ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd27k20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK058226.1| Oryza sativa (japonica cultivar-group) cDNA clon... 240 5e-60
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 170 4e-39
3gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 170 4e-39
4emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa... 170 4e-39
5dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 163 1e-36
6gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 163 1e-36
7emb|BX000491.1|CNS08CDH Oryza sativa chromosome 12, . BAC OSJNBb... 163 1e-36
8gb|BT018302.1| Zea mays clone EL01T0206E01.c mRNA sequence 111 3e-21
9gb|BT016858.1| Zea mays clone Contig691 mRNA sequence 111 3e-21
10gb|AY103752.1| Zea mays PCO092520 mRNA sequence 111 3e-21
11gb|U42608.1|GMU42608 Glycine max clathrin heavy chain mRNA, comp... 84 7e-13
12dbj|AK058259.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 5e-11
13gb|AY960125.1| Medicago truncatula geranylgeranyl reductase mRNA... 64 7e-07
14dbj|AP004467.1| Lotus japonicus genomic DNA, chromosome 1, clone... 50 0.010
15emb|AL389887.7| Human DNA sequence from clone RP11-54F22 on chro... 46 0.16
16emb|BX601644.6| Zebrafish DNA sequence from clone DKEY-21O13 in ... 46 0.16
17gb|AC144729.29| Medicago truncatula clone mth2-15j6, complete se... 44 0.63
18gb|AC142498.21| Medicago truncatula clone mth2-24a18, complete s... 42 2.5
19gb|AC006058.1| Homo sapiens 3p22-7 PAC RPCI4-555D20 (Roswell Par... 42 2.5
20gb|AC092624.2| Homo sapiens BAC clone RP11-261J9 from 2, complet... 42 2.5
21gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1... 42 2.5
22emb|CT573029.5| M.truncatula DNA sequence from clone MTH2-67H11 ... 42 2.5
23emb|AL512414.2|CNS07EFC Human chromosome 14 DNA sequence BAC R-6... 42 2.5
24gb|DQ396371.1| HIV-1 isolate 03ZAPS155MB1 from South Africa, com... 40 9.8
25gb|AC115073.9| Mus musculus chromosome 8, clone RP24-417J18, com... 40 9.8
26emb|CT009510.7| Mouse DNA sequence from clone RP23-47H16 on chro... 40 9.8
27gb|AC013285.10| Homo sapiens chromosome 10 clone RP11-143D9, com... 40 9.8
28gb|AY142078.1| Borrelia burgdorferi strain Sh-2-82 plasmid cp18-... 40 9.8
29emb|CR855994.1| Wallaby DNA sequence from clone MEKBa-69G12, com... 40 9.8
30emb|CR457441.5| Zebrafish DNA sequence from clone CH211-181D7 in... 40 9.8
31emb|BX572091.1| Prochlorococcus marinus MED4 complete genome; se... 40 9.8
32emb|BX649546.11| Zebrafish DNA sequence from clone DKEY-27C18 in... 40 9.8
33gb|AC024603.7| Homo sapiens chromosome 10 clone RP11-325D15, com... 40 9.8
34gb|AC182810.1| Gasterosteus aculeatus clone VMRC28-119K03, compl... 40 9.8
35gb|AC097475.2| Homo sapiens BAC clone RP11-95J1 from 4, complete... 40 9.8
36gb|AC092169.4| Homo sapiens BAC clone RP11-791I11 from 2, comple... 40 9.8
37gb|AC013440.7| Homo sapiens BAC clone RP11-292A20 from 2, comple... 40 9.8
38ref|XM_318677.2| Anopheles gambiae str. PEST ENSANGP00000004639 ... 40 9.8
39emb|AL391158.5|CNS06C83 Human chromosome 14 DNA sequence BAC R-5... 40 9.8
40gb|AF077603.1|AF077603 Borrelia burgdorferi strain 297 plasmid-e... 40 9.8
41emb|AL935160.11| Zebrafish DNA sequence from clone CH211-184C7 i... 40 9.8
42emb|CR456684.10| Zebrafish DNA sequence from clone DKEY-46I8 in ... 40 9.8
43gb|DQ023454.1| Uranomys ruddi recombination activating protein 1... 40 9.8
44dbj|AP006415.1| Lotus japonicus genomic DNA, chromosome 6, clone... 40 9.8 
>dbj|AK058226.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-H07, full
           insert sequence
          Length = 847

 Score =  240 bits (121), Expect = 5e-60
 Identities = 273/323 (84%), Gaps = 3/323 (0%)
 Strand = Plus / Minus

                                                                       
Query: 391 actcagtagcttcccattggaggcatcccgtatgctggcattggaccgggacccatcgga 450
           |||||||||||||||||||||||| |||| ||||||||||| || || ||||||||||||
Sbjct: 371 actcagtagcttcccattggaggcgtcccatatgctggcataggtccaggacccatcgga 312

                                                                       
Query: 451 ggcatacccatcccgcccattggcggcatgcccattccgcccatcggaggtggcggaccg 510
           ||||| ||||| |||||||| || |||||||||      ||||| || ||||| ||||||
Sbjct: 311 ggcatccccattccgcccatcggaggcatgcccggcatccccattggcggtggaggaccg 252

                                                                       
Query: 511 cccatcataccaggcggagcaggcaaggccagaggaagcaattgagcgtacatgttctgc 570
           ||   ||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 251 cc---cataccaggaggagcaggcaaggcaagaggaagcaattgggcatacatgttctgc 195

