Clone Name | rbasd27k02 |
---|---|
Clone Library Name | barley_pub |
>gb|BT009287.1| Triticum aestivum clone wlm0.pk0014.b1:fis, full insert mRNA sequence Length = 1486 Score = 1045 bits (527), Expect = 0.0 Identities = 655/696 (94%), Gaps = 12/696 (1%) Strand = Plus / Minus Query: 35 cagcaacaccatcaaactccaaaaggnnnnnnngaaatcgaatcacgtttctgagctagg 94 |||||||||||||||||||||||| | |||||||||||| |||||||||||| Sbjct: 1393 cagcaacaccatcaaactccaaaatgaa------aaatcgaatcacacttctgagctagg 1340 Query: 95 aacta--ggaagcatcggcaggggagggacaaacacaagatttacacgcgtagatagata 152 ||||| ||||||||||||||||||||||||||||||| ||| |||||||| || ||||| Sbjct: 1339 aactataggaagcatcggcaggggagggacaaacacaacattaacacgcgtcgacagata 1280 Query: 153 atagaggaatcttcagatctttgtggcgaaatcaaggccttccttggcgagcgcctccac 212 |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 1279 ---gaggaatcttcagatcttggtggcgaaatcaaggccttccttgccgagcgcctccac 1223 Query: 213 gtcggccaccggcggctgggccctggcgaccttggcgatggcctgattctcgtcggcgga 272 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1222 gtcggccaccggcggctgggccctggcgaccttggcgatggcctgattctcgtcggcgga 1163 Query: 273 gccgccctctaggaacacgccgatgaccttgccgtccttgacccagtaggtgccgaactt 332 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1162 gccgccctctaggaacacaccgatgaccttgccgtccttgacccagtaggtgccgaactt 1103 Query: 333 gggcttggccgcagctgggtcgttgtccccgaacagcaccgtctcgccaacgttgtcgcc 392 |||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1102 gggcttggccaccgctgggtcgttgtccccgaacagcaccgtctcgccaacgttctcgcc 1043 Query: 393 gtagaactgccacgcgacgtcgaacgacctagagtagaagtagggcaggtagtcgtactc 452 |||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||| Sbjct: 1042 gtagaactgccacgcgacatcgaacgacctcgaatagaagtagggcaggtagtcgtactc 983 Query: 453 cgccacggactcaccggactccttggccttgatagcctttactgcctgctcggccgattt 512 |||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 982 cgccacggactcgccggactccttggccttgatcgcctttactgcctgctcggctgattt 923 Query: 513 ccgagcatggtcgacgtgctccactctcctcggctcgtcgtacagcttcatggggaaagt 572 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 922 ccgagcatggtcgacgtgctccactctcctcggctcgttgtacagcttcatggggaaagt 863 Query: 573 cgccacatcaccgatggcatatacaccagcgacgcttgtttcgaagaatgcgtcagtctt 632 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 862 cgccacatcaccgatggcatatacaccagcgacgcttgtttcgaagaatgtgtcagtctt 803 Query: 633 gagtccacctttctcctcatcaacttggcctttgaagaggccttgtcagtggcctgccac 692 ||||||||| || ||||| ||||||||||||||||||||||| |||||| |||||||||| Sbjct: 802 gagtccacccttatcctcttcaacttggcctttgaagaggcc-tgtcagcggcctgccac 744 Query: 693 cgactncaacgatgaccatgtcggcatcgagtactc 728 ||||| |||||||||| ||||||||||||||||||| Sbjct: 743 cgactccaacgatgacgatgtcggcatcgagtactc 708
>gb|BT009096.1| Triticum aestivum clone wkm2c.pk005.g2:fis, full insert mRNA sequence Length = 933 Score = 1025 bits (517), Expect = 0.0 Identities = 604/630 (95%), Gaps = 5/630 (0%) Strand = Plus / Minus Query: 99 aggaagcatcggcaggggagggacaaacacaagatttacacgcgtagatagataatagag 158 ||||||||||||||||| |||||||||||||| |||||||||||| |||||||| ||| Sbjct: 789 aggaagcatcggcaggg-agggacaaacacaaaatttacacgcgtcgatagata---gag 734 Query: 159 gaatcttcagatctttgtggcgaaatcaaggccttccttggcgagcgcctccacgtcggc 218 ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 733 gaatcttcagatcttggtggcgaaatcaaggccttccttgccgagcgcctccacgtcgtc 674 Query: 219 caccggcggctgggccctggcgaccttggcgatggcctgattctcgtcggcggagccgcc 278 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 673 caccggcggctgggccctggcgaccttggcgatggcctgattctcgtcggcggagccgcc 614 Query: 279 ctctaggaacacgccgatgaccttgccgtccttgacccagtaggtgccgaacttgggctt 338 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 613 ctctaggaacacaccgatgaccttgccgtccttgacccagtaggtgccgaacttgggctt 554 Query: 339 ggccgcagctgggtcgttgtccccgaacagcaccgtctcgccaacgttgtcgccgtagaa 398 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 553 ggccgccgctgggtcgttgtccccgaacagcaccgtctcgccaacgttgtcgccgtagaa 494 Query: 399 ctgccacgcgacgtcgaacgacctagagtagaagtagggcaggtagtcgtactccgccac 458 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 493 ctgccacgcgacgtcgaacgacctggagtagaagtagggcaggtagtcgtactccgccac 434 Query: 459 ggactcaccggactccttggccttgatagcctttactgcctgctcggccgatttccgagc 518 ||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 433 agactcgccggactccttggccttgatcgcctttactgcctgctcggctgatttccgagc 374 Query: 519 atggtcgacgtgctccactctcctcggctcgtcgtacagcttcatggggaaagtcgccac 578 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 373 atggtcgacgtgctccactctcctcggctcgtcgtacagtttcatggggaaagtcgccac 314 Query: 579 atcaccgatggcatatacaccagcgacgcttgtttcgaagaatgcgtcagtcttgagtcc 638 |||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||| Sbjct: 313 atcaccgatggcatatacaccagcaacgcttgtttcgaagaatgtgtcggtcttgagtcc 254 Query: 639 acctttctcctcatcaacttggcctttgaagaggccttgtcagtggcctgccaccgactn 698 ||| |||||||| ||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 253 acccttctcctcttcaacttggcctttgaagaggcc-tgtcagcggcctgccaccgactc 195 Query: 699 caacgatgaccatgtcggcatcgagtactc 728 |||||||||| ||||||||||||||||||| Sbjct: 194 caacgatgacgatgtcggcatcgagtactc 165 Score = 48.1 bits (24), Expect = 0.041 Identities = 54/65 (83%), Gaps = 6/65 (9%) Strand = Plus / Minus Query: 35 cagcaacaccatcaaactccaaaaggnnnnnnngaaatcgaatcacgtttctgagctagg 94 |||||||||||||||||||||||| | |||||||||||| |||||||||||| Sbjct: 878 cagcaacaccatcaaactccaaaatgaa------aaatcgaatcacacttctgagctagg 825 Query: 95 aacta 99 ||||| Sbjct: 824 aacta 820
