Clone Name	rbasd27j22
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AB027572.1| Triticum aestivum chloroplast DNA, 21.1-kb fragm...	1061	0.0
2	dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome	1061	0.0
3	gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast,...	918	0.0
4	dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete ...	918	0.0
5	gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-1...	910	0.0
6	emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome	910	0.0
7	emb|X17318.1|CLZMRPB Zea mays chloroplast trnC gene, rpoB gene, ...	910	0.0
8	gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome...	910	0.0
9	gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar N...	910	0.0
10	dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...	910	0.0
11	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	910	0.0
12	dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic D...	910	0.0
13	gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome	910	0.0
14	gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...	910	0.0
15	gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar N...	902	0.0
16	gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA...	902	0.0
17	emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chlor...	902	0.0
18	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	902	0.0
19	dbj|AP005408.2| Oryza sativa (japonica cultivar-group) genomic D...	902	0.0
20	dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome	902	0.0
21	emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4,...	894	0.0
22	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	894	0.0
23	gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome...	884	0.0
24	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	884	0.0
25	emb|X52270.1|CHZMATPI Maize chloroplast 3'part of rpoC2 gene, rp...	753	0.0
26	gb|DQ069545.1| Typha latifolia RNA polymerase beta'' chain (rpoC...	656	0.0
27	emb|AJ222797.1|CHMSINTER Miscanthus sinensis chloroplast DNA rpo...	642	0.0
28	gb|DQ069546.1| Yucca schidigera RNA polymerase beta'' chain (rpo...	575	e-161
29	gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, ...	553	e-154
30	dbj|AK062380.1| Oryza sativa (japonica cultivar-group) cDNA clon...	458	e-125
31	emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complet...	454	e-124
32	gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloropl...	402	e-109
33	emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast ...	400	e-108
34	gb|AY521596.1| Cucumis sativus isolate GY-14, chloroplast sequence	383	e-103
35	emb|AJ970307.1| Cucumis sativus chloroplast complete genome	383	e-103
36	gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid...	383	e-103
37	gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, ...	379	e-102
38	gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, comple...	375	e-100
39	gb|AY582139.1| Panax ginseng chloroplast, complete genome	367	3e-98
40	gb|DQ069541.1| Acorus americanus RNA polymerase beta'' chain (rp...	359	7e-96
41	emb|AJ879453.1| Acorus calamus chloroplast, complete genome	359	7e-96
42	gb|AC093544.8| Medicago truncatula chloroplast, complete genome,...	357	3e-95
43	emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome	355	1e-94
44	gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloropla...	355	1e-94
45	gb|DQ069543.1| Nuphar advena RNA polymerase beta'' chain (rpoC2)...	353	4e-94
46	gb|AY757830.1|AY757829S2 Acorus gramineus RpoC2 (rpoC2) gene, pa...	351	2e-93
47	gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast...	351	2e-93
48	emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast ...	347	3e-92
49	gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, c...	347	3e-92
50	gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, ...	347	3e-92
51	dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, compl...	347	3e-92
52	gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome	347	3e-92
53	gb|DQ069544.1| Ranunculus macranthus RNA polymerase beta'' chain...	339	6e-90
54	emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA	339	6e-90
55	dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete s...	339	6e-90
56	emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloropl...	331	2e-87
57	gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, comp...	327	2e-86
58	gb|AY865171.1| Lactuca sativa chloroplast inversion region	327	2e-86
59	dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequen...	327	2e-86
60	dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome	327	2e-86
61	emb|AJ627251.1| Nymphaea alba chloroplast, complete genome	325	1e-85
62	gb|AC146587.20| Medicago truncatula clone mth2-144j8, complete s...	323	4e-85
63	emb|X03912.1|CHPSATPA Pea chloroplast DNA (4.7 kb) 5' to ATP-syn...	309	6e-81
64	gb|AC145457.1| Cicer arietinum strain FLIP84-92C clone gl1-40c9,...	309	6e-81
65	dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, co...	303	4e-79
66	gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence	287	2e-74
67	emb|AJ243754.2|SAL243754 Sinapis alba chloroplast rpoB operon (r...	280	5e-72
68	dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome	272	1e-69
69	gb|AF289093.1| Glycine max chloroplast rpoBC gene cluster, compl...	228	2e-56
70	dbj|AB098212.1| Nicotiana sylvestris rpoC2 gene for RNA polymera...	228	2e-56
71	gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, compl...	228	2e-56
72	dbj|AB098233.1| Nicotiana tomentosiformis rpoC2 gene for RNA pol...	226	7e-56
73	gb|DQ167399.1| Oryza sativa (indica cultivar-group) isolate 93-1...	184	2e-43
74	gb|DQ167807.1| Oryza sativa (japonica cultivar-group) isolate PA...	184	2e-43
75	gb|DQ167400.1| Oryza sativa (japonica cultivar-group) cultivar N...	184	2e-43
76	dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochond...	184	2e-43
77	dbj|AP004576.1| Lotus japonicus genomic DNA, chromosome 2, clone...	178	1e-41
78	emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomi...	174	2e-40
79	emb|AJ391748.1|VME391748 Vicia melanops genomic repetitive eleme...	145	2e-31
80	dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complet...	141	3e-30
81	gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome	133	7e-28
82	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	119	1e-23
83	gb|AC146619.1| Genomic sequence for Oryza sativa, Nipponbare str...	119	1e-23
84	gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbare str...	119	1e-23
85	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	119	1e-23
86	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	119	1e-23
87	dbj|AP004666.4| Oryza sativa (japonica cultivar-group) genomic D...	119	1e-23
88	dbj|AP002054.1| Arabidopsis thaliana genomic DNA, chromosome 3, ...	119	1e-23
89	gb|DQ069542.1| Ginkgo biloba RNA polymerase beta'' chain (rpoC2)...	117	4e-23
90	dbj|AP004461.3| Oryza sativa (japonica cultivar-group) genomic D...	113	7e-22
91	dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast ...	111	3e-21
92	gb|AC146310.2| Oryza sativa (japonica cultivar-group) chromosome...	107	4e-20
93	gb|AC079935.3| Genomic sequence for Oryza sativa (japonica culti...	107	4e-20
94	dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome	96	2e-16
95	dbj|AB087420.1| Anthoceros formosae chloroplast rpoC2 mRNA for R...	86	2e-13
96	gb|AC136501.2| Oryza sativa (japonica cultivar-group) chromosome...	84	6e-13
97	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	84	6e-13
98	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	84	6e-13
99	gb|DQ279899.1| Crithopsis delileana translation initiation facto...	82	2e-12
100	dbj|AB029695.1| Abies veitchii DNA, rpoC2 gene for RNA polymeras...	82	2e-12
101	dbj|AB029694.1| Abies sibirica DNA, rpoC2 gene for RNA polymeras...	82	2e-12
102	dbj|AB029693.1| Abies sachalinensis DNA, rpoC2 gene for RNA poly...	82	2e-12
103	dbj|AB029692.1| Abies nephrolepis DNA, rpoC2 gene for RNA polyme...	82	2e-12
104	dbj|AB029691.1| Abies mariesii DNA, rpoC2 gene for RNA polymeras...	82	2e-12
105	dbj|AB029690.1| Abies lasiocarpa DNA, rpoC2 gene for RNA polymer...	82	2e-12
106	dbj|AB029689.1| Abies koreana DNA, rpoC2 gene for RNA polymerase...	82	2e-12
107	dbj|AB029688.1| Abies homolepis DNA, rpoC2 gene for RNA polymera...	82	2e-12
108	dbj|AB029687.1| Abies holophylla DNA, rpoC2 gene for RNA polymer...	82	2e-12
109	dbj|AB029686.1| Abies fraseri DNA, rpoC2 gene for RNA polymerase...	82	2e-12
110	dbj|AB029685.1| Abies firma DNA, rpoC2 gene for RNA polymerase b...	82	2e-12
111	dbj|AB029684.1| Abies fargesii DNA, rpoC2 gene for RNA polymeras...	82	2e-12
112	dbj|AB029683.1| Abies fabri DNA, rpoC2 gene for RNA polymerase b...	82	2e-12
113	dbj|AB077118.1| Prunus persica mRNA, microsatellite marker MA004b	78	4e-11
114	dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...	78	4e-11
115	dbj|AP005659.2| Oryza sativa (japonica cultivar-group) genomic D...	78	4e-11
116	gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete g...	70	9e-09
117	dbj|AB206662.1| Symplocarpus nabekuraensis chloroplast rps2, rpo...	68	4e-08
118	dbj|AB206660.1| Symplocarpus foetidus chloroplast rps2, rpoC2 ge...	68	4e-08
119	dbj|AB206659.1| Lysichiton camtschatcensis chloroplast rps2, rpo...	68	4e-08
120	emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA	66	1e-07
121	emb|X70810.2|CLEGCGA Euglena gracilis chloroplast complete genome	62	2e-06
122	emb|X17191.1|CHEGRPO E.gracilis chloroplast RNA polymerase rpoB-...	62	2e-06
123	gb|M22010.1|EGRCPRPS Euglena gracilis chloroplast ribosomal prot...	62	2e-06
124	emb|V00160.1|CHEGTN E. gracilis genes for val, asn, arg and leu ...	62	2e-06
125	dbj|AB206661.1| Symplocarpus nipponicus chloroplast rps2, rpoC2 ...	60	9e-06
126	gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, comple...	52	0.002
127	gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome	52	0.002
128	gb|AC091680.7| Oryza sativa chromosome 10 BAC OSJNBa0034L04 geno...	50	0.009
129	gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 gen...	50	0.009
130	ref|NM_197459.1| Oryza sativa (japonica cultivar-group) RNA poly...	48	0.034
131	gb|DQ160111.1| Taraxacum officinale TO73-1 (To73-1) mRNA, partia...	44	0.53
132	gb|AC116875.10| Mus musculus chromosome 8, clone RP24-426B21, co...	42	2.1
133	emb|AL035469.7|HS46B1 Human DNA sequence from clone RP1-46B1 on ...	42	2.1
134	dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ...	42	2.1
135	gb|AY363680.1| Yersinia aldovae urease gene locus, and Yut (yut)...	40	8.3
136	gb|AC005249.2| Homo sapiens BAC clone GS1-115J1 from 7, complete...	40	8.3
137	gb|AC145519.1| Pan troglodytes BAC clone RP43-32M13 from 7, comp...	40	8.3
138	emb|AL732437.12| Human DNA sequence from clone RP11-116G8 on chr...	40	8.3
139	gb|AY299195.1| Chenopodium rubrum ribosomal protein S2 and ATPas...	40	8.3
140	dbj|AK128534.1| Homo sapiens cDNA FLJ46692 fis, clone TRACH3012718	40	8.3
141	gb|AC108037.3| Homo sapiens BAC clone RP11-168E17 from 4, comple...	40	8.3
142	gb|AC093565.4| Homo sapiens chromosome 1 clone RP5-1033H14, comp...	40	8.3
143	gb|AC016647.7| Homo sapiens chromosome 16 clone RP11-89G14, comp...	40	8.3
144	emb|AL132952.1|CEY51H4A Caenorhabditis elegans YAC Y51H4A, compl...	40	8.3
145	gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete ...	40	8.3
146	gb|AC087362.13| Homo sapiens chromosome 8, clone RP11-513D5, com...	40	8.3
147	emb|AL831877.1|HSM803202 Homo sapiens mRNA; cDNA DKFZp547H1510 (...	40	8.3
148	dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome	40	8.3

---

>dbj|AB027572.1| Triticum aestivum chloroplast DNA, 21.1-kb fragment bearing RNA
             polymerase subunit (rpo) genes
          Length = 21245

 Score = 1061 bits (535), Expect = 0.0
 Identities = 587/609 (96%), Gaps = 1/609 (0%)
 Strand = Plus / Minus

                                                                         
Query: 1     gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtacca-caggtataat 59
             ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 18405 gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtaccaacaggtataat 18346

                                                                         
Query: 60    nnnnnnnagaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggc 119
                    |||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 18345 cccccccagaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtagggc 18286

                                                                         
Query: 120   agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 179
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18285 agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 18226

                                                                         
Query: 180   attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatccaa 239
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18225 attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatccaa 18166

                                                                         
Query: 240   agctcgccctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncatt 299
             |||||||||||||||||||||||||||||||||||||||||||||||||       ||||
Sbjct: 18165 agctcgccctgctcgttccgctcgcaatagtccgattaattccccaggcgaaaaaacatt 18106

                                                                         
Query: 300   agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 359
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18105 agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 18046

                                                                         
Query: 360   atgtctattatggatctgtaccccttgggatcgataaacctttnggattttattaaccaa 419
             ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 18045 atgtctattatggatctgtaccccttgggatcgataaaccttttggattttattaaccaa 17986

                                                                         
Query: 420   agaaatacgactttgggctatggttagctcagctccaatcaagaatccccaagggacccc 479
             ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17985 agagatacgactttgggctatggttagctcagctccaatcaagaatccccaagggacccc 17926

                                                                         
Query: 480   aagaattcttggnatacgctcattccaatcctcaattctcctttcgagattgggggataa 539
             |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 17925 aagaattcttggtatacgctcattccaatcctcaattctcctttcgagattcggggataa 17866

                                                                         
Query: 540   tgaatcaattgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttatgcc 599
             |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 17865 tgaatcaattgaacgcgcttcaaagatttgttccacttttggaagaccttgcgttatgtc 17806

                      
Query: 600   actagatct 608
             |||||||||
Sbjct: 17805 actagatct 17797

---

>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome
          Length = 134545

 Score = 1061 bits (535), Expect = 0.0
 Identities = 587/609 (96%), Gaps = 1/609 (0%)
 Strand = Plus / Minus

                                                                         
Query: 1     gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtacca-caggtataat 59
             ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 29759 gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtaccaacaggtataat 29700

                                                                         
Query: 60    nnnnnnnagaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggc 119
                    |||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 29699 cccccccagaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtagggc 29640

                                                                         
Query: 120   agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 179
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29639 agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 29580

                                                                         
Query: 180   attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatccaa 239
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29579 attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatccaa 29520

                                                                         
Query: 240   agctcgccctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncatt 299
             |||||||||||||||||||||||||||||||||||||||||||||||||       ||||
Sbjct: 29519 agctcgccctgctcgttccgctcgcaatagtccgattaattccccaggcgaaaaaacatt 29460

                                                                         
Query: 300   agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 359
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29459 agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 29400

                                                                         
Query: 360   atgtctattatggatctgtaccccttgggatcgataaacctttnggattttattaaccaa 419
             ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 29399 atgtctattatggatctgtaccccttgggatcgataaaccttttggattttattaaccaa 29340

                                                                         
Query: 420   agaaatacgactttgggctatggttagctcagctccaatcaagaatccccaagggacccc 479
             ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29339 agagatacgactttgggctatggttagctcagctccaatcaagaatccccaagggacccc 29280

                                                                         
Query: 480   aagaattcttggnatacgctcattccaatcctcaattctcctttcgagattgggggataa 539
             |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 29279 aagaattcttggtatacgctcattccaatcctcaattctcctttcgagattcggggataa 29220

                                                                         
Query: 540   tgaatcaattgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttatgcc 599
             |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 29219 tgaatcaattgaacgcgcttcaaagatttgttccacttttggaagaccttgcgttatgtc 29160

                      
Query: 600   actagatct 608
             |||||||||
Sbjct: 29159 actagatct 29151

---

>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome
          Length = 141182

 Score =  918 bits (463), Expect = 0.0
 Identities = 560/597 (93%), Gaps = 1/597 (0%)
 Strand = Plus / Minus

                                                                         
Query: 1     gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtacca-caggtataat 59
             ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 93514 gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtaccaacaggtataat 93455

                                                                         
Query: 60    nnnnnnnagaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggc 119
                    ||||||||||||||||||| |||||||||||||||||| ||||||||| ||||
Sbjct: 93454 cccccccagaactacgttttctttcaggcctttcaaccaatcaatacgacctcgtagggc 93395

                                                                         
Query: 120   agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 179
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93394 agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 93335

                                                                         
Query: 180   attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatccaa 239
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 93334 attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatctaa 93275

                                                                         
Query: 240   agctcgccctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncatt 299
             ||| ||||||||||||||||||||||||||||| ||||||||||||||        ||||
Sbjct: 93274 agcccgccctgctcgttccgctcgcaatagtcctattaattccccaggtaaaaaaacatt 93215

                                                                         
Query: 300   agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 359
             |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||
Sbjct: 93214 agacattccatcttcggaaacccttacttttgatgttacttggcgtataataatctctat 93155

                                                                         
Query: 360   atgtctattatggatctgtaccccttgggatcgataaacctttnggattttattaaccaa 419
             ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 93154 atgtctattatggatctgtaccccttgggatcgataaaccttttggatcttattaaccaa 93095

                                                                         
Query: 420   agaaatacgactttgggctatggttagctcagctccaatcaagaatccccaagggacccc 479
             ||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 93094 agagatacgactttgggctatggttagctcagctccaatcaagaatccccagggaacccc 93035

                                                                         
Query: 480   aagaattcttggnatacgctcattccaatcctcaattctcctttcgagattgggggataa 539
             |||||||||||| ||||| |||||||||||||||||||||||||||||||| || |||| 
Sbjct: 93034 aagaattcttggtatacgttcattccaatcctcaattctcctttcgagattcggcgatag 92975

                                                                      
Query: 540   tgaatcaattgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttat 596
             ||||||||||||||||||||| |||||||| || |||||||||||||||||||||||
Sbjct: 92974 tgaatcaattgaacgcgcttcgaagatttgttctacttttggaagaccttgcgttat 92918

---

>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome
          Length = 141182

 Score =  918 bits (463), Expect = 0.0
 Identities = 560/597 (93%), Gaps = 1/597 (0%)
 Strand = Plus / Minus

                                                                         
Query: 1     gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtacca-caggtataat 59
             ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 31887 gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtaccaacaggtataat 31828

                                                                         
Query: 60    nnnnnnnagaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggc 119
                    ||||||||||||||||||| |||||||||||||||||| ||||||||| ||||
Sbjct: 31827 cccccccagaactacgttttctttcaggcctttcaaccaatcaatacgacctcgtagggc 31768

                                                                         
Query: 120   agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 179
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31767 agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 31708

                                                                         
Query: 180   attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatccaa 239
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 31707 attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatctaa 31648

                                                                         
Query: 240   agctcgccctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncatt 299
             ||| ||||||||||||||||||||||||||||| ||||||||||||||        ||||
Sbjct: 31647 agcccgccctgctcgttccgctcgcaatagtcctattaattccccaggtaaaaaaacatt 31588

                                                                         
Query: 300   agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 359
             |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||
Sbjct: 31587 agacattccatcttcggaaacccttacttttgatgttacttggcgtataataatctctat 31528

                                                                         
Query: 360   atgtctattatggatctgtaccccttgggatcgataaacctttnggattttattaaccaa 419
             ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 31527 atgtctattatggatctgtaccccttgggatcgataaaccttttggatcttattaaccaa 31468

                                                                         
Query: 420   agaaatacgactttgggctatggttagctcagctccaatcaagaatccccaagggacccc 479
             ||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 31467 agagatacgactttgggctatggttagctcagctccaatcaagaatccccagggaacccc 31408

                                                                         
Query: 480   aagaattcttggnatacgctcattccaatcctcaattctcctttcgagattgggggataa 539
             |||||||||||| ||||| |||||||||||||||||||||||||||||||| || |||| 
Sbjct: 31407 aagaattcttggtatacgttcattccaatcctcaattctcctttcgagattcggcgatag 31348

                                                                      
Query: 540   tgaatcaattgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttat 596
             ||||||||||||||||||||| |||||||| || |||||||||||||||||||||||
Sbjct: 31347 tgaatcaattgaacgcgcttcgaagatttgttctacttttggaagaccttgcgttat 31291

---

>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast,
             complete genome
          Length = 134496

 Score =  910 bits (459), Expect = 0.0
 Identities = 568/609 (93%), Gaps = 1/609 (0%)
 Strand = Plus / Minus

                                                                         
Query: 1     gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtacca-caggtataat 59
             |||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 29081 gttcttgtcttgtgggtaacggtgcacaaatttttggaatccggtaccaacaggtataat 29022

                                                                         
Query: 60    nnnnnnnagaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggc 119
                    ||||||||||||||||||| |||||||||||||||||| |||||||||  |||
Sbjct: 29021 cccccccagaactacgttttctttcaggcctttcaaccaatcaatacgacctcgtaaggc 28962

                                                                         
Query: 120   agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 179
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28961 agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 28902

                                                                         
Query: 180   attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatccaa 239
             |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28901 attcagggaaacccttgttattcccaataagattgcccgataatagatcgattcatccaa 28842

                                                                         
Query: 240   agctcgccctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncatt 299
             ||| ||||||||||| || |||||||||||||| ||||||||||||||        ||||
Sbjct: 28841 agcccgccctgctcgctctgctcgcaatagtccaattaattccccaggtgaaaaaacatt 28782

                                                                         
Query: 300   agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 359
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28781 agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 28722

                                                                         
Query: 360   atgtctattatggatctgtaccccttgggatcgataaacctttnggattttattaaccaa 419
             ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 28721 atgtctattatggatctgtaccccttgggatcgataaaccttttggatcttattaaccaa 28662

                                                                         
Query: 420   agaaatacgactttgggctatggttagctcagctccaatcaagaatccccaagggacccc 479
             ||| |||||||||||||||||||||| |||||||||||||||||||||||||||  ||||
Sbjct: 28661 agagatacgactttgggctatggttaactcagctccaatcaagaatccccaaggaccccc 28602

                                                                         
Query: 480   aagaattcttggnatacgctcattccaatcctcaattctcctttcgagattgggggataa 539
             |||||||||||| |||||||||||||||||||||||||||||||||||||| || |||| 
Sbjct: 28601 aagaattcttggtatacgctcattccaatcctcaattctcctttcgagattcggcgatag 28542

                                                                         
Query: 540   tgaatcaattgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttatgcc 599
             ||||||||||||||||||||| |||||||| || |||||||||||||||||||||||| |
Sbjct: 28541 tgaatcaattgaacgcgcttcgaagatttgttctacttttggaagaccttgcgttatgtc 28482

                      
Query: 600   actagatct 608
             |||||||||
Sbjct: 28481 actagatct 28473

---

>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome
          Length = 140384

 Score =  910 bits (459), Expect = 0.0
 Identities = 559/597 (93%), Gaps = 1/597 (0%)
 Strand = Plus / Minus

                                                                         
Query: 1     gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtacca-caggtataat 59
             ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 31413 gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtaccaacaggtataat 31354

                                                                         
Query: 60    nnnnnnnagaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggc 119
                    |||||||||||||||||||  ||||||||||||||||| ||||||||| ||||
Sbjct: 31353 cccccccagaactacgttttctttcagacctttcaaccaatcaatacgacctcgtagggc 31294

                                                                         
Query: 120   agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 179
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31293 agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 31234

                                                                         
Query: 180   attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatccaa 239
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 31233 attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatctaa 31174

                                                                         
Query: 240   agctcgccctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncatt 299
             ||| ||||||||||||||||||||||||||||| ||||||||||||||        ||||
Sbjct: 31173 agcccgccctgctcgttccgctcgcaatagtcctattaattccccaggtaaaaaaacatt 31114

                                                                         
Query: 300   agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 359
             |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||
Sbjct: 31113 agacattccatcttcggaaacccttacttttgatgttacttggcgtataataatctctat 31054

                                                                         
Query: 360   atgtctattatggatctgtaccccttgggatcgataaacctttnggattttattaaccaa 419
             ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 31053 atgtctattatggatctgtaccccttgggatcgataaaccttttggatcttattaaccaa 30994

                                                                         
Query: 420   agaaatacgactttgggctatggttagctcagctccaatcaagaatccccaagggacccc 479
             ||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 30993 agagatacgactttgggctatggttagctcagctccaatcaagaatccccagggaacccc 30934

                                                                         
Query: 480   aagaattcttggnatacgctcattccaatcctcaattctcctttcgagattgggggataa 539
             |||||||||||| ||||| |||||||||||||||||||||||||||||||| || |||| 
Sbjct: 30933 aagaattcttggtatacgttcattccaatcctcaattctcctttcgagattcggcgatag 30874

                                                                      
Query: 540   tgaatcaattgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttat 596
             ||||||||||||||||||||| |||||||| || |||||||||||||||||||||||
Sbjct: 30873 tgaatcaattgaacgcgcttcgaagatttgttctacttttggaagaccttgcgttat 30817

---

>emb|X17318.1|CLZMRPB Zea mays chloroplast trnC gene, rpoB gene, rpoC1 gene, rpoC2 gene and
             rps2 gene for transfer RNA-Cys, RNA polymerase subunits
             beta, beta-1, beta-2 and ribosomal protein S2 respectively
          Length = 12503

 Score =  910 bits (459), Expect = 0.0
 Identities = 559/597 (93%), Gaps = 1/597 (0%)
 Strand = Plus / Minus

                                                                         
Query: 1     gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtacca-caggtataat 59
             ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 11327 gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtaccaacaggtataat 11268

