttctctcccttctcaatta 456
             |||||||||||||||||||||||||||||||
Sbjct: 77338 atgttgggctgcttctctcccttctcaatta 77368
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  163 bits (82), Expect = 1e-36
 Identities = 164/190 (86%), Gaps = 1/190 (0%)
 Strand = Plus / Plus

                                                                            
Query: 564      gctgcagcctcctcagccttctgcttttccttctcaacaacaaacttaggcttccatgtc 623
                ||||| |||||||||||||||| ||| |||||||| ||  |  |||| |||||||| | |
Sbjct: 19922895 gctgctgcctcctcagccttctccttctccttctctacttcgtacttgggcttccaagac 19922954

                                                                            
Query: 624      ttctccaagatagacatggctaccttctcatcatcagcaattagaatgttgtcaaaaagg 683
                ||||||| ||||||  |||| ||||||||||||||||| || | |||||||||||| |||
Sbjct: 19922955 ttctccaggatagaagtggcaaccttctcatcatcagcgatcaaaatgttgtcaaacagg 19923014

                                                                            
Query: 684      atgccatcctgcattgtccagatctcaatttccagtagcagcaatcggatcaaagtcagg 743
                |||||||| ||||| ||||||||||||| | ||| |||| |||||||||||| |||||||
Sbjct: 19923015 atgccatcttgcatcgtccagatctcaa-tcccaatagcggcaatcggatcagagtcagg 19923073

                          
Query: 744      cttgtcaagc 753
                ||||||||||
Sbjct: 19923074 cttgtcaagc 19923083



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 66/76 (86%)
 Strand = Plus / Plus

                                                                            
Query: 460      caatgatcttgatcttgtatggttccaagaacggaatgtcggcgattttgtacaaaacgc 519
                ||||||||||  ||||||| ||||||||||| |||||||| |||| |||||||| |||| 
Sbjct: 19922680 caatgatcttagtcttgtagggttccaagaatggaatgtcagcgagtttgtacagaacgt 19922739

                                
Query: 520      tgaagatcttcttctg 535
                  ||||||||||||||
Sbjct: 19922740 caaagatcttcttctg 19922755



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                               
Query: 426      atgttgggctgcttctctcccttctcaatta 456
                |||||||||||||||||||||||||||||||
Sbjct: 19922530 atgttgggctgcttctctcccttctcaatta 19922560
to top
>gb|AY112482.1| Zea mays CL2224_1 mRNA sequence
          Length = 1661

 Score =  133 bits (67), Expect = 9e-28
 Identities = 128/147 (87%), Gaps = 1/147 (0%)
 Strand = Plus / Minus

                                                                       
Query: 607 acttaggcttccatgtcttctccaagatagacatggctaccttctcatcatcagcaatta 666
           |||| |||||||| ||||||||||  || ||  |||| || |||||||| |||||||| |
Sbjct: 881 acttgggcttccaggtcttctccagaatggaggtggcaactttctcatcgtcagcaatca 822

                                                                       
Query: 667 gaatgttgtcaaaaaggatgccatcctgcattgtccagatctcaatttccagtagcagca 726
             || |||||||| ||||||||||||||||||||||||||||||| | ||| ||||||||
Sbjct: 821 agatattgtcaaacaggatgccatcctgcattgtccagatctcaa-tcccaatagcagca 763

                                      
Query: 727 atcggatcaaagtcaggcttgtcaagc 753
           || ||||||||||||||||||||||||
Sbjct: 762 attggatcaaagtcaggcttgtcaagc 736



 Score = 83.8 bits (42), Expect = 8e-13
 Identities = 63/70 (90%)
 Strand = Plus / Minus

                                                                        
Query: 426  atgttgggctgcttctctcccttctcaattaaatcaatgatcttgatcttgtatggttcc 485
            |||||||||||||||||||||||||| || | ||||||||||||| | ||||| ||| ||
Sbjct: 1062 atgttgggctgcttctctcccttctcgataacatcaatgatcttggttttgtagggtgcc 1003

                      
Query: 486  aagaacggaa 495
            ||||||||||
Sbjct: 1002 aagaacggaa 993
to top
>dbj|AB196933.1| Glycine max Gm cnx-1 mRNA for calnexin, complete cds
          Length = 1786