>gb|AY107597.1| Zea mays PCO071961 mRNA sequence Length = 1745 Score = 442 bits (223), Expect = e-121 Identities = 411/471 (87%), Gaps = 2/471 (0%) Strand = Plus / Minus Query: 202 agcgcctccacgtcggccaccggcggctgggccctggcgaccttggcgatggcctgattc 261 ||||||| |||||||||||||||||||| |||||||||||| ||||||||||||| ||| Sbjct: 1478 agcgcctggacgtcggccaccggcggctgcgccctggcgaccctggcgatggcctggttc 1419 Query: 262 tcgtcggcggagccgccctctaggaacacgccgatgaccttgccgtccttgacccagtag 321 || ||||| || |||||||| || |||||||||| ||||||||||||||| ||||||||| Sbjct: 1418 tcctcggccgacccgccctcgagaaacacgccgacgaccttgccgtccttcacccagtag 1359 Query: 322 gtgccgaacttgggcttggccgcagctgggtcgttgtccccgaacagcaccgtc-tcgcc 380 ||||||||||||||||||||| || ||||||||||| ||||||||||| ||| ||||| Sbjct: 1358 ctgccgaacttgggcttggccgaggccgggtcgttgtcgccgaacagcac-gtcgtcgcc 1300 Query: 381 aacgttgtcgccgtagaactgccacgcgacgtcgaacgacctagagtagaagtagggcag 440 |||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||| Sbjct: 1299 gacgttgtcgccgtagaactgccacgccaagtcgaacgaccgggagtagaagtagggcag 1240 Query: 441 gtagtcgtactccgccacggactcaccggactccttggccttgatagcctttactgcctg 500 ||||||||| || ||||| || || |||||||||||||||||||| ||| | || ||||| Sbjct: 1239 gtagtcgtattcggccaccgattcgccggactccttggccttgattgccctcacggcctg 1180 Query: 501 ctcggccgatttccgagcatggtcgacgtgctccactctcctcggctcgtcgtacagctt 560 |||||| || ||||| || ||||| |||||||| ||||||||| |||||| ||| ||||| Sbjct: 1179 ctcggcggacttccgggcgtggtccacgtgctcaactctcctctgctcgttgtagagctt 1120 Query: 561 catggggaaagtcgccacatcaccgatggcatatacaccagcgacgcttgtttcgaagaa 620 || ||||| || ||||| || ||||| || ||||| || || || |||||||||||||| Sbjct: 1119 cagagggaaggtggccacgtcgccgatcgcgtataccccggctacacttgtttcgaagaa 1060 Query: 621 tgcgtcagtcttgagtccacctttctcctcatcaacttggcctttgaagag 671 ||| || |||||||||||||||||||| ||| || |||||||| ||||||| Sbjct: 1059 tgcatcggtcttgagtccacctttctcgtcagcagcttggcctatgaagag 1009
>ref|XM_483751.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1721 Score = 420 bits (212), Expect = e-114 Identities = 423/492 (85%), Gaps = 1/492 (0%) Strand = Plus / Minus Query: 205 gcctccacgtcggccaccggcggctgggccctggcgaccttggcgatggcctgattctcg 264 ||||| |||||||||||||||||||| || |||||||||||||| ||| |||||||||| Sbjct: 1365 gcctcgacgtcggccaccggcggctgagctctggcgaccttggcaatgacctgattctcc 1306 Query: 265 tcggcggagccgccctctaggaacacgccgatgaccttgccgtccttgacccagtaggtg 324 || || ||||||||||| ||||| ||||||| ||||||||||||||||| |||||| | | Sbjct: 1305 tccgccgagccgccctcgaggaagacgccgacgaccttgccgtccttgatccagtacgag 1246 Query: 325 ccgaacttgggcttggccgcagctgggtcgttgtccccgaacagcaccgtctcgccaacg 384 |||||||||||||||||||| | ||||||||||| ||||||||||| |||||| ||| Sbjct: 1245 ccgaacttgggcttggccgccgtggggtcgttgtcgccgaacagcacatcctcgccgacg 1186 Query: 385 ttgtcgccgtagaactgccacgcgacgtcgaacgacctagagtagaagtagggcaggtag 444 |||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 1185 ttgtcgccgtagaactgccacgagaggtcgaacgaccgggagtagaagtagggcaggtag 1126 Query: 445 tcgtactccgccacggactcaccggactccttggccttgatagcctttactgcctgctcg 504 |||||||||| ||| ||||| |||| |||||| |||||||| ||||| || ||||||||| Sbjct: 1125 tcgtactccggcaccgactcgccggcctccttcgccttgatcgccttcacggcctgctcg 1066 Query: 505 gccgatttccgagcatggtcgacgtgctccactctcctcggctcgtcgtacagcttcatg 564 || ||||| ||||||||||| || ||||| |||||||| ||| | ||| |||||||| Sbjct: 1065 gctgatttgcgagcatggtcaacatgctctactctcctaatctcattgtatagcttcatc 1006 Query: 565 gggaaagtcgccacatcaccgatggcatatacaccagcgacgcttgtttcgaagaatgcg 624 ||||| | ||||| || | ||||| |||||||||| ||||| |||||||||||||| Sbjct: 1005 gggaaggcggccacgtcggcaatggcgtatacaccaggaacgctcgtttcgaagaatgca 946 Query: 625 tcagtcttgagtccacctttctcctcatcaacttggcctttgaagaggccttgtcagtgg 684 |||||||||| |||||| |||||||| ||||||| || ||||||| | |||||||| Sbjct: 945 tcagtcttgattccacccttctcctctgcaacttgacccttgaaga-gatgagtcagtgg 887 Query: 685 cctgccaccgac 696 |||||||||||| Sbjct: 886 cctgccaccgac 875
>dbj|AK102459.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094C01, full insert sequence Length = 1720 Score = 420 bits (212), Expect = e-114 Identities = 423/492 (85%), Gaps = 1/492 (0%) Strand = Plus / Minus Query: 205 gcctccacgtcggccaccggcggctgggccctggcgaccttggcgatggcctgattctcg 264 ||||| |||||||||||||||||||| || |||||||||||||| ||| |||||||||| Sbjct: 1365 gcctcgacgtcggccaccggcggctgagctctggcgaccttggcaatgacctgattctcc 1306 Query: 265 tcggcggagccgccctctaggaacacgccgatgaccttgccgtccttgacccagtaggtg 324 || || ||||||||||| ||||| ||||||| ||||||||||||||||| |||||| | | Sbjct: 1305 tccgccgagccgccctcgaggaagacgccgacgaccttgccgtccttgatccagtacgag 1246 Query: 325 ccgaacttgggcttggccgcagctgggtcgttgtccccgaacagcaccgtctcgccaacg 384 |||||||||||||||||||| | ||||||||||| ||||||||||| |||||| ||| Sbjct: 1245 ccgaacttgggcttggccgccgtggggtcgttgtcgccgaacagcacatcctcgccgacg 1186 Query: 385 ttgtcgccgtagaactgccacgcgacgtcgaacgacctagagtagaagtagggcaggtag 444 |||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 1185 ttgtcgccgtagaactgccacgagaggtcgaacgaccgggagtagaagtagggcaggtag 1126 Query: 445 tcgtactccgccacggactcaccggactccttggccttgatagcctttactgcctgctcg 504 |||||||||| ||| ||||| |||| |||||| |||||||| ||||| || ||||||||| Sbjct: 1125 tcgtactccggcaccgactcgccggcctccttcgccttgatcgccttcacggcctgctcg 1066 Query: 505 gccgatttccgagcatggtcgacgtgctccactctcctcggctcgtcgtacagcttcatg 564 || ||||| ||||||||||| || ||||| |||||||| ||| | ||| |||||||| Sbjct: 1065 gctgatttgcgagcatggtcaacatgctctactctcctaatctcattgtatagcttcatc 1006 Query: 565 gggaaagtcgccacatcaccgatggcatatacaccagcgacgcttgtttcgaagaatgcg 624 ||||| | ||||| || | ||||| |||||||||| ||||| |||||||||||||| Sbjct: 1005 gggaaggcggccacgtcggcaatggcgtatacaccaggaacgctcgtttcgaagaatgca 946 Query: 625 tcagtcttgagtccacctttctcctcatcaacttggcctttgaagaggccttgtcagtgg 684 |||||||||| |||||| |||||||| ||||||| || ||||||| | |||||||| Sbjct: 945 tcagtcttgattccacccttctcctctgcaacttgacccttgaaga-gatgagtcagtgg 887 Query: 685 cctgccaccgac 696 |||||||||||| Sbjct: 886 cctgccaccgac 875