                                                                         
Query: 60    nnnnnnnagaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggc 119
                    |||||||||||||||||||  ||||||||||||||||| ||||||||| ||||
Sbjct: 11267 cccccccagaactacgttttctttcagacctttcaaccaatcaatacgacctcgtagggc 11208

                                                                         
Query: 120   agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 179
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11207 agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 11148

                                                                         
Query: 180   attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatccaa 239
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 11147 attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatctaa 11088

                                                                         
Query: 240   agctcgccctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncatt 299
             ||| ||||||||||||||||||||||||||||| ||||||||||||||        ||||
Sbjct: 11087 agcccgccctgctcgttccgctcgcaatagtcctattaattccccaggtaaaaaaacatt 11028

                                                                         
Query: 300   agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 359
             |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||
Sbjct: 11027 agacattccatcttcggaaacccttacttttgatgttacttggcgtataataatctctat 10968

                                                                         
Query: 360   atgtctattatggatctgtaccccttgggatcgataaacctttnggattttattaaccaa 419
             ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 10967 atgtctattatggatctgtaccccttgggatcgataaaccttttggatcttattaaccaa 10908

                                                                         
Query: 420   agaaatacgactttgggctatggttagctcagctccaatcaagaatccccaagggacccc 479
             ||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 10907 agagatacgactttgggctatggttagctcagctccaatcaagaatccccagggaacccc 10848

                                                                         
Query: 480   aagaattcttggnatacgctcattccaatcctcaattctcctttcgagattgggggataa 539
             |||||||||||| ||||| |||||||||||||||||||||||||||||||| || |||| 
Sbjct: 10847 aagaattcttggtatacgttcattccaatcctcaattctcctttcgagattcggcgatag 10788

                                                                      
Query: 540   tgaatcaattgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttat 596
             ||||||||||||||||||||| |||||||| || |||||||||||||||||||||||
Sbjct: 10787 tgaatcaattgaacgcgcttcgaagatttgttctacttttggaagaccttgcgttat 10731

---

>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0075K12, complete sequence
          Length = 125936

 Score =  910 bits (459), Expect = 0.0
 Identities = 568/609 (93%), Gaps = 1/609 (0%)
 Strand = Plus / Minus

                                                                         
Query: 1     gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtacca-caggtataat 59
             |||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 27337 gttcttgtcttgtgggtaacggtgcacaaatttttggaatccggtaccaacaggtataat 27278

                                                                         
Query: 60    nnnnnnnagaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggc 119
                    ||||||||||||||||||| |||||||||||||||||| |||||||||  |||
Sbjct: 27277 cccccccagaactacgttttctttcaggcctttcaaccaatcaatacgacctcgtaaggc 27218

                                                                         
Query: 120   agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 179
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27217 agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 27158

                                                                         
Query: 180   attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatccaa 239
             |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27157 attcagggaaacccttgttattcccaataagattgcccgataatagatcgattcatccaa 27098

                                                                         
Query: 240   agctcgccctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncatt 299
             ||| ||||||||||| || |||||||||||||| ||||||||||||||        ||||
Sbjct: 27097 agcccgccctgctcgctctgctcgcaatagtccaattaattccccaggtgaaaaaacatt 27038

                                                                         
Query: 300   agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 359
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27037 agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 26978

                                                                         
Query: 360   atgtctattatggatctgtaccccttgggatcgataaacctttnggattttattaaccaa 419
             ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 26977 atgtctattatggatctgtaccccttgggatcgataaaccttttggatcttattaaccaa 26918

                                                                         
Query: 420   agaaatacgactttgggctatggttagctcagctccaatcaagaatccccaagggacccc 479
             ||| |||||||||||||||||||||| |||||||||||||||||||||||||||  ||||
Sbjct: 26917 agagatacgactttgggctatggttaactcagctccaatcaagaatccccaaggaccccc 26858

                                                                         
Query: 480   aagaattcttggnatacgctcattccaatcctcaattctcctttcgagattgggggataa 539
             |||||||||||| |||||||||||||||||||||||||||||||||||||| || |||| 
Sbjct: 26857 aagaattcttggtatacgctcattccaatcctcaattctcctttcgagattcggcgatag 26798

                                                                         
Query: 540   tgaatcaattgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttatgcc 599
             ||||||||||||||||||||| |||||||| || |||||||||||||||||||||||| |
Sbjct: 26797 tgaatcaattgaacgcgcttcgaagatttgttctacttttggaagaccttgcgttatgtc 26738

                      
Query: 600   actagatct 608
             |||||||||
Sbjct: 26737 actagatct 26729

---

>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from
              chromosome 10, complete sequence
          Length = 134933

 Score =  910 bits (459), Expect = 0.0
 Identities = 568/609 (93%), Gaps = 1/609 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtacca-caggtataat 59
              |||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 102270 gttcttgtcttgtgggtaacggtgcacaaatttttggaatccggtaccaacaggtataat 102211

                                                                          
Query: 60     nnnnnnnagaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggc 119
                     ||||||||||||||||||| |||||||||||||||||| |||||||||  |||
Sbjct: 102210 cccccccagaactacgttttctttcaggcctttcaaccaatcaatacgacctcgtaaggc 102151

                                                                          
Query: 120    agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 179
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102150 agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 102091

                                                                          
Query: 180    attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatccaa 239
              |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102090 attcagggaaacccttgttattcccaataagattgcccgataatagatcgattcatccaa 102031

                                                                          
Query: 240    agctcgccctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncatt 299
              ||| ||||||||||| || |||||||||||||| ||||||||||||||        ||||
Sbjct: 102030 agcccgccctgctcgctctgctcgcaatagtccaattaattccccaggtgaaaaaacatt 101971

                                                                          
Query: 300    agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 359
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101970 agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 101911

                                                                          
Query: 360    atgtctattatggatctgtaccccttgggatcgataaacctttnggattttattaaccaa 419
              ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 101910 atgtctattatggatctgtaccccttgggatcgataaaccttttggatcttattaaccaa 101851

                                                                          
Query: 420    agaaatacgactttgggctatggttagctcagctccaatcaagaatccccaagggacccc 479
              ||| |||||||||||||||||||||| |||||||||||||||||||||||||||  ||||
Sbjct: 101850 agagatacgactttgggctatggttaactcagctccaatcaagaatccccaaggaccccc 101791

                                                                          
Query: 480    aagaattcttggnatacgctcattccaatcctcaattctcctttcgagattgggggataa 539
              |||||||||||| |||||||||||||||||||||||||||||||||||||| || |||| 
Sbjct: 101790 aagaattcttggtatacgctcattccaatcctcaattctcctttcgagattcggcgatag 101731

                                                                          
Query: 540    tgaatcaattgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttatgcc 599
              ||||||||||||||||||||| |||||||| || |||||||||||||||||||||||| |
Sbjct: 101730 tgaatcaattgaacgcgcttcgaagatttgttctacttttggaagaccttgcgttatgtc 101671

                       
Query: 600    actagatct 608
              |||||||||
Sbjct: 101670 actagatct 101662

---

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  910 bits (459), Expect = 0.0
 Identities = 568/609 (93%), Gaps = 1/609 (0%)
 Strand = Plus / Minus

                                                                            
Query: 1        gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtacca-caggtataat 59
                |||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 10320945 gttcttgtcttgtgggtaacggtgcacaaatttttggaatccggtaccaacaggtataat 10320886

                                                                            
Query: 60       nnnnnnnagaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggc 119
                       ||||||||||||||||||| |||||||||||||||||| |||||||||  |||
Sbjct: 10320885 cccccccagaactacgttttctttcaggcctttcaaccaatcaatacgacctcgtaaggc 10320826

                                                                            
Query: 120      agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 179
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10320825 agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 10320766

                                                                            
Query: 180      attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatccaa 239
                |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10320765 attcagggaaacccttgttattcccaataagattgcccgataatagatcgattcatccaa 10320706

                                                                            
Query: 240      agctcgccctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncatt 299
                ||| ||||||||||| || |||||||||||||| ||||||||||||||        ||||
Sbjct: 10320705 agcccgccctgctcgctctgctcgcaatagtccaattaattccccaggtgaaaaaacatt 10320646

                                                                            
Query: 300      agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 359
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10320645 agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 10320586

                                                                            
Query: 360      atgtctattatggatctgtaccccttgggatcgataaacctttnggattttattaaccaa 419
                ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 10320585 atgtctattatggatctgtaccccttgggatcgataaaccttttggatcttattaaccaa 10320526

                                                                            
Query: 420      agaaatacgactttgggctatggttagctcagctccaatcaagaatccccaagggacccc 479
                ||| |||||||||||||||||||||| |||||||||||||||||||||||||||  ||||
Sbjct: 10320525 agagatacgactttgggctatggttaactcagctccaatcaagaatccccaaggaccccc 10320466

                                                                            
Query: 480      aagaattcttggnatacgctcattccaatcctcaattctcctttcgagattgggggataa 539
                |||||||||||| |||||||||||||||||||||||||||||||||||||| || |||| 
Sbjct: 10320465 aagaattcttggtatacgctcattccaatcctcaattctcctttcgagattcggcgatag 10320406

                                                                            
Query: 540      tgaatcaattgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttatgcc 599
                ||||||||||||||||||||| |||||||| || |||||||||||||||||||||||| |
Sbjct: 10320405 tgaatcaattgaacgcgcttcgaagatttgttctacttttggaagaccttgcgttatgtc 10320346

                         
Query: 600      actagatct 608
                |||||||||
Sbjct: 10320345 actagatct 10320337



 Score =  107 bits (54), Expect = 4e-20
 Identities = 80/89 (89%)
 Strand = Plus / Plus

                                                                            
Query: 518      tcctttcgagattgggggataatgaatcaattgaacgcgcttcaaagatttgntccactt 577
                |||||||||||||  | |||| ||||||||||||||||||||  |||||||| || ||||
Sbjct: 11556804 tcctttcgagattcagcgatagtgaatcaattgaacgcgctttgaagatttgttctactt 11556863

                                             
Query: 578      ttggaagaccttgcgttatgccactagat 606
                |||||||||||||||||||| ||||||||
Sbjct: 11556864 ttggaagaccttgcgttatgtcactagat 11556892



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                     
Query: 1        gttcttgtcttgtggggaacgatgcacaaatttttgg 37
                |||||||| ||||||| |||| |||||||||||||||
Sbjct: 19965478 gttcttgttttgtgggtaacggtgcacaaatttttgg 19965514

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  910 bits (459), Expect = 0.0
 Identities = 568/609 (93%), Gaps = 1/609 (0%)
 Strand = Plus / Plus

                                                                            
Query: 1        gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtacca-caggtataat 59
                |||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 33549177 gttcttgtcttgtgggtaacggtgcacaaatttttggaatccggtaccaacaggtataat 33549236

                                                                            
Query: 60       nnnnnnnagaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggc 119
                       ||||||||||||||||||| |||||||||||||||||| |||||||||  |||
Sbjct: 33549237 cccccccagaactacgttttctttcaggcctttcaaccaatcaatacgacctcgtaaggc 33549296

                                                                            
Query: 120      agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 179
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33549297 agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 33549356

                                                                            
Query: 180      attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatccaa 239
                |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33549357 attcagggaaacccttgttattcccaataagattgcccgataatagatcgattcatccaa 33549416

                                                                            
Query: 240      agctcgccctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncatt 299
                ||| ||||||||||| || |||||||||||||| ||||||||||||||        ||||
Sbjct: 33549417 agcccgccctgctcgctctgctcgcaatagtccaattaattccccaggtgaaaaaacatt 33549476

                                                                            
Query: 300      agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 359
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33549477 agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 33549536

                                                                            
Query: 360      atgtctattatggatctgtaccccttgggatcgataaacctttnggattttattaaccaa 419
                ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 33549537 atgtctattatggatctgtaccccttgggatcgataaaccttttggatcttattaaccaa 33549596

                                                                            
Query: 420      agaaatacgactttgggctatggttagctcagctccaatcaagaatccccaagggacccc 479
                ||| |||||||||||||||||||||| |||||||||||||||||||||||||||  ||||
Sbjct: 33549597 agagatacgactttgggctatggttaactcagctccaatcaagaatccccaaggaccccc 33549656

                                                                            
Query: 480      aagaattcttggnatacgctcattccaatcctcaattctcctttcgagattgggggataa 539
                |||||||||||| |||||||||||||||||||||||||||||||||||||| || |||| 
Sbjct: 33549657 aagaattcttggtatacgctcattccaatcctcaattctcctttcgagattcggcgatag 33549716

                                                                            
Query: 540      tgaatcaattgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttatgcc 599
                ||||||||||||||||||||| |||||||| || |||||||||||||||||||||||| |
Sbjct: 33549717 tgaatcaattgaacgcgcttcgaagatttgttctacttttggaagaccttgcgttatgtc 33549776

                         
Query: 600      actagatct 608
                |||||||||
Sbjct: 33549777 actagatct 33549785

---

>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0557A01
          Length = 147201

 Score =  910 bits (459), Expect = 0.0
 Identities = 568/609 (93%), Gaps = 1/609 (0%)
 Strand = Plus / Plus

                                                                         
Query: 1     gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtacca-caggtataat 59
             |||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 94374 gttcttgtcttgtgggtaacggtgcacaaatttttggaatccggtaccaacaggtataat 94433

                                                                         
Query: 60    nnnnnnnagaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggc 119
                    ||||||||||||||||||| |||||||||||||||||| |||||||||  |||
Sbjct: 94434 cccccccagaactacgttttctttcaggcctttcaaccaatcaatacgacctcgtaaggc 94493

                                                                         
Query: 120   agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 179
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94494 agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 94553

                                                                         
Query: 180   attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatccaa 239
             |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94554 attcagggaaacccttgttattcccaataagattgcccgataatagatcgattcatccaa 94613

                                                                         
Query: 240   agctcgccctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncatt 299
             ||| ||||||||||| || |||||||||||||| ||||||||||||||        ||||
Sbjct: 94614 agcccgccctgctcgctctgctcgcaatagtccaattaattccccaggtgaaaaaacatt 94673

                                                                         
Query: 300   agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 359
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94674 agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 94733

                                                                         
Query: 360   atgtctattatggatctgtaccccttgggatcgataaacctttnggattttattaaccaa 419
             ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 94734 atgtctattatggatctgtaccccttgggatcgataaaccttttggatcttattaaccaa 94793

                                                                         
Query: 420   agaaatacgactttgggctatggttagctcagctccaatcaagaatccccaagggacccc 479
             ||| |||||||||||||||||||||| |||||||||||||||||||||||||||  ||||
Sbjct: 94794 agagatacgactttgggctatggttaactcagctccaatcaagaatccccaaggaccccc 94853

                                                                         
Query: 480   aagaattcttggnatacgctcattccaatcctcaattctcctttcgagattgggggataa 539
             |||||||||||| |||||||||||||||||||||||||||||||||||||| || |||| 
Sbjct: 94854 aagaattcttggtatacgctcattccaatcctcaattctcctttcgagattcggcgatag 94913

                                                                         
Query: 540   tgaatcaattgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttatgcc 599
             ||||||||||||||||||||| |||||||| || |||||||||||||||||||||||| |
Sbjct: 94914 tgaatcaattgaacgcgcttcgaagatttgttctacttttggaagaccttgcgttatgtc 94973

                      
Query: 600   actagatct 608
             |||||||||
Sbjct: 94974 actagatct 94982

---

>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome
          Length = 140454

 Score =  910 bits (459), Expect = 0.0
 Identities = 559/597 (93%), Gaps = 1/597 (0%)
 Strand = Plus / Minus

                                                                         
Query: 1     gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtacca-caggtataat 59
             ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 31412 gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtaccaacaggtataat 31353

                                                                         
Query: 60    nnnnnnnagaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggc 119
                    |||||||||||||||||||  ||||||||||||||||| ||||||||| ||||
Sbjct: 31352 cccccccagaactacgttttctttcagacctttcaaccaatcaatacgacctcgtagggc 31293

                                                                         
Query: 120   agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 179
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31292 agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 31233

                                                                         
Query: 180   attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatccaa 239
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 31232 attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatctaa 31173

                                                                         
Query: 240   agctcgccctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncatt 299
             ||| ||||||||||||||||||||||||||||| ||||||||||||||        ||||
Sbjct: 31172 agcccgccctgctcgttccgctcgcaatagtcctattaattccccaggtaaaaaaacatt 31113

                                                                         
Query: 300   agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 359
             |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||
Sbjct: 31112 agacattccatcttcggaaacccttacttttgatgttacttggcgtataataatctctat 31053

                                                                         
Query: 360   atgtctattatggatctgtaccccttgggatcgataaacctttnggattttattaaccaa 419
             ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 31052 atgtctattatggatctgtaccccttgggatcgataaaccttttggatcttattaaccaa 30993

                                                                         
Query: 420   agaaatacgactttgggctatggttagctcagctccaatcaagaatccccaagggacccc 479
             ||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 30992 agagatacgactttgggctatggttagctcagctccaatcaagaatccccagggaacccc 30933

                                                                         
Query: 480   aagaattcttggnatacgctcattccaatcctcaattctcctttcgagattgggggataa 539
             |||||||||||| ||||| |||||||||||||||||||||||||||||||| || |||| 
Sbjct: 30932 aagaattcttggtatacgttcattccaatcctcaattctcctttcgagattcggcgatag 30873

                                                                      
Query: 540   tgaatcaattgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttat 596
             ||||||||||||||||||||| |||||||| || |||||||||||||||||||||||
Sbjct: 30872 tgaatcaattgaacgcgcttcgaagatttgttctacttttggaagaccttgcgttat 30816

---

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  910 bits (459), Expect = 0.0
 Identities = 568/609 (93%), Gaps = 1/609 (0%)
 Strand = Plus / Minus

                                                                            
Query: 1        gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtacca-caggtataat 59
                |||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 10326984 gttcttgtcttgtgggtaacggtgcacaaatttttggaatccggtaccaacaggtataat 10326925

                                                                            
Query: 60       nnnnnnnagaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggc 119
                       ||||||||||||||||||| |||||||||||||||||| |||||||||  |||
Sbjct: 10326924 cccccccagaactacgttttctttcaggcctttcaaccaatcaatacgacctcgtaaggc 10326865

                                                                            
Query: 120      agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 179
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10326864 agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 10326805

                                                                            
Query: 180      attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatccaa 239
                |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10326804 attcagggaaacccttgttattcccaataagattgcccgataatagatcgattcatccaa 10326745

                                                                            
Query: 240      agctcgccctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncatt 299
                ||| ||||||||||| || |||||||||||||| ||||||||||||||        ||||
Sbjct: 10326744 agcccgccctgctcgctctgctcgcaatagtccaattaattccccaggtgaaaaaacatt 10326685

                                                                            
Query: 300      agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 359
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10326684 agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 10326625

                                                                            
Query: 360      atgtctattatggatctgtaccccttgggatcgataaacctttnggattttattaaccaa 419
                ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 10326624 atgtctattatggatctgtaccccttgggatcgataaaccttttggatcttattaaccaa 10326565

                                                                            
Query: 420      agaaatacgactttgggctatggttagctcagctccaatcaagaatccccaagggacccc 479
                ||| |||||||||||||||||||||| |||||||||||||||||||||||||||  ||||
Sbjct: 10326564 agagatacgactttgggctatggttaactcagctccaatcaagaatccccaaggaccccc 10326505

                                                                            
Query: 480      aagaattcttggnatacgctcattccaatcctcaattctcctttcgagattgggggataa 539
                |||||||||||| |||||||||||||||||||||||||||||||||||||| || |||| 
Sbjct: 10326504 aagaattcttggtatacgctcattccaatcctcaattctcctttcgagattcggcgatag 10326445

                                                                            
Query: 540      tgaatcaattgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttatgcc 599
                ||||||||||||||||||||| |||||||| || |||||||||||||||||||||||| |
Sbjct: 10326444 tgaatcaattgaacgcgcttcgaagatttgttctacttttggaagaccttgcgttatgtc 10326385

                         
Query: 600      actagatct 608
                |||||||||
Sbjct: 10326384 actagatct 10326376



 Score =  107 bits (54), Expect = 4e-20
 Identities = 80/89 (89%)
 Strand = Plus / Plus

                                                                            
Query: 518      tcctttcgagattgggggataatgaatcaattgaacgcgcttcaaagatttgntccactt 577
                |||||||||||||  | |||| ||||||||||||||||||||  |||||||| || ||||
Sbjct: 11563244 tcctttcgagattcagcgatagtgaatcaattgaacgcgctttgaagatttgttctactt 11563303

                                             
Query: 578      ttggaagaccttgcgttatgccactagat 606
                |||||||||||||||||||| ||||||||
Sbjct: 11563304 ttggaagaccttgcgttatgtcactagat 11563332



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                     
Query: 1        gttcttgtcttgtggggaacgatgcacaaatttttgg 37
                |||||||| ||||||| |||| |||||||||||||||
Sbjct: 19976754 gttcttgttttgtgggtaacggtgcacaaatttttgg 19976790

---

>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast,
             complete genome
          Length = 134551

 Score =  902 bits (455), Expect = 0.0
 Identities = 567/609 (93%), Gaps = 1/609 (0%)
 Strand = Plus / Minus

                                                                         
Query: 1     gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtacca-caggtataat 59
             |||||||| ||||||| |||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 29123 gttcttgttttgtgggtaacggtgcacaaatttttggaatccggtaccaacaggtataat 29064

                                                                         
Query: 60    nnnnnnnagaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggc 119
                    ||||||||||||||||||| |||||||||||||||||| |||||||||  |||
Sbjct: 29063 cccccccagaactacgttttctttcaggcctttcaaccaatcaatacgacctcgtaaggc 29004

                                                                         
Query: 120   agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 179
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29003 agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 28944

                                                                         
Query: 180   attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatccaa 239
             |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28943 attcagggaaacccttgttattcccaataagattgcccgataatagatcgattcatccaa 28884

                                                                         
Query: 240   agctcgccctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncatt 299
             ||| ||||||||||| || |||||||||||||| ||||||||||||||        ||||
Sbjct: 28883 agcccgccctgctcgctctgctcgcaatagtccaattaattccccaggtgaaaaaacatt 28824

                                                                         
Query: 300   agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 359
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28823 agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 28764

                                                                         
Query: 360   atgtctattatggatctgtaccccttgggatcgataaacctttnggattttattaaccaa 419
             ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 28763 atgtctattatggatctgtaccccttgggatcgataaaccttttggatcttattaaccaa 28704

                                                                         
Query: 420   agaaatacgactttgggctatggttagctcagctccaatcaagaatccccaagggacccc 479
             ||| |||||||||||||||||||||| |||||||||||||||||||||||||||  ||||
Sbjct: 28703 agagatacgactttgggctatggttaactcagctccaatcaagaatccccaaggaccccc 28644

                                                                         
Query: 480   aagaattcttggnatacgctcattccaatcctcaattctcctttcgagattgggggataa 539
             |||||||||||| |||||||||||||||||||||||||||||||||||||| || |||| 
Sbjct: 28643 aagaattcttggtatacgctcattccaatcctcaattctcctttcgagattcggcgatag 28584

                                                                         
Query: 540   tgaatcaattgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttatgcc 599
             ||||||||||||||||||||| |||||||| || |||||||||||||||||||||||| |
Sbjct: 28583 tgaatcaattgaacgcgcttcgaagatttgttctacttttggaagaccttgcgttatgtc 28524

                      
Query: 600   actagatct 608
             |||||||||
Sbjct: 28523 actagatct 28515

---

>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast,
             complete genome
          Length = 134551

 Score =  902 bits (455), Expect = 0.0
 Identities = 567/609 (93%), Gaps = 1/609 (0%)
 Strand = Plus / Minus

                                                                         
Query: 1     gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtacca-caggtataat 59
             |||||||| ||||||| |||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 29123 gttcttgttttgtgggtaacggtgcacaaatttttggaatccggtaccaacaggtataat 29064

                                                                         
Query: 60    nnnnnnnagaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggc 119
                    ||||||||||||||||||| |||||||||||||||||| |||||||||  |||
Sbjct: 29063 cccccccagaactacgttttctttcaggcctttcaaccaatcaatacgacctcgtaaggc 29004

                                                                         
Query: 120   agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 179
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29003 agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 28944

                                                                         
Query: 180   attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatccaa 239
             |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28943 attcagggaaacccttgttattcccaataagattgcccgataatagatcgattcatccaa 28884

                                                                         
Query: 240   agctcgccctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncatt 299
             ||| ||||||||||| || |||||||||||||| ||||||||||||||        ||||
Sbjct: 28883 agcccgccctgctcgctctgctcgcaatagtccaattaattccccaggtgaaaaaacatt 28824

                                                                         
Query: 300   agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 359
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28823 agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 28764

                                                                         
Query: 360   atgtctattatggatctgtaccccttgggatcgataaacctttnggattttattaaccaa 419
             ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 28763 atgtctattatggatctgtaccccttgggatcgataaaccttttggatcttattaaccaa 28704

                                                                         
Query: 420   agaaatacgactttgggctatggttagctcagctccaatcaagaatccccaagggacccc 479
             ||| |||||||||||||||||||||| |||||||||||||||||||||||||||  ||||
Sbjct: 28703 agagatacgactttgggctatggttaactcagctccaatcaagaatccccaaggaccccc 28644

