ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd27k17 |
|---|---|
| Clone Library Name | barley_pub |
>ETFB_MOUSE (Q9DCW4) Electron transfer flavoprotein beta-subunit (Beta-ETF)| Length = 254 Score = 190 bits (483), Expect = 2e-48 Identities = 99/175 (56%), Positives = 123/175 (70%) Frame = -2 Query: 601 ADRAVHVXXXXXXXXXXXXXAVAKILRALALQESPGLLILGKQAIDDDCNQTGQMLAALL 422 ADR +HV VA++L LA +E LL LGKQAIDDDCNQTGQM A LL Sbjct: 82 ADRGIHVEIPGAQAESLGPLQVARVLAKLAEKEKVDLLFLGKQAIDDDCNQTGQMTAGLL 141 Query: 421 NWPQGTFASKVIIDKDKQKATVEREVDGGTETICLDLPAVITTDLRLNQPRYATLPNIMK 242 +WPQGTFAS+V ++ DK K VERE+DGG ET+ L LPAV+T DLRLN+PRYATLPNIMK Sbjct: 142 DWPQGTFASQVTLEGDKVK--VEREIDGGLETLRLKLPAVVTADLRLNEPRYATLPNIMK 199 Query: 241 AKSKVIKKVTPADLNVDVRSDMEVLRVDEPPKRKAGVILSSVDELLDKLKNEARV 77 AK K I+ V DL VD+ S + V+ V+EPP+R AGV + + ++L+ KLK R+ Sbjct: 200 AKKKKIEVVKAGDLGVDLTSKVSVISVEEPPQRSAGVKVETTEDLVAKLKEVGRI 254
>ETFB_RAT (Q68FU3) Electron transfer flavoprotein beta-subunit (Beta-ETF)| Length = 254 Score = 189 bits (481), Expect = 4e-48 Identities = 99/175 (56%), Positives = 123/175 (70%) Frame = -2 Query: 601 ADRAVHVXXXXXXXXXXXXXAVAKILRALALQESPGLLILGKQAIDDDCNQTGQMLAALL 422 ADR +HV VA++L LA +E LL LGKQAIDDDCNQTGQM A LL Sbjct: 82 ADRGIHVEVPGAEAENLGPLQVARVLAKLAEKEKVDLLFLGKQAIDDDCNQTGQMTAGLL 141 Query: 421 NWPQGTFASKVIIDKDKQKATVEREVDGGTETICLDLPAVITTDLRLNQPRYATLPNIMK 242 +WPQGTFAS+V ++ DK K VERE+DGG ETI L LPAV+T DLRLN+PRYATLPNIMK Sbjct: 142 DWPQGTFASQVTLEGDKVK--VEREIDGGLETIRLKLPAVVTADLRLNEPRYATLPNIMK 199 Query: 241 AKSKVIKKVTPADLNVDVRSDMEVLRVDEPPKRKAGVILSSVDELLDKLKNEARV 77 AK K I+ + DL VD+ S + V+ V+EPP+R AGV + + ++L+ KLK R+ Sbjct: 200 AKKKKIEVIKAGDLGVDLTSKVSVISVEEPPQRLAGVKVETTEDLVAKLKEVGRI 254
>ETFB_PONPY (Q5RFK0) Electron transfer flavoprotein beta-subunit (Beta-ETF)| Length = 254 Score = 189 bits (479), Expect = 7e-48 Identities = 96/175 (54%), Positives = 124/175 (70%) Frame = -2 Query: 601 ADRAVHVXXXXXXXXXXXXXAVAKILRALALQESPGLLILGKQAIDDDCNQTGQMLAALL 422 ADR +HV VA++L LA +E L++LGKQAIDDDCNQTGQM A L Sbjct: 82 ADRGIHVEVPPAEAERLGPLQVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFL 141 Query: 421 NWPQGTFASKVIIDKDKQKATVEREVDGGTETICLDLPAVITTDLRLNQPRYATLPNIMK 242 +WPQGTFAS+V ++ DK K VERE+DGG ET+ L LPAV+T DLRLN+PRYATLPNIMK Sbjct: 142 DWPQGTFASQVTLEGDKLK--VEREIDGGLETLRLKLPAVVTADLRLNEPRYATLPNIMK 199 Query: 241 AKSKVIKKVTPADLNVDVRSDMEVLRVDEPPKRKAGVILSSVDELLDKLKNEARV 77 AK K I+ + P DL VD+ S + V+ V++PP+R AGV + + ++L+ KLK R+ Sbjct: 200 AKKKKIEVIKPGDLGVDLTSKLSVISVEDPPQRTAGVKVETTEDLVAKLKEIGRI 254
>ETFB_HUMAN (P38117) Electron transfer flavoprotein beta-subunit (Beta-ETF)| Length = 254 Score = 189 bits (479), Expect = 7e-48 Identities = 96/175 (54%), Positives = 124/175 (70%) Frame = -2 Query: 601 ADRAVHVXXXXXXXXXXXXXAVAKILRALALQESPGLLILGKQAIDDDCNQTGQMLAALL 422 ADR +HV VA++L LA +E L++LGKQAIDDDCNQTGQM A L Sbjct: 82 ADRGIHVEVPPAEAERLGPLQVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFL 141 Query: 421 NWPQGTFASKVIIDKDKQKATVEREVDGGTETICLDLPAVITTDLRLNQPRYATLPNIMK 242 +WPQGTFAS+V ++ DK K VERE+DGG ET+ L LPAV+T DLRLN+PRYATLPNIMK Sbjct: 142 DWPQGTFASQVTLEGDKLK--VEREIDGGLETLRLKLPAVVTADLRLNEPRYATLPNIMK 199 Query: 241 AKSKVIKKVTPADLNVDVRSDMEVLRVDEPPKRKAGVILSSVDELLDKLKNEARV 77 AK K I+ + P DL VD+ S + V+ V++PP+R AGV + + ++L+ KLK R+ Sbjct: 200 AKKKKIEVIKPGDLGVDLTSKLSVISVEDPPQRTAGVKVETTEDLVAKLKEIGRI 254