>dbj|AK059351.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-C10, full insert sequence Length = 694 Score = 361 bits (182), Expect = 2e-96 Identities = 299/338 (88%) Strand = Plus / Minus Query: 205 gcctccacgtcggccaccggcggctgggccctggcgaccttggcgatggcctgattctcg 264 ||||| |||||||||||||||||||| || |||||||||||||| ||| |||||||||| Sbjct: 338 gcctcgacgtcggccaccggcggctgagctctggcgaccttggcaatgacctgattctcc 279 Query: 265 tcggcggagccgccctctaggaacacgccgatgaccttgccgtccttgacccagtaggtg 324 || || ||||||||||| ||||| ||||||| ||||||||||||||||| |||||| | | Sbjct: 278 tccgccgagccgccctcgaggaagacgccgacgaccttgccgtccttgatccagtacgag 219 Query: 325 ccgaacttgggcttggccgcagctgggtcgttgtccccgaacagcaccgtctcgccaacg 384 |||||||||||||||||||| | ||||||||||| ||||||||||| |||||| ||| Sbjct: 218 ccgaacttgggcttggccgccgtggggtcgttgtcgccgaacagcacatcctcgccgacg 159 Query: 385 ttgtcgccgtagaactgccacgcgacgtcgaacgacctagagtagaagtagggcaggtag 444 |||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 158 ttgtcgccgtagaactgccacgagaggtcgaacgaccgggagtagaagtagggcaggtag 99 Query: 445 tcgtactccgccacggactcaccggactccttggccttgatagcctttactgcctgctcg 504 |||||||||| ||| ||||| |||| |||||| |||||||| ||||| || ||||||||| Sbjct: 98 tcgtactccggcaccgactcgccggcctccttcgccttgatcgccttcacggcctgctcg 39 Query: 505 gccgatttccgagcatggtcgacgtgctccactctcct 542 || ||||| ||||||||||| || ||||| |||||||| Sbjct: 38 gctgatttgcgagcatggtcaacatgctctactctcct 1
>dbj|AB026731.1| Oryza sativa (japonica cultivar-group) mRNA for monodehydroascorbate reductase, partial cds Length = 1339 Score = 337 bits (170), Expect = 3e-89 Identities = 354/414 (85%), Gaps = 1/414 (0%) Strand = Plus / Minus Query: 283 aggaacacgccgatgaccttgccgtccttgacccagtaggtgccgaacttgggcttggcc 342 ||||| ||||||| ||||||||||||||||| |||||| | ||||||||||||||||||| Sbjct: 1335 aggaagacgccgacgaccttgccgtccttgatccagtacgagccgaacttgggcttggcc 1276 Query: 343 gcagctgggtcgttgtccccgaacagcaccgtctcgccaacgttgtcgccgtagaactgc 402 || | ||||||||||| ||||||||||| |||||| ||||||||||||||||||||| Sbjct: 1275 gccgtggggtcgttgtcgccgaacagcacatcctcgccgacgttgtcgccgtagaactgc 1216 Query: 403 cacgcgacgtcgaacgacctagagtagaagtagggcaggtagtcgtactccgccacggac 462 |||| || ||||||||||| ||||||||||||||||||||||||||||||| ||| ||| Sbjct: 1215 cacgagaggtcgaacgaccgggagtagaagtagggcaggtagtcgtactccggcaccgac 1156 Query: 463 tcaccggactccttggccttgatagcctttactgcctgctcggccgatttccgagcatgg 522 || |||| |||||| |||||||| ||||| || ||||||||||| ||||| ||||||||| Sbjct: 1155 tcgccggcctccttcgccttgatcgccttcacggcctgctcggctgatttgcgagcatgg 1096 Query: 523 tcgacgtgctccactctcctcggctcgtcgtacagcttcatggggaaagtcgccacatca 582 || || ||||| |||||||| ||| | ||| |||||||| ||||| | ||||| || Sbjct: 1095 tcaacatgctctactctcctaatctcattgtatagcttcatcgggaaggcggccacgtcg 1036 Query: 583 ccgatggcatatacaccagcgacgcttgtttcgaagaatgcgtcagtcttgagtccacct 642 | ||||| |||||||||| ||||| |||||||||||||| |||||||||| |||||| Sbjct: 1035 gcaatggcgtatacaccaggaacgctcgtttcgaagaatgcatcagtcttgattccaccc 976 Query: 643 ttctcctcatcaacttggcctttgaagaggccttgtcagtggcctgccaccgac 696 |||||||| ||||||| || ||||||| | |||||||||||||||||||| Sbjct: 975 ttctcctctgcaacttgacccttgaaga-gatgagtcagtggcctgccaccgac 923
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 313 bits (158), Expect = 4e-82 Identities = 254/286 (88%) Strand = Plus / Minus Query: 205 gcctccacgtcggccaccggcggctgggccctggcgaccttggcgatggcctgattctcg 264 ||||| |||||||||||||||||||| || |||||||||||||| ||| |||||||||| Sbjct: 27895523 gcctcgacgtcggccaccggcggctgagctctggcgaccttggcaatgacctgattctcc 27895464 Query: 265 tcggcggagccgccctctaggaacacgccgatgaccttgccgtccttgacccagtaggtg 324 || || ||||||||||| ||||| ||||||| ||||||||||||||||| |||||| | | Sbjct: 27895463 tccgccgagccgccctcgaggaagacgccgacgaccttgccgtccttgatccagtacgag 27895404 Query: 325 ccgaacttgggcttggccgcagctgggtcgttgtccccgaacagcaccgtctcgccaacg 384 |||||||||||||||||||| | ||||||||||| ||||||||||| |||||| ||| Sbjct: 27895403 ccgaacttgggcttggccgccgtggggtcgttgtcgccgaacagcacatcctcgccgacg 27895344 Query: 385 ttgtcgccgtagaactgccacgcgacgtcgaacgacctagagtagaagtagggcaggtag 444 |||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 27895343 ttgtcgccgtagaactgccacgagaggtcgaacgaccgggagtagaagtagggcaggtag 27895284 Query: 445 tcgtactccgccacggactcaccggactccttggccttgatagcct 490 |||||||||| ||| ||||| |||| |||||| |||||||| |||| Sbjct: 27895283 tcgtactccggcaccgactcgccggcctccttcgccttgatcgcct 27895238 Score = 79.8 bits (40), Expect = 1e-11 Identities = 112/136 (82%) Strand = Plus / Minus Query: 496 gcctgctcggccgatttccgagcatggtcgacgtgctccactctcctcggctcgtcgtac 555 ||||||||||| ||||| ||||||||||| || ||||| |||||||| ||| | ||| Sbjct: 27895126 gcctgctcggctgatttgcgagcatggtcaacatgctctactctcctaatctcattgtat 27895067 Query: 556 agcttcatggggaaagtcgccacatcaccgatggcatatacaccagcgacgcttgtttcg 615 |||||||| ||||| | ||||| || | ||||| |||||||||| ||||| |||||| Sbjct: 27895066 agcttcatcgggaaggcggccacgtcggcaatggcgtatacaccaggaacgctcgtttcg 27895007 Query: 616 aagaatgcgtcagtct 631 |||||||| ||||||| Sbjct: 27895006 aagaatgcatcagtct 27894991 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 677 gtcagtggcctgccaccgac 696 |||||||||||||||||||| Sbjct: 27894762 gtcagtggcctgccaccgac 27894743