                                                                         
Query: 480   aagaattcttggnatacgctcattccaatcctcaattctcctttcgagattgggggataa 539
             |||||||||||| |||||||||||||||||||||||||||||||||||||| || |||| 
Sbjct: 28643 aagaattcttggtatacgctcattccaatcctcaattctcctttcgagattcggcgatag 28584

                                                                         
Query: 540   tgaatcaattgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttatgcc 599
             ||||||||||||||||||||| |||||||| || |||||||||||||||||||||||| |
Sbjct: 28583 tgaatcaattgaacgcgcttcgaagatttgttctacttttggaagaccttgcgttatgtc 28524

                      
Query: 600   actagatct 608
             |||||||||
Sbjct: 28523 actagatct 28515

---

>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome
          Length = 134525

 Score =  902 bits (455), Expect = 0.0
 Identities = 567/609 (93%), Gaps = 1/609 (0%)
 Strand = Plus / Minus

                                                                         
Query: 1     gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtacca-caggtataat 59
             |||||||| ||||||| |||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 29121 gttcttgttttgtgggtaacggtgcacaaatttttggaatccggtaccaacaggtataat 29062

                                                                         
Query: 60    nnnnnnnagaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggc 119
                    ||||||||||||||||||| |||||||||||||||||| |||||||||  |||
Sbjct: 29061 cccccccagaactacgttttctttcaggcctttcaaccaatcaatacgacctcgtaaggc 29002

                                                                         
Query: 120   agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 179
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29001 agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 28942

                                                                         
Query: 180   attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatccaa 239
             |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28941 attcagggaaacccttgttattcccaataagattgcccgataatagatcgattcatccaa 28882

                                                                         
Query: 240   agctcgccctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncatt 299
             ||| ||||||||||| || |||||||||||||| ||||||||||||||        ||||
Sbjct: 28881 agcccgccctgctcgctctgctcgcaatagtccaattaattccccaggtgaaaaaacatt 28822

                                                                         
Query: 300   agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 359
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28821 agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 28762

                                                                         
Query: 360   atgtctattatggatctgtaccccttgggatcgataaacctttnggattttattaaccaa 419
             ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 28761 atgtctattatggatctgtaccccttgggatcgataaaccttttggatcttattaaccaa 28702

                                                                         
Query: 420   agaaatacgactttgggctatggttagctcagctccaatcaagaatccccaagggacccc 479
             ||| |||||||||||||||||||||| |||||||||||||||||||||||||||  ||||
Sbjct: 28701 agagatacgactttgggctatggttaactcagctccaatcaagaatccccaaggaccccc 28642

                                                                         
Query: 480   aagaattcttggnatacgctcattccaatcctcaattctcctttcgagattgggggataa 539
             |||||||||||| |||||||||||||||||||||||||||||||||||||| || |||| 
Sbjct: 28641 aagaattcttggtatacgctcattccaatcctcaattctcctttcgagattcggcgatag 28582

                                                                         
Query: 540   tgaatcaattgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttatgcc 599
             ||||||||||||||||||||| |||||||| || |||||||||||||||||||||||| |
Sbjct: 28581 tgaatcaattgaacgcgcttcgaagatttgttctacttttggaagaccttgcgttatgtc 28522

                      
Query: 600   actagatct 608
             |||||||||
Sbjct: 28521 actagatct 28513

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  902 bits (455), Expect = 0.0
 Identities = 567/609 (93%), Gaps = 1/609 (0%)
 Strand = Plus / Minus

                                                                            
Query: 1        gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtacca-caggtataat 59
                |||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 14369460 gttcttgtcttgtgggtaacggtgcacaaatttttggaatccggtaccaacaggtataat 14369401

                                                                            
Query: 60       nnnnnnnagaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggc 119
                       ||||||||||||||||||| |||||||||||||||||| |||||||||  |||
Sbjct: 14369400 cccccccagaactacgttttctttcaggcctttcaaccaatcaatacgacctcgtaaggc 14369341

                                                                            
Query: 120      agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 179
                ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 14369340 agcttttgctaaaactcgatcagtttcttgaaaacttgcttcagatatgaaactttgggt 14369281

                                                                            
Query: 180      attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatccaa 239
                |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14369280 attcagggaaacccttgttattcccaataagattgcccgataatagatcgattcatccaa 14369221

                                                                            
Query: 240      agctcgccctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncatt 299
                ||| ||||||||||| || |||||||||||||| ||||||||||||||        ||||
Sbjct: 14369220 agcccgccctgctcgctctgctcgcaatagtccaattaattccccaggtgaaaaaacatt 14369161

                                                                            
Query: 300      agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 359
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14369160 agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 14369101

                                                                            
Query: 360      atgtctattatggatctgtaccccttgggatcgataaacctttnggattttattaaccaa 419
                ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 14369100 atgtctattatggatctgtaccccttgggatcgataaaccttttggatcttattaaccaa 14369041

                                                                            
Query: 420      agaaatacgactttgggctatggttagctcagctccaatcaagaatccccaagggacccc 479
                |||  ||||||||||||||||||||| |||||||||||||||||||||||||||  ||||
Sbjct: 14369040 agaggtacgactttgggctatggttaactcagctccaatcaagaatccccaaggaccccc 14368981

                                                                            
Query: 480      aagaattcttggnatacgctcattccaatcctcaattctcctttcgagattgggggataa 539
                |||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 14368980 aagaattcttggtatacgctcattccaatcctcaattctcctttcgagattcggcgataa 14368921

                                                                            
Query: 540      tgaatcaattgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttatgcc 599
                ||||||||||||||||||||| |||||||| || |||||||||||||||||||||||| |
Sbjct: 14368920 tgaatcaattgaacgcgcttcgaagatttgttctacttttggaagaccttgcgttatgtc 14368861

                         
Query: 600      actagatct 608
                |||||||||
Sbjct: 14368860 actagatct 14368852



 Score =  165 bits (83), Expect = 2e-37
 Identities = 103/110 (93%)
 Strand = Plus / Plus

                                                                            
Query: 499      tcattccaatcctcaattctcctttcgagattgggggataatgaatcaattgaacgcgct 558
                |||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||
Sbjct: 14358389 tcattccaatcctcaattctcctttcgagattcggcgatagtgaatcaattgaacgcgct 14358448

                                                                  
Query: 559      tcaaagatttgntccacttttggaagaccttgcgttatgccactagatct 608
                || |||||||| || |||||||||||||||||||||||| ||||||||||
Sbjct: 14358449 tcgaagatttgttctacttttggaagaccttgcgttatgtcactagatct 14358498

---

>dbj|AP005408.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0022A24
          Length = 148347

 Score =  902 bits (455), Expect = 0.0
 Identities = 567/609 (93%), Gaps = 1/609 (0%)
 Strand = Plus / Minus

                                                                         
Query: 1     gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtacca-caggtataat 59
             |||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 91382 gttcttgtcttgtgggtaacggtgcacaaatttttggaatccggtaccaacaggtataat 91323

                                                                         
Query: 60    nnnnnnnagaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggc 119
                    ||||||||||||||||||| |||||||||||||||||| |||||||||  |||
Sbjct: 91322 cccccccagaactacgttttctttcaggcctttcaaccaatcaatacgacctcgtaaggc 91263

                                                                         
Query: 120   agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 179
             ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 91262 agcttttgctaaaactcgatcagtttcttgaaaacttgcttcagatatgaaactttgggt 91203

                                                                         
Query: 180   attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatccaa 239
             |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91202 attcagggaaacccttgttattcccaataagattgcccgataatagatcgattcatccaa 91143

                                                                         
Query: 240   agctcgccctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncatt 299
             ||| ||||||||||| || |||||||||||||| ||||||||||||||        ||||
Sbjct: 91142 agcccgccctgctcgctctgctcgcaatagtccaattaattccccaggtgaaaaaacatt 91083

                                                                         
Query: 300   agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 359
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91082 agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 91023

                                                                         
Query: 360   atgtctattatggatctgtaccccttgggatcgataaacctttnggattttattaaccaa 419
             ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 91022 atgtctattatggatctgtaccccttgggatcgataaaccttttggatcttattaaccaa 90963

                                                                         
Query: 420   agaaatacgactttgggctatggttagctcagctccaatcaagaatccccaagggacccc 479
             |||  ||||||||||||||||||||| |||||||||||||||||||||||||||  ||||
Sbjct: 90962 agaggtacgactttgggctatggttaactcagctccaatcaagaatccccaaggaccccc 90903

                                                                         
Query: 480   aagaattcttggnatacgctcattccaatcctcaattctcctttcgagattgggggataa 539
             |||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 90902 aagaattcttggtatacgctcattccaatcctcaattctcctttcgagattcggcgataa 90843

                                                                         
Query: 540   tgaatcaattgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttatgcc 599
             ||||||||||||||||||||| |||||||| || |||||||||||||||||||||||| |
Sbjct: 90842 tgaatcaattgaacgcgcttcgaagatttgttctacttttggaagaccttgcgttatgtc 90783

                      
Query: 600   actagatct 608
             |||||||||
Sbjct: 90782 actagatct 90774



 Score =  165 bits (83), Expect = 2e-37
 Identities = 103/110 (93%)
 Strand = Plus / Plus

                                                                         
Query: 499   tcattccaatcctcaattctcctttcgagattgggggataatgaatcaattgaacgcgct 558
             |||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||
Sbjct: 80311 tcattccaatcctcaattctcctttcgagattcggcgatagtgaatcaattgaacgcgct 80370

                                                               
Query: 559   tcaaagatttgntccacttttggaagaccttgcgttatgccactagatct 608
             || |||||||| || |||||||||||||||||||||||| ||||||||||
Sbjct: 80371 tcgaagatttgttctacttttggaagaccttgcgttatgtcactagatct 80420

---

>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome
          Length = 134494

 Score =  902 bits (455), Expect = 0.0
 Identities = 567/609 (93%), Gaps = 1/609 (0%)
 Strand = Plus / Minus

                                                                         
Query: 1     gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtacca-caggtataat 59
             |||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 29055 gttcttgtcttgtgggtaacggtgcacaaatttttggaatccggtaccaacaggtataat 28996

                                                                         
Query: 60    nnnnnnnagaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggc 119
                    ||||||||||||||||||| |||||||||||||||||| ||||| |||  |||
Sbjct: 28995 cccccccagaactacgttttctttcaggcctttcaaccaatcaatacgaccacgtaaggc 28936

                                                                         
Query: 120   agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 179
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28935 agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 28876

                                                                         
Query: 180   attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatccaa 239
             |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28875 attcagggaaacccttgttattcccaataagattgcccgataatagatcgattcatccaa 28816

                                                                         
Query: 240   agctcgccctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncatt 299
             ||| ||||||||||| || |||||||||||||| ||||||||||||||        ||||
Sbjct: 28815 agcccgccctgctcgctctgctcgcaatagtccaattaattccccaggtgaaaaaacatt 28756

                                                                         
Query: 300   agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 359
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28755 agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 28696

                                                                         
Query: 360   atgtctattatggatctgtaccccttgggatcgataaacctttnggattttattaaccaa 419
             ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 28695 atgtctattatggatctgtaccccttgggatcgataaaccttttggatcttattaaccaa 28636

                                                                         
Query: 420   agaaatacgactttgggctatggttagctcagctccaatcaagaatccccaagggacccc 479
             ||| |||||||||||||||||||||| |||||||||||||||||||||||||||  ||||
Sbjct: 28635 agagatacgactttgggctatggttaactcagctccaatcaagaatccccaaggaccccc 28576

                                                                         
Query: 480   aagaattcttggnatacgctcattccaatcctcaattctcctttcgagattgggggataa 539
             |||||||||||| |||||||||||||||||||||||||||||||||||||| || |||| 
Sbjct: 28575 aagaattcttggtatacgctcattccaatcctcaattctcctttcgagattcggcgatag 28516

                                                                         
Query: 540   tgaatcaattgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttatgcc 599
             ||||||||||||||||||||| |||||||| || |||||||||||||||||||||||| |
Sbjct: 28515 tgaatcaattgaacgcgcttcgaagatttgttctacttttggaagaccttgcgttatgtc 28456

                      
Query: 600   actagatct 608
             |||||||||
Sbjct: 28455 actagatct 28447

---

>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08,
              complete sequence
          Length = 145980

 Score =  894 bits (451), Expect = 0.0
 Identities = 566/609 (92%), Gaps = 1/609 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtacca-caggtataat 59
              |||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 112494 gttcttgtcttgtgggtaacggtgcacaaatttttggaatccggtaccaacaggtataat 112435

                                                                          
Query: 60     nnnnnnnagaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggc 119
                     ||||||||||||||||||| |||||||||||||||||| |||||||||  |||
Sbjct: 112434 cccccccagaactacgttttctttcaggcctttcaaccaatcaatacgacctcgtaaggc 112375

                                                                          
Query: 120    agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 179
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112374 agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 112315

                                                                          
Query: 180    attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatccaa 239
              |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112314 attcagggaaacccttgttattcccaataagattgcccgataatagatcgattcatccaa 112255

                                                                          
Query: 240    agctcgccctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncatt 299
              ||| ||||||||||| || |||||||||||||| ||||||||||||||        ||||
Sbjct: 112254 agcccgccctgctcgctctgctcgcaatagtccaattaattccccaggtgaaaaaacatt 112195

                                                                          
Query: 300    agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 359
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112194 agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 112135

                                                                          
Query: 360    atgtctattatggatctgtaccccttgggatcgataaacctttnggattttattaaccaa 419
              ||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||| 
Sbjct: 112134 atgtctattatggatctgtaccccttgggattgataaaccttttggatcttattaaccag 112075

                                                                          
Query: 420    agaaatacgactttgggctatggttagctcagctccaatcaagaatccccaagggacccc 479
              ||| |||||||||||||||||||||| |||||||||||||||||||||||||||  ||||
Sbjct: 112074 agagatacgactttgggctatggttaactcagctccaatcaagaatccccaaggaccccc 112015

                                                                          
Query: 480    aagaattcttggnatacgctcattccaatcctcaattctcctttcgagattgggggataa 539
              |||||||||||| |||||||||||||||||||||||||||||||||||||| || |||| 
Sbjct: 112014 aagaattcttggtatacgctcattccaatcctcaattctcctttcgagattcggcgatag 111955

                                                                          
Query: 540    tgaatcaattgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttatgcc 599
              ||||||||||||||||||||| |||||||| || |||||||||||||||||||||||| |
Sbjct: 111954 tgaatcaattgaacgcgcttcgaagatttgttctacttttggaagaccttgcgttatgtc 111895

                       
Query: 600    actagatct 608
              |||||||||
Sbjct: 111894 actagatct 111886

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score =  894 bits (451), Expect = 0.0
 Identities = 566/609 (92%), Gaps = 1/609 (0%)
 Strand = Plus / Minus

                                                                           
Query: 1       gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtacca-caggtataat 59
               |||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 9258373 gttcttgtcttgtgggtaacggtgcacaaatttttggaatccggtaccaacaggtataat 9258314

                                                                           
Query: 60      nnnnnnnagaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggc 119
                      ||||||||||||||||||| |||||||||||||||||| |||||||||  |||
Sbjct: 9258313 cccccccagaactacgttttctttcaggcctttcaaccaatcaatacgacctcgtaaggc 9258254

                                                                           
Query: 120     agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 179
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9258253 agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 9258194

                                                                           
Query: 180     attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatccaa 239
               |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9258193 attcagggaaacccttgttattcccaataagattgcccgataatagatcgattcatccaa 9258134

                                                                           
Query: 240     agctcgccctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncatt 299
               ||| ||||||||||| || |||||||||||||| ||||||||||||||        ||||
Sbjct: 9258133 agcccgccctgctcgctctgctcgcaatagtccaattaattccccaggtgaaaaaacatt 9258074

                                                                           
Query: 300     agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 359
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9258073 agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 9258014

                                                                           
Query: 360     atgtctattatggatctgtaccccttgggatcgataaacctttnggattttattaaccaa 419
               ||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||| 
Sbjct: 9258013 atgtctattatggatctgtaccccttgggattgataaaccttttggatcttattaaccag 9257954

                                                                           
Query: 420     agaaatacgactttgggctatggttagctcagctccaatcaagaatccccaagggacccc 479
               ||| |||||||||||||||||||||| |||||||||||||||||||||||||||  ||||
Sbjct: 9257953 agagatacgactttgggctatggttaactcagctccaatcaagaatccccaaggaccccc 9257894

                                                                           
Query: 480     aagaattcttggnatacgctcattccaatcctcaattctcctttcgagattgggggataa 539
               |||||||||||| |||||||||||||||||||||||||||||||||||||| || |||| 
Sbjct: 9257893 aagaattcttggtatacgctcattccaatcctcaattctcctttcgagattcggcgatag 9257834

                                                                           
Query: 540     tgaatcaattgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttatgcc 599
               ||||||||||||||||||||| |||||||| || |||||||||||||||||||||||| |
Sbjct: 9257833 tgaatcaattgaacgcgcttcgaagatttgttctacttttggaagaccttgcgttatgtc 9257774

                        
Query: 600     actagatct 608
               |||||||||
Sbjct: 9257773 actagatct 9257765



 Score =  894 bits (451), Expect = 0.0
 Identities = 566/609 (92%), Gaps = 1/609 (0%)
 Strand = Plus / Minus

                                                                           
Query: 1       gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtacca-caggtataat 59
               |||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 9154468 gttcttgtcttgtgggtaacggtgcacaaatttttggaatccggtaccaacaggtataat 9154409

                                                                           
Query: 60      nnnnnnnagaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggc 119
                      ||||||||||||||||||| |||||||||||||||||| |||||||||  |||
Sbjct: 9154408 cccccccagaactacgttttctttcaggcctttcaaccaatcaatacgacctcgtaaggc 9154349

                                                                           
Query: 120     agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 179
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9154348 agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 9154289

                                                                           
Query: 180     attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatccaa 239
               |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9154288 attcagggaaacccttgttattcccaataagattgcccgataatagatcgattcatccaa 9154229

                                                                           
Query: 240     agctcgccctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncatt 299
               ||| ||||||||||| || |||||||||||||| ||||||||||||||        ||||
Sbjct: 9154228 agcccgccctgctcgctctgctcgcaatagtccaattaattccccaggtgaaaaaacatt 9154169

                                                                           
Query: 300     agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 359
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9154168 agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 9154109

                                                                           
Query: 360     atgtctattatggatctgtaccccttgggatcgataaacctttnggattttattaaccaa 419
               ||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||| 
Sbjct: 9154108 atgtctattatggatctgtaccccttgggattgataaaccttttggatcttattaaccag 9154049

                                                                           
Query: 420     agaaatacgactttgggctatggttagctcagctccaatcaagaatccccaagggacccc 479
               ||| |||||||||||||||||||||| |||||||||||||||||||||||||||  ||||
Sbjct: 9154048 agagatacgactttgggctatggttaactcagctccaatcaagaatccccaaggaccccc 9153989

                                                                           
Query: 480     aagaattcttggnatacgctcattccaatcctcaattctcctttcgagattgggggataa 539
               |||||||||||| |||||||||||||||||||||||||||||||||||||| || |||| 
Sbjct: 9153988 aagaattcttggtatacgctcattccaatcctcaattctcctttcgagattcggcgatag 9153929

                                                                           
Query: 540     tgaatcaattgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttatgcc 599
               ||||||||||||||||||||| |||||||| || |||||||||||||||||||||||| |
Sbjct: 9153928 tgaatcaattgaacgcgcttcgaagatttgttctacttttggaagaccttgcgttatgtc 9153869

                        
Query: 600     actagatct 608
               |||||||||
Sbjct: 9153868 actagatct 9153860

---

>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
              OSJNBa0034M22, complete sequence
          Length = 149435

 Score =  884 bits (446), Expect = 0.0
 Identities = 566/609 (92%), Gaps = 2/609 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtacca-caggtataat 59
              ||||||||||||| || |||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 119889 gttcttgtcttgtaggtaacggtgcacaaatttttggaatccggtaccaacaggtataat 119830

                                                                          
Query: 60     nnnnnnnagaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggc 119
                     ||||||||||||||||||| |||||||||||||||||| |||||||||  |||
Sbjct: 119829 cccccc-agaactacgttttctttcaggcctttcaaccaatcaatacgacctcgtaaggc 119771

                                                                          
Query: 120    agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 179
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119770 agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 119711

                                                                          
Query: 180    attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatccaa 239
              |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119710 attcagggaaacccttgttattcccaataagattgcccgataatagatcgattcatccaa 119651

                                                                          
Query: 240    agctcgccctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncatt 299
              ||| ||||||||||| || |||||||||||||| ||||||||||||||        ||||
Sbjct: 119650 agcccgccctgctcgctctgctcgcaatagtccaattaattccccaggtgaaaaaacatt 119591

                                                                          
Query: 300    agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 359
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119590 agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 119531

                                                                          
Query: 360    atgtctattatggatctgtaccccttgggatcgataaacctttnggattttattaaccaa 419
              ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 119530 atgtctattatggatctgtaccccttgggatcgataaaccttttggatcttattaaccaa 119471

                                                                          
Query: 420    agaaatacgactttgggctatggttagctcagctccaatcaagaatccccaagggacccc 479
              ||| |||||||||||||||||||||| || ||||||||||||||||||||||||  ||||
Sbjct: 119470 agagatacgactttgggctatggttaacttagctccaatcaagaatccccaaggaccccc 119411

                                                                          
Query: 480    aagaattcttggnatacgctcattccaatcctcaattctcctttcgagattgggggataa 539
              |||||||||||| |||||||||||||||||||||||||||||||||||||| || |||| 
Sbjct: 119410 aagaattcttggtatacgctcattccaatcctcaattctcctttcgagatttggcgatag 119351

                                                                          
Query: 540    tgaatcaattgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttatgcc 599
              ||||||||||||||||||||| |||||||| || |||||||||||||||||||||||| |
Sbjct: 119350 tgaatcaattgaacgcgcttcgaagatttgttctacttttggaagaccttgcgttatgtc 119291

                       
Query: 600    actagatct 608
              |||||||||
Sbjct: 119290 actagatct 119282

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  884 bits (446), Expect = 0.0
 Identities = 566/609 (92%), Gaps = 2/609 (0%)
 Strand = Plus / Minus

                                                                            
Query: 1        gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtacca-caggtataat 59
                ||||||||||||| || |||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 12822430 gttcttgtcttgtaggtaacggtgcacaaatttttggaatccggtaccaacaggtataat 12822371

                                                                            
Query: 60       nnnnnnnagaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggc 119
                       ||||||||||||||||||| |||||||||||||||||| |||||||||  |||
Sbjct: 12822370 cccccc-agaactacgttttctttcaggcctttcaaccaatcaatacgacctcgtaaggc 12822312

                                                                            
Query: 120      agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 179
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12822311 agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 12822252

                                                                            
Query: 180      attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatccaa 239
                |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12822251 attcagggaaacccttgttattcccaataagattgcccgataatagatcgattcatccaa 12822192

                                                                            
Query: 240      agctcgccctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncatt 299
                ||| ||||||||||| || |||||||||||||| ||||||||||||||        ||||
Sbjct: 12822191 agcccgccctgctcgctctgctcgcaatagtccaattaattccccaggtgaaaaaacatt 12822132

                                                                            
Query: 300      agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 359
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12822131 agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 12822072

                                                                            
Query: 360      atgtctattatggatctgtaccccttgggatcgataaacctttnggattttattaaccaa 419
                ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 12822071 atgtctattatggatctgtaccccttgggatcgataaaccttttggatcttattaaccaa 12822012

                                                                            
Query: 420      agaaatacgactttgggctatggttagctcagctccaatcaagaatccccaagggacccc 479
                ||| |||||||||||||||||||||| || ||||||||||||||||||||||||  ||||
Sbjct: 12822011 agagatacgactttgggctatggttaacttagctccaatcaagaatccccaaggaccccc 12821952

                                                                            
Query: 480      aagaattcttggnatacgctcattccaatcctcaattctcctttcgagattgggggataa 539
                |||||||||||| |||||||||||||||||||||||||||||||||||||| || |||| 
Sbjct: 12821951 aagaattcttggtatacgctcattccaatcctcaattctcctttcgagatttggcgatag 12821892

                                                                            
Query: 540      tgaatcaattgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttatgcc 599
                ||||||||||||||||||||| |||||||| || |||||||||||||||||||||||| |
Sbjct: 12821891 tgaatcaattgaacgcgcttcgaagatttgttctacttttggaagaccttgcgttatgtc 12821832

                         
Query: 600      actagatct 608
                |||||||||
Sbjct: 12821831 actagatct 12821823

---

>emb|X52270.1|CHZMATPI Maize chloroplast 3'part of rpoC2 gene, rps2 gene, atpI gene and
           5'part of atpH gene
          Length = 3463

 Score =  753 bits (380), Expect = 0.0
 Identities = 458/488 (93%), Gaps = 1/488 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtacca-caggtataat 59
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 488 gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtaccaacaggtataat 429

                                                                       
Query: 60  nnnnnnnagaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggc 119
                  |||||||||||||||||||  ||||||||||||||||| ||||||||| ||||
Sbjct: 428 cccccccagaactacgttttctttcagacctttcaaccaatcaatacgacctcgtagggc 369