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 64/72 (88%), Gaps = 1/72 (1%)
 Strand = Plus / Minus

                                                                        
Query: 672  ttgtcaaaaaggatgccatcctgcattgtccagatctcaatttccagtagcagcaatcgg 731
            |||||||| ||||||||||||||||||||||| ||||||| | ||| |||||||||| ||
Sbjct: 1268 ttgtcaaataggatgccatcctgcattgtccaaatctcaa-tgccaatagcagcaatagg 1210

                        
Query: 732  atcaaagtcagg 743
             ||||| |||||
Sbjct: 1209 ctcaaaatcagg 1198
to top
>gb|U20502.1|GMU20502 Glycine max calnexin mRNA, complete cds
          Length = 1919

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 64/72 (88%), Gaps = 1/72 (1%)
 Strand = Plus / Minus

                                                                        
Query: 672  ttgtcaaaaaggatgccatcctgcattgtccagatctcaatttccagtagcagcaatcgg 731
            |||||||| ||||||||||||||||||||||| ||||||| | ||| |||||||||| ||
Sbjct: 1208 ttgtcaaataggatgccatcctgcattgtccaaatctcaa-tgccaatagcagcaatagg 1150

                        
Query: 732  atcaaagtcagg 743
             ||||| |||||
Sbjct: 1149 ctcaaaatcagg 1138
to top
>dbj|AP004932.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT10J03, TM0094a,
             complete sequence
          Length = 65557

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 74/87 (85%), Gaps = 1/87 (1%)
 Strand = Plus / Minus

                                                                         
Query: 666   agaatgttgtcaaaaaggatgccatcctgcattgtccagatctcaatttccagtagcagc 725
             ||||| |||||||| || |||||||| ||||||||||| ||||||| | ||| |||||||
Sbjct: 13652 agaatattgtcaaatagtatgccatcttgcattgtccaaatctcaa-tgccaatagcagc 13594

                                        
Query: 726   aatcggatcaaagtcaggcttgtcaag 752
             ||| || ||||| ||||| || |||||
Sbjct: 13593 aataggctcaaaatcaggtttctcaag 13567
to top
>ref|NM_125573.2| Arabidopsis thaliana calcium ion binding AT5G61790 mRNA, complete cds
          Length = 1998

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 669  atgttgtcaaaaaggatgccatcctgcattgtccagatctcaat 712
            ||||||||||| | ||| ||||| ||||||||||||||||||||
Sbjct: 1264 atgttgtcaaacaagataccatcttgcattgtccagatctcaat 1221
to top
>gb|AY350714.1| Olimarabidopsis pumila clone BAC Op37I22, complete sequence
          Length = 84869

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 669  atgttgtcaaaaaggatgccatcctgcattgtccagatctcaat 712
            ||||||||||| | ||| ||||| ||||||||||||||||||||
Sbjct: 2903 atgttgtcaaataagataccatcttgcattgtccagatctcaat 2860
to top
>gb|AY050777.1| Arabidopsis thaliana At5g61790 mRNA sequence
          Length = 1908

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 669  atgttgtcaaaaaggatgccatcctgcattgtccagatctcaat 712
            ||||||||||| | ||| ||||| ||||||||||||||||||||
Sbjct: 1259 atgttgtcaaacaagataccatcttgcattgtccagatctcaat 1216
to top
>emb|Z18242.1|ATCALHOM Arabidopsis thaliana calnexin homolog
          Length = 1858

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 669  atgttgtcaaaaaggatgccatcctgcattgtccagatctcaat 712
            ||||||||||| | ||| ||||| ||||||||||||||||||||
Sbjct: 1237 atgttgtcaaacaagataccatcttgcattgtccagatctcaat 1194
to top
>gb|AY114669.1| Arabidopsis thaliana calnexin-like protein precursor (At5g61790)
            mRNA, complete cds
          Length = 1671

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 669  atgttgtcaaaaaggatgccatcctgcattgtccagatctcaat 712
            ||||||||||| | ||| ||||| ||||||||||||||||||||
Sbjct: 1151 atgttgtcaaacaagataccatcttgcattgtccagatctcaat 1108
to top
>gb|AY065007.1| Arabidopsis thaliana AT5g61790/mac9_90 mRNA sequence
          Length = 1910