>ETFB_BOVIN (Q2TBV3) Electron transfer flavoprotein beta-subunit (Beta-ETF)| Length = 254 Score = 186 bits (472), Expect = 4e-47 Identities = 95/175 (54%), Positives = 123/175 (70%) Frame = -2 Query: 601 ADRAVHVXXXXXXXXXXXXXAVAKILRALALQESPGLLILGKQAIDDDCNQTGQMLAALL 422 ADR +HV VA++L LA +E L++LGKQAIDDDCNQTGQM A L Sbjct: 82 ADRGIHVEVPAAEANHLGPLQVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFL 141 Query: 421 NWPQGTFASKVIIDKDKQKATVEREVDGGTETICLDLPAVITTDLRLNQPRYATLPNIMK 242 +WPQGTFAS+V ++ DK K VERE+DGG ET+ L LPAV+T DLRLN+PRYATLPNIMK Sbjct: 142 DWPQGTFASQVTLEGDKIK--VEREIDGGLETLRLKLPAVVTADLRLNEPRYATLPNIMK 199 Query: 241 AKSKVIKKVTPADLNVDVRSDMEVLRVDEPPKRKAGVILSSVDELLDKLKNEARV 77 AK K I+ + DL VD+ S + V+ V++PP+R AGV + + ++L+ KLK R+ Sbjct: 200 AKKKKIEVIKAGDLGVDLTSKLSVISVEDPPQRTAGVKVETTEDLVAKLKEIGRI 254
>ETFB_PIG (Q6UAQ8) Electron transfer flavoprotein beta subunit| Length = 254 Score = 185 bits (469), Expect = 1e-46 Identities = 94/175 (53%), Positives = 123/175 (70%) Frame = -2 Query: 601 ADRAVHVXXXXXXXXXXXXXAVAKILRALALQESPGLLILGKQAIDDDCNQTGQMLAALL 422 ADR +HV VA++L LA +E L++LGKQAIDDDCNQTGQM A L Sbjct: 82 ADRGIHVEVPAAEAHHLGPLQVARVLAKLAQKEKVDLVLLGKQAIDDDCNQTGQMTAGFL 141 Query: 421 NWPQGTFASKVIIDKDKQKATVEREVDGGTETICLDLPAVITTDLRLNQPRYATLPNIMK 242 +WPQGTFAS+V ++ DK K VERE+DGG ET+ L LPAV+T DLRLN+PRYATLPNIMK Sbjct: 142 DWPQGTFASQVTLEGDKVK--VEREIDGGLETLRLKLPAVVTADLRLNEPRYATLPNIMK 199 Query: 241 AKSKVIKKVTPADLNVDVRSDMEVLRVDEPPKRKAGVILSSVDELLDKLKNEARV 77 AK K I+ + DL VD+ S + V+ V++PP+R AGV + + ++L+ KL+ R+ Sbjct: 200 AKKKKIEVIKAGDLGVDLTSKLSVVSVEDPPQRVAGVKVETTEDLVAKLREIGRI 254
>ETFB_BRAJA (P53575) Electron transfer flavoprotein beta-subunit (Beta-ETF)| (Electron transfer flavoprotein small subunit) (ETFSS) Length = 249 Score = 182 bits (462), Expect = 6e-46 Identities = 98/155 (63%), Positives = 117/155 (75%) Frame = -2 Query: 538 VAKILRALALQESPGLLILGKQAIDDDCNQTGQMLAALLNWPQGTFASKVIIDKDKQKAT 359 VAKIL+ +A +E PGL+ILGKQAIDDD NQTGQMLAALL W Q TFASK+ ++ K T Sbjct: 97 VAKILKKVAEEEQPGLIILGKQAIDDDSNQTGQMLAALLGWSQATFASKLEVEGSDFKVT 156 Query: 358 VEREVDGGTETICLDLPAVITTDLRLNQPRYATLPNIMKAKSKVIKKVTPADLNVDVRSD 179 REVDGG +T+ L PA++TTDLRLN+PRYA+LPNIMKAK K I + T AD VDV + Sbjct: 157 --REVDGGLQTVKLKGPAIVTTDLRLNEPRYASLPNIMKAKKKPIAEKTVADYGVDVTAR 214 Query: 178 MEVLRVDEPPKRKAGVILSSVDELLDKLKNEARVL 74 +EVL+ EP RKAGV + V EL+ KLKNEA VL Sbjct: 215 LEVLKTTEPAGRKAGVKVKDVAELVSKLKNEAGVL 249
>ETFB_PARDE (P38975) Electron transfer flavoprotein beta-subunit (Beta-ETF)| (Electron transfer flavoprotein small subunit) (ETFSS) Length = 252 Score = 173 bits (439), Expect = 3e-43 Identities = 101/176 (57%), Positives = 120/176 (68%) Frame = -2 Query: 601 ADRAVHVXXXXXXXXXXXXXAVAKILRALALQESPGLLILGKQAIDDDCNQTGQMLAALL 422 ADRA+ V AVAKIL A+A E L+I GKQAID+D N TGQMLAA+L Sbjct: 80 ADRAILVVAADDVQQDIEPLAVAKILAAVARAEGTELIIAGKQAIDNDMNATGQMLAAIL 139 Query: 421 NWPQGTFASKVIIDKDKQKATVEREVDGGTETICLDLPAVITTDLRLNQPRYATLPNIMK 242 W Q TFASKV I+ K K T REVDGG +TI + LPAV+T DLRLN+PRYA+LPNIMK Sbjct: 140 GWAQATFASKVEIEGAKAKVT--REVDGGLQTIAVSLPAVVTADLRLNEPRYASLPNIMK 197 Query: 241 AKSKVIKKVTPADLNVDVRSDMEVLRVDEPPKRKAGVILSSVDELLDKLKNEARVL 74 AK K + + T AD VDV +EV+ V EP RKAG+ + SVDEL+ KLK EA V+ Sbjct: 198 AKKKPLDEKTAADYGVDVAPRLEVVSVREPEGRKAGIKVGSVDELVGKLK-EAGVI 252