                                                                       
Query: 120 agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 309

                                                                       
Query: 180 attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatccaa 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 308 attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatctaa 249

                                                                       
Query: 240 agctcgccctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncatt 299
           ||| ||||||||||||||||||||||||||||| ||||||||||||||        ||||
Sbjct: 248 agcccgccctgctcgttccgctcgcaatagtcctattaattccccaggtaaaaaaacatt 189

                                                                       
Query: 300 agacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctat 359
           |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||
Sbjct: 188 agacattccatcttcggaaacccttacttttgatgttacttggcgtataataatctctat 129

                                                                       
Query: 360 atgtctattatggatctgtaccccttgggatcgataaacctttnggattttattaaccaa 419
           ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 128 atgtctattatggatctgtaccccttgggatcgataaaccttttggatcttattaaccaa 69

                                                                       
Query: 420 agaaatacgactttgggctatggttagctcagctccaatcaagaatccccaagggacccc 479
           ||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 68  agagatacgactttgggctatggttagctcagctccaatcaagaatccccagggaacccc 9

                   
Query: 480 aagaattc 487
           ||||||||
Sbjct: 8   aagaattc 1

---

>gb|DQ069545.1| Typha latifolia RNA polymerase beta'' chain (rpoC2) gene, partial
            cds; chloroplast
          Length = 4161

 Score =  656 bits (331), Expect = 0.0
 Identities = 524/593 (88%), Gaps = 1/593 (0%)
 Strand = Plus / Minus

                                                                        
Query: 17   gaacgatgcacaaatttttggaatccggtacca-caggtataatnnnnnnnagaactacg 75
            |||||||||||||||||||||||||| |||||| ||||||||||       ||||| |||
Sbjct: 3986 gaacgatgcacaaatttttggaatccagtaccaacaggtataatcccccctagaacaacg 3927

                                                                        
Query: 76   ttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaaact 135
            || ||||||| |||||||||||||||||| |||||||||   ||||||||||||||||||
Sbjct: 3926 ttctctttcaggcctttcaaccaatcaatacgacctcgtaaagcagcttttgctaaaact 3867

                                                                        
Query: 136  cgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagggaagccctt 195
            |||||||||||||||||||||||||| |||||||||||||| |||||||| || || |||
Sbjct: 3866 cgagcagtttcttgaaaacttgcttcggatatgaaactttgagtattcagagatgctctt 3807

                                                                        
Query: 196  gttattcccaataagattgcccgataatagatcgattcatccaaagctcgccctgctcgt 255
            ||||||||||||||||||||||||||| |||||||||||| |||||| |||||||| |||
Sbjct: 3806 gttattcccaataagattgcccgataacagatcgattcattcaaagcgcgccctgcgcgt 3747

                                                                        
Query: 256  tccgctcgcaatagtccgattaattccccaggcnnnnnnncattagacattccatcttcg 315
            ||||||||||| | |||||||||||| |||||        ||||||||||||||||||| 
Sbjct: 3746 tccgctcgcaacaatccgattaattctccaggtgaaaaaacattagacattccatcttct 3687

                                                                        
Query: 316  gaaacccgcacttttgatgttacttggcgtataataatctctatatgtctattatggatc 375
            ||||||   ||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 3686 gaaaccaatacttttgatgttacttgacgtacaataatctctatatgtctattatggatc 3627

                                                                        
Query: 376  tgtaccccttgggatcgataaacctttnggattttattaaccaaagaaatacgactttgg 435
            |||||||| |||||||||||||||||| |||| |||||||||||||| ||||||||||| 
Sbjct: 3626 tgtaccccctgggatcgataaaccttttggatcttattaaccaaagagatacgactttga 3567

                                                                        
Query: 436  gctatggttagctcagctccaatcaagaatccccaagggaccccaagaattcttggnata 495
            ||||||||||||||||||||||| ||||| ||||| |||| ||||||||||||||| |||
Sbjct: 3566 gctatggttagctcagctccaattaagaacccccaggggatcccaagaattcttggtata 3507

                                                                        
Query: 496  cgctcattccaatcctcaattctcctttcgagattgggggataatgaatcaattgaacgc 555
            || || |||||| | |||| |||||||||||| ||    |||| ||||||||| ||||||
Sbjct: 3506 cgttcgttccaaccttcaactctcctttcgaggttcatcgatattgaatcaatcgaacgc 3447

                                                                 
Query: 556  gcttcaaagatttgntccacttttggaagaccttgcgttatgccactagatct 608
             |||| |||||||| ||||||||||||||||||||||||||| ||| ||||||
Sbjct: 3446 acttctaagatttgttccacttttggaagaccttgcgttatgtcaccagatct 3394

---

>emb|AJ222797.1|CHMSINTER Miscanthus sinensis chloroplast DNA rpoC2-rps2 intergenic spacer
          Length = 960

 Score =  642 bits (324), Expect = 0.0
 Identities = 447/488 (91%), Gaps = 4/488 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   gttcttgtcttgtggggaacgatgca-caaatttttggaatccggtacca-caggtataa 58
           |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 491 gttcttgtcttgtggggaacgatgcagcaaatttttggaatccggtaccaacaggtataa 432

                                                                       
Query: 59  tnnnnnnnagaactacg-ttttctttcaagcctttcaacc-aatcaatgcgacctcgtng 116
           |       ||||||||| |||||||||| |||| |||||| ||||||| ||||||||| |
Sbjct: 431 tcccccccagaactacggttttctttcaggcctgtcaacccaatcaatacgacctcgtag 372

                                                                       
Query: 117 ggcagcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttg 176
           ||||||||||   | | |||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 371 ggcagcttttctgagagctcgagcagtttcttgaacacttgcttcagatatgacactttg 312

                                                                       
Query: 177 ggtattcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatc 236
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ggtattcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatc 252

                                                                       
Query: 237 caaagctcgccctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnnc 296
            ||||| ||||||||||||||||||||||||||||| ||||||||||||||        |
Sbjct: 251 taaagcccgccctgctcgttccgctcgcaatagtcctattaattccccaggtaaaaaaac 192

                                                                       
Query: 297 attagacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctc 356
           ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||
Sbjct: 191 attagacattccatcttcggaaacccttacttttgatgttacttggcgtataataatctc 132

                                                                       
Query: 357 tatatgtctattatggatctgtaccccttgggatcgataaacctttnggattttattaac 416
           |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 131 tatatgtctattatggatctgtaccccttgggatcgataaaccttttggatcttattaac 72

                                                                       
Query: 417 caaagaaatacgactttgggctatggttagctcagctccaatcaagaatccccaagggac 476
           ||| || ||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 71  caaggagatacgactttgggctatggttagctcagctccaatcaagaatccccagggaac 12

                   
Query: 477 cccaagaa 484
           ||||||||
Sbjct: 11  cccaagaa 4

---

>gb|DQ069546.1| Yucca schidigera RNA polymerase beta'' chain (rpoC2) gene, partial
            cds; chloroplast
          Length = 4152

 Score =  575 bits (290), Expect = e-161
 Identities = 513/592 (86%), Gaps = 1/592 (0%)
 Strand = Plus / Minus

                                                                        
Query: 17   gaacgatgcacaaatttttggaatccggtacc-acaggtataatnnnnnnnagaactacg 75
            ||||| ||||| ||||||| |||||| ||||| ||||| |||||       ||||| || 
Sbjct: 3992 gaacggtgcactaattttttgaatcccgtaccgacagggataataccccccagaacaaca 3933

                                                                        
Query: 76   ttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaaact 135
            ||||||||||| || |||||||||||||| ||||| ||| | ||||||||||||||||||
Sbjct: 3932 ttttctttcaaacccttcaaccaatcaatacgaccccgtagagcagcttttgctaaaact 3873

                                                                        
Query: 136  cgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagggaagccctt 195
            | |||||||||||||||||||||||| |||||||||||||| |||||||| || ||||| 
Sbjct: 3872 ctagcagtttcttgaaaacttgcttcggatatgaaactttgagtattcagagatgccctc 3813

                                                                        
Query: 196  gttattcccaataagattgcccgataatagatcgattcatccaaagctcgccctgctcgt 255
            |||||||||||||| |||||||||||| |||||| ||| || ||||| ||||||||||||
Sbjct: 3812 gttattcccaataaaattgcccgataacagatcgcttcgtctaaagcacgccctgctcgt 3753

                                                                        
Query: 256  tccgctcgcaatagtccgattaattccccaggcnnnnnnncattagacattccatcttcg 315
            ||||||||||| | |||||||||||| |||||         |||||||||||||||||| 
Sbjct: 3752 tccgctcgcaacaatccgattaattctccaggtaaaaaaagattagacattccatcttct 3693

                                                                        
Query: 316  gaaacccgcacttttgatgttacttggcgtataataatctctatatgtctattatggatc 375
            ||||||  |||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 3692 gaaaccaacacttttgatgttacttgccgtacaataatctctatatgtctattatggatc 3633

                                                                        
Query: 376  tgtaccccttgggatcgataaacctttnggattttattaaccaaagaaatacgactttgg 435
            |||||||| |||||||||||||||||| |||| |||||||||||||| ||||||||||||
Sbjct: 3632 tgtaccccctgggatcgataaaccttttggatcttattaaccaaagagatacgactttgg 3573

                                                                        
Query: 436  gctatggttagctcagctccaatcaagaatccccaagggaccccaagaattcttggnata 495
            ||||||||||||||||||||||| |||||||||||||| |  |||||||||||||| |||
Sbjct: 3572 gctatggttagctcagctccaattaagaatccccaaggaattccaagaattcttggtata 3513

                                                                        
Query: 496  cgctcattccaatcctcaattctcctttcgagattgggggataatgaatcaattgaacgc 555
            ||||| |||||| | |||| ||||||||| || ||    |||| |||| |||| || || 
Sbjct: 3512 cgctcgttccaaccttcaactctcctttcaaggttcattgatattgaaccaatcgagcga 3453

                                                                
Query: 556  gcttcaaagatttgntccacttttggaagaccttgcgttatgccactagatc 607
             |||| |||||||| ||||||||||||||||||||||||||| ||| |||||
Sbjct: 3452 acttctaagatttgttccacttttggaagaccttgcgttatgtcaccagatc 3401

---

>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome
          Length = 148964

 Score =  553 bits (279), Expect = e-154
 Identities = 511/593 (86%), Gaps = 1/593 (0%)
 Strand = Plus / Plus

                                                                         
Query: 17    gaacgatgcacaaatttttggaatccggtacca-caggtataatnnnnnnnagaactacg 75
             |||||||| || ||||| | ||||||||||||| | ||||||||       ||||| |||
Sbjct: 17279 gaacgatgtactaatttattgaatccggtaccaaccggtataattccccccagaacaacg 17338

                                                                         
Query: 76    ttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaaact 135
             |||||||||| |||||||||||||||||| ||||||||| | ||||||||||||||||||
Sbjct: 17339 ttttctttcaggcctttcaaccaatcaatacgacctcgtagagcagcttttgctaaaact 17398

                                                                         
Query: 136   cgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagggaagccctt 195
             |||||||||||||||||||||||||| |||||||||||||| |||||||| || | | | 
Sbjct: 17399 cgagcagtttcttgaaaacttgcttcggatatgaaactttgagtattcagagatgacttc 17458

                                                                         
Query: 196   gttattcccaataagattgcccgataatagatcgattcatccaaagctcgccctgctcgt 255
             ||||||||||||||||||||||||||| |||| |||||  ||||| | ||||||||||||
Sbjct: 17459 gttattcccaataagattgcccgataacagattgattcggccaaaacgcgccctgctcgt 17518

                                                                         
Query: 256   tccgctcgcaatagtccgattaattccccaggcnnnnnnncattagacattccatcttcg 315
             || |||||||| | ||| || |||||||||||        ||||||||||||||||||||
Sbjct: 17519 tctgctcgcaacaatccaataaattccccaggtaaaaaaacattagacattccatcttcg 17578

                                                                         
Query: 316   gaaacccgcacttttgatgttacttggcgtataataatctctatatgtctattatggatc 375
             ||||||   ||| ||||||||||||| |||| ||||||||||| ||||||||||||||||
Sbjct: 17579 gaaaccaaaactcttgatgttacttgacgtacaataatctctagatgtctattatggatc 17638

                                                                         
Query: 376   tgtaccccttgggatcgataaacctttnggattttattaaccaaagaaatacgactttgg 435
             |||||||| |||||||||||||||||| | || |||||||||||||| ||||||||||||
Sbjct: 17639 tgtaccccctgggatcgataaaccttttgtatcttattaaccaaagagatacgactttgg 17698

                                                                         
Query: 436   gctatggttagctcagctccaatcaagaatccccaagggaccccaagaattcttggnata 495
             ||||||||||| ||||||||||||||||||||||| |||| ||||||||| ||| | |||
Sbjct: 17699 gctatggttagttcagctccaatcaagaatccccaggggatcccaagaatccttcggata 17758

                                                                         
Query: 496   cgctcattccaatcctcaattctcctttcgagattgggggataatgaatcaattgaacgc 555
             || || | |||| | |||| ||| |||||||| ||    |||| ||||||||||||||| 
Sbjct: 17759 cgttcgtcccaaccttcaactcttctttcgaggttcatcgatattgaatcaattgaacga 17818

                                                                  
Query: 556   gcttcaaagatttgntccacttttggaagaccttgcgttatgccactagatct 608
              |||| |||||||| || |||||||||||||||||||||||| ||| ||||||
Sbjct: 17819 acttctaagatttgttctacttttggaagaccttgcgttatgtcaccagatct 17871

---

>dbj|AK062380.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-B08, full
           insert sequence
          Length = 714

 Score =  458 bits (231), Expect = e-125
 Identities = 304/332 (91%), Gaps = 1/332 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   gttcttgtcttgtggggaacgatgcacaaatttttggaatccggtacca-caggtataat 59
           |||||||| ||||||| |||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 332 gttcttgttttgtgggtaacggtgcacaaatttttggaatccggtaccaacaggtataat 273

                                                                       
Query: 60  nnnnnnnagaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggc 119
                  ||||||||||||||||||| |||||||||||||||||| |||||||||  |||
Sbjct: 272 cccccccagaactacgttttctttcaggcctttcaaccaatcaatacgacctcgtaaggc 213

                                                                       
Query: 120 agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggt 153

                                                                       
Query: 180 attcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatccaa 239
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 attcagggaaacccttgttattcccaataagattgcccgataatagatcgattcatccaa 93

                                                                       
Query: 240 agctcgccctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncatt 299
           ||| ||||||||||| || |||||||||||||| ||||||||||||||        ||||
Sbjct: 92  agcccgccctgctcgctctgctcgcaatagtccaattaattccccaggtaaaaaaacatt 33

                                           
Query: 300 agacattccatcttcggaaacccgcacttttg 331
           ||||||||||||||||||||||||||||||||
Sbjct: 32  agacattccatcttcggaaacccgcacttttg 1

---

>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome
          Length = 153337

 Score =  454 bits (229), Expect = e-124
 Identities = 452/530 (85%)
 Strand = Plus / Plus

                                                                         
Query: 67    agaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagctttt 126
             ||||| ||||| ||||||| |||||||||||||||||| ||||||||| | || ||||||
Sbjct: 17298 agaacaacgttctctttcaggcctttcaaccaatcaatacgacctcgtagagcggctttt 17357

                                                                         
Query: 127   gctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagg 186
             |||||||||||||| |||||||||||||| ||||| |||||||||||||| |||||||  
Sbjct: 17358 gctaaaactcgagcggtttcttgaaaactcgcttcggatatgaaactttgagtattcaaa 17417

                                                                         
Query: 187   gaagcccttgttattcccaataagattgcccgataatagatcgattcatccaaagctcgc 246
             || ||||| ||||||||||||||||| || || ||| |||||| ||| |||||||| |||
Sbjct: 17418 gatgccctcgttattcccaataagatagctcggtaacagatcgcttcttccaaagcacgc 17477

                                                                         
Query: 247   cctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncattagacatt 306
             || | ||||||||||||||| | |||||||| ||| || ||        |||||||||||
Sbjct: 17478 ccggttcgttccgctcgcaacaatccgattagttctccgggtgaaaaaacattagacatt 17537

                                                                         
Query: 307   ccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctatatgtcta 366
             |||||||| ||||||  |||| ||||||||| ||| |||| ||||||||||||||| |||
Sbjct: 17538 ccatcttctgaaaccaacactcttgatgttatttgacgtacaataatctctatatgccta 17597

                                                                         
Query: 367   ttatggatctgtaccccttgggatcgataaacctttnggattttattaaccaaagaaata 426
             ||||||||||| ||||| ||||| |||||||||||| |||| ||||||||||||||||||
Sbjct: 17598 ttatggatctgcaccccctgggaccgataaaccttttggatcttattaaccaaagaaata 17657

                                                                         
Query: 427   cgactttgggctatggttagctcagctccaatcaagaatccccaagggaccccaagaatt 486
             |||||||| ||||||||||||||||| |||||||||||||||||||| | ||||||||||
Sbjct: 17658 cgactttgcgctatggttagctcagcaccaatcaagaatccccaaggaatcccaagaatt 17717

                                                                         
Query: 487   cttggnatacgctcattccaatcctcaattctcctttcgagattgggggataatgaatca 546
              |||  ||||| || |||||| | ||||  ||| |||| || ||    |||| |||||||
Sbjct: 17718 tttgttatacgttcgttccaaccttcaaccctcttttctaggttcatcgatattgaatca 17777

                                                               
Query: 547   attgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttat 596
             || ||||||||||| || |  || |||||||||||||||||||| |||||
Sbjct: 17778 atcgaacgcgcttctaacacctgttccacttttggaagaccttgtgttat 17827

---

>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome
          Length = 160301

 Score =  402 bits (203), Expect = e-109
 Identities = 441/524 (84%)
 Strand = Plus / Plus

                                                                         
Query: 73    acgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaa 132
             ||||||||||||| ||||||||||||||| || ||||| ||  | |||||||||||||||
Sbjct: 17520 acgttttctttcaggcctttcaaccaatcgatacgaccccggagagcagcttttgctaaa 17579

                                                                         
Query: 133   actcgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagggaagcc 192
             ||||||||||||||||||||||||||||||||||| |||||||| || ||||| || || 
Sbjct: 17580 actcgagcagtttcttgaaaacttgcttcagatataaaactttgagtgttcagagatgct 17639

                                                                         
Query: 193   cttgttattcccaataagattgcccgataatagatcgattcatccaaagctcgccctgct 252
             || |||||||||||||| |  || |||||| | |||| ||| || ||||| ||||| | |
Sbjct: 17640 ctcgttattcccaataaaacggctcgataacaaatcgcttcttctaaagcacgccccgtt 17699

                                                                         
Query: 253   cgttccgctcgcaatagtccgattaattccccaggcnnnnnnncattagacattccatct 312
             |||||||||||||||| ||| || | |||||| ||        |||||||||||||||||
Sbjct: 17700 cgttccgctcgcaataatccaatcagttccccgggtaaaaaaacattagacattccatct 17759

                                                                         
Query: 313   tcggaaacccgcacttttgatgttacttggcgtataataatctctatatgtctattatgg 372
             || ||||||   ||||||||||||| ||| |||| |||||| |||||||| |||||||||
Sbjct: 17760 tctgaaaccaatacttttgatgttatttgacgtacaataatttctatatgcctattatgg 17819

                                                                         
Query: 373   atctgtaccccttgggatcgataaacctttnggattttattaaccaaagaaatacgactt 432
             ||||||||||| || ||||||||||||||| |||| |||||||||||||| | |||||||
Sbjct: 17820 atctgtaccccctgagatcgataaaccttttggatcttattaaccaaagagagacgactt 17879

                                                                         
Query: 433   tgggctatggttagctcagctccaatcaagaatccccaagggaccccaagaattcttggn 492
             ||  |||| ||||||||||| ||||||| |||||||||||| |  |||||||||||||  
Sbjct: 17880 tgcactatagttagctcagcaccaatcacgaatccccaaggaattccaagaattcttgtt 17939

                                                                         
Query: 493   atacgctcattccaatcctcaattctcctttcgagattgggggataatgaatcaattgaa 552
             ||||  || |||||| ||||||||||| |||| || ||    |||| ||||||||| |||
Sbjct: 17940 atacattcgttccaaccctcaattctcttttctaggttcatcgatattgaatcaatcgaa 17999

                                                         
Query: 553   cgcgcttcaaagatttgntccacttttggaagaccttgcgttat 596
             ||| |||| || | ||| ||||||||||||||||| ||||||||
Sbjct: 18000 cgcacttctaacacttgttccacttttggaagaccctgcgttat 18043

---

>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome
          Length = 150725

 Score =  400 bits (202), Expect = e-108
 Identities = 446/531 (83%)
 Strand = Plus / Plus

                                                                         
Query: 67    agaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagctttt 126
             ||||| ||||||||||| |  ||||||||||||||||| || || ||| | || ||||||
Sbjct: 15526 agaacaacgttttcttttagtcctttcaaccaatcaatacggccccgtagagctgctttt 15585

                                                                         
Query: 127   gctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagg 186
             ||||||||||||||||||||||||||||| ||||| || || |||||||| |||||||| 
Sbjct: 15586 gctaaaactcgagcagtttcttgaaaactcgcttcggagataaaactttgagtattcaga 15645

                                                                         
Query: 187   gaagcccttgttattcccaataagattgcccgataatagatcgattcatccaaagctcgc 246
             || || || ||||||||||||||| | || || ||| | |||| ||| |||||||| || 
Sbjct: 15646 gatgctctcgttattcccaataaggtagcgcggtaacatatcgcttcttccaaagcgcgt 15705

                                                                         
Query: 247   cctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncattagacatt 306
             || | ||||||||| || || | ||| |||| ||| || |||       |||||||||||
Sbjct: 15706 cccgttcgttccgcccgaaacaatccaattagttctccgggcaaaaaaacattagacatt 15765

                                                                         
Query: 307   ccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctatatgtcta 366
             |||||||| ||||||   ||||||||||||| ||| |||| |||||| ||||||||||||
Sbjct: 15766 ccatcttctgaaaccaagacttttgatgttatttgacgtacaataatttctatatgtcta 15825

                                                                         
Query: 367   ttatggatctgtaccccttgggatcgataaacctttnggattttattaaccaaagaaata 426
             ||||||||||| |||||||| ||||||||||||||| |||| || |||||||||||||||
Sbjct: 15826 ttatggatctgcaccccttgtgatcgataaaccttttggatcttgttaaccaaagaaata 15885

                                                                         
Query: 427   cgactttgggctatggttagctcagctccaatcaagaatccccaagggaccccaagaatt 486
             |||||||| ||||| ||||||||||| ||||||||||||||||||||    |||||||||
Sbjct: 15886 cgactttgcgctatagttagctcagccccaatcaagaatccccaaggacttccaagaatt 15945

                                                                         
Query: 487   cttggnatacgctcattccaatcctcaattctcctttcgagattgggggataatgaatca 546
             ||||  ||||| || ||||||   ||||| ||| |||| ||||||  ||||| |||||||
Sbjct: 15946 cttgttatacgttcgttccaactatcaatcctcttttctagattgatggatattgaatca 16005

                                                                
Query: 547   attgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttatg 597
             || |||||  |||| |||| ||| |||||||||||||||||||||||||||
Sbjct: 16006 atcgaacgaacttctaagacttgttccacttttggaagaccttgcgttatg 16056

---

>gb|AY521596.1| Cucumis sativus isolate GY-14, chloroplast sequence
          Length = 16653

 Score =  383 bits (193), Expect = e-103
 Identities = 443/530 (83%)
 Strand = Plus / Plus

                                                                        
Query: 67   agaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagctttt 126
            ||||| ||||| |||||||| ||| |||||||||| || ||||||||  |||| ||||||
Sbjct: 6987 agaacaacgttctctttcaaacctctcaaccaatcgatacgacctcggagggcggctttt 7046

                                                                        
Query: 127  gctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagg 186
            ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| || 
Sbjct: 7047 gctaaaactcgagcagtttcttgaaaacttgcttccgatatgaaactttgagtatttaga 7106

                                                                        
Query: 187  gaagcccttgttattcccaataagattgcccgataatagatcgattcatccaaagctcgc 246
            || ||  | |||||||||||||| |  || || ||| |||||| ||| |||||||| |||
Sbjct: 7107 gatgctttcgttattcccaataatacggctcggtaacagatcgcttcttccaaagcacgc 7166

                                                                        
Query: 247  cctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncattagacatt 306
            |||| |||||||||||| || |  || || | ||| |||||        |||||||||||
Sbjct: 7167 cctgttcgttccgctcgtaacaacccaatgagttctccaggtgaaaaaacattagacatt 7226

                                                                        
Query: 307  ccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctatatgtcta 366
            |||||||| ||||||  |||||||||||||| ||| |||| |||||| || |||||||||
Sbjct: 7227 ccatcttctgaaaccaacacttttgatgttatttgacgtacaataatttcgatatgtcta 7286