                                                                       
Query: 571 tgcgcaactagttccttctcttcgttatctttagctttctcttccttctgcgattctatc 630
           || ||||| || || || ||||| || ||||||||  |  |||| ||||| ||||| |||
Sbjct: 194 tgagcaacaagatctttttcttccttctctttagcccttacttcattctgtgattcaatc 135

                                                                       
Query: 631 ctgtccttcaccaaatcatctaccttgcttgtgtactcacggatgaactgtaatagatag 690
           ||||||||||| |  ||||| ||||||||||||||||| || ||||||||||| ||||||
Sbjct: 134 ctgtccttcactagctcatcaaccttgcttgtgtactcccgaatgaactgtaacagatag 75

                                  
Query: 691 gggaacgcgaaatccagcatgtt 713
           ||||| || || |||| ||||||
Sbjct: 74  gggaatgcaaagtccaccatgtt 52



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 90/103 (87%), Gaps = 3/103 (2%)
 Strand = Plus / Minus

                                                                       
Query: 144 ctcatcctatccgaccgtaatatatata-atatagcatcctgtaattaactcaaactcgg 202
           |||||||||||| | ||||| ||| ||| |||||||| || | ||||||||| | || ||
Sbjct: 576 ctcatcctatcccatcgtaacata-atatatatagcaaccagcaattaactcgacct-gg 519

                                                      
Query: 203 ctagagatttcgcttgccaaaattgtcctggtaccaaaagaat 245
           ||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 518 ctagagatttcactcgccaaaattgtcctggtaccaaaagaat 476



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 62  aagtgtacatgcagaatgtctacaaacttt 91
           ||||||||||||| ||||||||||| ||||
Sbjct: 674 aagtgtacatgcaaaatgtctacaagcttt 645
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score =  170 bits (86), Expect = 4e-39
 Identities = 157/180 (87%), Gaps = 3/180 (1%)
 Strand = Plus / Minus

                                                                          
Query: 391    actcagtagcttcccattggaggcatcccgtatgctggcattggaccgggacccatcgga 450
              ||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 243006 actcagtagcttcccattggaggcatcccatatgctggcataggtccgggacccatcgga 242947

                                                                          
Query: 451    ggcatacccatcccgcccattggcggcatgcccattccgcccatcggaggtggcggaccg 510
              ||||| ||||| |||||||| || |||||||||      ||||| || ||||| ||||||
Sbjct: 242946 ggcatccccattccgcccatcggaggcatgcccggcatccccattggcggtggaggaccg 242887

                                                                          
Query: 511    cccatcataccaggcggagcaggcaaggccagaggaagcaattgagcgtacatgttctgc 570
              ||   ||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 242886 cc---cataccaggtggagcaggcaaggcgagaggaagcaattgggcatacatgttctgc 242830



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 43/45 (95%)
 Strand = Plus / Minus

                                                           
Query: 201    ggctagagatttcgcttgccaaaattgtcctggtaccaaaagaat 245
              ||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 243157 ggctagagatttcactcgccaaaattgtcctggtaccaaaagaat 243113



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                          
Query: 611    cttccttctgcgattctatcctgtccttcaccaaatcatctaccttgcttgtgtactcac 670
              |||| ||||| ||||| |||||||||||||| |  ||||| ||||||||||||||||| |
Sbjct: 242696 cttcattctgtgattcaatcctgtccttcactagctcatcaaccttgcttgtgtactccc 242637

                        
Query: 671    ggatgaactg 680
              | ||||||||
Sbjct: 242636 gaatgaactg 242627



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 62     aagtgtacatgcagaatgtctacaaacttt 91
              ||||||||||||| ||||||||||| ||||
Sbjct: 243309 aagtgtacatgcaaaatgtctacaagcttt 243280
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  170 bits (86), Expect = 4e-39
 Identities = 157/180 (87%), Gaps = 3/180 (1%)
 Strand = Plus / Minus

                                                                          
Query: 391    actcagtagcttcccattggaggcatcccgtatgctggcattggaccgggacccatcgga 450
              ||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 243006 actcagtagcttcccattggaggcatcccatatgctggcataggtccgggacccatcgga 242947

                                                                          
Query: 451    ggcatacccatcccgcccattggcggcatgcccattccgcccatcggaggtggcggaccg 510
              ||||| ||||| |||||||| || |||||||||      ||||| || ||||| ||||||
Sbjct: 242946 ggcatccccattccgcccatcggaggcatgcccggcatccccattggcggtggaggaccg 242887

                                                                          
Query: 511    cccatcataccaggcggagcaggcaaggccagaggaagcaattgagcgtacatgttctgc 570
              ||   ||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 242886 cc---cataccaggtggagcaggcaaggcgagaggaagcaattgggcatacatgttctgc 242830



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 43/45 (95%)
 Strand = Plus / Minus

                                                           
Query: 201    ggctagagatttcgcttgccaaaattgtcctggtaccaaaagaat 245
              ||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 243157 ggctagagatttcactcgccaaaattgtcctggtaccaaaagaat 243113



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                          
Query: 611    cttccttctgcgattctatcctgtccttcaccaaatcatctaccttgcttgtgtactcac 670
              |||| ||||| ||||| |||||||||||||| |  ||||| ||||||||||||||||| |
Sbjct: 242696 cttcattctgtgattcaatcctgtccttcactagctcatcaaccttgcttgtgtactccc 242637