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 313 bits (158), Expect = 4e-82 Identities = 254/286 (88%) Strand = Plus / Minus Query: 205 gcctccacgtcggccaccggcggctgggccctggcgaccttggcgatggcctgattctcg 264 ||||| |||||||||||||||||||| || |||||||||||||| ||| |||||||||| Sbjct: 103601 gcctcgacgtcggccaccggcggctgagctctggcgaccttggcaatgacctgattctcc 103542 Query: 265 tcggcggagccgccctctaggaacacgccgatgaccttgccgtccttgacccagtaggtg 324 || || ||||||||||| ||||| ||||||| ||||||||||||||||| |||||| | | Sbjct: 103541 tccgccgagccgccctcgaggaagacgccgacgaccttgccgtccttgatccagtacgag 103482 Query: 325 ccgaacttgggcttggccgcagctgggtcgttgtccccgaacagcaccgtctcgccaacg 384 |||||||||||||||||||| | ||||||||||| ||||||||||| |||||| ||| Sbjct: 103481 ccgaacttgggcttggccgccgtggggtcgttgtcgccgaacagcacatcctcgccgacg 103422 Query: 385 ttgtcgccgtagaactgccacgcgacgtcgaacgacctagagtagaagtagggcaggtag 444 |||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 103421 ttgtcgccgtagaactgccacgagaggtcgaacgaccgggagtagaagtagggcaggtag 103362 Query: 445 tcgtactccgccacggactcaccggactccttggccttgatagcct 490 |||||||||| ||| ||||| |||| |||||| |||||||| |||| Sbjct: 103361 tcgtactccggcaccgactcgccggcctccttcgccttgatcgcct 103316 Score = 79.8 bits (40), Expect = 1e-11 Identities = 112/136 (82%) Strand = Plus / Minus Query: 496 gcctgctcggccgatttccgagcatggtcgacgtgctccactctcctcggctcgtcgtac 555 ||||||||||| ||||| ||||||||||| || ||||| |||||||| ||| | ||| Sbjct: 103204 gcctgctcggctgatttgcgagcatggtcaacatgctctactctcctaatctcattgtat 103145 Query: 556 agcttcatggggaaagtcgccacatcaccgatggcatatacaccagcgacgcttgtttcg 615 |||||||| ||||| | ||||| || | ||||| |||||||||| ||||| |||||| Sbjct: 103144 agcttcatcgggaaggcggccacgtcggcaatggcgtatacaccaggaacgctcgtttcg 103085 Query: 616 aagaatgcgtcagtct 631 |||||||| ||||||| Sbjct: 103084 aagaatgcatcagtct 103069 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 677 gtcagtggcctgccaccgac 696 |||||||||||||||||||| Sbjct: 102840 gtcagtggcctgccaccgac 102821
>dbj|AK071558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100J06, full insert sequence Length = 1668 Score = 234 bits (118), Expect = 3e-58 Identities = 310/374 (82%) Strand = Plus / Minus Query: 298 accttgccgtccttgacccagtaggtgccgaacttgggcttggccgcagctgggtcgttg 357 |||||||||||||||| |||||||| ||||||||||||||||| | | ||||| || Sbjct: 1394 accttgccgtccttgatccagtaggacccgaacttgggcttggcagaggtcgggtcactg 1335 Query: 358 tccccgaacagcaccgtctcgccaacgttgtcgccgtagaactgccacgcgacgtcgaac 417 || |||||||| | || ||||||||||||||||||||||| ||||| | | |||||| Sbjct: 1334 tctccgaacaggatggtgtcgccaacgttgtcgccgtagaattgccatcccaggtcgaat 1275 Query: 418 gacctagagtagaagtagggcaggtagtcgtactccgccacggactcaccggactccttg 477 |||| ||||||||||| ||||| ||||| |||||| | |||||||| |||||||| || Sbjct: 1274 gaccgggagtagaagtatggcagatagtcatactccacaacggactcgccggactctttt 1215 Query: 478 gccttgatagcctttactgcctgctcggccgatttccgagcatggtcgacgtgctccact 537 ||||||| |||||||| |||||||| || || |||| ||||||||| || || |||||| Sbjct: 1214 cccttgattgcctttacagcctgctctgcagacttcctagcatggtcaacatgttccact 1155 Query: 538 ctcctcggctcgtcgtacagcttcatggggaaagtcgccacatcaccgatggcatataca 597 |||||| ||| | ||||| |||||||||||| || ||||||||||||| ||||| || Sbjct: 1154 ctcctcaactcattgtacatcttcatggggaaggtggccacatcaccgacagcatagact 1095 Query: 598 ccagcgacgcttgtttcgaagaatgcgtcagtcttgagtccacctttctcctcatcaact 657 |||| || |||||||| ||||| || || ||||| | |||||||||||||||| ||||| Sbjct: 1094 ccaggaacacttgtttcaaagaaagcatcggtcttaattccacctttctcctcagcaact 1035 Query: 658 tggcctttgaagag 671 || ||||| ||||| Sbjct: 1034 tgacctttaaagag 1021
>dbj|D85764.1| Oryza sativa (japonica cultivar-group) mRNA for cytosolic monodehydroascorbate reductase, complete cds Length = 1570 Score = 234 bits (118), Expect = 3e-58 Identities = 310/374 (82%) Strand = Plus / Minus Query: 298 accttgccgtccttgacccagtaggtgccgaacttgggcttggccgcagctgggtcgttg 357 |||||||||||||||| |||||||| ||||||||||||||||| | | ||||| || Sbjct: 1272 accttgccgtccttgatccagtaggacccgaacttgggcttggcagaggtcgggtcactg 1213 Query: 358 tccccgaacagcaccgtctcgccaacgttgtcgccgtagaactgccacgcgacgtcgaac 417 || |||||||| | || ||||||||||||||||||||||| ||||| | | |||||| Sbjct: 1212 tctccgaacaggatggtgtcgccaacgttgtcgccgtagaattgccatcccaggtcgaat 1153 Query: 418 gacctagagtagaagtagggcaggtagtcgtactccgccacggactcaccggactccttg 477 |||| ||||||||||| ||||| ||||| |||||| | |||||||| |||||||| || Sbjct: 1152 gaccgggagtagaagtatggcagatagtcatactccacaacggactcgccggactctttt 1093 Query: 478 gccttgatagcctttactgcctgctcggccgatttccgagcatggtcgacgtgctccact 537 ||||||| |||||||| |||||||| || || |||| ||||||||| || || |||||| Sbjct: 1092 cccttgattgcctttacagcctgctctgcagacttcctagcatggtcaacatgttccact 1033 Query: 538 ctcctcggctcgtcgtacagcttcatggggaaagtcgccacatcaccgatggcatataca 597 |||||| ||| | ||||| |||||||||||| || ||||||||||||| ||||| || Sbjct: 1032 ctcctcaactcattgtacatcttcatggggaaggtggccacatcaccgacagcatagact 973 Query: 598 ccagcgacgcttgtttcgaagaatgcgtcagtcttgagtccacctttctcctcatcaact 657 |||| || |||||||| ||||| || || ||||| | |||||||||||||||| ||||| Sbjct: 972 ccaggaacacttgtttcaaagaaagcatcggtcttaattccacctttctcctcagcaact 913 Query: 658 tggcctttgaagag 671 || ||||| ||||| Sbjct: 912 tgacctttaaagag 899
>gb|AY103967.1| Zea mays PCO066827 mRNA sequence Length = 1675 Score = 216 bits (109), Expect = 8e-53 Identities = 369/453 (81%), Gaps = 2/453 (0%) Strand = Plus / Minus Query: 220 accggcggctgggccctggcgaccttggcgatggcctgattctcgtcggcggagccgccc 279 ||||||||||||| | || |||||||| ||| ||| |||||||| | || |||||| Sbjct: 1386 accggcggctgggttttcgccaccttggcaatgaccttgttctcgtccggtgacccgccc 1327 Query: 280 tctaggaacacgccgatgaccttgccgtccttgacccagtaggtgccgaacttgggcttg 339 || ||||| |||| | ||||||||||||||| | |||||| | |||||||||||||||| Sbjct: 1326 tccaggaaggcgcccaagaccttgccgtccttaatccagtacgagccgaacttgggcttg 1267 Query: 340 gccgcagctggg-tcgttgtccccgaacagcaccgtctcgccaacgttgtcgccgtagaa 398 | | || |||| || |||| || ||||| | || ||||| ||||||||||||||||| Sbjct: 1266 -ctggaggtggggtcactgtcgccaaacaggatggtttcgcccacgttgtcgccgtagaa 1208 Query: 399 ctgccacgcgacgtcgaacgacctagagtagaagtagggcaggtagtcgtactccgccac 458 |||||||| | |||||| || | ||||||||||| ||||||||||| ||||||| || Sbjct: 1207 ttgccacgccaggtcgaatgatcgggagtagaagtatggcaggtagtcatactccggaac 1148 Query: 459 ggactcaccggactccttggccttgatagcctttactgcctgctcggccgatttccgagc 518 | ||||||||||| ||| ||||||| |||||||| |||||||| || || || | || Sbjct: 1147 tggttcaccggactctttgcccttgatcgcctttacagcctgctctgcagactttctaga 1088 Query: 519 atggtcgacgtgctccactctcctcggctcgtcgtacagcttcatggggaaagtcgccac 578 |||||| || || |||||||||||| ||| | ||||| ||||| ||||| || ||||| Sbjct: 1087 atggtcaacatgttccactctcctcaactcattgtacatcttcaaagggaaggtagccac 1028 Query: 579 atcaccgatggcatatacaccagcgacgcttgtttcgaagaatgcgtcagtcttgagtcc 638 |||||| ||||||||||| |||| ||||||||||| ||| | ||||||||||||| ||| Sbjct: 1027 atcaccaatggcatatactccaggaacgcttgtttcaaaggaagcgtcagtcttgattcc 968 Query: 639 acctttctcctcatcaacttggcctttgaagag 671 ||| ||||||||| ||||||| || |||||||| Sbjct: 967 acccttctcctcagcaacttgacccttgaagag 935
