>EFP_SYNEL (Q8DJD3) Elongation factor P (EF-P)|
          Length = 185

 Score = 33.9 bits (76), Expect = 0.34
 Identities = 21/52 (40%), Positives = 31/52 (59%)
 Frame = +3

Query: 372 RAGLDVLLDVAVHRLVGALLHVRPGEAGLEVRRHLAHLHRADLVVQRTHRHG 527
           R G+ + LD AV R+V   LHV+PG+    VR  L ++   + V++RT R G
Sbjct: 8   RPGVSIELDGAVWRVV-EFLHVKPGKGSAFVRTKLKNVQTGN-VIERTFRAG 57

>EFP_LACPL (Q88WN1) Elongation factor P (EF-P)|
          Length = 185

 Score = 32.3 bits (72), Expect = 0.99
 Identities = 21/58 (36%), Positives = 31/58 (53%)
 Frame = +3

Query: 378 GLDVLLDVAVHRLVGALLHVRPGEAGLEVRRHLAHLHRADLVVQRTHRHGRDLGDLPL 551
           GL + +D A+ R+V    HV+PG+ G  VR  L +L R   V  +T R G  +   P+
Sbjct: 10  GLTIEVDNAIWRIV-EFQHVKPGKGGAFVRSKLKNL-RTGAVQDKTFRAGARMEQAPI 65

>EFP_SYNY3 (Q55119) Elongation factor P (EF-P)|
          Length = 187

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 19/52 (36%), Positives = 30/52 (57%)
 Frame = +3

Query: 372 RAGLDVLLDVAVHRLVGALLHVRPGEAGLEVRRHLAHLHRADLVVQRTHRHG 527
           R G  +++D AV ++V   LHV+PG+    VR  L  +   + VV++T R G
Sbjct: 8   RTGTSIVMDGAVWKVV-EFLHVKPGKGSAFVRTKLKSVQTGN-VVEKTFRAG 57

>EFP_PROMA (Q7VEI7) Elongation factor P (EF-P)|
          Length = 186

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 22/52 (42%), Positives = 30/52 (57%)
 Frame = +3

Query: 372 RAGLDVLLDVAVHRLVGALLHVRPGEAGLEVRRHLAHLHRADLVVQRTHRHG 527
           R G  + LD AV R+V   LHV+PG+    VR  L  + +A  VV++T R G
Sbjct: 8   RTGTTIELDGAVWRVV-EFLHVKPGKGSAFVRTKLKAV-QAGNVVEKTFRAG 57

>EFP_PROMM (Q7V9B9) Elongation factor P (EF-P)|
          Length = 186

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 21/55 (38%), Positives = 30/55 (54%)
 Frame = +3

Query: 372 RAGLDVLLDVAVHRLVGALLHVRPGEAGLEVRRHLAHLHRADLVVQRTHRHGRDL 536
           R G  + LD +V R+V   LHV+PG+    VR  L  +   + VV++T R G  L
Sbjct: 8   RTGTSIELDGSVWRVV-EFLHVKPGKGSAFVRTKLKAVQSGN-VVEKTFRAGEML 60

>EFP_SYNP7 (Q54760) Elongation factor P (EF-P)|
          Length = 185

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 20/52 (38%), Positives = 29/52 (55%)
 Frame = +3

Query: 372 RAGLDVLLDVAVHRLVGALLHVRPGEAGLEVRRHLAHLHRADLVVQRTHRHG 527
           R G  + +D AV R+V   LHV+PG+    VR  L +    + VV++T R G
Sbjct: 8   RTGTTIEIDGAVWRVV-EFLHVKPGKGSAFVRTKLKNAKTGN-VVEKTFRAG 57

>EFP_SYNP6 (Q5N1T5) Elongation factor P (EF-P)|
          Length = 185

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 20/52 (38%), Positives = 29/52 (55%)
 Frame = +3

Query: 372 RAGLDVLLDVAVHRLVGALLHVRPGEAGLEVRRHLAHLHRADLVVQRTHRHG 527
           R G  + +D AV R+V   LHV+PG+    VR  L +    + VV++T R G
Sbjct: 8   RTGTTIEIDGAVWRVV-EFLHVKPGKGSAFVRTKLKNAKTGN-VVEKTFRAG 57

>EFP_SYNPX (Q7UA67) Elongation factor P (EF-P)|
          Length = 187

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 21/55 (38%), Positives = 30/55 (54%)
 Frame = +3

Query: 372 RAGLDVLLDVAVHRLVGALLHVRPGEAGLEVRRHLAHLHRADLVVQRTHRHGRDL 536
           R G  + +D AV R+V   LHV+PG+    VR  L  +   + VV++T R G  L
Sbjct: 8   RTGTTIEIDGAVWRVV-EFLHVKPGKGSAFVRSKLKAVKTGN-VVEKTFRAGEML 60

>ASPM_CANFA (P62286) Abnormal spindle-like microcephaly-associated protein|
            homolog (Fragment)
          Length = 3452

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 12/38 (31%), Positives = 24/38 (63%)
 Frame = +3

Query: 408  HRLVGALLHVRPGEAGLEVRRHLAHLHRADLVVQRTHR 521
            ++L  +++ ++ G  G++ RRHL  +H A  ++QR  R
Sbjct: 2229 NKLRHSIIRIQAGFRGMKARRHLKSMHLAATLIQRRFR 2266

>KCNH6_RAT (O54853) Potassium voltage-gated channel subfamily H member 6|
           (Voltage-gated potassium channel subunit Kv11.2)
           (Ether-a-go-go-related gene potassium channel 2)
           (Ether-a-go-go-related protein 2) (Eag-related protein
           2)
          Length = 950

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 12/58 (20%)
 Frame = +3

Query: 366 LRRAGLDVLLDVAVHRLVG--------ALLHVRPGEAGLEVRR----HLAHLHRADLV 503
           + R  +++L D  V  ++G        A LH RPG++  +VR      L  +HRADL+
Sbjct: 634 ISRGSIEILRDDVVVAILGKNDIFGEPASLHARPGKSSADVRALTYCDLHKIHRADLL 691

>ASPM_SAIBB (P62296) Abnormal spindle-like microcephaly-associated protein|
            homolog
          Length = 3469

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 13/38 (34%), Positives = 25/38 (65%)
 Frame = +3

Query: 408  HRLVGALLHVRPGEAGLEVRRHLAHLHRADLVVQRTHR 521
            ++L  +++H++    G++VRRHL  +H A  ++QR  R
Sbjct: 2228 NKLRHSVIHIQAIFRGMKVRRHLKTMHIAATLIQRRFR 2265

>EFP_PROMP (Q7V3P5) Elongation factor P (EF-P)|
          Length = 186

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 19/55 (34%), Positives = 29/55 (52%)
 Frame = +3

Query: 372 RAGLDVLLDVAVHRLVGALLHVRPGEAGLEVRRHLAHLHRADLVVQRTHRHGRDL 536
           R G  + +D  V R+V   LHV+PG+    VR  L  +   + VV++T R G  +
Sbjct: 8   RTGTTIEIDGQVWRVV-EFLHVKPGKGSAFVRTKLKSVRNGN-VVEKTFRAGESV 60


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,979,909
Number of Sequences: 219361
Number of extensions: 1057011
Number of successful extensions: 3111
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3111
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4872342800
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)