                                                                        
Query: 367  ttatggatctgtaccccttgggatcgataaacctttnggattttattaaccaaagaaata 426
            ||||||||||  ||||| |||||||||||||||||| |||| |||||||||||||| |||
Sbjct: 7287 ttatggatctccaccccctgggatcgataaaccttttggatcttattaaccaaagagata 7346

                                                                        
Query: 427  cgactttgggctatggttagctcagctccaatcaagaatccccaagggaccccaagaatt 486
            ||||||||  |||| ||||| ||||| |||||||| ||||||||||| |  |||||||||
Sbjct: 7347 cgactttgcactatcgttagttcagcaccaatcaaaaatccccaaggaattccaagaatt 7406

                                                                        
Query: 487  cttggnatacgctcattccaatcctcaattctcctttcgagattgggggataatgaatca 546
            ||||  |||||||| |||||| ||||||||||| |||| ||  |    |||| |||||||
Sbjct: 7407 cttgttatacgctcgttccaaccctcaattctcttttctaggctcatcgatattgaatca 7466

                                                              
Query: 547  attgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttat 596
            || |||||| |||| || | ||| || |||||||||||||| ||||||||
Sbjct: 7467 atcgaacgcacttctaatacttgttcgacttttggaagaccctgcgttat 7516

---

>emb|AJ970307.1| Cucumis sativus chloroplast complete genome
          Length = 155293

 Score =  383 bits (193), Expect = e-103
 Identities = 443/530 (83%)
 Strand = Plus / Plus

                                                                         
Query: 67    agaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagctttt 126
             ||||| ||||| |||||||| ||| |||||||||| || ||||||||  |||| ||||||
Sbjct: 17588 agaacaacgttctctttcaaacctctcaaccaatcgatacgacctcggagggcggctttt 17647

                                                                         
Query: 127   gctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagg 186
             ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| || 
Sbjct: 17648 gctaaaactcgagcagtttcttgaaaacttgcttccgatatgaaactttgagtatttaga 17707

                                                                         
Query: 187   gaagcccttgttattcccaataagattgcccgataatagatcgattcatccaaagctcgc 246
             || ||  | |||||||||||||| |  || || ||| |||||| ||| |||||||| |||
Sbjct: 17708 gatgctttcgttattcccaataatacggctcggtaacagatcgcttcttccaaagcacgc 17767

                                                                         
Query: 247   cctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncattagacatt 306
             |||| |||||||||||| || |  || || | ||| |||||        |||||||||||
Sbjct: 17768 cctgttcgttccgctcgtaacaacccaatgagttctccaggtgaaaaaacattagacatt 17827

                                                                         
Query: 307   ccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctatatgtcta 366
             |||||||| ||||||  |||||||||||||| ||| |||| |||||| || |||||||||
Sbjct: 17828 ccatcttctgaaaccaacacttttgatgttatttgacgtacaataatttcgatatgtcta 17887

                                                                         
Query: 367   ttatggatctgtaccccttgggatcgataaacctttnggattttattaaccaaagaaata 426
             ||||||||||  ||||| |||||||||||||||||| |||| |||||||||||||| |||
Sbjct: 17888 ttatggatctccaccccctgggatcgataaaccttttggatcttattaaccaaagagata 17947

                                                                         
Query: 427   cgactttgggctatggttagctcagctccaatcaagaatccccaagggaccccaagaatt 486
             ||||||||  |||| ||||| ||||| |||||||| ||||||||||| |  |||||||||
Sbjct: 17948 cgactttgcactatcgttagttcagcaccaatcaaaaatccccaaggaattccaagaatt 18007

                                                                         
Query: 487   cttggnatacgctcattccaatcctcaattctcctttcgagattgggggataatgaatca 546
             ||||  |||||||| |||||| ||||||||||| |||| ||  |    |||| |||||||
Sbjct: 18008 cttgttatacgctcgttccaaccctcaattctcttttctaggctcatcgatattgaatca 18067

                                                               
Query: 547   attgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttat 596
             || |||||| |||| || | ||| || |||||||||||||| ||||||||
Sbjct: 18068 atcgaacgcacttctaatacttgttcgacttttggaagaccctgcgttat 18117

---

>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome
          Length = 155527

 Score =  383 bits (193), Expect = e-103
 Identities = 443/530 (83%)
 Strand = Plus / Plus

                                                                         
Query: 67    agaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagctttt 126
             ||||| ||||| |||||||| ||| |||||||||| || ||||||||  |||| ||||||
Sbjct: 17577 agaacaacgttctctttcaaacctctcaaccaatcgatacgacctcggagggcggctttt 17636

                                                                         
Query: 127   gctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagg 186
             ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| || 
Sbjct: 17637 gctaaaactcgagcagtttcttgaaaacttgcttccgatatgaaactttgagtatttaga 17696

                                                                         
Query: 187   gaagcccttgttattcccaataagattgcccgataatagatcgattcatccaaagctcgc 246
             || ||  | |||||||||||||| |  || || ||| |||||| ||| |||||||| |||
Sbjct: 17697 gatgctttcgttattcccaataatacggctcggtaacagatcgcttcttccaaagcacgc 17756

                                                                         
Query: 247   cctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncattagacatt 306
             |||| |||||||||||| || |  || || | ||| |||||        |||||||||||
Sbjct: 17757 cctgttcgttccgctcgtaacaacccaatgagttctccaggtgaaaaaacattagacatt 17816

                                                                         
Query: 307   ccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctatatgtcta 366
             |||||||| ||||||  |||||||||||||| ||| |||| |||||| || |||||||||
Sbjct: 17817 ccatcttctgaaaccaacacttttgatgttatttgacgtacaataatttcgatatgtcta 17876

                                                                         
Query: 367   ttatggatctgtaccccttgggatcgataaacctttnggattttattaaccaaagaaata 426
             ||||||||||  ||||| |||||||||||||||||| |||| |||||||||||||| |||
Sbjct: 17877 ttatggatctccaccccctgggatcgataaaccttttggatcttattaaccaaagagata 17936

                                                                         
Query: 427   cgactttgggctatggttagctcagctccaatcaagaatccccaagggaccccaagaatt 486
             ||||||||  |||| ||||| ||||| |||||||| ||||||||||| |  |||||||||
Sbjct: 17937 cgactttgcactatcgttagttcagcaccaatcaaaaatccccaaggaattccaagaatt 17996

                                                                         
Query: 487   cttggnatacgctcattccaatcctcaattctcctttcgagattgggggataatgaatca 546
             ||||  |||||||| |||||| ||||||||||| |||| ||  |    |||| |||||||
Sbjct: 17997 cttgttatacgctcgttccaaccctcaattctcttttctaggctcatcgatattgaatca 18056

                                                               
Query: 547   attgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttat 596
             || |||||| |||| || | ||| || |||||||||||||| ||||||||
Sbjct: 18057 atcgaacgcacttctaatacttgttcgacttttggaagaccctgcgttat 18106

---

>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome
          Length = 160286

 Score =  379 bits (191), Expect = e-102
 Identities = 438/524 (83%)
 Strand = Plus / Plus

                                                                         
Query: 73    acgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaa 132
             ||||| ||||| | ||||||||||||||| || || || ||  | |||||||| ||||||
Sbjct: 18209 acgttctcttttaggcctttcaaccaatcgatacggccccggagagcagctttggctaaa 18268

                                                                         
Query: 133   actcgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagggaagcc 192
             ||||||||||||||||||||||| |||||||||||||||||||| |||||||  || |||
Sbjct: 18269 actcgagcagtttcttgaaaactcgcttcagatatgaaactttgagtattcaaagatgcc 18328

                                                                         
Query: 193   cttgttattcccaataagattgcccgataatagatcgattcatccaaagctcgccctgct 252
             |||||||||||||||| ||| || || ||| |||||||||| |||||||| ||||| | |
Sbjct: 18329 cttgttattcccaataggatggcgcggtaacagatcgattcttccaaagcgcgccccgtt 18388

                                                                         
Query: 253   cgttccgctcgcaatagtccgattaattccccaggcnnnnnnncattagacattccatct 312
             ||  |||||||||| | ||| |||| ||| |||||        |||||||||||||||| 
Sbjct: 18389 cgcgccgctcgcaacaatccaattagttctccaggtaaaaaaacattagacattccatcc 18448

                                                                         
Query: 313   tcggaaacccgcacttttgatgttacttggcgtataataatctctatatgtctattatgg 372
             || ||||||  ||| |||||||||| |||||||| |||||| ||||| || |||||||||
Sbjct: 18449 tctgaaaccaacacctttgatgttatttggcgtacaataatttctatgtgcctattatgg 18508

                                                                         
Query: 373   atctgtaccccttgggatcgataaacctttnggattttattaaccaaagaaatacgactt 432
             || || ||||| |||||||||||||||||| |||| |||||||||||||| |||||||||
Sbjct: 18509 atttgcaccccctgggatcgataaaccttttggatcttattaaccaaagatatacgactt 18568

                                                                         
Query: 433   tgggctatggttagctcagctccaatcaagaatccccaagggaccccaagaattcttggn 492
             ||  |||| ||||| ||||| |||||||||||||||||||| |  ||||||||| ||   
Sbjct: 18569 tgcactatagttagttcagccccaatcaagaatccccaaggaattccaagaatttttttt 18628

                                                                         
Query: 493   atacgctcattccaatcctcaattctcctttcgagattgggggataatgaatcaattgaa 552
             ||| |||| |||||| ||||||||||  |||| || ||    |||| |||||||||||||
Sbjct: 18629 atatgctcgttccaaccctcaattcttttttctaggttcatcgatattgaatcaattgaa 18688

                                                         
Query: 553   cgcgcttcaaagatttgntccacttttggaagaccttgcgttat 596
             ||| |||| || | ||| ||||||||||||||||| ||||||||
Sbjct: 18689 cgcacttctaacacttgttccacttttggaagaccctgcgttat 18732

---

>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome
          Length = 160928

 Score =  375 bits (189), Expect = e-100
 Identities = 442/530 (83%)
 Strand = Plus / Plus

                                                                         
Query: 67    agaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagctttt 126
             ||||| ||||||||||| | ||||||||||||||| || ||||| |   | |||||||||
Sbjct: 18383 agaacgacgttttcttttaggcctttcaaccaatcgatacgaccccacagagcagctttt 18442

                                                                         
Query: 127   gctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagg 186
             ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||| 
Sbjct: 18443 gctaaaactcgagcagtttcttgaaaactcgcctcggatatgaaactttgagtattcaga 18502

                                                                         
Query: 187   gaagcccttgttattcccaataagattgcccgataatagatcgattcatccaaagctcgc 246
             || || || |||||||||||||| || |  || ||| | || | ||| || ||||| |||
Sbjct: 18503 gacgctctcgttattcccaataaaatggttcggtaacaaatagcttcttcgaaagcacgc 18562

                                                                         
Query: 247   cctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncattagacatt 306
             || | ||||||||||||||| | ||| |||| ||| || |||       |||||||||||
Sbjct: 18563 cccgttcgttccgctcgcaacaatccaattagttctccgggcgaaaaaacattagacatt 18622

                                                                         
Query: 307   ccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctatatgtcta 366
             |||||||| ||||||  |||||||||||||| ||| |||| |||||| |||||||| |||
Sbjct: 18623 ccatcttctgaaaccaacacttttgatgttatttgacgtacaataatttctatatgccta 18682

                                                                         
Query: 367   ttatggatctgtaccccttgggatcgataaacctttnggattttattaaccaaagaaata 426
             ||||||||||| ||||| |||||||||||||||||| |||| |||||||| ||||| |||
Sbjct: 18683 ttatggatctgaaccccctgggatcgataaaccttttggatcttattaactaaagagata 18742

                                                                         
Query: 427   cgactttgggctatggttagctcagctccaatcaagaatccccaagggaccccaagaatt 486
             |||||||| ||||| ||||||||||| ||||| |||||||||||||| |  |||||||||
Sbjct: 18743 cgactttgcgctatagttagctcagcaccaatgaagaatccccaaggaattccaagaatt 18802

                                                                         
Query: 487   cttggnatacgctcattccaatcctcaattctcctttcgagattgggggataatgaatca 546
             ||||  ||| |||| |||||| |||||| |||| |||| || ||    ||||  ||||||
Sbjct: 18803 cttgttatatgctcgttccaaccctcaactctcttttctaggttcatcgatatggaatca 18862

                                                               
Query: 547   attgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttat 596
             || |||||| |||| || | ||| ||||||||||||||||| ||||||||
Sbjct: 18863 atcgaacgcacttctaacacttgttccacttttggaagaccctgcgttat 18912

---

>gb|AY582139.1| Panax ginseng chloroplast, complete genome
          Length = 156318

 Score =  367 bits (185), Expect = 3e-98
 Identities = 441/530 (83%)
 Strand = Plus / Plus

                                                                         
Query: 67    agaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagctttt 126
             ||||| ||||| ||||||| ||||||||||||||| || ||||| ||  | || ||||||
Sbjct: 18071 agaacaacgttctctttcaggcctttcaaccaatcgatacgaccccggagagctgctttt 18130

                                                                         
Query: 127   gctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagg 186
             ||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||| 
Sbjct: 18131 gctaaaactcgagcagtttcttgaaaactcgcttcggatatgaaactttgagtattcaga 18190

                                                                         
Query: 187   gaagcccttgttattcccaataagattgcccgataatagatcgattcatccaaagctcgc 246
             || ||  ||||||||||||||||||  ||  | ||| |||||| ||| |||||||| || 
Sbjct: 18191 gatgcttttgttattcccaataagacggcttggtaacagatcgcttcttccaaagcgcga 18250

                                                                         
Query: 247   cctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncattagacatt 306
             ||   ||||||||||||||| | ||| || ||||| || ||        |||||||||| 
Sbjct: 18251 cccattcgttccgctcgcaacaatccaataaattctccgggtaaaaaaacattagacatc 18310

                                                                         
Query: 307   ccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctatatgtcta 366
             |||||||| ||||||  |||||||||||||| ||| |||| |||||| |||||||| |||
Sbjct: 18311 ccatcttctgaaaccaacacttttgatgttatttgacgtacaataatttctatatgccta 18370

                                                                         
Query: 367   ttatggatctgtaccccttgggatcgataaacctttnggattttattaaccaaagaaata 426
             ||||||||||| ||||| |||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 18371 ttatggatctgcaccccctgggatcgataaaccttttggatcttattaaccaaagaaata 18430

                                                                         
Query: 427   cgactttgggctatggttagctcagctccaatcaagaatccccaagggaccccaagaatt 486
             ||||||||  |||| ||||||||||| |||||||||||||||||||| |  |||||| ||
Sbjct: 18431 cgactttgcactatagttagctcagccccaatcaagaatccccaaggaattccaagattt 18490

                                                                         
Query: 487   cttggnatacgctcattccaatcctcaattctcctttcgagattgggggataatgaatca 546
             ||||  ||||  || |||||  ||||||  ||| ||||||||||    |||| |||||||
Sbjct: 18491 cttgttatacattcgttccagccctcaaccctcttttcgagattcatcgatattgaatca 18550

                                                               
Query: 547   attgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttat 596
             || |||||| |||| || |  || || |||||||||||||| ||||||||
Sbjct: 18551 atcgaacgcacttctaacacctgttcgacttttggaagaccctgcgttat 18600

---

>gb|DQ069541.1| Acorus americanus RNA polymerase beta'' chain (rpoC2) gene, partial
            cds; chloroplast
          Length = 4158

 Score =  359 bits (181), Expect = 7e-96
 Identities = 440/530 (83%)
 Strand = Plus / Minus

                                                                        
Query: 67   agaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagctttt 126
            ||||| ||||| ||||||| |||||||||||||||||  ||||| ||| | || ||||||
Sbjct: 3944 agaacaacgttctctttcaggcctttcaaccaatcaacacgaccccgtagagccgctttt 3885

                                                                        
Query: 127  gctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagg 186
            || |||||||||||||||||||||||||| ||||| |||||||||||||| |||||||  
Sbjct: 3884 gccaaaactcgagcagtttcttgaaaactcgcttcggatatgaaactttgagtattcaaa 3825

                                                                        
Query: 187  gaagcccttgttattcccaataagattgcccgataatagatcgattcatccaaagctcgc 246
            || || ||||||||||||||||||||||| |||||| |||||| ||| |||||||| || 
Sbjct: 3824 gacgctcttgttattcccaataagattgctcgataacagatcgcttcttccaaagcgcga 3765

                                                                        
Query: 247  cctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncattagacatt 306
            |||| ||||||||| ||||| | |||||| | ||| || ||        |||||||||||
Sbjct: 3764 cctgttcgttccgcccgcaacaatccgataagttctcccggtgaaaaaacattagacatt 3705

                                                                        
Query: 307  ccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctatatgtcta 366
            |||||||| ||||||  |||||||||||||| ||| |||| |||||||||||||||  ||
Sbjct: 3704 ccatcttctgaaaccaacacttttgatgttatttgacgtacaataatctctatatgctta 3645

                                                                        
Query: 367  ttatggatctgtaccccttgggatcgataaacctttnggattttattaaccaaagaaata 426
            ||||| ||||| ||||| || ||||||||||| ||| |||| |||||||||||||| |||
Sbjct: 3644 ttatgaatctgcaccccctgagatcgataaactttttggatcttattaaccaaagagata 3585

                                                                        
Query: 427  cgactttgggctatggttagctcagctccaatcaagaatccccaagggaccccaagaatt 486
            |||||||| |||||||||| ||| || || |||||||||||||| || |  |||||||||
Sbjct: 3584 cgactttgcgctatggttaactcggcgccgatcaagaatccccagggaattccaagaatt 3525

                                                                        
Query: 487  cttggnatacgctcattccaatcctcaattctcctttcgagattgggggataatgaatca 546
             |||  ||| | || |||||| | ||||  ||  ||||||| || |  ||||  ||||||
Sbjct: 3524 tttgttatatgttcgttccaaccttcaacccttttttcgaggttcgtcgatatggaatca 3465

                                                              
Query: 547  attgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttat 596
            ||||||||  |||| || | ||| || |||||||||||||| ||||||||
Sbjct: 3464 attgaacgtacttctaacacttgttctacttttggaagaccctgcgttat 3415

---

>emb|AJ879453.1| Acorus calamus chloroplast, complete genome
          Length = 153821

 Score =  359 bits (181), Expect = 7e-96
 Identities = 440/530 (83%)
 Strand = Plus / Plus

                                                                         
Query: 67    agaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagctttt 126
             ||||| ||||| ||||||| |||||||||||||||||  ||||| ||| | || ||||||
Sbjct: 16885 agaacaacgttctctttcaggcctttcaaccaatcaacacgaccccgtagagccgctttt 16944

                                                                         
Query: 127   gctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagg 186
             || |||||||||||||||||||||||||| ||||| |||||||||||||| |||||||  
Sbjct: 16945 gccaaaactcgagcagtttcttgaaaactcgcttcggatatgaaactttgagtattcaaa 17004

                                                                         
Query: 187   gaagcccttgttattcccaataagattgcccgataatagatcgattcatccaaagctcgc 246
             || || ||||||||||||||||||||||| |||||| |||||| ||| |||||||| || 
Sbjct: 17005 gacgctcttgttattcccaataagattgctcgataacagatcgcttcttccaaagcgcga 17064

                                                                         
Query: 247   cctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncattagacatt 306
             |||| ||||||||| ||||| | |||||| | ||| || ||        |||||||||||
Sbjct: 17065 cctgttcgttccgcccgcaacaatccgataagttctcccggtgaaaaaacattagacatt 17124

                                                                         
Query: 307   ccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctatatgtcta 366
             |||||||| ||||||  |||||||||||||| ||| |||| |||||||||||||||  ||
Sbjct: 17125 ccatcttctgaaaccaacacttttgatgttatttgacgtacaataatctctatatgctta 17184

                                                                         
Query: 367   ttatggatctgtaccccttgggatcgataaacctttnggattttattaaccaaagaaata 426
             ||||| ||||| ||||| || ||||||||||| ||| |||| |||||||||||||| |||
Sbjct: 17185 ttatgaatctgcaccccctgagatcgataaactttttggatcttattaaccaaagagata 17244

                                                                         
Query: 427   cgactttgggctatggttagctcagctccaatcaagaatccccaagggaccccaagaatt 486
             |||||||| |||||||||| ||| || || |||||||||||||| || |  |||||||||
Sbjct: 17245 cgactttgcgctatggttaactcggcgccgatcaagaatccccagggaattccaagaatt 17304

                                                                         
Query: 487   cttggnatacgctcattccaatcctcaattctcctttcgagattgggggataatgaatca 546
              |||  ||| | || |||||| | ||||  ||  ||||||| || |  ||||  ||||||
Sbjct: 17305 tttgttatatgttcgttccaaccttcaacccttttttcgaggttcgtcgatatggaatca 17364

                                                               
Query: 547   attgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttat 596
             ||||||||  |||| || | ||| || |||||||||||||| ||||||||
Sbjct: 17365 attgaacgtacttctaacacttgttctacttttggaagaccctgcgttat 17414

---

>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence
          Length = 124033

 Score =  357 bits (180), Expect = 3e-95
 Identities = 424/509 (83%)
 Strand = Plus / Plus

                                                                         
Query: 88    cctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaaactcgagcagtttct 147
             ||||||||||||||||| ||||| ||  | || |||||||||||||||| ||||||||||
Sbjct: 79536 cctttcaaccaatcaatacgaccccgaagagcggcttttgctaaaactctagcagtttct 79595

                                                                         
Query: 148   tgaaaacttgcttcagatatgaaactttgggtattcagggaagcccttgttattcccaat 207
             |||||||| ||||| |||||||||||||| |||||||| || |   ||||||||||||||
Sbjct: 79596 tgaaaactcgcttcggatatgaaactttgagtattcagagatgtttttgttattcccaat 79655

                                                                         
Query: 208   aagattgcccgataatagatcgattcatccaaagctcgccctgctcgttccgctcgcaat 267
             || |  || || ||| | || | ||| ||||| || ||||| | |||||| |||||||||
Sbjct: 79656 aataaagctcggtaacaaattgcttcttccaaggcacgcccagttcgttctgctcgcaat 79715

                                                                         
Query: 268   agtccgattaattccccaggcnnnnnnncattagacattccatcttcggaaacccgcact 327
             | ||| |||||||| || ||        ||||||||||||||||||| ||||||   |||
Sbjct: 79716 aatccaattaattcaccgggtaaaaatacattagacattccatcttctgaaaccaagact 79775

                                                                         
Query: 328   tttgatgttacttggcgtataataatctctatatgtctattatggatctgtaccccttgg 387
             || ||||||| ||| || | |||||| || ||||||||||||||||| ||||| || |||
Sbjct: 79776 ttggatgttatttgacgcacaataatttcgatatgtctattatggatgtgtactccctgg 79835

                                                                         
Query: 388   gatcgataaacctttnggattttattaaccaaagaaatacgactttgggctatggttagc 447
             ||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 79836 gatcgataaaccttttggattttattaaccaaagaaatacgactttgcgctatagttagc 79895

                                                                         
Query: 448   tcagctccaatcaagaatccccaagggaccccaagaattcttggnatacgctcattccaa 507
             ||||| |||||||||||||||||||| |  || ||||||||||  |||| ||||||||||
Sbjct: 79896 tcagcaccaatcaagaatccccaaggaatgccgagaattcttgttatacactcattccaa 79955

                                                                         
Query: 508   tcctcaattctcctttcgagattgggggataatgaatcaattgaacgcgcttcaaagatt 567
              | ||||||||  ||||||||||    |||| ||||||||| |||||   ||| || || 
Sbjct: 79956 gcatcaattcttttttcgagattcatcgatattgaatcaatcgaacgtatttctaatatc 80015

                                          
Query: 568   tgntccacttttggaagaccttgcgttat 596
             || |||||||||||||||||||| |||||
Sbjct: 80016 tgttccacttttggaagaccttgtgttat 80044

---

>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome
          Length = 155460

 Score =  355 bits (179), Expect = 1e-94
 Identities = 435/524 (83%)
 Strand = Plus / Plus

                                                                         
Query: 73    acgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaa 132
             ||||| ||||||| ||||||||||||||| || ||||| ||  | || ||||||||||||
Sbjct: 16981 acgttctctttcaggcctttcaaccaatcgatacgaccccggagagccgcttttgctaaa 17040

                                                                         
Query: 133   actcgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagggaagcc 192
             |||||||||||||||||||||||||||||||||||||||||||| ||||| || || || 
Sbjct: 17041 actcgagcagtttcttgaaaacttgcttcagatatgaaactttgagtattgagagatgct 17100

                                                                         
Query: 193   cttgttattcccaataagattgcccgataatagatcgattcatccaaagctcgccctgct 252
             |||||||||||||||||||   | || ||| |||||| ||| |||||||| |||||   |
Sbjct: 17101 cttgttattcccaataagacgactcggtaacagatcgcttcttccaaagcgcgccccatt 17160

                                                                         
Query: 253   cgttccgctcgcaatagtccgattaattccccaggcnnnnnnncattagacattccatct 312
             ||||| |||||||| | ||| || | ||| || ||        |||||||||||||||||
Sbjct: 17161 cgttctgctcgcaacaatccaataagttctccgggtgaaaaaacattagacattccatct 17220