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 121 bits (61), Expect = 3e-24 Identities = 160/193 (82%) Strand = Plus / Minus Query: 298 accttgccgtccttgacccagtaggtgccgaacttgggcttggccgcagctgggtcgttg 357 |||||||||||||||| |||||||| ||||||||||||||||| | | ||||| || Sbjct: 22346963 accttgccgtccttgatccagtaggacccgaacttgggcttggcagaggtcgggtcactg 22346904 Query: 358 tccccgaacagcaccgtctcgccaacgttgtcgccgtagaactgccacgcgacgtcgaac 417 || |||||||| | || ||||||||||||||||||||||| ||||| | | |||||| Sbjct: 22346903 tctccgaacaggatggtgtcgccaacgttgtcgccgtagaattgccatcccaggtcgaat 22346844 Query: 418 gacctagagtagaagtagggcaggtagtcgtactccgccacggactcaccggactccttg 477 |||| ||||||||||| ||||| ||||| |||||| | |||||||| |||||||| || Sbjct: 22346843 gaccgggagtagaagtatggcagatagtcatactccacaacggactcgccggactctttt 22346784 Query: 478 gccttgatagcct 490 ||||||| |||| Sbjct: 22346783 cccttgattgcct 22346771 Score = 81.8 bits (41), Expect = 3e-12 Identities = 110/133 (82%) Strand = Plus / Minus Query: 488 cctttactgcctgctcggccgatttccgagcatggtcgacgtgctccactctcctcggct 547 ||||||| |||||||| || || |||| ||||||||| || || |||||||||||| || Sbjct: 22346233 cctttacagcctgctctgcagacttcctagcatggtcaacatgttccactctcctcaact 22346174 Query: 548 cgtcgtacagcttcatggggaaagtcgccacatcaccgatggcatatacaccagcgacgc 607 | | ||||| |||||||||||| || ||||||||||||| ||||| || |||| || | Sbjct: 22346173 cattgtacatcttcatggggaaggtggccacatcaccgacagcatagactccaggaacac 22346114 Query: 608 ttgtttcgaagaa 620 ||||||| ||||| Sbjct: 22346113 ttgtttcaaagaa 22346101 Score = 48.1 bits (24), Expect = 0.041 Identities = 33/36 (91%) Strand = Plus / Minus Query: 636 tccacctttctcctcatcaacttggcctttgaagag 671 |||||||||||||||| ||||||| ||||| ||||| Sbjct: 22345836 tccacctttctcctcagcaacttgacctttaaagag 22345801
>dbj|AP005558.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1155_H10 Length = 140475 Score = 121 bits (61), Expect = 3e-24 Identities = 160/193 (82%) Strand = Plus / Minus Query: 298 accttgccgtccttgacccagtaggtgccgaacttgggcttggccgcagctgggtcgttg 357 |||||||||||||||| |||||||| ||||||||||||||||| | | ||||| || Sbjct: 108971 accttgccgtccttgatccagtaggacccgaacttgggcttggcagaggtcgggtcactg 108912 Query: 358 tccccgaacagcaccgtctcgccaacgttgtcgccgtagaactgccacgcgacgtcgaac 417 || |||||||| | || ||||||||||||||||||||||| ||||| | | |||||| Sbjct: 108911 tctccgaacaggatggtgtcgccaacgttgtcgccgtagaattgccatcccaggtcgaat 108852 Query: 418 gacctagagtagaagtagggcaggtagtcgtactccgccacggactcaccggactccttg 477 |||| ||||||||||| ||||| ||||| |||||| | |||||||| |||||||| || Sbjct: 108851 gaccgggagtagaagtatggcagatagtcatactccacaacggactcgccggactctttt 108792 Query: 478 gccttgatagcct 490 ||||||| |||| Sbjct: 108791 cccttgattgcct 108779 Score = 81.8 bits (41), Expect = 3e-12 Identities = 110/133 (82%) Strand = Plus / Minus Query: 488 cctttactgcctgctcggccgatttccgagcatggtcgacgtgctccactctcctcggct 547 ||||||| |||||||| || || |||| ||||||||| || || |||||||||||| || Sbjct: 108241 cctttacagcctgctctgcagacttcctagcatggtcaacatgttccactctcctcaact 108182 Query: 548 cgtcgtacagcttcatggggaaagtcgccacatcaccgatggcatatacaccagcgacgc 607 | | ||||| |||||||||||| || ||||||||||||| ||||| || |||| || | Sbjct: 108181 cattgtacatcttcatggggaaggtggccacatcaccgacagcatagactccaggaacac 108122 Query: 608 ttgtttcgaagaa 620 ||||||| ||||| Sbjct: 108121 ttgtttcaaagaa 108109 Score = 48.1 bits (24), Expect = 0.041 Identities = 33/36 (91%) Strand = Plus / Minus Query: 636 tccacctttctcctcatcaacttggcctttgaagag 671 |||||||||||||||| ||||||| ||||| ||||| Sbjct: 107844 tccacctttctcctcagcaacttgacctttaaagag 107809
>gb|DQ175833.1| Hordeum vulgare clone DsB33 Ds insertion site flanking region genomic sequence Length = 887 Score = 67.9 bits (34), Expect = 4e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 223 ggcggctgggccctggcgaccttggcgatggcctgattctcgtcggcggagccgccctct 282 ||||||||| |||| |||| |||||||||||| |||||||| | || |||||||| Sbjct: 654 ggcggctggtccctcgcgagcttggcgatggcgccgttctcgtccggcgacccgccctcc 595 Query: 283 aggaacacgccgatgaccttgccgtccttgacccagta 320 ||||||||||| | | ||||||||||||||||||||| Sbjct: 594 aggaacacgcccacgcacttgccgtccttgacccagta 557 Score = 63.9 bits (32), Expect = 7e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 424 gagtagaagtagggcaggtagtcgtactccgc 455 |||||||||||||||||||||||||||||||| Sbjct: 32 gagtagaagtagggcaggtagtcgtactccgc 1
>gb|DQ175852.1| Hordeum vulgare clone DsC17 Ds insertion site flanking region genomic sequence Length = 538 Score = 63.9 bits (32), Expect = 7e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 424 gagtagaagtagggcaggtagtcgtactccgc 455 |||||||||||||||||||||||||||||||| Sbjct: 74 gagtagaagtagggcaggtagtcgtactccgc 43
>ref|NM_111829.2| Arabidopsis thaliana disulfide oxidoreductase/ oxidoreductase AT3G09940 mRNA, complete cds Length = 1493 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 607 cttgtttcgaagaatgcgtcagtcttgagtccacctttctcctcatcaacttggcctttg 666 ||||||| |||||| | |||||||| | |||||| |||||||| |||| |||||||||| Sbjct: 914 cttgttttgaagaacccatcagtctttattccacccttctcctcttcaagttggcctttg 855 Query: 667 aagag 671 ||||| Sbjct: 854 aagag 850
>gb|BT001054.1| Arabidopsis thaliana At3g09940/T22K18_25 mRNA, complete cds Length = 1326 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 607 cttgtttcgaagaatgcgtcagtcttgagtccacctttctcctcatcaacttggcctttg 666 ||||||| |||||| | |||||||| | |||||| |||||||| |||| |||||||||| Sbjct: 869 cttgttttgaagaacccatcagtctttattccacccttctcctcttcaagttggcctttg 810 Query: 667 aagag 671 ||||| Sbjct: 809 aagag 805