                        
Query: 671    ggatgaactg 680
              | ||||||||
Sbjct: 242636 gaatgaactg 242627



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 62     aagtgtacatgcagaatgtctacaaacttt 91
              ||||||||||||| ||||||||||| ||||
Sbjct: 243309 aagtgtacatgcaaaatgtctacaagcttt 243280
to top
>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from
             chromosome 11 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 160673

 Score =  170 bits (86), Expect = 4e-39
 Identities = 157/180 (87%), Gaps = 3/180 (1%)
 Strand = Plus / Plus

                                                                         
Query: 391   actcagtagcttcccattggaggcatcccgtatgctggcattggaccgggacccatcgga 450
             ||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 61987 actcagtagcttcccattggaggcatcccatatgctggcataggtccgggacccatcgga 62046

                                                                         
Query: 451   ggcatacccatcccgcccattggcggcatgcccattccgcccatcggaggtggcggaccg 510
             ||||| ||||| |||||||| || |||||||||      ||||| || ||||| ||||||
Sbjct: 62047 ggcatccccattccgcccatcggaggcatgcccggcatccccattggcggtggaggaccg 62106

                                                                         
Query: 511   cccatcataccaggcggagcaggcaaggccagaggaagcaattgagcgtacatgttctgc 570
             ||   ||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 62107 cc---cataccaggtggagcaggcaaggcgagaggaagcaattgggcatacatgttctgc 62163



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 43/45 (95%)
 Strand = Plus / Plus

                                                          
Query: 201   ggctagagatttcgcttgccaaaattgtcctggtaccaaaagaat 245
             ||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 61836 ggctagagatttcactcgccaaaattgtcctggtaccaaaagaat 61880



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                         
Query: 611   cttccttctgcgattctatcctgtccttcaccaaatcatctaccttgcttgtgtactcac 670
             |||| ||||| ||||| |||||||||||||| |  ||||| ||||||||||||||||| |
Sbjct: 62297 cttcattctgtgattcaatcctgtccttcactagctcatcaaccttgcttgtgtactccc 62356

                       
Query: 671   ggatgaactg 680
             | ||||||||
Sbjct: 62357 gaatgaactg 62366



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 62    aagtgtacatgcagaatgtctacaaacttt 91
             ||||||||||||| ||||||||||| ||||
Sbjct: 61684 aagtgtacatgcaaaatgtctacaagcttt 61713
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score =  163 bits (82), Expect = 1e-36
 Identities = 156/180 (86%), Gaps = 3/180 (1%)
 Strand = Plus / Minus

                                                                          
Query: 391    actcagtagcttcccattggaggcatcccgtatgctggcattggaccgggacccatcgga 450
              ||||||||||||||||||||||||||||| ||||||||||| || || ||||||||||||
Sbjct: 258397 actcagtagcttcccattggaggcatcccatatgctggcataggtccaggacccatcgga 258338

                                                                          
Query: 451    ggcatacccatcccgcccattggcggcatgcccattccgcccatcggaggtggcggaccg 510
              ||||| ||||| |||||||| || |||||||||      ||||| || ||||| ||||||
Sbjct: 258337 ggcatccccattccgcccatcggaggcatgcccggcatccccattggcggtggaggaccg 258278

                                                                          
Query: 511    cccatcataccaggcggagcaggcaaggccagaggaagcaattgagcgtacatgttctgc 570
              ||   ||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 258277 cc---cataccaggaggagcaggcaaggcaagaggaagcaattgggcatacatgttctgc 258221



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 90/103 (87%), Gaps = 3/103 (2%)
 Strand = Plus / Minus

                                                                          
Query: 144    ctcatcctatccgaccgtaatatatata-atatagcatcctgtaattaactcaaactcgg 202
              |||||||||||| | ||||| ||| ||| |||||||| || | ||||||||| | || ||
Sbjct: 258602 ctcatcctatcccatcgtaacata-atatatatagcaaccagcaattaactcgacct-gg 258545

                                                         
Query: 203    ctagagatttcgcttgccaaaattgtcctggtaccaaaagaat 245
              ||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 258544 ctagagatttcactcgccaaaattgtcctggtaccaaaagaat 258502



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                          
Query: 611    cttccttctgcgattctatcctgtccttcaccaaatcatctaccttgcttgtgtactcac 670
              |||| ||||| ||||| |||||||||||||| |  ||||| ||||||||||||||||| |
Sbjct: 258090 cttcattctgtgattcaatcctgtccttcactagctcatcaaccttgcttgtgtactccc 258031

                        
Query: 671    ggatgaactg 680
              | ||||||||
Sbjct: 258030 gaatgaactg 258021



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 62     aagtgtacatgcagaatgtctacaaacttt 91
              ||||||||||||| ||||||||||| ||||
Sbjct: 258700 aagtgtacatgcaaaatgtctacaagcttt 258671
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  163 bits (82), Expect = 1e-36
 Identities = 156/180 (86%), Gaps = 3/180 (1%)
 Strand = Plus / Minus

                                                                          
Query: 391    actcagtagcttcccattggaggcatcccgtatgctggcattggaccgggacccatcgga 450
              ||||||||||||||||||||||||||||| ||||||||||| || || ||||||||||||
Sbjct: 258397 actcagtagcttcccattggaggcatcccatatgctggcataggtccaggacccatcgga 258338