                                                                         
Query: 313   tcggaaacccgcacttttgatgttacttggcgtataataatctctatatgtctattatgg 372
             || |||| |  |||||||||||||| ||| |||| |||||| |||||||| |||||||| 
Sbjct: 17221 tctgaaatcaacacttttgatgttatttgacgtacaataatttctatatgcctattatga 17280

                                                                         
Query: 373   atctgtaccccttgggatcgataaacctttnggattttattaaccaaagaaatacgactt 432
             ||||| ||||| ||||| |||||||||| | ||||||||||||||||||| || || |||
Sbjct: 17281 atctgcaccccctgggagcgataaacctgttggattttattaaccaaagagattcggctt 17340

                                                                         
Query: 433   tgggctatggttagctcagctccaatcaagaatccccaagggaccccaagaattcttggn 492
             || ||||| ||||||||||| |||||||||||||||||||| |  |||||||||||||| 
Sbjct: 17341 tgcgctatagttagctcagcaccaatcaagaatccccaaggaattccaagaattcttggt 17400

                                                                         
Query: 493   atacgctcattccaatcctcaattctcctttcgagattgggggataatgaatcaattgaa 552
             ||||  |  |||||| ||||||  ||| |||| |||||   ||||| ||||||||| |||
Sbjct: 17401 atacatttgttccaaccctcaaccctcttttctagattcatggatattgaatcaatcgaa 17460

                                                         
Query: 553   cgcgcttcaaagatttgntccacttttggaagaccttgcgttat 596
             ||| |||| ||||  || || |||||||||||||| || |||||
Sbjct: 17461 cgcacttctaagacctgttctacttttggaagaccctgtgttat 17504

---

>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome
          Length = 155461

 Score =  355 bits (179), Expect = 1e-94
 Identities = 435/524 (83%)
 Strand = Plus / Plus

                                                                         
Query: 73    acgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaa 132
             ||||| ||||||| ||||||||||||||| || ||||| ||  | || ||||||||||||
Sbjct: 16978 acgttctctttcaggcctttcaaccaatcgatacgaccccggagagccgcttttgctaaa 17037

                                                                         
Query: 133   actcgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagggaagcc 192
             |||||||||||||||||||||||||||||||||||||||||||| ||||| || || || 
Sbjct: 17038 actcgagcagtttcttgaaaacttgcttcagatatgaaactttgagtattgagagatgct 17097

                                                                         
Query: 193   cttgttattcccaataagattgcccgataatagatcgattcatccaaagctcgccctgct 252
             |||||||||||||||||||   | || ||| |||||| ||| |||||||| |||||   |
Sbjct: 17098 cttgttattcccaataagacgactcggtaacagatcgcttcttccaaagcgcgccccatt 17157

                                                                         
Query: 253   cgttccgctcgcaatagtccgattaattccccaggcnnnnnnncattagacattccatct 312
             ||||| |||||||| | ||| || | ||| || ||        |||||||||||||||||
Sbjct: 17158 cgttctgctcgcaacaatccaataagttctccgggtgaaaaaacattagacattccatct 17217

                                                                         
Query: 313   tcggaaacccgcacttttgatgttacttggcgtataataatctctatatgtctattatgg 372
             || |||| |  |||||||||||||| ||| |||| |||||| |||||||| |||||||| 
Sbjct: 17218 tctgaaatcaacacttttgatgttatttgacgtacaataatttctatatgcctattatga 17277

                                                                         
Query: 373   atctgtaccccttgggatcgataaacctttnggattttattaaccaaagaaatacgactt 432
             ||||| ||||| ||||| |||||||||| | ||||||||||||||||||| || || |||
Sbjct: 17278 atctgcaccccctgggagcgataaacctgttggattttattaaccaaagagattcggctt 17337

                                                                         
Query: 433   tgggctatggttagctcagctccaatcaagaatccccaagggaccccaagaattcttggn 492
             || ||||| ||||||||||| |||||||||||||||||||| |  |||||||||||||| 
Sbjct: 17338 tgcgctatagttagctcagcaccaatcaagaatccccaaggaattccaagaattcttggt 17397

                                                                         
Query: 493   atacgctcattccaatcctcaattctcctttcgagattgggggataatgaatcaattgaa 552
             ||||  |  |||||| ||||||  ||| |||| |||||   ||||| ||||||||| |||
Sbjct: 17398 atacatttgttccaaccctcaaccctcttttctagattcatggatattgaatcaatcgaa 17457

                                                         
Query: 553   cgcgcttcaaagatttgntccacttttggaagaccttgcgttat 596
             ||| |||| ||||  || || |||||||||||||| || |||||
Sbjct: 17458 cgcacttctaagacctgttctacttttggaagaccctgtgttat 17501

---

>gb|DQ069543.1| Nuphar advena RNA polymerase beta'' chain (rpoC2) gene, partial cds;
            chloroplast
          Length = 4170

 Score =  353 bits (178), Expect = 4e-94
 Identities = 349/409 (85%)
 Strand = Plus / Minus

                                                                        
Query: 79   tctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaaactcga 138
            ||||||| |||||||||||||||||| ||||| ||  | || ||||||||||||||||||
Sbjct: 3950 tctttcaggcctttcaaccaatcaatacgaccccggagagcggcttttgctaaaactcga 3891

                                                                        
Query: 139  gcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagggaagcccttgtt 198
            || ||||| |||||||| ||||| |||||||||||||| |||||||| || || || |||
Sbjct: 3890 gcggtttcctgaaaactagcttctgatatgaaactttgagtattcagagatgctctcgtt 3831

                                                                        
Query: 199  attcccaataagattgcccgataatagatcgattcatccaaagctcgccctgctcgttcc 258
            |||||||||||||  || || ||| | || |  || |||||||| || ||||||||||| 
Sbjct: 3830 attcccaataagacggctcggtaacaaatagcctcttccaaagcacgacctgctcgttct 3771

                                                                        
Query: 259  gctcgcaatagtccgattaattccccaggcnnnnnnncattagacattccatcttcggaa 318
            |||||||| | |||||||| |||||| ||        ||||||||||||||||||| |||
Sbjct: 3770 gctcgcaacaatccgattagttccccgggtgaaaaaacattagacattccatcttctgaa 3711

                                                                        
Query: 319  acccgcacttttgatgttacttggcgtataataatctctatatgtctattatggatctgt 378
            |||  |||||||||||||| ||| |||| ||||||||||||||| |||||||| ||||||
Sbjct: 3710 accaacacttttgatgttatttgtcgtacaataatctctatatgcctattatgaatctgt 3651

                                                                        
Query: 379  accccttgggatcgataaacctttnggattttattaaccaaagaaatacgactttgggct 438
            ||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| |||
Sbjct: 3650 accccctgggatcgataaaccttttggatcttattaaccaaagaaatacgactttgcgct 3591

                                                             
Query: 439  atggttagctcagctccaatcaagaatccccaagggaccccaagaattc 487
            ||||| || ||||| ||||||| |||||||||||| |  ||||||||||
Sbjct: 3590 atggtgagttcagcaccaatcaggaatccccaaggaattccaagaattc 3542

---

>gb|AY757830.1|AY757829S2 Acorus gramineus RpoC2 (rpoC2) gene, partial cds; chloroplast
          Length = 1809

 Score =  351 bits (177), Expect = 2e-93
 Identities = 439/530 (82%)
 Strand = Plus / Minus

                                                                        
Query: 67   agaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagctttt 126
            ||||| ||||| ||||||| |||||||||||||||||  ||||| ||| | || ||||||
Sbjct: 1592 agaacaacgttctctttcaggcctttcaaccaatcaacacgaccccgtagagccgctttt 1533

                                                                        
Query: 127  gctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagg 186
            || |||||||||||||||||||||||||| ||||| |||||||||||||| |||||||  
Sbjct: 1532 gccaaaactcgagcagtttcttgaaaactcgcttcggatatgaaactttgagtattcaaa 1473

                                                                        
Query: 187  gaagcccttgttattcccaataagattgcccgataatagatcgattcatccaaagctcgc 246
            || || ||||||||||||||||||||||| ||||||  ||||| ||| |||||||| || 
Sbjct: 1472 gacgctcttgttattcccaataagattgctcgataacggatcgcttcttccaaagcgcga 1413

                                                                        
Query: 247  cctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncattagacatt 306
            |||| ||||||||| ||||| | |||||| | ||| || ||        |||||||||||
Sbjct: 1412 cctgttcgttccgcccgcaacaatccgataagttctcccggtgaaaaaacattagacatt 1353

                                                                        
Query: 307  ccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctatatgtcta 366
            |||||||| ||||||  |||||||||||||| ||| |||| |||||||||||||||  ||
Sbjct: 1352 ccatcttctgaaaccaacacttttgatgttatttgacgtacaataatctctatatgctta 1293

                                                                        
Query: 367  ttatggatctgtaccccttgggatcgataaacctttnggattttattaaccaaagaaata 426
            ||||| ||||| ||||| || ||||||||||| ||| |||| |||||||||||||| |||
Sbjct: 1292 ttatgaatctgcaccccctgagatcgataaactttttggatcttattaaccaaagagata 1233

                                                                        
Query: 427  cgactttgggctatggttagctcagctccaatcaagaatccccaagggaccccaagaatt 486
            |||||||| |||||||||| ||| || || |||||||||||||| || |  |||||||||
Sbjct: 1232 cgactttgcgctatggttaactcggcgccgatcaagaatccccagggaattccaagaatt 1173

                                                                        
Query: 487  cttggnatacgctcattccaatcctcaattctcctttcgagattgggggataatgaatca 546
             |||  ||| | || |||||| | ||||  ||  ||||||| || |  ||||  ||||||
Sbjct: 1172 tttgttatatgttcgttccaaccttcaacccttttttcgaggttcgtcgatatggaatca 1113

                                                              
Query: 547  attgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttat 596
            ||||||||  |||| || | ||| || |||||||||||||| ||||||||
Sbjct: 1112 attgaacgtacttctaacacttgttctacttttggaagaccctgcgttat 1063

---

>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome
          Length = 151104

 Score =  351 bits (177), Expect = 2e-93
 Identities = 439/530 (82%)
 Strand = Plus / Minus

                                                                         
Query: 67    agaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagctttt 126
             ||||| ||||||||||| | ||||||||||||||| || || ||| |  | || ||||||
Sbjct: 23135 agaacaacgttttcttttaggcctttcaaccaatcgatacgccctaggagagctgctttt 23076

                                                                         
Query: 127   gctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagg 186
             |||||||||||||| |||||||||||||| ||||| |||||||||||||| ||||||| |
Sbjct: 23075 gctaaaactcgagcggtttcttgaaaactcgcttcggatatgaaactttgagtattcatg 23016

                                                                         
Query: 187   gaagcccttgttattcccaataagattgcccgataatagatcgattcatccaaagctcgc 246
             || || |||||||||||||||||||  ||  | ||| |||||| ||| |||||||| |||
Sbjct: 23015 gatgctcttgttattcccaataagacggcttggtaacagatcgcttcttccaaagcgcgc 22956

                                                                         
Query: 247   cctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncattagacatt 306
             ||   ||||||||||||||| | ||| |||| ||| || |||       |||||||||||
Sbjct: 22955 cccattcgttccgctcgcaacaatccaattagttctccgggcgaaaaaacattagacatt 22896

                                                                         
Query: 307   ccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctatatgtcta 366
              ||||||| ||||||  |||||||||||||| ||| |||| |||||| |||||||| |||
Sbjct: 22895 tcatcttctgaaaccaacacttttgatgttatttgacgtacaataatttctatatgccta 22836

                                                                         
Query: 367   ttatggatctgtaccccttgggatcgataaacctttnggattttattaaccaaagaaata 426
             ||||| ||||| ||||| |||||||||||||||||| |||  |||||||||||||| |||
Sbjct: 22835 ttatgtatctgcaccccctgggatcgataaaccttttggaccttattaaccaaagagata 22776

                                                                         
Query: 427   cgactttgggctatggttagctcagctccaatcaagaatccccaagggaccccaagaatt 486
             ||||||||  |||| ||||||| ||| ||||| |||||| ||||||| |  |||||||||
Sbjct: 22775 cgactttgcactatagttagcttagcaccaataaagaatgcccaaggaattccaagaatt 22716

                                                                         
Query: 487   cttggnatacgctcattccaatcctcaattctcctttcgagattgggggataatgaatca 546
             ||||  ||||  |  |||||| ||||||| ||| |||| |||||    |||| |||||||
Sbjct: 22715 cttgttatacatttgttccaaccctcaatcctcttttcaagattcatcgatattgaatca 22656

                                                               
Query: 547   attgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttat 596
             || |||||| |||| || |  || ||||||||||||||||||||||||||
Sbjct: 22655 atcgaacgcacttctaacacctgttccacttttggaagaccttgcgttat 22606

---

>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan)
          Length = 156687

 Score =  347 bits (175), Expect = 3e-92
 Identities = 434/524 (82%)
 Strand = Plus / Plus

                                                                         
Query: 73    acgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaa 132
             ||||| ||||||| ||||||||||||||| || ||||| ||  | || ||||||||||||
Sbjct: 17161 acgttctctttcaggcctttcaaccaatcgatacgaccccggagagccgcttttgctaaa 17220

                                                                         
Query: 133   actcgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagggaagcc 192
             ||||||||||||||||||||||| |||||||||||||||||||| ||||| || || || 
Sbjct: 17221 actcgagcagtttcttgaaaactcgcttcagatatgaaactttgagtattgagagatgct 17280

                                                                         
Query: 193   cttgttattcccaataagattgcccgataatagatcgattcatccaaagctcgccctgct 252
             |||||||||||||||||||   | || ||| |||||| ||| |||||||| |||||   |
Sbjct: 17281 cttgttattcccaataagacgactcggtaacagatcgcttcttccaaagcgcgccccatt 17340

                                                                         
Query: 253   cgttccgctcgcaatagtccgattaattccccaggcnnnnnnncattagacattccatct 312
             ||||| |||||||| | ||| || | ||| || ||        |||||||||||||||||
Sbjct: 17341 cgttctgctcgcaacaatccaataagttctccgggtgaaaaaacattagacattccatct 17400

                                                                         
Query: 313   tcggaaacccgcacttttgatgttacttggcgtataataatctctatatgtctattatgg 372
             || ||||||  |||||||||||||| ||| |||| |||||| ||||||||||||||||| 
Sbjct: 17401 tctgaaaccaacacttttgatgttatttgacgtacaataatttctatatgtctattatga 17460

                                                                         
Query: 373   atctgtaccccttgggatcgataaacctttnggattttattaaccaaagaaatacgactt 432
             ||||| ||||| ||||| |||||||||| | ||||||||||||||||||| || || |||
Sbjct: 17461 atctgcaccccctgggagcgataaacctgttggattttattaaccaaagagattcggctt 17520

                                                                         
Query: 433   tgggctatggttagctcagctccaatcaagaatccccaagggaccccaagaattcttggn 492
             || ||||| ||||||||||| |||||||||||||||||||| |  |||||||||||||  
Sbjct: 17521 tgcgctatagttagctcagcaccaatcaagaatccccaaggaattccaagaattcttgtt 17580

                                                                         
Query: 493   atacgctcattccaatcctcaattctcctttcgagattgggggataatgaatcaattgaa 552
             ||||  |  |||||| ||||||  ||| |||| |||||   ||||| ||||||||| |||
Sbjct: 17581 atacatttgttccaaccctcaaccctcttttctagattcatggatattgaatcaatcgaa 17640

                                                         
Query: 553   cgcgcttcaaagatttgntccacttttggaagaccttgcgttat 596
             ||| |||| || |  || || |||||||||||||| || |||||
Sbjct: 17641 cgcacttctaacacctgttctacttttggaagaccctgtgttat 17684

---

>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome
          Length = 155298

 Score =  347 bits (175), Expect = 3e-92
 Identities = 434/524 (82%)
 Strand = Plus / Plus

                                                                         
Query: 73    acgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaa 132
             ||||| ||||||| ||||||||||||||| || ||||| ||  | || ||||||||||||
Sbjct: 17123 acgttctctttcaggcctttcaaccaatcgatacgaccccggagagccgcttttgctaaa 17182

                                                                         
Query: 133   actcgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagggaagcc 192
             |||||||||||||||||||||||||||||||||||||||||||| ||||| || || || 
Sbjct: 17183 actcgagcagtttcttgaaaacttgcttcagatatgaaactttgagtattgagagatgct 17242

                                                                         
Query: 193   cttgttattcccaataagattgcccgataatagatcgattcatccaaagctcgccctgct 252
             |||||||||||||||||||   | || ||| |||||| ||| |||||||| |||||   |
Sbjct: 17243 cttgttattcccaataagacgactcggtaacagatcgcttcttccaaagcgcgccccatt 17302

                                                                         
Query: 253   cgttccgctcgcaatagtccgattaattccccaggcnnnnnnncattagacattccatct 312
             ||||| |||||||| | ||| || | ||| || ||        |||||||||||||||||
Sbjct: 17303 cgttctgctcgcaacaatccaataagttctccgggtgaaaaaacattagacattccatct 17362

                                                                         
Query: 313   tcggaaacccgcacttttgatgttacttggcgtataataatctctatatgtctattatgg 372
             || |||| |  |||||||||||||| ||| |||| |||||| |||||||| |||||||| 
Sbjct: 17363 tctgaaatcaacacttttgatgttatttgacgtacaataatttctatatgcctattatga 17422

                                                                         
Query: 373   atctgtaccccttgggatcgataaacctttnggattttattaaccaaagaaatacgactt 432
             ||||| ||||| ||||| |||||||||| | ||||||||||||||||||| || || |||
Sbjct: 17423 atctgcaccccctgggagcgataaacctgttggattttattaaccaaagagattcggctt 17482

                                                                         
Query: 433   tgggctatggttagctcagctccaatcaagaatccccaagggaccccaagaattcttggn 492
             || ||||| ||||||||||| |||||||||||||||||||| |  |||||||||||||| 
Sbjct: 17483 tgcgctatagttagctcagcaccaatcaagaatccccaaggaattccaagaattcttggt 17542

                                                                         
Query: 493   atacgctcattccaatcctcaattctcctttcgagattgggggataatgaatcaattgaa 552
             ||||  |  ||||||  |||||  ||| |||| |||||   ||||| ||||||||| |||
Sbjct: 17543 atacatttgttccaactctcaaccctcttttctagattcatggatattgaatcaatcgaa 17602

                                                         
Query: 553   cgcgcttcaaagatttgntccacttttggaagaccttgcgttat 596
             ||| |||| ||||  || || |||||||||||||| || |||||
Sbjct: 17603 cgcacttctaagacctgttctacttttggaagaccctgtgttat 17646

---

>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome
          Length = 155371

 Score =  347 bits (175), Expect = 3e-92
 Identities = 434/524 (82%)
 Strand = Plus / Plus

                                                                         
Query: 73    acgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaa 132
             ||||| ||||||| ||||||||||||||| || ||||| ||  | || ||||||||||||
Sbjct: 17011 acgttctctttcaggcctttcaaccaatcgatacgaccccggagagccgcttttgctaaa 17070

                                                                         
Query: 133   actcgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagggaagcc 192
             |||||||||||||||||||||||||||||||||||||||||||| ||||| || || || 
Sbjct: 17071 actcgagcagtttcttgaaaacttgcttcagatatgaaactttgagtattgagagatgct 17130

                                                                         
Query: 193   cttgttattcccaataagattgcccgataatagatcgattcatccaaagctcgccctgct 252
             |||||||||||||||||||   | || ||| |||||| ||| |||||||| |||||   |
Sbjct: 17131 cttgttattcccaataagacgactcggtaacagatcgcttcttccaaagcgcgccccatt 17190

                                                                         
Query: 253   cgttccgctcgcaatagtccgattaattccccaggcnnnnnnncattagacattccatct 312
             ||||| |||||||| | ||| || | ||| || ||        |||||||||||||||||
Sbjct: 17191 cgttctgctcgcaacaatccaataagttctccgggtgaaaaaacattagacattccatct 17250

                                                                         
Query: 313   tcggaaacccgcacttttgatgttacttggcgtataataatctctatatgtctattatgg 372
             || |||| |  |||||||||||||| ||| |||| |||||| |||||||| |||||||| 
Sbjct: 17251 tctgaaatcaacacttttgatgttatttgacgtacaataatttctatatgcctattatga 17310

                                                                         
Query: 373   atctgtaccccttgggatcgataaacctttnggattttattaaccaaagaaatacgactt 432
             ||||| ||||| ||||| |||||||||| | ||||||||||||||||||| || || |||
Sbjct: 17311 atctgcaccccctgggagcgataaacctgttggattttattaaccaaagagattcggctt 17370

                                                                         
Query: 433   tgggctatggttagctcagctccaatcaagaatccccaagggaccccaagaattcttggn 492
             || ||||| ||||||||||| |||||||||||||||||||| |  |||||||||||||| 
Sbjct: 17371 tgcgctatagttagctcagcaccaatcaagaatccccaaggaattccaagaattcttggt 17430

                                                                         
Query: 493   atacgctcattccaatcctcaattctcctttcgagattgggggataatgaatcaattgaa 552
             ||||  |  ||||||  |||||  ||| |||| |||||   ||||| ||||||||| |||
Sbjct: 17431 atacatttgttccaactctcaaccctcttttctagattcatggatattgaatcaatcgaa 17490

                                                         
Query: 553   cgcgcttcaaagatttgntccacttttggaagaccttgcgttat 596
             ||| |||| ||||  || || |||||||||||||| || |||||
Sbjct: 17491 cgcacttctaagacctgttctacttttggaagaccctgtgttat 17534

---

>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence
          Length = 155745

 Score =  347 bits (175), Expect = 3e-92
 Identities = 434/524 (82%)
 Strand = Plus / Plus

                                                                         
Query: 73    acgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaa 132
             ||||| ||||||| ||||||||||||||| || ||||| ||  | || ||||||||||||
Sbjct: 17340 acgttctctttcaggcctttcaaccaatcgatacgaccccgaagagccgcttttgctaaa 17399

                                                                         
Query: 133   actcgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagggaagcc 192
             ||||||||||| ||||||||||| |||||||||||||||||||| ||||| || || || 
Sbjct: 17400 actcgagcagtctcttgaaaactcgcttcagatatgaaactttgagtattgagagatgct 17459

                                                                         
Query: 193   cttgttattcccaataagattgcccgataatagatcgattcatccaaagctcgccctgct 252
             |||||||||||||||||||   | || ||| |||||| ||| |||||||| |||||   |
Sbjct: 17460 cttgttattcccaataagacgactcggtaacagatcgcttcttccaaagcgcgccccatt 17519

                                                                         
Query: 253   cgttccgctcgcaatagtccgattaattccccaggcnnnnnnncattagacattccatct 312
             ||||| |||||||| | ||| || | ||| || ||        |||||||||||||||||
Sbjct: 17520 cgttctgctcgcaacaatccaataagttctccgggtgaaaaaacattagacattccatct 17579

                                                                         
Query: 313   tcggaaacccgcacttttgatgttacttggcgtataataatctctatatgtctattatgg 372
             || ||||||  |||||||||||||| ||| |||| |||||| |||||||| |||||||| 
Sbjct: 17580 tctgaaaccaacacttttgatgttatttgacgtacaataatttctatatgcctattatga 17639

                                                                         
Query: 373   atctgtaccccttgggatcgataaacctttnggattttattaaccaaagaaatacgactt 432
             ||||| ||||| ||||| |||||||||| | ||||||||||||||||||| || || |||
Sbjct: 17640 atctgcaccccctgggagcgataaacctgttggattttattaaccaaagagattcggctt 17699

                                                                         
Query: 433   tgggctatggttagctcagctccaatcaagaatccccaagggaccccaagaattcttggn 492
             || ||||| ||||||||||| |||||||||||||||||||| |  |||||||||||||  
Sbjct: 17700 tgcgctatagttagctcagcaccaatcaagaatccccaaggaattccaagaattcttgtt 17759

                                                                         
Query: 493   atacgctcattccaatcctcaattctcctttcgagattgggggataatgaatcaattgaa 552
             ||||  |  |||||| ||||||| ||| |||| |||||   ||||| ||||||||| |||
Sbjct: 17760 atacatttgttccaaccctcaatcctcttttctagattcatggatattgaatcaatcgaa 17819

                                                         
Query: 553   cgcgcttcaaagatttgntccacttttggaagaccttgcgttat 596
             ||| |||| || |  || || ||||||||||||||||| |||||
Sbjct: 17820 cgcacttctaatacctgttctacttttggaagaccttgtgttat 17863

---

>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome
          Length = 155312

 Score =  347 bits (175), Expect = 3e-92
 Identities = 434/524 (82%)
 Strand = Plus / Plus

                                                                         
Query: 73    acgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaa 132
             ||||| ||||||| ||||||||||||||| || ||||| ||  | || ||||||||||||
Sbjct: 17123 acgttctctttcaggcctttcaaccaatcgatacgaccccggagagccgcttttgctaaa 17182

                                                                         
Query: 133   actcgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagggaagcc 192
             |||||||||||||||||||||||||||||||||||||||||||| ||||| || || || 
Sbjct: 17183 actcgagcagtttcttgaaaacttgcttcagatatgaaactttgagtattgagagatgct 17242