>ETFB_SCHPO (Q9UTH2) Probable electron transfer flavoprotein beta-subunit| (Beta-ETF) Length = 254 Score = 147 bits (370), Expect = 3e-35 Identities = 75/149 (50%), Positives = 104/149 (69%) Frame = -2 Query: 538 VAKILRALALQESPGLLILGKQAIDDDCNQTGQMLAALLNWPQGTFASKVIIDKDKQKAT 359 VAK+L+A +E L++LGKQAIDDD +QTG MLAA+L WPQ T ASKV I+ DK Sbjct: 103 VAKLLKATVEKEKSNLVLLGKQAIDDDAHQTGGMLAAMLGWPQFTSASKVRIEGDK--VI 160 Query: 358 VEREVDGGTETICLDLPAVITTDLRLNQPRYATLPNIMKAKSKVIKKVTPADLNVDVRSD 179 V RE+DGG ET+ LPA+ITTDLRLN PR+A L +MKA+ + K++P DL V + Sbjct: 161 VTREIDGGEETLSSTLPAIITTDLRLNVPRFANLAKVMKARKAPLGKMSPEDLGVTIDQR 220 Query: 178 MEVLRVDEPPKRKAGVILSSVDELLDKLK 92 ++ + V EP +++ +++ SVDE++ LK Sbjct: 221 LQTVSVSEPVQKRQNIMVKSVDEMVKTLK 249
>ETFB_YEAST (P42940) Probable electron transfer flavoprotein beta-subunit| (Beta-ETF) Length = 261 Score = 146 bits (368), Expect = 5e-35 Identities = 77/151 (50%), Positives = 104/151 (68%), Gaps = 2/151 (1%) Frame = -2 Query: 538 VAKILRALALQESPGLLILGKQAIDDDCNQTGQMLAALLNWPQGTFASKVIIDKDKQKAT 359 +AKIL+A+ ++ L+++GKQAIDDDCN TGQMLA LLNWPQ T A+KV D + Sbjct: 107 IAKILKAVVEKKGSNLVLMGKQAIDDDCNNTGQMLAGLLNWPQATNAAKVEF-LDNGRVQ 165 Query: 358 VEREVDGGTETICLDLPAVITTDLRLNQPRYATLPNIMKAKSKVIKKVTPAD--LNVDVR 185 V RE+D G E I LP VITTDLRLN PRY LP +MKAK K I+K+ A +++ Sbjct: 166 VTREIDDGEEVIEASLPMVITTDLRLNTPRYVGLPKLMKAKKKPIEKLDIAKDFPEINIE 225 Query: 184 SDMEVLRVDEPPKRKAGVILSSVDELLDKLK 92 ++++ ++EP + GV L+SVDEL++KLK Sbjct: 226 PQLKIVSMEEPKTKSPGVKLNSVDELIEKLK 256
>ETFB_METME (P53570) Electron transfer flavoprotein beta-subunit (Beta-ETF)| (Electron transfer flavoprotein small subunit) (ETFSS) Length = 264 Score = 80.9 bits (198), Expect = 3e-15 Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 7/176 (3%) Frame = -2 Query: 601 ADRAVHVXXXXXXXXXXXXXAVAKILRALALQESPGLLILGKQAIDDDCNQTGQMLAALL 422 ADRAV V V +IL + +E+P ++ G Q+ D TG +A+ L Sbjct: 81 ADRAVRVWDDAAEGSDAIV--VGRILTEVIKKEAPDMVFAGVQSSDQAYASTGISVASYL 138 Query: 421 NWPQGTFASKVIIDKDKQKATVEREVDGG-TETICLDLPAVITTDLRLNQPRYATLPNIM 245 NWP + + KA + RE++GG + + ++ PAV+T L +N+PRYA+L I Sbjct: 139 NWPHAAVVADLQYKPGDNKAVIRRELEGGMLQEVEINCPAVLTIQLGINKPRYASLRGIK 198 Query: 244 KAKSKVIKKVTPADLNVD------VRSDMEVLRVDEPPKRKAGVILSSVDELLDKL 95 +A +K I++V+ AD+ + +S V R+ P K +A +I ++ E K+ Sbjct: 199 QAATKPIEEVSLADIGLSANDVGAAQSMSRVRRMYIPEKGRATMIEGTISEQAAKI 254
>ETFB_BACSU (P94550) Electron transfer flavoprotein beta-subunit (Beta-ETF)| (Electron transfer flavoprotein small subunit) (ETFSS) Length = 257 Score = 80.1 bits (196), Expect = 5e-15 Identities = 55/163 (33%), Positives = 88/163 (53%), Gaps = 8/163 (4%) Frame = -2 Query: 538 VAKILRALALQESPGLLILGKQAIDDDCNQTGQMLAALLNWPQGTFASKVIIDKDKQKAT 359 ++++L + L++ G AID Q LA LL+ P T +K+ I+ +A Sbjct: 97 ISQVLYHYMKDQEFDLILGGNVAIDGGSGQVAPRLAELLDIPCITTITKLEINGTDAEA- 155 Query: 358 VEREVDGGTETICLDLPAVITTDLRLNQPRYATLPNIMKAKSKVIKKVTPADLNVDVRSD 179 ER+V+G E I LP ++T LN+PRY +LP IMKAK K ++++ DL++D Sbjct: 156 -ERDVEGDVEKIKTTLPLLVTAQQGLNEPRYPSLPGIMKAKKKPLEELELDDLDLDEEDA 214 Query: 178 MEVLRVDE---PPKRKAGVIL-----SSVDELLDKLKNEARVL 74 L+ E PPK++AG +L EL+ L++EA+V+ Sbjct: 215 EPKLKTIERFLPPKKEAGKLLQGEPAEQAKELVSLLRSEAKVI 257