                                                                          
Query: 451    ggcatacccatcccgcccattggcggcatgcccattccgcccatcggaggtggcggaccg 510
              ||||| ||||| |||||||| || |||||||||      ||||| || ||||| ||||||
Sbjct: 258337 ggcatccccattccgcccatcggaggcatgcccggcatccccattggcggtggaggaccg 258278

                                                                          
Query: 511    cccatcataccaggcggagcaggcaaggccagaggaagcaattgagcgtacatgttctgc 570
              ||   ||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 258277 cc---cataccaggaggagcaggcaaggcaagaggaagcaattgggcatacatgttctgc 258221



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 90/103 (87%), Gaps = 3/103 (2%)
 Strand = Plus / Minus

                                                                          
Query: 144    ctcatcctatccgaccgtaatatatata-atatagcatcctgtaattaactcaaactcgg 202
              |||||||||||| | ||||| ||| ||| |||||||| || | ||||||||| | || ||
Sbjct: 258602 ctcatcctatcccatcgtaacata-atatatatagcaaccagcaattaactcgacct-gg 258545

                                                         
Query: 203    ctagagatttcgcttgccaaaattgtcctggtaccaaaagaat 245
              ||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 258544 ctagagatttcactcgccaaaattgtcctggtaccaaaagaat 258502



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                          
Query: 611    cttccttctgcgattctatcctgtccttcaccaaatcatctaccttgcttgtgtactcac 670
              |||| ||||| ||||| |||||||||||||| |  ||||| ||||||||||||||||| |
Sbjct: 258090 cttcattctgtgattcaatcctgtccttcactagctcatcaaccttgcttgtgtactccc 258031

                        
Query: 671    ggatgaactg 680
              | ||||||||
Sbjct: 258030 gaatgaactg 258021



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 62     aagtgtacatgcagaatgtctacaaacttt 91
              ||||||||||||| ||||||||||| ||||
Sbjct: 258700 aagtgtacatgcaaaatgtctacaagcttt 258671
to top
>emb|BX000491.1|CNS08CDH Oryza sativa chromosome 12, . BAC OSJNBb0068K19 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 96667

 Score =  163 bits (82), Expect = 1e-36
 Identities = 156/180 (86%), Gaps = 3/180 (1%)
 Strand = Plus / Plus

                                                                         
Query: 391   actcagtagcttcccattggaggcatcccgtatgctggcattggaccgggacccatcgga 450
             ||||||||||||||||||||||||||||| ||||||||||| || || ||||||||||||
Sbjct: 16859 actcagtagcttcccattggaggcatcccatatgctggcataggtccaggacccatcgga 16918

                                                                         
Query: 451   ggcatacccatcccgcccattggcggcatgcccattccgcccatcggaggtggcggaccg 510
             ||||| ||||| |||||||| || |||||||||      ||||| || ||||| ||||||
Sbjct: 16919 ggcatccccattccgcccatcggaggcatgcccggcatccccattggcggtggaggaccg 16978

                                                                         
Query: 511   cccatcataccaggcggagcaggcaaggccagaggaagcaattgagcgtacatgttctgc 570
             ||   ||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 16979 cc---cataccaggaggagcaggcaaggcaagaggaagcaattgggcatacatgttctgc 17035



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 90/103 (87%), Gaps = 3/103 (2%)
 Strand = Plus / Plus

                                                                         
Query: 144   ctcatcctatccgaccgtaatatatata-atatagcatcctgtaattaactcaaactcgg 202
             |||||||||||| | ||||| ||| ||| |||||||| || | ||||||||| | || ||
Sbjct: 16654 ctcatcctatcccatcgtaacata-atatatatagcaaccagcaattaactcgacct-gg 16711

                                                        
Query: 203   ctagagatttcgcttgccaaaattgtcctggtaccaaaagaat 245
             ||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 16712 ctagagatttcactcgccaaaattgtcctggtaccaaaagaat 16754



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                         
Query: 611   cttccttctgcgattctatcctgtccttcaccaaatcatctaccttgcttgtgtactcac 670
             |||| ||||| ||||| |||||||||||||| |  ||||| ||||||||||||||||| |
Sbjct: 17166 cttcattctgtgattcaatcctgtccttcactagctcatcaaccttgcttgtgtactccc 17225

                       
Query: 671   ggatgaactg 680
             | ||||||||
Sbjct: 17226 gaatgaactg 17235



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 62    aagtgtacatgcagaatgtctacaaacttt 91
             ||||||||||||| ||||||||||| ||||
Sbjct: 16556 aagtgtacatgcaaaatgtctacaagcttt 16585
to top
>gb|BT018302.1| Zea mays clone EL01T0206E01.c mRNA sequence
          Length = 1090

 Score =  111 bits (56), Expect = 3e-21
 Identities = 204/251 (81%), Gaps = 3/251 (1%)
 Strand = Plus / Minus

                                                                       
Query: 466 cccattggcggcatgcccattccgcccatcggaggtggcggaccgcccatcatac-ca-- 522
           ||||| || ||||||||||||||||||||||||||||| || || |||||   |  ||  
Sbjct: 772 cccatcggaggcatgcccattccgcccatcggaggtggagggccacccatgccaggcatt 713