>gb|AY093765.1| Arabidopsis thaliana AT3g09940/T22K18_25 mRNA, complete cds Length = 1477 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 607 cttgtttcgaagaatgcgtcagtcttgagtccacctttctcctcatcaacttggcctttg 666 ||||||| |||||| | |||||||| | |||||| |||||||| |||| |||||||||| Sbjct: 914 cttgttttgaagaacccatcagtctttattccacccttctcctcttcaagttggcctttg 855 Query: 667 aagag 671 ||||| Sbjct: 854 aagag 850
>emb|BX824330.1|CNS0A6SM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH3ZH05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1521 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 607 cttgtttcgaagaatgcgtcagtcttgagtccacctttctcctcatcaacttggcctttg 666 ||||||| |||||| | |||||||| | |||||| |||||||| |||| |||||||||| Sbjct: 982 cttgttttgaagaacccatcagtctttattccacccttctcctcttcaagttggcctttg 923 Query: 667 aagag 671 ||||| Sbjct: 922 aagag 918
>gb|AY084556.1| Arabidopsis thaliana clone 11160 mRNA, complete sequence Length = 1489 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 607 cttgtttcgaagaatgcgtcagtcttgagtccacctttctcctcatcaacttggcctttg 666 ||||||| |||||| | |||||||| | |||||| |||||||| |||| |||||||||| Sbjct: 912 cttgttttgaagaacccatcagtctttattccacccttctcctcttcaagttggcctttg 853 Query: 667 aagag 671 ||||| Sbjct: 852 aagag 848
>gb|DQ159869.1| Physcomitrella patens monodehydroascorbate reductase I (Mdhar1) gene, promoter region and complete cds Length = 6026 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 367 agcaccgtctcgccaacgttgtcgccgtagaactgccacg 406 ||||| |||||||| || |||||||||||||||||||||| Sbjct: 5562 agcacagtctcgcccacattgtcgccgtagaactgccacg 5523
>gb|AY652702.1| Capsicum annuum monodehydroascorbate reductase (MDHAR1) mRNA, partial cds Length = 279 Score = 52.0 bits (26), Expect = 0.003 Identities = 53/62 (85%) Strand = Plus / Minus Query: 607 cttgtttcgaagaatgcgtcagtcttgagtccacctttctcctcatcaacttggcctttg 666 ||||||| |||||| || |||||||| | ||| || || |||||||||||||| |||||| Sbjct: 158 cttgttttgaagaaggcatcagtcttaattcctcccttgtcctcatcaacttgccctttg 99 Query: 667 aa 668 || Sbjct: 98 aa 97
>ref|XM_467387.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1440 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 383 cgttgtcgccgtagaactgccacg 406 |||||||||||||||||||||||| Sbjct: 1084 cgttgtcgccgtagaactgccacg 1061
>gb|AC010927.5|ATAC010927 Arabidopsis thaliana chromosome III BAC T22K18 genomic sequence, complete sequence Length = 96232 Score = 48.1 bits (24), Expect = 0.041 Identities = 33/36 (91%) Strand = Plus / Minus Query: 636 tccacctttctcctcatcaacttggcctttgaagag 671 |||||| |||||||| |||| ||||||||||||||| Sbjct: 86387 tccacccttctcctcttcaagttggcctttgaagag 86352
>gb|AC015985.10|ATAC015985 Arabidopsis thaliana chromosome III BAC F8A24 genomic sequence, complete sequence Length = 72902 Score = 48.1 bits (24), Expect = 0.041 Identities = 33/36 (91%) Strand = Plus / Minus Query: 636 tccacctttctcctcatcaacttggcctttgaagag 671 |||||| |||||||| |||| ||||||||||||||| Sbjct: 9572 tccacccttctcctcttcaagttggcctttgaagag 9537
>gb|AF480496.1| Oryza sativa clone BAC 49D11, complete sequence Length = 158050 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 383 cgttgtcgccgtagaactgccacg 406 |||||||||||||||||||||||| Sbjct: 116968 cgttgtcgccgtagaactgccacg 116945
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Plus Query: 383 cgttgtcgccgtagaactgccacg 406 |||||||||||||||||||||||| Sbjct: 29245663 cgttgtcgccgtagaactgccacg 29245686
>dbj|AP005844.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0060O16 Length = 164373 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Plus Query: 383 cgttgtcgccgtagaactgccacg 406 |||||||||||||||||||||||| Sbjct: 43008 cgttgtcgccgtagaactgccacg 43031
>dbj|AP005323.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0680A05 Length = 168092 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Plus Query: 383 cgttgtcgccgtagaactgccacg 406 |||||||||||||||||||||||| Sbjct: 135631 cgttgtcgccgtagaactgccacg 135654
>ref|NM_120444.2| Arabidopsis thaliana disulfide oxidoreductase/ oxidoreductase AT5G03630 mRNA, complete cds Length = 1581 Score = 44.1 bits (22), Expect = 0.64 Identities = 151/194 (77%) Strand = Plus / Minus Query: 478 gccttgatagcctttactgcctgctcggccgatttccgagcatggtcgacgtgctccact 537 |||||||| |||||||| || || || || ||||| ||||||||||| ||||| || || Sbjct: 1056 gccttgattgcctttacggcttgttcagcggatttgcgagcatggtcaacgtgttcaacg 997 Query: 538 ctcctcggctcgtcgtacagcttcatggggaaagtcgccacatcaccgatggcatataca 597 | ||| || | ||| || ||||| ||||| || || |||||||| ||||| |||||| Sbjct: 996 cgtctcatttcattgtagagtttcattgggaaggtggctacatcaccaatggcgtataca 937 Query: 598 ccagcgacgcttgtttcgaagaatgcgtcagtcttgagtccacctttctcctcatcaact 657 | | | |||||||| |||||| | |||||||| | ||||| ||||| || |||||| Sbjct: 936 tctggaaggcttgttttgaagaacccatcagtcttcaaaccacccttctcttcttcaact 877 Query: 658 tggcctttgaagag 671 || |||||||||| Sbjct: 876 tgatctttgaagag 863
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 194 ccttggcgagcgcctccacgtcggcc 219 ||||||||| |||||||||||||||| Sbjct: 292100 ccttggcgaccgcctccacgtcggcc 292075
>gb|AY142000.1| Arabidopsis thaliana At5g03630/F17C15_50 mRNA, complete cds Length = 1308 Score = 44.1 bits (22), Expect = 0.64 Identities = 151/194 (77%) Strand = Plus / Minus Query: 478 gccttgatagcctttactgcctgctcggccgatttccgagcatggtcgacgtgctccact 537 |||||||| |||||||| || || || || ||||| ||||||||||| ||||| || || Sbjct: 995 gccttgattgcctttacggcttgttcagcggatttgcgagcatggtcaacgtgttcaacg 936 Query: 538 ctcctcggctcgtcgtacagcttcatggggaaagtcgccacatcaccgatggcatataca 597 | ||| || | ||| || ||||| ||||| || || |||||||| ||||| |||||| Sbjct: 935 cgtctcatttcattgtagagtttcattgggaaggtggctacatcaccaatggcgtataca 876 Query: 598 ccagcgacgcttgtttcgaagaatgcgtcagtcttgagtccacctttctcctcatcaact 657 | | | |||||||| |||||| | |||||||| | ||||| ||||| || |||||| Sbjct: 875 tctggaaggcttgttttgaagaacccatcagtcttcaaaccacccttctcttcttcaact 816 Query: 658 tggcctttgaagag 671 || |||||||||| Sbjct: 815 tgatctttgaagag 802