>ETFB_MEGEL (O85691) Electron transfer flavoprotein beta-subunit (Beta-ETF)| (Electron transfer flavoprotein small subunit) (ETFSS) Length = 270 Score = 70.9 bits (172), Expect = 3e-12 Identities = 51/165 (30%), Positives = 84/165 (50%), Gaps = 17/165 (10%) Frame = -2 Query: 538 VAKILRALALQ---ESPGLLILGKQAIDDDCNQTGQMLAALLNWPQGTFASKVIIDKDKQ 368 +A+ ++ LA E +++ GKQAID D Q G +A L PQ T+A + ++ D Sbjct: 102 LAQAIKKLAADKGIEQFDIILCGKQAIDGDTAQVGPQIACELGIPQITYARDIKVEGD-- 159 Query: 367 KATVEREVDGGTETICLDLPAVITTDLRLNQPRYATLPNIMKAKSKVIKKVTPADLNVD- 191 K TV++E + G P +IT LN+PR+ T+ MKAK + I + A + D Sbjct: 160 KVTVQQENEEGYIVTEAQFPVLITAVKDLNEPRFPTIRGTMKAKRREIPNLDAAAVAADD 219 Query: 190 -----VRSDMEVLRVDEPPKRKAGVIL--------SSVDELLDKL 95 S +V ++ PP+R G++L + VD++++KL Sbjct: 220 AQIGLSGSPTKVRKIFTPPQRSGGLVLKVEDDNEQAIVDQVMEKL 264
>ETFB_CLOTS (P97089) Electron transfer flavoprotein beta-subunit (Beta-ETF)| (Electron transfer flavoprotein small subunit) (ETFSS) Length = 260 Score = 67.8 bits (164), Expect = 2e-11 Identities = 49/147 (33%), Positives = 74/147 (50%), Gaps = 12/147 (8%) Frame = -2 Query: 493 LLILGKQAIDDDCNQTGQMLAALLNWPQGTFASKVIIDKDKQKATVEREVDGGTETICLD 314 ++ G+QAID D Q G +A L+ PQ T+ KV I+ DK VER ++ G E I + Sbjct: 112 IVFCGRQAIDGDTAQVGPQIAEQLDIPQVTYVRKVEIEGDK--LIVERALEDGYEIIEVK 169 Query: 313 LPAVITTDLRLNQPRYATLPNIMKA-KSKVIKKVTPADLNVDVR------SDMEVLRVDE 155 P ++T LN PRY ++ I A K +K +T DL VD S +V+ Sbjct: 170 TPVLLTAIKELNVPRYPSIKGIFNAYNKKEVKILTADDLEVDKNELGLKGSPTKVVATST 229 Query: 154 PPKRKAGVILS-----SVDELLDKLKN 89 P +AG I + +V L+++L + Sbjct: 230 PNTERAGEIFTGNIKEAVQNLVERLNS 256
>ETFB_MYCTU (P64097) Electron transfer flavoprotein beta-subunit (Beta-ETF)| (Electron transfer flavoprotein small subunit) (ETFSS) Length = 266 Score = 65.1 bits (157), Expect = 2e-10 Identities = 46/137 (33%), Positives = 68/137 (49%) Frame = -2 Query: 601 ADRAVHVXXXXXXXXXXXXXAVAKILRALALQESPGLLILGKQAIDDDCNQTGQMLAALL 422 AD+AVH+ A + RAL E L+I G ++ D ++A L Sbjct: 85 ADKAVHLKDDGMHGSDVIQTGWA-LARALGTIEGTELVIAGNESTDGVGGAVPAIIAEYL 143 Query: 421 NWPQGTFASKVIIDKDKQKATVEREVDGGTETICLDLPAVITTDLRLNQPRYATLPNIMK 242 PQ T KV I+ K T ERE D G T+ LPAVI+ + ++N+PR+ + IM Sbjct: 144 GLPQLTHLRKVSIEGGK--ITGERETDEGVFTLEATLPAVISVNEKINEPRFPSFKGIMA 201 Query: 241 AKSKVIKKVTPADLNVD 191 AK K + +T A++ V+ Sbjct: 202 AKKKEVTVLTLAEIGVE 218
>ETFB_MYCBO (P64098) Electron transfer flavoprotein beta-subunit (Beta-ETF)| (Electron transfer flavoprotein small subunit) (ETFSS) Length = 266 Score = 65.1 bits (157), Expect = 2e-10 Identities = 46/137 (33%), Positives = 68/137 (49%) Frame = -2 Query: 601 ADRAVHVXXXXXXXXXXXXXAVAKILRALALQESPGLLILGKQAIDDDCNQTGQMLAALL 422 AD+AVH+ A + RAL E L+I G ++ D ++A L Sbjct: 85 ADKAVHLKDDGMHGSDVIQTGWA-LARALGTIEGTELVIAGNESTDGVGGAVPAIIAEYL 143 Query: 421 NWPQGTFASKVIIDKDKQKATVEREVDGGTETICLDLPAVITTDLRLNQPRYATLPNIMK 242 PQ T KV I+ K T ERE D G T+ LPAVI+ + ++N+PR+ + IM Sbjct: 144 GLPQLTHLRKVSIEGGK--ITGERETDEGVFTLEATLPAVISVNEKINEPRFPSFKGIMA 201 Query: 241 AKSKVIKKVTPADLNVD 191 AK K + +T A++ V+ Sbjct: 202 AKKKEVTVLTLAEIGVE 218