                                                                       
Query: 523 ggcggagcaggcaaggccagaggaagcaattgagcgtacatgttctgctgcgcaactagt 582
           ||||| || ||||| || ||||||||||  || || |||||||||||||| || || || 
Sbjct: 712 ggcggggcgggcaaagcgagaggaagcagctgtgcatacatgttctgctgagccacaagg 653

                                                                       
Query: 583 tccttctcttcgttatctttagctttctcttccttctgcgattctatcctgtccttcacc 642
           || ||||| || || ||||| ||| | |||||||||||||| || ||| |||||||||| 
Sbjct: 652 tctttctcctccttctctttggctctttcttccttctgcgactcaatcttgtccttcact 593

                                                                       
Query: 643 aaatcatctaccttgcttgtgtactcacggatgaactgtaatagataggggaacgcgaaa 702
           |||||||| |||||||| ||||| ||||| |||||||| || || || ||||| || || 
Sbjct: 592 aaatcatccaccttgctagtgtattcacgaatgaactgcaacaggtacgggaaggcaaag 533

                      
Query: 703 tccagcatgtt 713
           |||| ||||||
Sbjct: 532 tccatcatgtt 522



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 65/78 (83%)
 Strand = Plus / Minus

                                                                       
Query: 393 tcagtagcttcccattggaggcatcccgtatgctggcattggaccgggacccatcggagg 452
           ||||||||||||||| || ||||||||  |||||||||| ||      ||||||||||||
Sbjct: 821 tcagtagcttcccatcggtggcatcccaaatgctggcatcggcggcatacccatcggagg 762

                             
Query: 453 catacccatcccgcccat 470
           ||| ||||| ||||||||
Sbjct: 761 catgcccattccgcccat 744
to top
>gb|BT016858.1| Zea mays clone Contig691 mRNA sequence
          Length = 1598

 Score =  111 bits (56), Expect = 3e-21
 Identities = 204/251 (81%), Gaps = 3/251 (1%)
 Strand = Plus / Minus

                                                                        
Query: 466  cccattggcggcatgcccattccgcccatcggaggtggcggaccgcccatcatac-ca-- 522
            ||||| || ||||||||||||||||||||||||||||| || || |||||   |  ||  
Sbjct: 1290 cccatcggaggcatgcccattccgcccatcggaggtggagggccacccatgccaggcatt 1231

                                                                        
Query: 523  ggcggagcaggcaaggccagaggaagcaattgagcgtacatgttctgctgcgcaactagt 582
            ||||| || ||||| || ||||||||||  || || |||||||||||||| || || || 
Sbjct: 1230 ggcggggcgggcaaagcgagaggaagcagctgtgcatacatgttctgctgagccacaagg 1171

                                                                        
Query: 583  tccttctcttcgttatctttagctttctcttccttctgcgattctatcctgtccttcacc 642
            || ||||| || || ||||| ||| | |||||||||||||| || ||| |||||||||| 
Sbjct: 1170 tctttctcctccttctctttggctctttcttccttctgcgactcaatcttgtccttcact 1111

                                                                        
Query: 643  aaatcatctaccttgcttgtgtactcacggatgaactgtaatagataggggaacgcgaaa 702
            |||||||| |||||||| ||||| ||||| |||||||| || || || ||||| || || 
Sbjct: 1110 aaatcatccaccttgctagtgtattcacgaatgaactgcaacaggtacgggaaggcaaag 1051

                       
Query: 703  tccagcatgtt 713
            |||| ||||||
Sbjct: 1050 tccatcatgtt 1040



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 65/78 (83%)
 Strand = Plus / Minus

                                                                        
Query: 393  tcagtagcttcccattggaggcatcccgtatgctggcattggaccgggacccatcggagg 452
            ||||||||||||||| || ||||||||  |||||||||| ||      ||||||||||||
Sbjct: 1339 tcagtagcttcccatcggtggcatcccaaatgctggcatcggcggcatacccatcggagg 1280

                              
Query: 453  catacccatcccgcccat 470
            ||| ||||| ||||||||
Sbjct: 1279 catgcccattccgcccat 1262
to top
>gb|AY103752.1| Zea mays PCO092520 mRNA sequence
          Length = 1767

 Score =  111 bits (56), Expect = 3e-21
 Identities = 204/251 (81%), Gaps = 3/251 (1%)
 Strand = Plus / Minus

                                                                        
Query: 466  cccattggcggcatgcccattccgcccatcggaggtggcggaccgcccatcatac-ca-- 522
            ||||| || ||||||||||||||||||||||||||||| || || |||||   |  ||  
Sbjct: 1384 cccatcggaggcatgcccattccgcccatcggaggtggagggccacccatgccaggcatt 1325

                                                                        
Query: 523  ggcggagcaggcaaggccagaggaagcaattgagcgtacatgttctgctgcgcaactagt 582
            ||||| || ||||| || ||||||||||  || || |||||||||||||| || || || 
Sbjct: 1324 ggcggggcgggcaaagcgagaggaagcagctgtgcatacatgttctgctgagccacaagg 1265

                                                                        
Query: 583  tccttctcttcgttatctttagctttctcttccttctgcgattctatcctgtccttcacc 642
            || ||||| || || ||||| ||| | |||||||||||||| || ||| |||||||||| 
Sbjct: 1264 tctttctcctccttctctttggctctttcttccttctgcgactcaatcttgtccttcact 1205