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 669  atgttgtcaaaaaggatgccatcctgcattgtccagatctcaat 712
            ||||||||||| | ||| ||||| ||||||||||||||||||||
Sbjct: 1263 atgttgtcaaacaagataccatcttgcattgtccagatctcaat 1220
to top
>gb|AY059880.1| Arabidopsis thaliana calnexin homolog precursor (MAC9.11) mRNA,
            complete cds
          Length = 1919

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 669  atgttgtcaaaaaggatgccatcctgcattgtccagatctcaat 712
            ||||||||||| | ||| ||||| ||||||||||||||||||||
Sbjct: 1262 atgttgtcaaacaagataccatcttgcattgtccagatctcaat 1219
to top
>gb|AY086864.1| Arabidopsis thaliana clone 2869 mRNA, complete sequence
          Length = 1897

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 669  atgttgtcaaaaaggatgccatcctgcattgtccagatctcaat 712
            ||||||||||| | ||| ||||| ||||||||||||||||||||
Sbjct: 1264 atgttgtcaaacaagataccatcttgcattgtccagatctcaat 1221
to top
>dbj|AB010069.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MAC9
          Length = 57246

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                         
Query: 669   atgttgtcaaaaaggatgccatcctgcattgtccagatctcaat 712
             ||||||||||| | ||| ||||| ||||||||||||||||||||
Sbjct: 33528 atgttgtcaaacaagataccatcttgcattgtccagatctcaat 33571
to top
>gb|AC139708.15| Medicago truncatula clone mth2-9f16, complete sequence
          Length = 117358

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                
Query: 550   cctctgactcggctgctgcagcctcctcagccttctgcttttccttctcaa 600
             |||||||||| ||||||||  |||| |||||||||||||| || |||||||
Sbjct: 90997 cctctgactcagctgctgcctcctcttcagccttctgcttctctttctcaa 90947



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 66/78 (84%), Gaps = 1/78 (1%)
 Strand = Plus / Minus

                                                                         
Query: 675   tcaaaaaggatgccatcctgcattgtccagatctcaatttccagtagcagcaatcggatc 734
             ||||| || ||||| |||||||||||||| || |||| | ||| |||||||||| || ||
Sbjct: 90872 tcaaatagaatgccgtcctgcattgtccaaatttcaa-taccaatagcagcaataggctc 90814

                               
Query: 735   aaagtcaggcttgtcaag 752
             ||||||||| || |||||
Sbjct: 90813 aaagtcaggtttctcaag 90796
to top
>emb|Y17329.1|PSA17329 Pisum sativum mRNA for calnexin
          Length = 1951

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 57/66 (86%), Gaps = 1/66 (1%)
 Strand = Plus / Minus

                                                                        
Query: 675  tcaaaaaggatgccatcctgcattgtccagatctcaatttccagtagcagcaatcggatc 734
            ||||| ||||||||||| ||||||||||| || |||| | ||| |||||||||| || ||
Sbjct: 1202 tcaaataggatgccatcttgcattgtccaaatttcaa-tgccaatagcagcaataggctc 1144

                  
Query: 735  aaagtc 740
            ||||||
Sbjct: 1143 aaagtc 1138
to top
>gb|BT013681.1| Lycopersicon esculentum clone 132503F, mRNA sequence
          Length = 1836

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 684  atgccatcctgcattgtccagatctcaat 712
            |||||||| ||||||||||||||||||||
Sbjct: 1148 atgccatcttgcattgtccagatctcaat 1120
to top
>gb|DQ160064.1| Taraxacum officinale TO49-2 (To49-2) mRNA, partial cds
          Length = 416

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 47/53 (88%), Gaps = 1/53 (1%)
 Strand = Plus / Minus

                                                                
Query: 687 ccatcctgcattgtccagatctcaatttccagtagcagcaatcggatcaaagt 739
           ||||| ||||| ||||||||||||| | ||| ||||||||||||| |||||||
Sbjct: 333 ccatcttgcatagtccagatctcaa-tcccaatagcagcaatcggctcaaagt 282



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 605 aaacttaggcttccatgtcttctcc 629
           ||||||||||||||||||| |||||
Sbjct: 415 aaacttaggcttccatgtcgtctcc 391
to top
>gb|AC141864.7| Medicago truncatula clone mth2-21o24, complete sequence
          Length = 106571