>ETFB_MYCLE (O33095) Electron transfer flavoprotein beta-subunit (Beta-ETF)| (Electron transfer flavoprotein small subunit) (ETFSS) Length = 266 Score = 62.0 bits (149), Expect = 1e-09 Identities = 43/138 (31%), Positives = 68/138 (49%) Frame = -2 Query: 601 ADRAVHVXXXXXXXXXXXXXAVAKILRALALQESPGLLILGKQAIDDDCNQTGQMLAALL 422 AD+AVH+ A + RAL E L+I G ++ D ++A L Sbjct: 85 ADKAVHLKDDGMHGSDVIQTGWA-LARALGTIEGTELVIAGNESTDGVGGVVPAIIAEYL 143 Query: 421 NWPQGTFASKVIIDKDKQKATVEREVDGGTETICLDLPAVITTDLRLNQPRYATLPNIMK 242 PQ T + ++ K T ERE D G T+ LPAV++ + ++N+PR+ + IM Sbjct: 144 GLPQLTHLRTISVEGGK--ITGERETDEGVFTLEAVLPAVVSVNEKINEPRFPSFKGIMA 201 Query: 241 AKSKVIKKVTPADLNVDV 188 AK K + +T A++ V+V Sbjct: 202 AKKKEVTVLTLAEIGVEV 219
>ETFB_CLOAB (P52040) Electron transfer flavoprotein beta-subunit (Beta-ETF)| (Electron transfer flavoprotein small subunit) (ETFSS) Length = 259 Score = 61.6 bits (148), Expect = 2e-09 Identities = 41/137 (29%), Positives = 69/137 (50%) Frame = -2 Query: 493 LLILGKQAIDDDCNQTGQMLAALLNWPQGTFASKVIIDKDKQKATVEREVDGGTETICLD 314 ++ G+QAID D Q G +A L PQ T+ KV +D D K + + + G E + + Sbjct: 112 IVFAGRQAIDGDTAQVGPEIAEHLGIPQVTYVEKVEVDGDTLK--IRKAWEDGYEVVEVK 169 Query: 313 LPAVITTDLRLNQPRYATLPNIMKAKSKVIKKVTPADLNVDVRSDMEVLRVDEPPKRKAG 134 P ++T LN PRY ++ I A K +K T D++VD ++++ + K+ + Sbjct: 170 TPVLLTAIKELNVPRYMSVEKIFGAFDKEVKMWTADDIDVD-KANLGLKGSPTKVKKSST 228 Query: 133 VILSSVDELLDKLKNEA 83 + E++DK EA Sbjct: 229 KEVKGQGEVIDKPVKEA 245
>FIXA_RHILP (Q05559) Protein fixA| Length = 279 Score = 60.8 bits (146), Expect = 3e-09 Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 8/140 (5%) Frame = -2 Query: 538 VAKILRALALQESPGLLILGKQAIDDDCNQTGQMLAALLNWPQGTFASKVI-IDKDKQKA 362 +AKI A +P ++ KQ ID D Q G +A L+ Q T+ +K++ +D + ++ Sbjct: 103 IAKIGEAFG---TPDIVFTAKQTIDGDTAQVGPGIAKRLDLLQLTYVAKIVSVDINGREI 159 Query: 361 TVEREVDGGTETICLDLPAVITTDLRLNQPRYATLPNIMKAKSKVIKKVTPADLNVD--- 191 TVER +GGT+T+ LP +IT N+ R +L + ++A I K AD ++ Sbjct: 160 TVERRSEGGTQTLMSKLPCLITMLEGTNEIRRGSLDDALRAARSQIVKWNAADAGIEDLT 219 Query: 190 ----VRSDMEVLRVDEPPKR 143 S V RV PP+R Sbjct: 220 KCGLRGSPTVVKRVFAPPER 239
>FIXA_ECOL6 (Q8FLA3) Protein fixA| Length = 256 Score = 58.9 bits (141), Expect = 1e-08 Identities = 38/132 (28%), Positives = 65/132 (49%) Frame = -2 Query: 535 AKILRALALQESPGLLILGKQAIDDDCNQTGQMLAALLNWPQGTFASKVIIDKDKQKATV 356 A +L A A + L++ G + D Q G ++ +LN P SK II TV Sbjct: 101 ASVLAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSK-IISLTADTLTV 159 Query: 355 EREVDGGTETICLDLPAVITTDLRLNQPRYATLPNIMKAKSKVIKKVTPADLNVDVRSDM 176 ERE++ TET+ + LPAV+ +N P+ ++ I+ A K ++ + AD+ + + Sbjct: 160 ERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAAW 219 Query: 175 EVLRVDEPPKRK 140 +V P +R+ Sbjct: 220 SEQQVAAPKQRE 231
>FIXA_RHISN (Q53210) Protein fixA| Length = 285 Score = 58.2 bits (139), Expect = 2e-08 Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 9/148 (6%) Frame = -2 Query: 502 SPGLLILGKQAIDDDCNQTGQMLAALLNWPQGTFASKVI-IDKDKQKATVEREVDGGTET 326 SP ++ GKQ ID D Q G +A L+ Q T+ +KV ID + TVER +GGT Sbjct: 114 SPDIVFTGKQTIDGDTAQVGPGIAKRLDLVQLTYVAKVTSIDLRTRAITVERRAEGGTHV 173 Query: 325 ICLDLPAVITTDLRLNQPRYATLPNIMKAKSKVIKKVTPADLNVD-------VRSDMEVL 167 + +LP +IT N R +L + ++A I K + ++ S V Sbjct: 174 LKSELPCLITMLEGSNAIRRGSLDDALRAARSEIVKWNAVEAGIEDITKCGLRGSPTVVK 233 Query: 166 RVDEP-PKRKAGVILSSVDELLDKLKNE 86 RV P P+ + V + +V++ + + NE Sbjct: 234 RVFAPTPREQKAVQIDTVEKAMQDVANE 261