                                                                        
Query: 643  aaatcatctaccttgcttgtgtactcacggatgaactgtaatagataggggaacgcgaaa 702
            |||||||| |||||||| ||||| ||||| |||||||| || || || ||||| || || 
Sbjct: 1204 aaatcatccaccttgctagtgtattcacgaatgaactgcaacaggtacgggaaggcaaag 1145

                       
Query: 703  tccagcatgtt 713
            |||| ||||||
Sbjct: 1144 tccatcatgtt 1134



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 65/78 (83%)
 Strand = Plus / Minus

                                                                        
Query: 393  tcagtagcttcccattggaggcatcccgtatgctggcattggaccgggacccatcggagg 452
            ||||||||||||||| || ||||||||  |||||||||| ||      ||||||||||||
Sbjct: 1433 tcagtagcttcccatcggtggcatcccaaatgctggcatcggcggcatacccatcggagg 1374

                              
Query: 453  catacccatcccgcccat 470
            ||| ||||| ||||||||
Sbjct: 1373 catgcccattccgcccat 1356
to top
>gb|U42608.1|GMU42608 Glycine max clathrin heavy chain mRNA, complete cds
          Length = 5537

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 129/158 (81%)
 Strand = Plus / Minus

                                                                        
Query: 523  ggcggagcaggcaaggccagaggaagcaattgagcgtacatgttctgctgcgcaactagt 582
            ||||| |||||||| || ||||| | ||| ||||| ||||| ||||| || |||| || |
Sbjct: 5099 ggcggtgcaggcaaagcaagaggcaacaactgagcatacatattctgttgagcaattact 5040

                                                                        
Query: 583  tccttctcttcgttatctttagctttctcttccttctgcgattctatcctgtccttcacc 642
            ||||||||||| |  |||||||||||| |||  ||||||| ||||||  | |||||||||
Sbjct: 5039 tccttctcttcttgctctttagctttcacttggttctgcgcttctattttatccttcacc 4980

                                                  
Query: 643  aaatcatctaccttgcttgtgtactcacggatgaactg 680
            |  ||||| || ||||  |||||||||||||| |||||
Sbjct: 4979 agttcatcaactttgccagtgtactcacggataaactg 4942
to top
>dbj|AK058259.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-E12, full
           insert sequence
          Length = 321

 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 90/103 (87%), Gaps = 3/103 (2%)
 Strand = Plus / Minus

                                                                       
Query: 144 ctcatcctatccgaccgtaatatatata-atatagcatcctgtaattaactcaaactcgg 202
           |||||||||||| | ||||| ||| ||| |||||||| || | ||||||||| | || ||
Sbjct: 129 ctcatcctatcccatcgtaacata-atatatatagcaaccagcaattaactcgacct-gg 72

                                                      
Query: 203 ctagagatttcgcttgccaaaattgtcctggtaccaaaagaat 245
           ||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 71  ctagagatttcactcgccaaaattgtcctggtaccaaaagaat 29



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 62  aagtgtacatgcagaatgtctacaaacttt 91
           ||||||||||||| ||||||||||| ||||
Sbjct: 227 aagtgtacatgcaaaatgtctacaagcttt 198
to top
>gb|AY960125.1| Medicago truncatula geranylgeranyl reductase mRNA, complete cds
          Length = 2242

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                        
Query: 529  gcaggcaaggccagaggaagcaattgagcgtacatgttctgctgcgcaactagttccttc 588
            |||||||| || ||||| | ||||||||| |||||||||||||| |||||||  ||||| 
Sbjct: 1764 gcaggcaaagcaagaggtaacaattgagcatacatgttctgctgtgcaactacgtccttt 1705

                            
Query: 589  tcttcgttatctttag 604
            ||||| || |||||||
Sbjct: 1704 tcttctttctctttag 1689
to top
>dbj|AP004467.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT06K11, TM0002,
             complete sequence
          Length = 106023

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 79/97 (81%)
 Strand = Plus / Minus

                                                                         
Query: 583   tccttctcttcgttatctttagctttctcttccttctgcgattctatcctgtccttcacc 642
             ||||| ||||| || |||||||| ||||||||  | || | ||| ||  |||||||||||
Sbjct: 22384 tccttttcttctttctctttagccttctcttcgatttgtgcttcaattttgtccttcacc 22325

                                                  
Query: 643   aaatcatctaccttgcttgtgtactcacggatgaact 679
             || ||||| || ||||  |||||||||||||| ||||
Sbjct: 22324 aattcatcaactttgccagtgtactcacggataaact 22288



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 529   gcaggcaaggccagaggaagcaattgagcgtacatgttctgc 570
             |||||||| || ||||| | ||||||||| ||||||||||||
Sbjct: 22629 gcaggcaaagcaagaggcaacaattgagcatacatgttctgc 22588
to top
>emb|AL389887.7| Human DNA sequence from clone RP11-54F22 on chromosome Xq21.1-21.31
             Contains the 5' end of the RPS6KA6 gene for ribosomal
             protein S6 kinase (90kD) polypeptide 6 and a CpG island,
             complete sequence
          Length = 143220

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 582   ttccttctcttcgttatctttag 604
             |||||||||||||||||||||||
Sbjct: 34948 ttccttctcttcgttatctttag 34926
to top
>emb|BX601644.6| Zebrafish DNA sequence from clone DKEY-21O13 in linkage group 9,
             complete sequence
          Length = 217065