                                                                         
Query: 193   cttgttattcccaataagattgcccgataatagatcgattcatccaaagctcgccctgct 252
             |||||||||||||||||||   | || ||| |||||| ||| |||||||| |||||   |
Sbjct: 17243 cttgttattcccaataagacgactcggtaacagatcgcttcttccaaagcgcgccccatt 17302

                                                                         
Query: 253   cgttccgctcgcaatagtccgattaattccccaggcnnnnnnncattagacattccatct 312
             ||||| |||||||| | ||| || | ||| || ||        |||||||||||||||||
Sbjct: 17303 cgttctgctcgcaacaatccaataagttctccgggtgaaaaaacattagacattccatct 17362

                                                                         
Query: 313   tcggaaacccgcacttttgatgttacttggcgtataataatctctatatgtctattatgg 372
             || |||| |  |||||||||||||| ||| |||| |||||| |||||||| |||||||| 
Sbjct: 17363 tctgaaatcaacacttttgatgttatttgacgtacaataatttctatatgcctattatga 17422

                                                                         
Query: 373   atctgtaccccttgggatcgataaacctttnggattttattaaccaaagaaatacgactt 432
             ||||| ||||| ||||| |||||||||| | ||||||||||||||||||| || || |||
Sbjct: 17423 atctgcaccccctgggagcgataaacctgttggattttattaaccaaagagattcggctt 17482

                                                                         
Query: 433   tgggctatggttagctcagctccaatcaagaatccccaagggaccccaagaattcttggn 492
             || ||||| ||||||||||| |||||||||||||||||||| |  |||||||||||||| 
Sbjct: 17483 tgcgctatagttagctcagcaccaatcaagaatccccaaggaattccaagaattcttggt 17542

                                                                         
Query: 493   atacgctcattccaatcctcaattctcctttcgagattgggggataatgaatcaattgaa 552
             ||||  |  ||||||  |||||  ||| |||| |||||   ||||| ||||||||| |||
Sbjct: 17543 atacatttgttccaactctcaaccctcttttctagattcatggatattgaatcaatcgaa 17602

                                                         
Query: 553   cgcgcttcaaagatttgntccacttttggaagaccttgcgttat 596
             ||| |||| ||||  || || |||||||||||||| || |||||
Sbjct: 17603 cgcacttctaagacctgttctacttttggaagaccctgtgttat 17646

---

>gb|DQ069544.1| Ranunculus macranthus RNA polymerase beta'' chain (rpoC2) gene,
            partial cds; chloroplast
          Length = 4128

 Score =  339 bits (171), Expect = 6e-90
 Identities = 362/429 (84%)
 Strand = Plus / Minus

                                                                        
Query: 79   tctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaaactcga 138
            |||||||  ||||||||||||||||| |||||||||   || |||||||||||||||| |
Sbjct: 3932 tctttcagtcctttcaaccaatcaatacgacctcgtaaagcggcttttgctaaaactcta 3873

                                                                        
Query: 139  gcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagggaagcccttgtt 198
            ||||||||||||||||| |||||||||||||||||||| |||||||| || ||||| |||
Sbjct: 3872 gcagtttcttgaaaactcgcttcagatatgaaactttgagtattcagagatgccctcgtt 3813

                                                                        
Query: 199  attcccaataagattgcccgataatagatcgattcatccaaagctcgccctgctcgttcc 258
            ||||| ||||| |  || || ||| |||||| ||| |||||||| ||||| | |||||||
Sbjct: 3812 attcctaataaaacggctcggtaacagatcgcttcttccaaagcgcgccccgttcgttcc 3753

                                                                        
Query: 259  gctcgcaatagtccgattaattccccaggcnnnnnnncattagacattccatcttcggaa 318
            || | ||| | ||| |||||||| || ||        ||||||||||||||||||| |||
Sbjct: 3752 gccctcaacaatccaattaattcaccgggtgaaaaaacattagacattccatcttctgaa 3693

                                                                        
Query: 319  acccgcacttttgatgttacttggcgtataataatctctatatgtctattatggatctgt 378
            |||  |||||||||||||| ||| |||| |||||| |||||||| |||||||| ||||| 
Sbjct: 3692 accaacacttttgatgttatttgacgtacaataatttctatatgcctattatgtatctgc 3633

                                                                        
Query: 379  accccttgggatcgataaacctttnggattttattaaccaaagaaatacgactttgggct 438
            || || || || |||||||||||| | || |||||||||||||| ||||||||||| |||
Sbjct: 3632 acgccctgcgagcgataaaccttttgaatcttattaaccaaagatatacgactttgtgct 3573

                                                                        
Query: 439  atggttagctcagctccaatcaagaatccccaagggaccccaagaattcttggnatacgc 498
            |||||||||||||| |||||||||||||||||||| | ||||||| ||||||  ||||| 
Sbjct: 3572 atggttagctcagcgccaatcaagaatccccaaggaatcccaagagttcttgttatacgt 3513

                     
Query: 499  tcattccaa 507
            || ||||||
Sbjct: 3512 tcgttccaa 3504



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                        
Query: 535  gataatgaatcaattgaacgcgcttcaaagatttgntccacttttggaagaccttgcgtt 594
            |||| ||||||||| |||||  |||| || | ||| || |||||||||||||||||||||
Sbjct: 3476 gatattgaatcaatcgaacgaacttctaacacttgttctacttttggaagaccttgcgtt 3417

              
Query: 595  at 596
            ||
Sbjct: 3416 at 3415

---

>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA
          Length = 155943

 Score =  339 bits (171), Expect = 6e-90
 Identities = 433/524 (82%)
 Strand = Plus / Plus

                                                                         
Query: 73    acgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaa 132
             ||||| ||||||| ||||||||||||||| || ||||| ||  | || ||||||||||||
Sbjct: 17390 acgttctctttcaggcctttcaaccaatcgatacgaccccggagagccgcttttgctaaa 17449

                                                                         
Query: 133   actcgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagggaagcc 192
             ||||||||||||||||||||||| |||||||||||||||||||| ||||| || || || 
Sbjct: 17450 actcgagcagtttcttgaaaactcgcttcagatatgaaactttgagtattgagagatgct 17509

                                                                         
Query: 193   cttgttattcccaataagattgcccgataatagatcgattcatccaaagctcgccctgct 252
             |||||||||||||||||||   | || ||| |||||| ||| |||||||| |||||   |
Sbjct: 17510 cttgttattcccaataagacgactcggtaacagatcgcttcttccaaagcgcgccccatt 17569

                                                                         
Query: 253   cgttccgctcgcaatagtccgattaattccccaggcnnnnnnncattagacattccatct 312
             ||||| |||||||| | ||| || | ||| || ||        |||||||||||||||||
Sbjct: 17570 cgttctgctcgcaacaatccaataagttctccgggtgaaaaaacattagacattccatct 17629

                                                                         
Query: 313   tcggaaacccgcacttttgatgttacttggcgtataataatctctatatgtctattatgg 372
             || ||||||  |||||||||||||| ||| |||| |||||| |||| ||| |||||||| 
Sbjct: 17630 tctgaaaccaacacttttgatgttatttgacgtacaataatttctagatgcctattatga 17689

                                                                         
Query: 373   atctgtaccccttgggatcgataaacctttnggattttattaaccaaagaaatacgactt 432
             ||||| ||||| ||||| |||||||||| | ||||||||||||||||||| || || |||
Sbjct: 17690 atctgcaccccctgggagcgataaacctgttggattttattaaccaaagagattcggctt 17749

                                                                         
Query: 433   tgggctatggttagctcagctccaatcaagaatccccaagggaccccaagaattcttggn 492
             || ||||| ||||||||||| |||||||||||||||||||| |  |||||||||||||  
Sbjct: 17750 tgcgctatagttagctcagcaccaatcaagaatccccaaggaattccaagaattcttgtt 17809

                                                                         
Query: 493   atacgctcattccaatcctcaattctcctttcgagattgggggataatgaatcaattgaa 552
             ||||  |  |||||| ||||||| ||| |||| |||||   ||||| ||||||||  |||
Sbjct: 17810 atacatttgttccaaccctcaatcctcttttctagattcatggatattgaatcaaccgaa 17869

                                                         
Query: 553   cgcgcttcaaagatttgntccacttttggaagaccttgcgttat 596
             ||| |||| || |  || || ||||||||||||||||| |||||
Sbjct: 17870 cgcacttctaacacctgttctacttttggaagaccttgtgttat 17913

---

>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence
          Length = 155941

 Score =  339 bits (171), Expect = 6e-90
 Identities = 433/524 (82%)
 Strand = Plus / Plus

                                                                         
Query: 73    acgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaa 132
             ||||| ||||||| ||||||||||||||| || ||||| ||  | || ||||||||||||
Sbjct: 17388 acgttctctttcaggcctttcaaccaatcgatacgaccccggagagccgcttttgctaaa 17447

                                                                         
Query: 133   actcgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagggaagcc 192
             ||||||||||||||||||||||| |||||||||||||||||||| ||||| || || || 
Sbjct: 17448 actcgagcagtttcttgaaaactcgcttcagatatgaaactttgagtattgagagatgct 17507

                                                                         
Query: 193   cttgttattcccaataagattgcccgataatagatcgattcatccaaagctcgccctgct 252
             |||||||||||||||||||   | || ||| |||||| ||| |||||||| |||||   |
Sbjct: 17508 cttgttattcccaataagacgactcggtaacagatcgcttcttccaaagcgcgccccatt 17567

                                                                         
Query: 253   cgttccgctcgcaatagtccgattaattccccaggcnnnnnnncattagacattccatct 312
             ||||| |||||||| | ||| || | ||| || ||        |||||||||||||||||
Sbjct: 17568 cgttctgctcgcaacaatccaataagttctccgggtgaaaaaacattagacattccatct 17627

                                                                         
Query: 313   tcggaaacccgcacttttgatgttacttggcgtataataatctctatatgtctattatgg 372
             || ||||||  |||||||||||||| ||| |||| |||||| |||| ||| |||||||| 
Sbjct: 17628 tctgaaaccaacacttttgatgttatttgacgtacaataatttctagatgcctattatga 17687

                                                                         
Query: 373   atctgtaccccttgggatcgataaacctttnggattttattaaccaaagaaatacgactt 432
             ||||| ||||| ||||| |||||||||| | ||||||||||||||||||| || || |||
Sbjct: 17688 atctgcaccccctgggagcgataaacctgttggattttattaaccaaagagattcggctt 17747

                                                                         
Query: 433   tgggctatggttagctcagctccaatcaagaatccccaagggaccccaagaattcttggn 492
             || ||||| ||||||||||| |||||||||||||||||||| |  |||||||||||||  
Sbjct: 17748 tgcgctatagttagctcagcaccaatcaagaatccccaaggaattccaagaattcttgtt 17807

                                                                         
Query: 493   atacgctcattccaatcctcaattctcctttcgagattgggggataatgaatcaattgaa 552
             ||||  |  |||||| ||||||| ||| |||| |||||   ||||| ||||||||  |||
Sbjct: 17808 atacatttgttccaaccctcaatcctcttttctagattcatggatattgaatcaaccgaa 17867

                                                         
Query: 553   cgcgcttcaaagatttgntccacttttggaagaccttgcgttat 596
             ||| |||| || |  || || ||||||||||||||||| |||||
Sbjct: 17868 cgcacttctaacacctgttctacttttggaagaccttgtgttat 17911

---

>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete
             sequence
          Length = 163935

 Score =  331 bits (167), Expect = 2e-87
 Identities = 432/524 (82%)
 Strand = Plus / Minus

                                                                         
Query: 73    acgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaa 132
             ||||| ||||| | |||||||||||||||||| ||||| ||  | || ||||| ||||||
Sbjct: 49487 acgttctcttttaggcctttcaaccaatcaatacgaccccggagagccgctttagctaaa 49428

                                                                         
Query: 133   actcgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagggaagcc 192
             ||||||||||||||||||||||| ||||| |||||||||||||| |||||||  || |  
Sbjct: 49427 actcgagcagtttcttgaaaactcgcttcggatatgaaactttgagtattcaaagatgtt 49368

                                                                         
Query: 193   cttgttattcccaataagattgcccgataatagatcgattcatccaaagctcgccctgct 252
             |||||||||||||||| ||  |||   ||| |||||||||| |||||||| ||||| |  
Sbjct: 49367 cttgttattcccaataggaaggccttgtaacagatcgattcttccaaagcgcgccccgtc 49308

                                                                         
Query: 253   cgttccgctcgcaatagtccgattaattccccaggcnnnnnnncattagacattccatct 312
             |||||||||||||| | ||| |||| ||| | |||        |||||||||||||||| 
Sbjct: 49307 cgttccgctcgcaacaatccaattagttctctaggtaaaaaaacattagacattccatcc 49248

                                                                         
Query: 313   tcggaaacccgcacttttgatgttacttggcgtataataatctctatatgtctattatgg 372
             || ||||||  |||||| ||||||| |||||||| |||||| || || || |||||||||
Sbjct: 49247 tctgaaaccaacactttggatgttatttggcgtacaataatttcgatgtgcctattatgg 49188

                                                                         
Query: 373   atctgtaccccttgggatcgataaacctttnggattttattaaccaaagaaatacgactt 432
             || || ||||| |||||||||||||||||| |||| |||||||||||||| || ||||||
Sbjct: 49187 atttggaccccctgggatcgataaaccttttggatcttattaaccaaagagatccgactt 49128

                                                                         
Query: 433   tgggctatggttagctcagctccaatcaagaatccccaagggaccccaagaattcttggn 492
             ||  |||| ||||||||||| |||||||||||||||||||| |  |||||||||||||  
Sbjct: 49127 tgcactatagttagctcagccccaatcaagaatccccaaggaaatccaagaattcttgtt 49068

                                                                         
Query: 493   atacgctcattccaatcctcaattctcctttcgagattgggggataatgaatcaattgaa 552
             ||| |||| ||||||| ||||| |||  |||| || ||    |||| |||||||| ||||
Sbjct: 49067 atatgctcgttccaattctcaactcttttttctaggttcaccgatattgaatcaactgaa 49008

                                                         
Query: 553   cgcgcttcaaagatttgntccacttttggaagaccttgcgttat 596
             ||| |||| || |  || ||||||||||||||||| ||||||||
Sbjct: 49007 cgcacttctaacacctgttccacttttggaagaccctgcgttat 48964

---

>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome
          Length = 152772

 Score =  327 bits (165), Expect = 2e-86
 Identities = 436/530 (82%)
 Strand = Plus / Minus

                                                                         
Query: 67    agaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagctttt 126
             ||||| ||||||||||||| ||||||||||||||| || || ||  |  | || ||||||
Sbjct: 23075 agaacaacgttttctttcaggcctttcaaccaatcgatacggcccaggagagctgctttt 23016

                                                                         
Query: 127   gctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagg 186
             |||||||||| |||||||||||||||||| ||||| |||||||||||||| |||||||  
Sbjct: 23015 gctaaaactctagcagtttcttgaaaactagcttcggatatgaaactttgagtattcata 22956

                                                                         
Query: 187   gaagcccttgttattcccaataagattgcccgataatagatcgattcatccaaagctcgc 246
             || || |||||||||||||||||||  ||  | ||| |||||| ||| |||||||| || 
Sbjct: 22955 gatgctcttgttattcccaataagacggcttggtaacagatcgcttcttccaaagcgcgt 22896

                                                                         
Query: 247   cctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncattagacatt 306
             ||   ||||||||||||||| | ||| |||| ||| || |||       |||||||||||
Sbjct: 22895 cccattcgttccgctcgcaacaatccaattagttctccgggcgaaaaaacattagacatt 22836

                                                                         
Query: 307   ccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctatatgtcta 366
              ||||||| ||||||   ||||||||||||| ||| |||| |||||| |||||||| |||
Sbjct: 22835 tcatcttctgaaaccaaaacttttgatgttatttgacgtacaataatttctatatgccta 22776

                                                                         
Query: 367   ttatggatctgtaccccttgggatcgataaacctttnggattttattaaccaaagaaata 426
             ||||| ||||| ||||| ||||| |||||||||||| |||  |||||||||||||| |||
Sbjct: 22775 ttatgtatctgcaccccctgggagcgataaaccttttggaccttattaaccaaagagata 22716

                                                                         
Query: 427   cgactttgggctatggttagctcagctccaatcaagaatccccaagggaccccaagaatt 486
             ||||||||  |||| ||||| ||||| |||||||||||| ||||||| |  |||||||||
Sbjct: 22715 cgactttgcactatagttagttcagcaccaatcaagaatgcccaaggaattccaagaatt 22656

                                                                         
Query: 487   cttggnatacgctcattccaatcctcaattctcctttcgagattgggggataatgaatca 546
             ||||  |||   |  |||||| ||||||| ||| ||||||||||    |||| |||||||
Sbjct: 22655 cttgttatagatttgttccaaccctcaatcctcttttcgagattcatcgatattgaatca 22596

                                                               
Query: 547   attgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttat 596
             || |||||| |||| || |  || ||||||||||||||||||||||||||
Sbjct: 22595 atcgaacgcacttctaacacctgttccacttttggaagaccttgcgttat 22546

---

>gb|AY865171.1| Lactuca sativa chloroplast inversion region
          Length = 28722

 Score =  327 bits (165), Expect = 2e-86
 Identities = 436/530 (82%)
 Strand = Plus / Minus

                                                                         
Query: 67    agaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagctttt 126
             ||||| ||||||||||||| ||||||||||||||| || || ||  |  | || ||||||
Sbjct: 17015 agaacaacgttttctttcaggcctttcaaccaatcgatacggcccaggagagctgctttt 16956

                                                                         
Query: 127   gctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagg 186
             |||||||||| |||||||||||||||||| ||||| |||||||||||||| |||||||  
Sbjct: 16955 gctaaaactctagcagtttcttgaaaactagcttcggatatgaaactttgagtattcata 16896

                                                                         
Query: 187   gaagcccttgttattcccaataagattgcccgataatagatcgattcatccaaagctcgc 246
             || || |||||||||||||||||||  ||  | ||| |||||| ||| |||||||| || 
Sbjct: 16895 gatgctcttgttattcccaataagacggcttggtaacagatcgcttcttccaaagcgcgt 16836

                                                                         
Query: 247   cctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncattagacatt 306
             ||   ||||||||||||||| | ||| |||| ||| || |||       |||||||||||
Sbjct: 16835 cccattcgttccgctcgcaacaatccaattagttctccgggcgaaaaaacattagacatt 16776

                                                                         
Query: 307   ccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctatatgtcta 366
              ||||||| ||||||   ||||||||||||| ||| |||| |||||| |||||||| |||
Sbjct: 16775 tcatcttctgaaaccaaaacttttgatgttatttgacgtacaataatttctatatgccta 16716

                                                                         
Query: 367   ttatggatctgtaccccttgggatcgataaacctttnggattttattaaccaaagaaata 426
             ||||| ||||| ||||| ||||| |||||||||||| |||  |||||||||||||| |||
Sbjct: 16715 ttatgtatctgcaccccctgggagcgataaaccttttggaccttattaaccaaagagata 16656

                                                                         
Query: 427   cgactttgggctatggttagctcagctccaatcaagaatccccaagggaccccaagaatt 486
             ||||||||  |||| ||||| ||||| |||||||||||| ||||||| |  |||||||||
Sbjct: 16655 cgactttgcactatagttagttcagcaccaatcaagaatgcccaaggaattccaagaatt 16596

                                                                         
Query: 487   cttggnatacgctcattccaatcctcaattctcctttcgagattgggggataatgaatca 546
             ||||  |||   |  |||||| ||||||| ||| ||||||||||    |||| |||||||
Sbjct: 16595 cttgttatagatttgttccaaccctcaatcctcttttcgagattcatcgatattgaatca 16536

                                                               
Query: 547   attgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttat 596
             || |||||| |||| || |  || ||||||||||||||||||||||||||
Sbjct: 16535 atcgaacgcacttctaacacctgttccacttttggaagaccttgcgttat 16486

---

>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7
             gene region
          Length = 47249

 Score =  327 bits (165), Expect = 2e-86
 Identities = 436/530 (82%)
 Strand = Plus / Minus

                                                                         
Query: 67    agaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagctttt 126
             ||||| ||||||||||| || ||||||||||||||||| || |||||  | |||||||||
Sbjct: 11213 agaacaacgttttcttttaatcctttcaaccaatcaatacggcctcggagagcagctttt 11154

                                                                         
Query: 127   gctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagg 186
             ||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||| 
Sbjct: 11153 gctaaaactcgagcagtttcttgaaaacttgcttcggatataaaactttgagtattcaga 11094

                                                                         
Query: 187   gaagcccttgttattcccaataagattgcccgataatagatcgattcatccaaagctcgc 246
             || || || ||||||||||||||||| |  || ||| |||||| ||| |||||||| |||
Sbjct: 11093 gatgctctcgttattcccaataagatcgttcggtaacagatcgcttcttccaaagcgcgc 11034

                                                                         
Query: 247   cctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncattagacatt 306
             || | |||||| ||||| || | ||| || | ||| || |||        ||||||||||
Sbjct: 11033 cccgttcgttctgctcgaaacaatccaatgagttctccgggcaaaaaaatattagacatt 10974

                                                                         
Query: 307   ccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctatatgtcta 366
             ||||| || ||||||   ||||| ||||||| ||| |||| |||||| || ||||| | |
Sbjct: 10973 ccatcctctgaaaccaagactttagatgttatttgccgtacaataatttcgatatgccga 10914

                                                                         
Query: 367   ttatggatctgtaccccttgggatcgataaacctttnggattttattaaccaaagaaata 426
             | ||| ||||| ||||| |||||||||||||||||| |||| |||||||||||||| |||
Sbjct: 10913 tcatgaatctgcaccccctgggatcgataaaccttttggatcttattaaccaaagagata 10854

                                                                         
Query: 427   cgactttgggctatggttagctcagctccaatcaagaatccccaagggaccccaagaatt 486
             |||||||| ||||| ||||||||||| |||| |||||||||||| || |  |||||||||
Sbjct: 10853 cgactttgcgctatagttagctcagccccaaccaagaatccccacggaattccaagaatt 10794

                                                                         
Query: 487   cttggnatacgctcattccaatcctcaattctcctttcgagattgggggataatgaatca 546
              ||   ||||| || |||||| | | ||| ||| ||||||||||   ||||| ||| |||
Sbjct: 10793 ttttttatacgttcgttccaaccattaatcctcttttcgagattcatggatattgactca 10734

                                                               
Query: 547   attgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttat 596
             |  |||||  |||| |||| ||| ||||||||||| ||||||||||||||
Sbjct: 10733 accgaacgaacttctaagacttgttccacttttggcagaccttgcgttat 10684

---

>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome
          Length = 152765

 Score =  327 bits (165), Expect = 2e-86
 Identities = 436/530 (82%)
 Strand = Plus / Minus

                                                                         
Query: 67    agaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagctttt 126
             ||||| ||||||||||||| ||||||||||||||| || || ||  |  | || ||||||
Sbjct: 23075 agaacaacgttttctttcaggcctttcaaccaatcgatacggcccaggagagctgctttt 23016

                                                                         
Query: 127   gctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagg 186
             |||||||||| |||||||||||||||||| ||||| |||||||||||||| |||||||  
Sbjct: 23015 gctaaaactctagcagtttcttgaaaactagcttcggatatgaaactttgagtattcata 22956

                                                                         
Query: 187   gaagcccttgttattcccaataagattgcccgataatagatcgattcatccaaagctcgc 246
             || || |||||||||||||||||||  ||  | ||| |||||| ||| |||||||| || 
Sbjct: 22955 gatgctcttgttattcccaataagacggcttggtaacagatcgcttcttccaaagcgcgt 22896

                                                                         
Query: 247   cctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncattagacatt 306
             ||   ||||||||||||||| | ||| |||| ||| || |||       |||||||||||
Sbjct: 22895 cccattcgttccgctcgcaacaatccaattagttctccgggcgaaaaaacattagacatt 22836

                                                                         
Query: 307   ccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctatatgtcta 366
              ||||||| ||||||   ||||||||||||| ||| |||| |||||| |||||||| |||
Sbjct: 22835 tcatcttctgaaaccaaaacttttgatgttatttgacgtacaataatttctatatgccta 22776

                                                                         
Query: 367   ttatggatctgtaccccttgggatcgataaacctttnggattttattaaccaaagaaata 426
             ||||| ||||| ||||| ||||| |||||||||||| |||  |||||||||||||| |||
Sbjct: 22775 ttatgtatctgcaccccctgggagcgataaaccttttggaccttattaaccaaagagata 22716

                                                                         
Query: 427   cgactttgggctatggttagctcagctccaatcaagaatccccaagggaccccaagaatt 486
             ||||||||  |||| ||||| ||||| |||||||||||| ||||||| |  |||||||||
Sbjct: 22715 cgactttgcactatagttagttcagcaccaatcaagaatgcccaaggaattccaagaatt 22656

                                                                         
Query: 487   cttggnatacgctcattccaatcctcaattctcctttcgagattgggggataatgaatca 546
             ||||  |||   |  |||||| ||||||| ||| ||||||||||    |||| |||||||
Sbjct: 22655 cttgttatagatttgttccaaccctcaatcctcttttcgagattcatcgatattgaatca 22596