>FIXA_SALTY (Q8ZRX0) Protein fixA| Length = 256 Score = 57.4 bits (137), Expect = 3e-08 Identities = 40/132 (30%), Positives = 64/132 (48%) Frame = -2 Query: 535 AKILRALALQESPGLLILGKQAIDDDCNQTGQMLAALLNWPQGTFASKVIIDKDKQKATV 356 A L A A + LLI G + D Q G ++ LN P SK++ D TV Sbjct: 101 ATALAAAAQKSGFDLLICGDGSSDLYAQQVGLLVGEALNIPAINGVSKILSLTDST-LTV 159 Query: 355 EREVDGGTETICLDLPAVITTDLRLNQPRYATLPNIMKAKSKVIKKVTPADLNVDVRSDM 176 ERE++ ET+ + LPAVI +N P+ ++ I+ A K ++ +PAD+ ++ Sbjct: 160 ERELEDEVETLSIPLPAVIAVSTDINTPQIPSMKAILGAAKKPVQVWSPADIGLNSVPAY 219 Query: 175 EVLRVDEPPKRK 140 +V P +R+ Sbjct: 220 SAQQVAAPKQRE 231
>FIXA_SALTI (Q8Z9L0) Protein fixA| Length = 256 Score = 57.4 bits (137), Expect = 3e-08 Identities = 40/132 (30%), Positives = 64/132 (48%) Frame = -2 Query: 535 AKILRALALQESPGLLILGKQAIDDDCNQTGQMLAALLNWPQGTFASKVIIDKDKQKATV 356 A L A A + LLI G + D Q G ++ LN P SK++ D TV Sbjct: 101 ATALAAAAQKSGFDLLICGDGSSDLYAQQVGLLVGEALNIPAINGVSKILSLTDST-LTV 159 Query: 355 EREVDGGTETICLDLPAVITTDLRLNQPRYATLPNIMKAKSKVIKKVTPADLNVDVRSDM 176 ERE++ ET+ + LPAVI +N P+ ++ I+ A K ++ +PAD+ ++ Sbjct: 160 ERELEDEVETLSIPLPAVIAVSTDINTPQIPSMKAILGAAKKPVQVWSPADIGLNSVPAY 219 Query: 175 EVLRVDEPPKRK 140 +V P +R+ Sbjct: 220 STQQVAAPKQRE 231
>FIXA_SALPA (Q5PIN4) Protein fixA| Length = 256 Score = 57.4 bits (137), Expect = 3e-08 Identities = 40/132 (30%), Positives = 64/132 (48%) Frame = -2 Query: 535 AKILRALALQESPGLLILGKQAIDDDCNQTGQMLAALLNWPQGTFASKVIIDKDKQKATV 356 A L A A + LLI G + D Q G ++ LN P SK++ D TV Sbjct: 101 ATALAAAAQKSGFDLLICGDGSSDLYAQQVGLLVGEALNIPAINGVSKILSLTDST-LTV 159 Query: 355 EREVDGGTETICLDLPAVITTDLRLNQPRYATLPNIMKAKSKVIKKVTPADLNVDVRSDM 176 ERE++ ET+ + LPAVI +N P+ ++ I+ A K ++ +PAD+ ++ Sbjct: 160 ERELEDEVETLSIPLPAVIAVSTDINTPQIPSMKAILGAAKKPVQVWSPADIGLNSVPAY 219 Query: 175 EVLRVDEPPKRK 140 +V P +R+ Sbjct: 220 STQQVAAPKQRE 231
>FIXA_ECOLI (P60566) Protein fixA| Length = 256 Score = 57.4 bits (137), Expect = 3e-08 Identities = 38/132 (28%), Positives = 64/132 (48%) Frame = -2 Query: 535 AKILRALALQESPGLLILGKQAIDDDCNQTGQMLAALLNWPQGTFASKVIIDKDKQKATV 356 A L A A + L++ G + D Q G ++ +LN P SK II TV Sbjct: 101 ASALAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSK-IISLTADTLTV 159 Query: 355 EREVDGGTETICLDLPAVITTDLRLNQPRYATLPNIMKAKSKVIKKVTPADLNVDVRSDM 176 ERE++ TET+ + LPAV+ +N P+ ++ I+ A K ++ + AD+ + + Sbjct: 160 ERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAAW 219 Query: 175 EVLRVDEPPKRK 140 +V P +R+ Sbjct: 220 SEQQVAAPKQRE 231
>FIXA_ECO57 (P60567) Protein fixA| Length = 256 Score = 57.4 bits (137), Expect = 3e-08 Identities = 38/132 (28%), Positives = 64/132 (48%) Frame = -2 Query: 535 AKILRALALQESPGLLILGKQAIDDDCNQTGQMLAALLNWPQGTFASKVIIDKDKQKATV 356 A L A A + L++ G + D Q G ++ +LN P SK II TV Sbjct: 101 ASALAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSK-IISLTADTLTV 159 Query: 355 EREVDGGTETICLDLPAVITTDLRLNQPRYATLPNIMKAKSKVIKKVTPADLNVDVRSDM 176 ERE++ TET+ + LPAV+ +N P+ ++ I+ A K ++ + AD+ + + Sbjct: 160 ERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAAW 219 Query: 175 EVLRVDEPPKRK 140 +V P +R+ Sbjct: 220 SEQQVAAPKQRE 231