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 159   cgtaatatatataatatagcatc 181
             |||||||||||||||||||||||
Sbjct: 50545 cgtaatatatataatatagcatc 50523
to top
>gb|AC144729.29| Medicago truncatula clone mth2-15j6, complete sequence
          Length = 113550

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 529   gcaggcaaggccagaggaagcaattgagcgtacatgttctgc 570
             |||||||| || ||||| | ||||||||| ||||||||||||
Sbjct: 22100 gcaggcaaagcaagaggtaacaattgagcatacatgttctgc 22059
to top
>gb|AC142498.21| Medicago truncatula clone mth2-24a18, complete sequence
          Length = 114956

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 90/113 (79%)
 Strand = Plus / Minus

                                                                         
Query: 567   ctgctgcgcaactagttccttctcttcgttatctttagctttctcttccttctgcgattc 626
             |||||| |||| || |||||||||||| |  |||||||| ||| |||| ||||| |||||
Sbjct: 65677 ctgctgtgcaattacttccttctcttcttgttctttagccttcacttcattctgggattc 65618

                                                                  
Query: 627   tatcctgtccttcaccaaatcatctaccttgcttgtgtactcacggatgaact 679
              ||  ||| ||| || |  ||||| || ||||  |||||||||||||| ||||
Sbjct: 65617 aattttgtgcttaacaagttcatcaactttgccagtgtactcacggataaact 65565
to top
>gb|AC006058.1| Homo sapiens 3p22-7 PAC RPCI4-555D20 (Roswell Park Cancer Institute Human
              PAC Library) complete sequence
          Length = 147146

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 308    ttctcatgatttcctccctcc 328
              |||||||||||||||||||||
Sbjct: 104363 ttctcatgatttcctccctcc 104343
to top
>gb|AC092624.2| Homo sapiens BAC clone RP11-261J9 from 2, complete sequence
          Length = 101158

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 160   gtaatatatataatatagcat 180
             |||||||||||||||||||||
Sbjct: 92775 gtaatatatataatatagcat 92795
to top
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 475    ggcatgcccattccgcccatc 495
              |||||||||||||||||||||
Sbjct: 430846 ggcatgcccattccgcccatc 430866



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                           
Query: 450    aggcatacccatcccgcccattggcggcatgcccattccgcccat 494
              |||||| ||||| ||||||||    ||||||||||||||||||||
Sbjct: 430845 aggcatgcccattccgcccatcccaggcatgcccattccgcccat 430889
to top
>emb|CT573029.5| M.truncatula DNA sequence from clone MTH2-67H11 on chromosome 3,
             complete sequence
          Length = 152399

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 90/113 (79%)
 Strand = Plus / Plus

                                                                         
Query: 567   ctgctgcgcaactagttccttctcttcgttatctttagctttctcttccttctgcgattc 626
             |||||| |||| || |||||||||||| |  |||||||| ||| |||| ||||| |||||
Sbjct: 44700 ctgctgtgcaattacttccttctcttcttgttctttagccttcacttcattctgggattc 44759

                                                                  
Query: 627   tatcctgtccttcaccaaatcatctaccttgcttgtgtactcacggatgaact 679
              ||  ||| ||| || |  ||||| || ||||  |||||||||||||| ||||
Sbjct: 44760 aattttgtgcttaacaagttcatcaactttgccagtgtactcacggataaact 44812
to top
>emb|AL512414.2|CNS07EFC Human chromosome 14 DNA sequence BAC R-663F5 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 158357

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 530   caggcaaggccagaggaagca 550
             |||||||||||||||||||||
Sbjct: 71536 caggcaaggccagaggaagca 71516
to top
>gb|DQ396371.1| HIV-1 isolate 03ZAPS155MB1 from South Africa, complete genome
          Length = 9008

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 255  aacacaaccaatgacgcaga 274
            ||||||||||||||||||||
Sbjct: 6810 aacacaaccaatgacgcaga 6829
to top
>gb|AC115073.9| Mus musculus chromosome 8, clone RP24-417J18, complete sequence
          Length = 161625

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 161    taatatatataatatagcat 180
              ||||||||||||||||||||
Sbjct: 118061 taatatatataatatagcat 118042
to top
>emb|CT009510.7| Mouse DNA sequence from clone RP23-47H16 on chromosome 14, complete
             sequence
          Length = 209623

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 606   tttctcttccttctgcgatt 625
             ||||||||||||||||||||
Sbjct: 80757 tttctcttccttctgcgatt 80776
to top
>gb|AC013285.10| Homo sapiens chromosome 10 clone RP11-143D9, complete sequence
          Length = 202500

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 582    ttccttctcttcgttatctt 601
              ||||||||||||||||||||
Sbjct: 182676 ttccttctcttcgttatctt 182657
to top
>gb|AY142078.1| Borrelia burgdorferi strain Sh-2-82 plasmid cp18-1 Erp43 protein
           (erp43) gene, complete cds
          Length = 1199

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 595 ttatctttagctttctcttc 614
           ||||||||||||||||||||
Sbjct: 574 ttatctttagctttctcttc 555
to top
>emb|CR855994.1| Wallaby DNA sequence from clone MEKBa-69G12, complete sequence
          Length = 174698

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 337    tgagatatttcacatcatct 356
              ||||||||||||||||||||
Sbjct: 163435 tgagatatttcacatcatct 163454
to top
>emb|CR457441.5| Zebrafish DNA sequence from clone CH211-181D7 in linkage group 15,
              complete sequence
          Length = 135398