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 288 cacgccgatgaccttgccgtccttga 313 ||||||| |||||||||||||||||| Sbjct: 2805150 cacgccggtgaccttgccgtccttga 2805125 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 tgaccttgccgtccttgacc 315 |||||||||||||||||||| Sbjct: 4337179 tgaccttgccgtccttgacc 4337198
>gb|AY057628.1| Arabidopsis thaliana AT5g03630/F17C15_50 mRNA, complete cds Length = 1577 Score = 44.1 bits (22), Expect = 0.64 Identities = 151/194 (77%) Strand = Plus / Minus Query: 478 gccttgatagcctttactgcctgctcggccgatttccgagcatggtcgacgtgctccact 537 |||||||| |||||||| || || || || ||||| ||||||||||| ||||| || || Sbjct: 1047 gccttgattgcctttacggcttgttcagcggatttgcgagcatggtcaacgtgttcaacg 988 Query: 538 ctcctcggctcgtcgtacagcttcatggggaaagtcgccacatcaccgatggcatataca 597 | ||| || | ||| || ||||| ||||| || || |||||||| ||||| |||||| Sbjct: 987 cgtctcatttcattgtagagtttcattgggaaggtggctacatcaccaatggcgtataca 928 Query: 598 ccagcgacgcttgtttcgaagaatgcgtcagtcttgagtccacctttctcctcatcaact 657 | | | |||||||| |||||| | |||||||| | ||||| ||||| || |||||| Sbjct: 927 tctggaaggcttgttttgaagaacccatcagtcttcaaaccacccttctcttcttcaact 868 Query: 658 tggcctttgaagag 671 || |||||||||| Sbjct: 867 tgatctttgaagag 854
>gb|AF428317.1|AF428317 Arabidopsis thaliana AT5g03630/F17C15_50 mRNA, complete cds Length = 1526 Score = 44.1 bits (22), Expect = 0.64 Identities = 151/194 (77%) Strand = Plus / Minus Query: 478 gccttgatagcctttactgcctgctcggccgatttccgagcatggtcgacgtgctccact 537 |||||||| |||||||| || || || || ||||| ||||||||||| ||||| || || Sbjct: 1044 gccttgattgcctttacggcttgttcagcggatttgcgagcatggtcaacgtgttcaacg 985 Query: 538 ctcctcggctcgtcgtacagcttcatggggaaagtcgccacatcaccgatggcatataca 597 | ||| || | ||| || ||||| ||||| || || |||||||| ||||| |||||| Sbjct: 984 cgtctcatttcattgtagagtttcattgggaaggtggctacatcaccaatggcgtataca 925 Query: 598 ccagcgacgcttgtttcgaagaatgcgtcagtcttgagtccacctttctcctcatcaact 657 | | | |||||||| |||||| | |||||||| | ||||| ||||| || |||||| Sbjct: 924 tctggaaggcttgttttgaagaacccatcagtcttcaaaccacccttctcttcttcaact 865 Query: 658 tggcctttgaagag 671 || |||||||||| Sbjct: 864 tgatctttgaagag 851
>gb|AY087318.1| Arabidopsis thaliana clone 34156 mRNA, complete sequence Length = 1538 Score = 44.1 bits (22), Expect = 0.64 Identities = 151/194 (77%) Strand = Plus / Minus Query: 478 gccttgatagcctttactgcctgctcggccgatttccgagcatggtcgacgtgctccact 537 |||||||| |||||||| || || || || ||||| ||||||||||| ||||| || || Sbjct: 1057 gccttgattgcctttacggcttgttcagcggatttgcgagcatggtcaacgtgttcaacg 998 Query: 538 ctcctcggctcgtcgtacagcttcatggggaaagtcgccacatcaccgatggcatataca 597 | ||| || | ||| || ||||| ||||| || || |||||||| ||||| |||||| Sbjct: 997 cgtctcatttcattgtagagtttcattgggaaggtggctacatcaccaatggcgtataca 938 Query: 598 ccagcgacgcttgtttcgaagaatgcgtcagtcttgagtccacctttctcctcatcaact 657 | | | |||||||| |||||| | |||||||| | ||||| ||||| || |||||| Sbjct: 937 tctggaaggcttgttttgaagaacccatcagtcttcaaaccacccttctcttcttcaact 878 Query: 658 tggcctttgaagag 671 || |||||||||| Sbjct: 877 tgatctttgaagag 864
>gb|AY969674.1| Uncultured basidiomycete isolate dfmo0690_245 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 596 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 35 cagcaacaccatcaaactccaaaag 59 |||||||||| |||||||||||||| Sbjct: 419 cagcaacaccctcaaactccaaaag 395
>gb|AY969639.1| Uncultured basidiomycete isolate dfmo0690_209 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 596 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 35 cagcaacaccatcaaactccaaaag 59 |||||||||| |||||||||||||| Sbjct: 419 cagcaacaccctcaaactccaaaag 395
>gb|AY562376.1| Parma microlepis clone PM2H16 microsatellite sequence Length = 537 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 caggggagggacaaacacaag 131 ||||||||||||||||||||| Sbjct: 194 caggggagggacaaacacaag 214
>gb|AC140336.2| Mus musculus BAC clone RP24-266F17 from chromosome 18, complete sequence Length = 186205 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 637 ccacctttctcctcatcaact 657 ||||||||||||||||||||| Sbjct: 13391 ccacctttctcctcatcaact 13371
>gb|AC109280.9| Mus musculus chromosome 18, clone RP23-400B7, complete sequence Length = 213683 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 637 ccacctttctcctcatcaact 657 ||||||||||||||||||||| Sbjct: 105777 ccacctttctcctcatcaact 105757
>gb|AY971875.1| Lycopersicon esculentum monodehydroascorbate reductase (MDHAR) mRNA, partial cds Length = 1419 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 508 gatttccgagcatggtcgacgtgctccac 536 ||||| ||||||||||| ||||||||||| Sbjct: 1342 gatttacgagcatggtcaacgtgctccac 1314
>gb|AE004674.1| Pseudomonas aeruginosa PAO1, section 235 of 529 of the complete genome Length = 11021 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 215 cggccaccggcggctgggccctggcgacc 243 |||||||||||||||||||| || ||||| Sbjct: 9935 cggccaccggcggctgggccatgccgacc 9963
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 228 ctgggccctggcgaccttggcgatggcct 256 ||||||| |||| |||||||||||||||| Sbjct: 792531 ctgggccttggccaccttggcgatggcct 792559
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 291 gccgatgaccttgccgtcctt 311 ||||||||||||||||||||| Sbjct: 2512009 gccgatgaccttgccgtcctt 2512029
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 acccagtaggtgccgaacttg 333 ||||||||||||||||||||| Sbjct: 464124 acccagtaggtgccgaacttg 464144
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 228 ctgggccctggcgaccttggcgatggcct 256 ||||||| |||| |||||||||||||||| Sbjct: 463611 ctgggccttggccaccttggcgatggcct 463639
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 cacgccgatgaccttgccgtc 308 ||||||||||||||||||||| Sbjct: 532004 cacgccgatgaccttgccgtc 532024