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 684   atgccatcctgcattgtccagatctcaat 712
             |||||||||||||||||||| ||||||||
Sbjct: 99893 atgccatcctgcattgtccaaatctcaat 99921
to top
>dbj|AB218598.1| Lycopersicon esculentum LeCNX61.0 mRNA for calnexin-like protein,
            complete cds
          Length = 1964

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 684  atgccatcctgcattgtccagatctcaat 712
            |||||||| ||||||||||||||||||||
Sbjct: 1258 atgccatcttgcattgtccagatctcaat 1230
to top
>gb|AC117567.12| Mus musculus chromosome 16, clone RP24-380O24, complete sequence
          Length = 195972

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 249    tcatcctccttgtcctccttgtc 271
              |||||||||||||||||||||||
Sbjct: 100330 tcatcctccttgtcctccttgtc 100308
to top
>emb|AL355388.30| Human DNA sequence from clone RP11-336K24 on chromosome 1 Contains the 5'
              end of the RIT1 gene for Ras-like without CAAX 1, the gene
              for a novel protein (KIAA0907), the ARHGEF2 gene for
              rho/rac guanine nucleotide exchange factor (GEF) 2, four
              novel genes, the SSR2 gene for signal sequence receptor
              beta (translocon-associated protein beta), the C1orf6 gene
              for chromosome 1 open reading frame 6, the gene for
              mitogen-activated protein-binding protein-interacting
              protein (MAPBPIP), the RAB25 gene for RAB25 (member RAS
              oncogene family), the 5' end of the LMNA gene for lamin A/C
              and three CpG islands, complete sequence
          Length = 205463

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 249    tcatcctccttgtcctccttgtc 271
              |||||||||||||||||||||||
Sbjct: 126619 tcatcctccttgtcctccttgtc 126597
to top
>emb|BX021091.1|CNS08OFR Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA31BA10 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 358

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 460 caatgatcttgatcttgtatggt 482
           |||||||||||||||||||||||
Sbjct: 39  caatgatcttgatcttgtatggt 61
to top
>gb|AC159411.1| Trypanosoma brucei chromosome 3 clone RPCI93-1J15, complete sequence
          Length = 157158

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 567   gcagcctcctcagccttctgcttttccttctcaa 600
             ||||||||||||||| ||| |||| |||||||||
Sbjct: 75883 gcagcctcctcagccatcttctttgccttctcaa 75916
to top
>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence
          Length = 1653225

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 567    gcagcctcctcagccttctgcttttccttctcaa 600
              ||||||||||||||| ||| |||| |||||||||
Sbjct: 345993 gcagcctcctcagccatcttctttgccttctcaa 345960
to top
>gb|AC145376.3| Pan troglodytes BAC clone RP43-59A12 from 7, complete sequence
          Length = 221727

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 637   acatggctaccttctcatcatc 658
             ||||||||||||||||||||||
Sbjct: 30082 acatggctaccttctcatcatc 30103
to top
>ref|XM_818675.1| Trypanosoma brucei TREU927 clone RPCI93-1J15 ATP synthase subunit
            beta precursor (Tb927.3.1380) partial mRNA
          Length = 1560

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 567  gcagcctcctcagccttctgcttttccttctcaa 600
            ||||||||||||||| ||| |||| |||||||||
Sbjct: 1511 gcagcctcctcagccatcttctttgccttctcaa 1478
to top
>ref|XM_380667.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00491.1)
            partial mRNA
          Length = 1689

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 668  aatgttgtcaaaaaggatgccatcctgcattgtccagatctc 709
            |||||||||||| |||||| | | |||||| |||||||||||
Sbjct: 1236 aatgttgtcaaagaggatgtcgttctgcatggtccagatctc 1195
to top
>ref|XM_725230.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY02442)
            partial mRNA
          Length = 9570

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 3    tgatacaaaagaaaaagaaaat 24
            ||||||||||||||||||||||
Sbjct: 8364 tgatacaaaagaaaaagaaaat 8385
to top
>gb|AC142305.1| Pan troglodytes BAC clone RP43-130P22 from 7, complete sequence
          Length = 173535

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 637    acatggctaccttctcatcatc 658
              ||||||||||||||||||||||
Sbjct: 149903 acatggctaccttctcatcatc 149924
to top
>gb|AY007706.1| Trypanosoma brucei brucei ATPase beta subunit mRNA, complete cds;
            nuclear gene for kinetoplast product
          Length = 1557