>FIXA_SHIFL (P59673) Protein fixA| Length = 256 Score = 55.8 bits (133), Expect = 9e-08 Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 3/125 (2%) Frame = -2 Query: 535 AKILRALALQESPGLLILGKQAIDDDCNQTGQMLAALLNWPQGTFASKVIIDKDKQKATV 356 A L A A + L++ G + D Q G ++ +LN P SK II TV Sbjct: 101 ASALAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSK-IISLTADTLTV 159 Query: 355 EREVDGGTETICLDLPAVITTDLRLNQPRYATLPNIMKAKSKVIKKVTPADLN---VDVR 185 ERE++ TET+ + LPAV+ +N P+ ++ I+ A K ++ + AD+ VD Sbjct: 160 ERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAVDAW 219 Query: 184 SDMEV 170 S+ +V Sbjct: 220 SEQQV 224
>FIXA_AZOVI (P53576) Protein fixA| Length = 281 Score = 53.5 bits (127), Expect = 5e-07 Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 1/107 (0%) Frame = -2 Query: 538 VAKILRALALQESPGLLILGKQAIDDDCNQTGQMLAALLNWPQGTFASKVI-IDKDKQKA 362 ++ ++R + L+ GKQ ID D Q G +A L++ T+ S+++ +D K++ Sbjct: 101 LSAVIRKIMEDMPVDLIFTGKQTIDGDTAQVGPGIAKRLDYQLLTYVSRIVDVDTAKKEI 160 Query: 361 TVEREVDGGTETICLDLPAVITTDLRLNQPRYATLPNIMKAKSKVIK 221 VER +GG + + LP +IT N+ R+ L ++ +A +K Sbjct: 161 QVERRAEGGVQLLETSLPCLITMLEGTNEMRFGDLDDLFRAARHELK 207
>FIXA_RHIME (P09818) Protein fixA| Length = 292 Score = 52.4 bits (124), Expect = 1e-06 Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 1/104 (0%) Frame = -2 Query: 502 SPGLLILGKQAIDDDCNQTGQMLAALLNWPQGTFASKVI-IDKDKQKATVEREVDGGTET 326 +P ++ GKQ ID D Q G +A L+ Q T+ +K++ ID ++ TVER +GG++ Sbjct: 114 TPDVVFTGKQTIDGDTAQVGPGIAKRLDLQQLTYVAKILSIDAASREITVERRAEGGSQI 173 Query: 325 ICLDLPAVITTDLRLNQPRYATLPNIMKAKSKVIKKVTPADLNV 194 + LP ++T + R L + ++A + K + AD + Sbjct: 174 LRTGLPCLVTMLDGADAIRRGRLDDALRAARTKVVKWSAADAGI 217
>FIXA_AZOCA (P26482) Protein fixA| Length = 281 Score = 45.1 bits (105), Expect = 2e-04 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 1/89 (1%) Frame = -2 Query: 502 SPGLLILGKQAIDDDCNQTGQMLAALLNWPQGTFASKVI-IDKDKQKATVEREVDGGTET 326 +P ++ GKQ ID D Q G +A L Q T+ +K+ +D + VER +GG + Sbjct: 114 APDIVFTGKQTIDGDTAQVGPGIAKRLGLLQLTYVAKIANVDLAGRSIQVERRSEGGVQV 173 Query: 325 ICLDLPAVITTDLRLNQPRYATLPNIMKA 239 + LP +IT N+ R + + ++A Sbjct: 174 LQTRLPCLITMLEATNEIRRGAMADALRA 202
>YDIQ_ECOLI (P76201) Putative electron transfer flavoprotein subunit ydiQ| Length = 254 Score = 41.6 bits (96), Expect = 0.002 Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 7/155 (4%) Frame = -2 Query: 535 AKILRALALQESPGLLILGKQAIDDDCNQTGQMLAALLNWPQGTFASKVIIDKDKQKATV 356 AK L A + LLI G+ + D Q G ++ +L P S I + + Sbjct: 98 AKALAAAIEKIGFDLLIFGEGSGDLYAQQVGLLVGEILQLPVINAVSA--IQRQGNTLVI 155 Query: 355 EREVDGGTETICLDLPAVITTDLRLNQPRYATLPNIMKAKSKVIKKVTPADLNVDVRSDM 176 ER ++ E I L +PAV+ +N PR ++ I+ A K + + +D++ + + Sbjct: 156 ERTLEDDVEVIELSVPAVLCVTSDINVPRIPSMKAILGAGKKPVNQWQASDIDWSQSAPL 215 Query: 175 -EVLRVDEPPKRKAGVIL------SSVDELLDKLK 92 E++ + PP+ + I+ ++ EL + LK Sbjct: 216 AELVGIRVPPQTERKHIIIDNDSPEAIAELAEHLK 250
>TBB_YEAST (P02557) Tubulin beta chain (Beta tubulin)| Length = 457 Score = 35.0 bits (79), Expect = 0.17 Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 8/79 (10%) Frame = -2 Query: 397 SKVIIDKDKQKATVEREVDGGTETICLDLPA---VITTDLRLNQPRYATLPNIMKAKSKV 227 S +++ +V + V+ ET C+D A + L+LNQP Y L N++ S V Sbjct: 176 SDTVVEPYNATLSVHQLVEHSDETFCIDNEALYDICQRTLKLNQPSYGDLNNLV---SSV 232 Query: 226 IKKVT-----PADLNVDVR 185 + VT P LN D+R Sbjct: 233 MSGVTTSLRYPGQLNSDLR 251
>PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM 121 (Pore| membrane protein of 121 kDa) (P145) Length = 1229 Score = 31.2 bits (69), Expect = 2.4 Identities = 19/49 (38%), Positives = 23/49 (46%) Frame = +3 Query: 78 TRAXXXXXXXXXXTDERITPAFLFGGSSTRSTSMSDLTSTFRSAGVTFL 224 T A TD PAF FG +S S+S+S TST +A FL Sbjct: 792 TSAVAPITSASPSTDSASKPAFGFGINSVSSSSVSTTTSTATAASQPFL 840