>emb|AL831781.8| Mouse DNA sequence from clone RP23-307O24 on chromosome 2, complete sequence Length = 140953 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 ggcaggggagggacaaacaca 129 ||||||||||||||||||||| Sbjct: 127280 ggcaggggagggacaaacaca 127260
>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome Length = 150715 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 tccacgtcggccaccggcgg 227 |||||||||||||||||||| Sbjct: 134504 tccacgtcggccaccggcgg 134485
>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome Length = 2201561 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 aacaccatcaaactccaaaa 58 |||||||||||||||||||| Sbjct: 2115717 aacaccatcaaactccaaaa 2115698
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 645 ctcctcatcaacttggcctttgaa 668 |||||| ||||||||||||||||| Sbjct: 5191 ctcctcctcaacttggcctttgaa 5214
>emb|AL672043.15| Human DNA sequence from clone RP11-322N21 on chromosome 1 Contains a novel gene, the gene for tetraspan 1 (TSPAN-1), gene FLJ20277 (FLJ31624) and the gene for a novel protein (FLJ25163), complete sequence Length = 87234 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 ctgggccctggcgaccttgg 247 |||||||||||||||||||| Sbjct: 22909 ctgggccctggcgaccttgg 22928
>emb|AL451084.19| Human DNA sequence from clone RP11-357H24 on chromosome 10 Contains the 3' end of the TCF7L2 gene for transcription factor 7-like 2 (T-cell specific, HMG-box), complete sequence Length = 183815 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 gccttgatagcctttactgc 497 |||||||||||||||||||| Sbjct: 111250 gccttgatagcctttactgc 111231
>emb|AL023653.1|HS753P9 Human DNA sequence from clone RP4-753P9 on chromosome Xq25-26.1 Contains the XPNPEP2 gene for X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound and the CXorf9 gene for chromosome X open reading frame 9, complete sequence Length = 116561 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 669 gaggccttgtcagtggcctg 688 |||||||||||||||||||| Sbjct: 74648 gaggccttgtcagtggcctg 74629
>emb|BX927155.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 8/10 Length = 349136 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 699 caacgatgaccatgtcggcatcga 722 |||||||||||||| ||||||||| Sbjct: 347417 caacgatgaccatgacggcatcga 347394
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16 Length = 348706 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 caccggcggctgggccctgg 238 |||||||||||||||||||| Sbjct: 268675 caccggcggctgggccctgg 268694
>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14 Length = 347894 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 caccggcggctgggccctgg 238 |||||||||||||||||||| Sbjct: 340349 caccggcggctgggccctgg 340368
>gb|AC015855.13| Homo sapiens chromosome , clone CTC-480C19, complete sequence Length = 96963 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 gctgggccctggcgaccttg 246 |||||||||||||||||||| Sbjct: 84619 gctgggccctggcgaccttg 84600
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 tgaccttgccgtccttgacc 315 |||||||||||||||||||| Sbjct: 3687086 tgaccttgccgtccttgacc 3687067
>gb|AF195953.2| Homo sapiens membrane-bound aminopeptidase P (XNPEP2) gene, complete cds Length = 206618 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 669 gaggccttgtcagtggcctg 688 |||||||||||||||||||| Sbjct: 164680 gaggccttgtcagtggcctg 164661
>ref|NM_174626.2| Bos taurus thioredoxin reductase 2 (TXNRD2), mRNA Length = 1763 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 574 gccacatcaccgatggcata 593 |||||||||||||||||||| Sbjct: 1058 gccacatcaccgatggcata 1039
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 699 caacgatgaccatgtcggcatcga 722 |||||||||||||| ||||||||| Sbjct: 2818609 caacgatgaccatgacggcatcga 2818586
>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence Length = 3288558 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 488 cctttactgcctgctcggcc 507 |||||||||||||||||||| Sbjct: 285008 cctttactgcctgctcggcc 284989
>dbj|AB096202.1| Cercopithecine herpesvirus 1 UL21, UL20, UL19, UL18, UL15 genes for tegument protein, integral membrane protein, major capsid protein, capsid protein, DNA packaging protein, partial and complete cds, genotypes: BVlt Length = 7985 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 198 ggcgagcgcctccacgtcggccac 221 ||||||||||||||||| |||||| Sbjct: 4291 ggcgagcgcctccacgtgggccac 4268
>dbj|AB096201.1| Cercopithecine herpesvirus 1 UL21, UL20, UL19, UL18, UL15 genes for tegument protein, integral membrane protein, major capsid protein, capsid protein, DNA packaging protein, partial and complete cds, genotypes: BVpt Length = 7910 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 198 ggcgagcgcctccacgtcggccac 221 ||||||||||||||||| |||||| Sbjct: 4299 ggcgagcgcctccacgtgggccac 4276
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 cgatgaccttgccgtccttg 312 |||||||||||||||||||| Sbjct: 420412 cgatgaccttgccgtccttg 420431
>dbj|AB022283.1| Bos taurus mRNA for thioredoxin reductase, complete cds Length = 1763 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 574 gccacatcaccgatggcata 593 |||||||||||||||||||| Sbjct: 1058 gccacatcaccgatggcata 1039 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,414,896 Number of Sequences: 3902068 Number of extensions: 4414896 Number of successful extensions: 86569 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 70 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 85607 Number of HSP's gapped (non-prelim): 944 length of query: 728 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 705 effective length of database: 17,143,297,704 effective search space: 12086024881320 effective search space used: 12086024881320 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)