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 567  gcagcctcctcagccttctgcttttccttctcaa 600
            ||||||||||||||| ||| |||| |||||||||
Sbjct: 1508 gcagcctcctcagccatcttctttgccttctcaa 1475
to top
>gb|AC009401.3|AC009401 Homo sapiens PAC clone RP4-603O16 from 7q31-q35, complete sequence
          Length = 122079

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 637   acatggctaccttctcatcatc 658
             ||||||||||||||||||||||
Sbjct: 34746 acatggctaccttctcatcatc 34725
to top
>gb|AC078842.2|AC078842 Homo sapiens chromosome 7 clone RP11-102G17, complete sequence
          Length = 173844

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 637    acatggctaccttctcatcatc 658
              ||||||||||||||||||||||
Sbjct: 150177 acatggctaccttctcatcatc 150198
to top
>emb|AL121821.7|CNS01DSN Human chromosome 14 DNA sequence BAC C-2298J14 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 127539

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 250   catcctccttgtcctccttgtc 271
             ||||||||||||||||||||||
Sbjct: 35095 catcctccttgtcctccttgtc 35074
to top
>gb|AC153728.1| Mus musculus  BAC RP23-83N17 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 226417

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 3      tgatacaaaagaaaaagaaaa 23
              |||||||||||||||||||||
Sbjct: 119160 tgatacaaaagaaaaagaaaa 119180
to top
>gb|AY821658.1| Diaprepes abbreviatus putative IDGF mRNA, complete cds
          Length = 1403

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 480 ggttccaagaacggaatgtcg 500
           |||||||||||||||||||||
Sbjct: 178 ggttccaagaacggaatgtcg 158
to top
>gb|AC160118.2| Mus musculus BAC clone RP23-440L7 from chromosome 9, complete
            sequence
          Length = 198672

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 562  ctgctgcagcctcctcagcct 582
            |||||||||||||||||||||
Sbjct: 4822 ctgctgcagcctcctcagcct 4842
to top
>gb|AC114674.10| Mus musculus chromosome 9, clone RP24-209N21, complete sequence
          Length = 203120

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 562    ctgctgcagcctcctcagcct 582
              |||||||||||||||||||||
Sbjct: 149355 ctgctgcagcctcctcagcct 149375
to top
>gb|AC140354.2| Mus musculus BAC clone RP24-249A13 from chromosome 12, complete sequence
          Length = 157998

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 249    tcatcctccttgtcctccttg 269
              |||||||||||||||||||||
Sbjct: 114830 tcatcctccttgtcctccttg 114810
to top
>gb|AC110376.4| Mus musculus chromosome 12 clone RP23-441E7, complete sequence
          Length = 190516

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 249   tcatcctccttgtcctccttg 269
             |||||||||||||||||||||
Sbjct: 58033 tcatcctccttgtcctccttg 58013
to top
>gb|AC164091.3| Mus musculus BAC clone RP23-97M20 from chromosome 3, complete sequence
          Length = 218807

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 718   gtagcagcaatcggatcaaag 738
             |||||||||||||||||||||
Sbjct: 81169 gtagcagcaatcggatcaaag 81149
to top
>gb|AC122015.3| Mus musculus BAC clone RP24-358M18 from chromosome 6, complete sequence
          Length = 166966

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 243    tccttttcatcctccttgtcctccttgtc 271
              |||||||| |||||||| |||||||||||
Sbjct: 159153 tccttttcctcctccttttcctccttgtc 159125
to top
>gb|AC139034.7| Mus musculus chromosome 6, clone RP23-350J11, complete sequence
          Length = 247394

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 3     tgatacaaaagaaaaagaaaa 23
             |||||||||||||||||||||
Sbjct: 70087 tgatacaaaagaaaaagaaaa 70107
to top
>emb|AL133380.5| Human DNA sequence from clone RP5-862P8 on chromosome 1q42.2-43
             Contains a ribosomal protein S7 (RPS7) pseudogene, pecanex
             homolog (Drosophila) (PCNX) pseudogene and the gene for
             mixed lineage kinase 4 (KIAA1804), complete sequence
          Length = 118632