>PSTB_NITEU (Q82VR4) Phosphate import ATP-binding protein pstB (EC 3.6.3.27)| (Phosphate-transporting ATPase) (ABC phosphate transporter) Length = 266 Score = 31.2 bits (69), Expect = 2.4 Identities = 13/41 (31%), Positives = 24/41 (58%) Frame = -2 Query: 184 SDMEVLRVDEPPKRKAGVILSSVDELLDKLKNEARVL*LVH 62 +D E+L DEP + +S++EL+ L+N+ +L + H Sbjct: 179 TDPEILLFDEPTSALDPIATASIEELISDLRNKVTILIVTH 219
>CTPI_MYCTU (Q10900) Probable cation-transporting ATPase I (EC 3.6.3.-)| Length = 1625 Score = 30.8 bits (68), Expect = 3.2 Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 8/56 (14%) Frame = -2 Query: 313 LPAVITTDLRLNQPRYATLPNIMKAKSKVI--------KKVTPADLNVDVRSDMEV 170 +PAV TT RL R+AT + AKS + +V PAD + V D+EV Sbjct: 836 VPAVATTRRRLEAARHATRTATVSAKSLRVGDVIDLAAPEVVPADARLLVAEDLEV 891
>Y209_ENCCU (Q8SWH3) Hypothetical protein ECU02_0090| Length = 258 Score = 30.0 bits (66), Expect = 5.4 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 9/72 (12%) Frame = +3 Query: 129 ITPAFLFGGSSTRSTSMSDLTSTFRSAGVTFLI---------TFDFAFIMFGSVAYRGWF 281 I P+F + STS +T++F + G+ L+ TF + YR +F Sbjct: 126 ILPSFFIPPTYLLSTSCDFITTSFTATGINILVDLMILLSYLTFLLLLLFLEKAEYRPYF 185 Query: 282 SLRSVVITAGKS 317 L S V+ KS Sbjct: 186 ILASFVLILVKS 197
>CTPI_MYCLE (O53114) Probable cation-transporting ATPase I (EC 3.6.3.-)| Length = 1609 Score = 29.6 bits (65), Expect = 7.0 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 8/56 (14%) Frame = -2 Query: 313 LPAVITTDLRLNQPRYATLPNIMKAKS--------KVIKKVTPADLNVDVRSDMEV 170 +PAV TT RL ++AT + AKS +V PAD V V D+EV Sbjct: 836 VPAVATTRRRLEAAQHATRTVTVSAKSLRAGDVIDLAAPEVVPADARVLVAEDLEV 891
>RL10_HALSA (Q9HSS4) 50S ribosomal protein L10e| Length = 176 Score = 29.6 bits (65), Expect = 7.0 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 4/38 (10%) Frame = -1 Query: 257 AKHNEGEVEGDQESNPCR----PERRCQVRHGGAPGGR 156 A+H G+++ D + P + P+ CQ+RHG R Sbjct: 32 AQHKMGDLQADADDYPVQISLVPQEECQLRHGSLEAAR 69
>PSTB1_HALSA (Q9HS13) Phosphate import ATP-binding protein pstB 1 (EC 3.6.3.27)| (Phosphate-transporting ATPase 1) (ABC phosphate transporter 1) Length = 281 Score = 29.6 bits (65), Expect = 7.0 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = -2 Query: 190 VRSDMEVLRVDEPPKRKAGVILSSVDELLDKLKNEARVL*LVH 62 + D EVL +DEP V S V++L+++L E V+ + H Sbjct: 191 IAPDPEVLLMDEPASALDPVATSQVEDLIEELAEEYTVVIVTH 233
>TOP2_CANGA (O93794) DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II)| Length = 1406 Score = 29.3 bits (64), Expect = 9.2 Identities = 17/42 (40%), Positives = 23/42 (54%) Frame = -2 Query: 226 IKKVTPADLNVDVRSDMEVLRVDEPPKRKAGVILSSVDELLD 101 + ++T D +V S + PPKRKA V+ SS DEL D Sbjct: 1308 LDQITSEDTSVK-ESSAPAAKKKAPPKRKAKVVESSEDELSD 1348 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,697,386 Number of Sequences: 219361 Number of extensions: 1377285 Number of successful extensions: 4203 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 4099 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4181 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5310515667 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