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 239    aaagaatattaactggaaca 258
              ||||||||||||||||||||
Sbjct: 101522 aaagaatattaactggaaca 101503
to top
>emb|BX572091.1| Prochlorococcus marinus MED4 complete genome; segment 2/5
          Length = 349082

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 451   ggcatacccatcccgcccattggcggcatgcccattccgcccat 494
             ||||||||||| |||||||||   ||||| |||||||| |||||
Sbjct: 80901 ggcatacccatgccgcccattcctggcatacccattccacccat 80944



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 451   ggcatacccatcccgcccattggcggcatgcccattccgcccat 494
             ||||||||||| |||||||||   ||||| ||||| ||||||||
Sbjct: 80877 ggcatacccatgccgcccattcctggcatacccatgccgcccat 80920
to top
>emb|BX649546.11| Zebrafish DNA sequence from clone DKEY-27C18 in linkage group 3,
             complete sequence
          Length = 124731

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 295   tctctgggatacattctcat 314
             ||||||||||||||||||||
Sbjct: 11920 tctctgggatacattctcat 11901
to top
>gb|AC024603.7| Homo sapiens chromosome 10 clone RP11-325D15, complete sequence
          Length = 129243

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 582   ttccttctcttcgttatctt 601
             ||||||||||||||||||||
Sbjct: 40713 ttccttctcttcgttatctt 40732
to top
>gb|AC182810.1| Gasterosteus aculeatus clone VMRC28-119K03, complete sequence
          Length = 131913

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 92   caatataacacctatacaaa 111
            ||||||||||||||||||||
Sbjct: 1186 caatataacacctatacaaa 1167
to top
>gb|AC097475.2| Homo sapiens BAC clone RP11-95J1 from 4, complete sequence
          Length = 136159

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 75     gaatgtctacaaactttcaa 94
              ||||||||||||||||||||
Sbjct: 100323 gaatgtctacaaactttcaa 100304
to top
>gb|AC092169.4| Homo sapiens BAC clone RP11-791I11 from 2, complete sequence
          Length = 192927

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 228    tcctggtaccaaaagaatat 247
              ||||||||||||||||||||
Sbjct: 117476 tcctggtaccaaaagaatat 117457
to top
>gb|AC013440.7| Homo sapiens BAC clone RP11-292A20 from 2, complete sequence
          Length = 158548

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 228   tcctggtaccaaaagaatat 247
             ||||||||||||||||||||
Sbjct: 93315 tcctggtaccaaaagaatat 93296
to top
>ref|XM_318677.2| Anopheles gambiae str. PEST ENSANGP00000004639 (ENSANGG00000003636),
            partial mRNA
          Length = 3264

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 496  ggaggtggcggaccgcccat 515
            ||||||||||||||||||||
Sbjct: 1694 ggaggtggcggaccgcccat 1675
to top
>emb|AL391158.5|CNS06C83 Human chromosome 14 DNA sequence BAC R-560O13 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 202792

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 605   ctttctcttccttctgcgattcta 628
             ||||||||||||||||| ||||||
Sbjct: 76030 ctttctcttccttctgctattcta 76053
to top
>gb|AF077603.1|AF077603 Borrelia burgdorferi strain 297 plasmid-encoded ElpA2 protein (elpA2)
            gene, complete cds; and unknown genes
          Length = 3468

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 595  ttatctttagctttctcttc 614
            ||||||||||||||||||||
Sbjct: 1628 ttatctttagctttctcttc 1609
to top
>emb|AL935160.11| Zebrafish DNA sequence from clone CH211-184C7 in linkage group 12,
             complete sequence
          Length = 140401

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 476   gcatgcccattccgcccatc 495
             ||||||||||||||||||||
Sbjct: 32624 gcatgcccattccgcccatc 32605
to top
>emb|CR456684.10| Zebrafish DNA sequence from clone DKEY-46I8 in linkage group 12, complete
              sequence
          Length = 262809

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 476    gcatgcccattccgcccatc 495
              ||||||||||||||||||||
Sbjct: 198560 gcatgcccattccgcccatc 198579
to top
>gb|DQ023454.1| Uranomys ruddi recombination activating protein 1 (Rag1) gene,
            partial cds
          Length = 2983

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 525  cggagcaggcaaggccagag 544
            ||||||||||||||||||||
Sbjct: 1522 cggagcaggcaaggccagag 1503
to top
>dbj|AP006415.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT37I11, TM0302a,
             complete sequence
          Length = 96704

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 74/92 (80%)
 Strand = Plus / Plus

                                                                         
Query: 582   ttccttctcttcgttatctttagctttctcttccttctgcgattctatcctgtccttcac 641
             |||||||||||| |  |||||||| ||| |||| ||||| | ||| ||  ||||||||||
Sbjct: 33878 ttccttctcttcttgttctttagccttcacttctttctgtgcttcaattttgtccttcac 33937

                                             
Query: 642   caaatcatctaccttgcttgtgtactcacgga 673
             ||  ||||| || ||||  |||||||| ||||
Sbjct: 33938 cagttcatcaactttgccagtgtactcgcgga 33969


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,525,943
Number of Sequences: 3902068
Number of extensions: 6525943
Number of successful extensions: 164883
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 164509
Number of HSP's gapped (non-prelim): 365
length of query: 718
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 695
effective length of database: 17,143,297,704
effective search space: 11914591904280
effective search space used: 11914591904280
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top