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 42    gacatcacacaaacaacacaa 62
             |||||||||||||||||||||
Sbjct: 19451 gacatcacacaaacaacacaa 19471
to top
>emb|AL731728.10| Mouse DNA sequence from clone RP24-531N10 on chromosome 11 Contains
             part of the Car10 gene for carbonic anhydrase 10, complete
             sequence
          Length = 146735

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 46    tcacacaaacaacacaaagct 66
             |||||||||||||||||||||
Sbjct: 82061 tcacacaaacaacacaaagct 82081
to top
>emb|AL590864.12| Mouse DNA sequence from clone RP23-96E5 on chromosome 13 contains two
              novel genes, ribosomal protein L17 (Rpl17), S19 (Rps19) and
              L27A (Rpl27a) pseudogenes and a CpG island, complete
              sequence
          Length = 196857

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 43     acatcacacaaacaacacaaa 63
              |||||||||||||||||||||
Sbjct: 173519 acatcacacaaacaacacaaa 173499
to top
>gb|AC092532.17| Papio anubis clone rp41-110d13, complete sequence
          Length = 157944

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 559    cggctgctgcagcctcctcag 579
              |||||||||||||||||||||
Sbjct: 113341 cggctgctgcagcctcctcag 113361
to top
>gb|AC006549.28| Homo sapiens chromosome 22 clone p215k21 map 22q11, complete sequence
          Length = 174840

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 559    cggctgctgcagcctcctcag 579
              |||||||||||||||||||||
Sbjct: 152055 cggctgctgcagcctcctcag 152035
to top
>gb|AC058790.14| Homo sapiens chromosome 22 clone b518b9 map 22q11, complete sequence
          Length = 184929

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 559    cggctgctgcagcctcctcag 579
              |||||||||||||||||||||
Sbjct: 132175 cggctgctgcagcctcctcag 132155
to top
>gb|AC007663.29| Homo sapiens chromosome 22 clone b444p24 map 22q11, complete sequence
          Length = 168239

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 559    cggctgctgcagcctcctcag 579
              |||||||||||||||||||||
Sbjct: 120301 cggctgctgcagcctcctcag 120281
to top
>gb|AC012181.8| Homo sapiens chromosome 16 clone RP11-325K4, complete sequence
          Length = 189712

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 432    ggctgcttctctcccttctca 452
              |||||||||||||||||||||
Sbjct: 120872 ggctgcttctctcccttctca 120892
to top
>gb|AC169088.2| Gallus gallus BAC clone CH261-100B3 from chromosome ul, complete
             sequence
          Length = 214859

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 539   ctcagaaaggtcctctgactc 559
             |||||||||||||||||||||
Sbjct: 18108 ctcagaaaggtcctctgactc 18128
to top
>gb|AC132480.5| Mus musculus BAC clone RP23-11I14 from 6, complete sequence
          Length = 230313

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 3      tgatacaaaagaaaaagaaaa 23
              |||||||||||||||||||||
Sbjct: 167719 tgatacaaaagaaaaagaaaa 167699
to top
>gb|AC138721.4| Mus musculus BAC clone RP23-157G22 from 6, complete sequence
          Length = 187385

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 243    tccttttcatcctccttgtcctccttgtc 271
              |||||||| |||||||| |||||||||||
Sbjct: 111707 tccttttcctcctccttttcctccttgtc 111679
to top
>emb|AL953839.10| Mouse DNA sequence from clone RP23-325L22 on chromosome 4, complete
             sequence
          Length = 80682

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 243   tccttttcatcctccttgtcctccttgtc 271
             ||||| || ||||||||||||||||||||
Sbjct: 68018 tccttctcctcctccttgtcctccttgtc 67990
to top
>emb|AL645545.8| Mouse DNA sequence from clone RP23-203J4 on chromosome X, complete
              sequence
          Length = 181243

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 662    aattagaatgttgtcaaaaag 682
              |||||||||||||||||||||
Sbjct: 163540 aattagaatgttgtcaaaaag 163520


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8,519,524
Number of Sequences: 3902068
Number of extensions: 8519524
Number of successful extensions: 337909
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 337487
Number of HSP's gapped (non-prelim): 408
length of query: 753
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 730
effective length of database: 17,143,297,704
effective search space: 12514607323920
effective search space used: 12514607323920
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
to top