                                                               
Query: 547   attgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttat 596
             || |||||| |||| || |  || ||||||||||||||||||||||||||
Sbjct: 22595 atcgaacgcacttctaacacctgttccacttttggaagaccttgcgttat 22546

---

>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome
          Length = 159930

 Score =  325 bits (164), Expect = 1e-85
 Identities = 335/395 (84%)
 Strand = Plus / Plus

                                                                         
Query: 79    tctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaaactcga 138
             |||||||  ||||||||||||||||| ||||| ||  | || ||||||||||||||||||
Sbjct: 18752 tctttcagacctttcaaccaatcaatacgaccccggagagcggcttttgctaaaactcga 18811

                                                                         
Query: 139   gcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagggaagcccttgtt 198
             || ||||| |||||||| ||||| |||||||||||||| |||||||| || || || |||
Sbjct: 18812 gcggtttcctgaaaactagcttctgatatgaaactttgagtattcagagatgctctcgtt 18871

                                                                         
Query: 199   attcccaataagattgcccgataatagatcgattcatccaaagctcgccctgctcgttcc 258
             |||||||||||||  || || ||| | || |  || |||||||| || ||||||||||| 
Sbjct: 18872 attcccaataagacggctcggtaacaaatagcctcttccaaagcacgacctgctcgttct 18931

                                                                         
Query: 259   gctcgcaatagtccgattaattccccaggcnnnnnnncattagacattccatcttcggaa 318
             |||||||| | |||||||| |||||| ||        ||||||||||||||||||| |||
Sbjct: 18932 gctcgcaacaatccgattagttccccgggtgaaaaaacattagacattccatcttctgaa 18991

                                                                         
Query: 319   acccgcacttttgatgttacttggcgtataataatctctatatgtctattatggatctgt 378
             |||  |||||||||||||| ||| |||| |||||||||||||||  ||||||| ||||||
Sbjct: 18992 accaacacttttgatgttatttgtcgtacaataatctctatatgcttattatgaatctgt 19051

                                                                         
Query: 379   accccttgggatcgataaacctttnggattttattaaccaaagaaatacgactttgggct 438
             ||||| |||||||||||||||||| |||| |||||||||||||||| ||||||||| |||
Sbjct: 19052 accccctgggatcgataaaccttttggatcttattaaccaaagaaacacgactttgcgct 19111

                                                
Query: 439   atggttagctcagctccaatcaagaatccccaagg 473
             ||||| || ||||| ||||||| ||||||||||||
Sbjct: 19112 atggtgagttcagcaccaatcaggaatccccaagg 19146

---

>gb|AC146587.20| Medicago truncatula clone mth2-144j8, complete sequence
          Length = 113373

 Score =  323 bits (163), Expect = 4e-85
 Identities = 419/508 (82%)
 Strand = Plus / Minus

                                                                         
Query: 89    ctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaaactcgagcagtttctt 148
             |||||||||||||||| ||||| ||  | || |||||||||||||||| |||||||||||
Sbjct: 23975 ctttcaaccaatcaatacgaccccgaagagcggcttttgctaaaactctagcagtttctt 23916

                                                                         
Query: 149   gaaaacttgcttcagatatgaaactttgggtattcagggaagcccttgttattcccaata 208
             ||||||| ||||| |||||||||||||| |||||||| || |   |||||||||||||||
Sbjct: 23915 gaaaactcgcttcggatatgaaactttgagtattcagagatgtttttgttattcccaata 23856

                                                                         
Query: 209   agattgcccgataatagatcgattcatccaaagctcgccctgctcgttccgctcgcaata 268
             | |  || || ||| | || | ||| ||||| || ||||| | |||||| ||||||||||
Sbjct: 23855 ataaagctcggtaacaaattgcttcttccaaggcacgcccagttcgttctgctcgcaata 23796

                                                                         
Query: 269   gtccgattaattccccaggcnnnnnnncattagacattccatcttcggaaacccgcactt 328
              ||| |||||||| |||||        ||||| ||||||||||||| || |||   ||||
Sbjct: 23795 atccaattaattcaccaggtaaaaatacattaaacattccatcttctgagaccaagactt 23736

                                                                         
Query: 329   ttgatgttacttggcgtataataatctctatatgtctattatggatctgtaccccttggg 388
             | ||||| | ||| || | |||||| || ||||||||||||||||| ||||| || ||||
Sbjct: 23735 tggatgtcatttgacgcacaataatttcgatatgtctattatggatgtgtactccctggg 23676

                                                                         
Query: 389   atcgataaacctttnggattttattaaccaaagaaatacgactttgggctatggttagct 448
             |||||||||||||| ||||||||||||||||||||||||||||||| || || |||||||
Sbjct: 23675 atcgataaaccttttggattttattaaccaaagaaatacgactttgcgcgatagttagct 23616

                                                                         
Query: 449   cagctccaatcaagaatccccaagggaccccaagaattcttggnatacgctcattccaat 508
             |||| |||||||||||||||||||| |  || ||||||||||  |||| |||||||||| 
Sbjct: 23615 cagcaccaatcaagaatccccaaggaatgccgagaattcttgttatacactcattccaag 23556

                                                                         
Query: 509   cctcaattctcctttcgagattgggggataatgaatcaattgaacgcgcttcaaagattt 568
             | || ||||   ||||||||||    |||| ||||||||| |||||   ||| || ||||
Sbjct: 23555 catcgattcctttttcgagattcatcgatattgaatcaatcgaacgtatttctaatattt 23496

                                         
Query: 569   gntccacttttggaagaccttgcgttat 596
             | |||||||||||||||||||| |||||
Sbjct: 23495 gttccacttttggaagaccttgtgttat 23468

---

>emb|X03912.1|CHPSATPA Pea chloroplast DNA (4.7 kb) 5' to ATP-synthase a subunit gene
          Length = 4680

 Score =  309 bits (156), Expect = 6e-81
 Identities = 418/509 (82%)
 Strand = Plus / Minus

                                                                        
Query: 88   cctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaaactcgagcagtttct 147
            ||||||||||||||||| ||||| ||  | || |||||||||||||||| ||||||||||
Sbjct: 3300 cctttcaaccaatcaatacgaccccgaagagcggcttttgctaaaactctagcagtttct 3241

                                                                        
Query: 148  tgaaaacttgcttcagatatgaaactttgggtattcagggaagcccttgttattcccaat 207
            |||||||| ||||| |||||||||||||| |||||||| || |   |||||| |||||||
Sbjct: 3240 tgaaaactcgcttcggatatgaaactttgagtattcagagatgtttttgttactcccaat 3181

                                                                        
Query: 208  aagattgcccgataatagatcgattcatccaaagctcgccctgctcgttccgctcgcaat 267
            || |  || |  ||| | || | ||| ||||| || ||||| | |||||| |||||||||
Sbjct: 3180 aataaagctctgtaacaaattgcttcttccaaggcacgccccgttcgttctgctcgcaat 3121

                                                                        
Query: 268  agtccgattaattccccaggcnnnnnnncattagacattccatcttcggaaacccgcact 327
            | ||| |||| ||| |||||         |||||||||||||||||| ||||||   |||
Sbjct: 3120 aatccaattagttcgccaggtaaaaatatattagacattccatcttctgaaaccaagact 3061

                                                                        
Query: 328  tttgatgttacttggcgtataataatctctatatgtctattatggatctgtaccccttgg 387
            || ||||||| ||| || | ||||||||| ||||||||||||||||| ||||| || |||
Sbjct: 3060 ttggatgttatttgacgcacaataatctcgatatgtctattatggatgtgtactccctgg 3001

                                                                        
Query: 388  gatcgataaacctttnggattttattaaccaaagaaatacgactttgggctatggttagc 447
            ||||||||||||||| ||||||||||||||||||||||||||||||| || || ||||||
Sbjct: 3000 gatcgataaaccttttggattttattaaccaaagaaatacgactttgcgcgatagttagc 2941

                                                                        
Query: 448  tcagctccaatcaagaatccccaagggaccccaagaattcttggnatacgctcattccaa 507
            ||||| |||||||||||||||||||| |  || | |||| |||  |||| ||| ||||||
Sbjct: 2940 tcagcaccaatcaagaatccccaaggaatgccgataatttttgttatacactcgttccaa 2881

                                                                        
Query: 508  tcctcaattctcctttcgagattgggggataatgaatcaattgaacgcgcttcaaagatt 567
             | ||||||||  |||| |||||   ||||| ||||||||| |||||   ||| || || 
Sbjct: 2880 gcatcaattcttttttctagattcatggatattgaatcaatcgaacgtatttctaatatc 2821

                                         
Query: 568  tgntccacttttggaagaccttgcgttat 596
            || |||||||||||||||||||| |||||
Sbjct: 2820 tgttccacttttggaagaccttgtgttat 2792

---

>gb|AC145457.1| Cicer arietinum strain FLIP84-92C clone gl1-40c9, complete sequence
          Length = 23359

 Score =  309 bits (156), Expect = 6e-81
 Identities = 418/509 (82%)
 Strand = Plus / Plus

                                                                        
Query: 88   cctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaaactcgagcagtttct 147
            ||||||||||||||||| ||||| ||  | || |||||||||||||||| ||||||||||
Sbjct: 618  cctttcaaccaatcaatacgaccccgaagagcggcttttgctaaaactctagcagtttct 677

                                                                        
Query: 148  tgaaaacttgcttcagatatgaaactttgggtattcagggaagcccttgttattcccaat 207
            |||||||| ||||| |||||||||||||| ||||| || || |   ||||||||||||||
Sbjct: 678  tgaaaactcgcttcggatatgaaactttgagtatttagagatgtttttgttattcccaat 737

                                                                        
Query: 208  aagattgcccgataatagatcgattcatccaaagctcgccctgctcgttccgctcgcaat 267
            || |  || || ||| | || | ||| ||||| || ||||| | |||||| |||||||||
Sbjct: 738  aataaagctcggtaacaaattgcttcttccaatgcacgccccgttcgttctgctcgcaat 797

                                                                        
Query: 268  agtccgattaattccccaggcnnnnnnncattagacattccatcttcggaaacccgcact 327
            | ||| || | |||||| ||        ||||||||||||||||||| ||||||   |||
Sbjct: 798  aatccaatgagttccccgggtaaaaatacattagacattccatcttccgaaaccaatact 857

                                                                        
Query: 328  tttgatgttacttggcgtataataatctctatatgtctattatggatctgtaccccttgg 387
            || ||||||| ||| || | |||||| || ||||||||||||||||| ||||| || |||
Sbjct: 858  ttggatgttatttgacgcacaataatttcgatatgtctattatggatgtgtactccctgg 917

                                                                        
Query: 388  gatcgataaacctttnggattttattaaccaaagaaatacgactttgggctatggttagc 447
            ||||||||||||||| | |||||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 918  gatcgataaaccttttgtattttattaaccaaagaaatgcgactttgcgctatagttagc 977

                                                                        
Query: 448  tcagctccaatcaagaatccccaagggaccccaagaattcttggnatacgctcattccaa 507
            ||||| |||||||||||||||||||| |  || ||||||||||| |||| ||| ||||||
Sbjct: 978  tcagcaccaatcaagaatccccaaggaataccgagaattcttggtatacactcgttccaa 1037

                                                                        
Query: 508  tcctcaattctcctttcgagattgggggataatgaatcaattgaacgcgcttcaaagatt 567
             | |||||||   |||| |||||    |||| ||||||||| |||||   ||| || || 
Sbjct: 1038 gcatcaattcgtttttctagattcatcgatattgaatcaatcgaacgtatttctaatatc 1097

                                         
Query: 568  tgntccacttttggaagaccttgcgttat 596
            || |||||||||||||||||||| |||||
Sbjct: 1098 tgttccacttttggaagaccttgtgttat 1126

---

>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence,
             strain:Columbia
          Length = 154478

 Score =  303 bits (153), Expect = 4e-79
 Identities = 354/424 (83%)
 Strand = Plus / Plus

                                                                         
Query: 67    agaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagctttt 126
             ||||| || |||||||||| ||||||||||||||| || ||||| ||  | |||||||||
Sbjct: 16131 agaacaacattttctttcaggcctttcaaccaatcgatacgaccccgaagagcagctttt 16190

                                                                         
Query: 127   gctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagg 186
             ||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||  
Sbjct: 16191 gctaaaactcgagcagtttcttgaaaacttgcttcggatataaaactttgagtattcaaa 16250

                                                                         
Query: 187   gaagcccttgttattcccaataagattgcccgataatagatcgattcatccaaagctcgc 246
             || || |  |||||||| ||||| |  || |||||| |||| | ||| || ||||| |||
Sbjct: 16251 gatgctcgagttattcctaataaaacggctcgataacagattgcttcttctaaagcacgc 16310

                                                                         
Query: 247   cctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncattagacatt 306
             || | |||||| ||||| |||| ||| || | ||| |||||        |||||||||||
Sbjct: 16311 cccgttcgttctgctcgtaataatccaataagttctccaggtaaaaaaacattagacatt 16370

                                                                         
Query: 307   ccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctatatgtcta 366
             || ||||||||||||   ||||||||||||| ||| |||| |||||| || ||||| |||
Sbjct: 16371 ccctcttcggaaaccaaaacttttgatgttatttgacgtacaataatttcgatatgccta 16430

                                                                         
Query: 367   ttatggatctgtaccccttgggatcgataaacctttnggattttattaaccaaagaaata 426
             ||||| ||||| ||||| |||||||||||||||||| | || ||||||||||||||||||
Sbjct: 16431 ttatgaatctgcaccccctgggatcgataaaccttttgaatcttattaaccaaagaaata 16490

                                                                         
Query: 427   cgactttgggctatggttagctcagctccaatcaagaatccccaagggaccccaagaatt 486
             ||||||||  |||| |||| |||||| |||||||||||||||||||| |  |||||||||
Sbjct: 16491 cgactttgcactatagttaactcagcaccaatcaagaatccccaaggaattccaagaatt 16550

                 
Query: 487   cttg 490
             ||||
Sbjct: 16551 cttg 16554

---

>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence
          Length = 153482

 Score =  287 bits (145), Expect = 2e-74
 Identities = 352/424 (83%)
 Strand = Plus / Plus

                                                                         
Query: 67    agaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagctttt 126
             ||||| || |||||||||| ||||||||||||||| || ||||| ||  | |||||||||
Sbjct: 15765 agaacaacattttctttcaggcctttcaaccaatcgatacgaccccgaagagcagctttt 15824

                                                                         
Query: 127   gctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagg 186
             |||||||||| |||||||||||||||||||||||| ||||| |||||||| |||||||  
Sbjct: 15825 gctaaaactctagcagtttcttgaaaacttgcttcggatataaaactttgagtattcaaa 15884

                                                                         
Query: 187   gaagcccttgttattcccaataagattgcccgataatagatcgattcatccaaagctcgc 246
             || || |  |||||||| ||||| |  || |||||| |||| | ||| || ||||| |||
Sbjct: 15885 gatgctcgagttattcctaataaaacggctcgataacagattgcttcttctaaagcacgc 15944

                                                                         
Query: 247   cctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncattagacatt 306
             || |  ||||| ||||| || | ||| || ||||| |||||        |||||||||||
Sbjct: 15945 cccgtgcgttctgctcgtaacaatccaatcaattctccaggtaaaaaaacattagacatt 16004

                                                                         
Query: 307   ccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctatatgtcta 366
             || ||||| ||||||   ||||||||||||| ||| |||| |||||| || ||||| |||
Sbjct: 16005 ccctcttctgaaaccaaaacttttgatgttatttgacgtacaataatttcgatatgccta 16064

                                                                         
Query: 367   ttatggatctgtaccccttgggatcgataaacctttnggattttattaaccaaagaaata 426
             ||||| ||||| ||||| |||||||||||||||||| | || ||||||||||||||||||
Sbjct: 16065 ttatgaatctgcaccccctgggatcgataaaccttttgaatcttattaaccaaagaaata 16124

                                                                         
Query: 427   cgactttgggctatggttagctcagctccaatcaagaatccccaagggaccccaagaatt 486
             ||||||||  |||| ||||||||||| |||||||||||||||||||| |  |||||||||
Sbjct: 16125 cgactttgcactatagttagctcagcaccaatcaagaatccccaaggaattccaagaatt 16184

                 
Query: 487   cttg 490
             ||||
Sbjct: 16185 cttg 16188

---

>emb|AJ243754.2|SAL243754 Sinapis alba chloroplast rpoB operon (rpoB, rpoC1 and rpoC2 genes)
          Length = 11206

 Score =  280 bits (141), Expect = 5e-72
 Identities = 351/424 (82%)
 Strand = Plus / Minus

                                                                         
Query: 67    agaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagctttt 126
             ||||| || |||||||||| ||||||||||||||| || ||||| ||  | |||||||||
Sbjct: 10844 agaacaacattttctttcaggcctttcaaccaatcgatacgaccccgaagagcagctttt 10785

                                                                         
Query: 127   gctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagg 186
             ||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||  
Sbjct: 10784 gctaaaactcgagcagtttcttgaaaacttgcttcggatataaaactttgagtattcaaa 10725

                                                                         
Query: 187   gaagcccttgttattcccaataagattgcccgataatagatcgattcatccaaagctcgc 246
             || || |  |||||||| ||||| |  || |||||| |||| | ||| || ||||| |||
Sbjct: 10724 gatgctcgagttattcctaataaaacggctcgataacagattgcttcttctaaagcacgc 10665

                                                                         
Query: 247   cctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncattagacatt 306
             || |  ||||| ||||| || | ||| || ||||| |||||        |||||||||||
Sbjct: 10664 cccgtgcgttctgctcgtaacaatccaatcaattctccaggtaaaaaaacattagacatt 10605

                                                                         
Query: 307   ccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctatatgtcta 366
             || ||||| ||||||   ||||||||||||| ||| |||| |||||| || ||||| |||
Sbjct: 10604 ccctcttctgaaaccaaaacttttgatgttatttgacgtacaataatttcgatatgccta 10545

                                                                         
Query: 367   ttatggatctgtaccccttgggatcgataaacctttnggattttattaaccaaagaaata 426
             ||||| ||||| ||||| ||||||| |||||||| |  ||| ||||||||||||||||||
Sbjct: 10544 ttatgaatctgcaccccctgggatctataaacctgtttgatcttattaaccaaagaaata 10485

                                                                         
Query: 427   cgactttgggctatggttagctcagctccaatcaagaatccccaagggaccccaagaatt 486
             ||||||||  |||| ||||||||||| |||||||||||||||||||| |  |||||||||
Sbjct: 10484 cgactttgcactatagttagctcagcaccaatcaagaatccccaaggaattccaagaatt 10425

                 
Query: 487   cttg 490
             ||||
Sbjct: 10424 cttg 10421

---

>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome
          Length = 150519

 Score =  272 bits (137), Expect = 1e-69
 Identities = 423/522 (81%)
 Strand = Plus / Minus

                                                                         
Query: 75    gttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaaac 134
             ||||||||| |  |||||||||||||| || ||||||||  | || ||||||||||||||
Sbjct: 44506 gttttcttttagacctttcaaccaatcgatacgacctcggagagcggcttttgctaaaac 44447

                                                                         
Query: 135   tcgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagggaagccct 194
             || |||||||||||||||||||||||| |||||||||||||| |||||||| || |   |
Sbjct: 44446 tctagcagtttcttgaaaacttgcttcggatatgaaactttgagtattcagagatgtttt 44387

                                                                         
Query: 195   tgttattcccaataagattgcccgataatagatcgattcatccaaagctcgccctgctcg 254
             ||||||||||||||| |  |  || ||| | || ||||| ||||| || ||||||| |||
Sbjct: 44386 tgttattcccaataatagagttcggtaacaaatagattcttccaaggcgcgccctgttcg 44327

                                                                         
Query: 255   ttccgctcgcaatagtccgattaattccccaggcnnnnnnncattagacattccatcttc 314
             ||  ||||| || | ||| |||| |||||| ||        |||| ||||||||||||||
Sbjct: 44326 ttgagctcgtaacaatccaattagttcccccggtgaaaatacattcgacattccatcttc 44267

                                                                         
Query: 315   ggaaacccgcacttttgatgttacttggcgtataataatctctatatgtctattatggat 374
              || |||   ||||||||||||| ||| || | |||||| || |||||||||||||||||
Sbjct: 44266 tgacaccaagacttttgatgttatttgacgaacaataatttcgatatgtctattatggat 44207

                                                                         
Query: 375   ctgtaccccttgggatcgataaacctttnggattttattaaccaaagaaatacgactttg 434
              || || || ||||||||||||||  || |||||||||| ||||||||||||||||||||
Sbjct: 44206 gtgcactccctgggatcgataaactctttggattttattcaccaaagaaatacgactttg 44147

                                                                         
Query: 435   ggctatggttagctcagctccaatcaagaatccccaagggaccccaagaattcttggnat 494
              ||||| ||||||||||| ||||||||||||| |||||| |  || ||||||| ||  ||
Sbjct: 44146 agctatagttagctcagcaccaatcaagaatctccaaggaatgcccagaattcctgttat 44087

                                                                         
Query: 495   acgctcattccaatcctcaattctcctttcgagattgggggataatgaatcaattgaacg 554
             ||| || |||||| | ||||||||| |||| || ||    |||| ||||||||| |||||
Sbjct: 44086 acgttcgttccaagcatcaattctcttttctaggttcattgatattgaatcaatcgaacg 44027

                                                       
Query: 555   cgcttcaaagatttgntccacttttggaagaccttgcgttat 596
               |||| || |  || || ||||||||||||||||| |||||
Sbjct: 44026 tacttctaatacctgttctacttttggaagaccttgtgttat 43985

---

>gb|AF289093.1| Glycine max chloroplast rpoBC gene cluster, complete sequence
          Length = 12968

 Score =  228 bits (115), Expect = 2e-56
 Identities = 291/353 (82%)
 Strand = Plus / Minus

                                                                         
Query: 244   cgccctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncattagac 303
             |||||||||||||| |||||||| | ||| |||| ||| || |||       ||||||||
Sbjct: 11558 cgccctgctcgttcggctcgcaacaatccaattagttcaccgggcaaaaaaacattagac 11499

                                                                         
Query: 304   attccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctatatgt 363
             ||||||||||||||||||   ||||||||||||| ||| || | |||||| |||||||||
Sbjct: 11498 attccatcttcggaaaccaagacttttgatgttatttgacgcacaataatttctatatgt 11439

                                                                         
Query: 364   ctattatggatctgtaccccttgggatcgataaacctttnggattttattaaccaaagaa 423
             |||||||| || || || || |||||||||||||| ||| | ||||||||||||||||||
Sbjct: 11438 ctattatgaatgtgaactccctgggatcgataaactttttgaattttattaaccaaagaa 11379

                                                                         
Query: 424   atacgactttgggctatggttagctcagctccaatcaagaatccccaagggaccccaaga 483
             ||||||||||| ||||| ||||||||||| |||||||||||||||||||| |  ||||||
Sbjct: 11378 atacgactttgcgctatcgttagctcagcaccaatcaagaatccccaaggaatgccaaga 11319

                                                                         
Query: 484   attcttggnatacgctcattccaatcctcaattctcctttcgagattgggggataatgaa 543
             ||| |||  |||||| ||||||||   |||| |||| |||| || ||    |||| ||||
Sbjct: 11318 atttttgttatacgcccattccaagtatcaactctcttttctaggttcatcgatattgaa 11259

                                                                  
Query: 544   tcaattgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttat 596
             ||||| |||||  |||| || |  || || ||||||||||||||||| |||||
Sbjct: 11258 tcaatcgaacgaacttctaatacctgttctacttttggaagaccttgtgttat 11206



 Score =  123 bits (62), Expect = 7e-25
 Identities = 100/113 (88%)
 Strand = Plus / Minus

                                                                         
Query: 73    acgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaa 132
             ||||| |||||||  |||||||||||||| ||||| || ||  | || ||||||| ||||
Sbjct: 11729 acgttctctttcagacctttcaaccaatctatgcgcccccggagagcggcttttgataaa 11670

                                                                  
Query: 133   actcgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcag 185
             |||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 11669 actctagcagtttcttgaaaacttgcttcagatatgaaactttgagtattcag 11617

---

>dbj|AB098212.1| Nicotiana sylvestris rpoC2 gene for RNA polymerase beta'' subunit,
           partial cds
          Length = 336

 Score =  228 bits (115), Expect = 2e-56
 Identities = 274/330 (83%)
 Strand = Plus / Minus

                                                                       
Query: 93  caaccaatcaatgcgacctcgtngggcagcttttgctaaaactcgagcagtttcttgaaa 152
           ||||||||| || ||||| ||  | || ||||||||||||||||||||||||||||||||
Sbjct: 336 caaccaatcgatacgaccccggagagccgcttttgctaaaactcgagcagtttcttgaaa 277

                                                                       
Query: 153 acttgcttcagatatgaaactttgggtattcagggaagcccttgttattcccaataagat 212
           ||| |||||||||||||||||||| ||||| || || || ||||||||||||||||||| 
Sbjct: 276 actcgcttcagatatgaaactttgagtattgagagatgctcttgttattcccaataagac 217

                                                                       
Query: 213 tgcccgataatagatcgattcatccaaagctcgccctgctcgttccgctcgcaatagtcc 272
             | || ||| |||||| ||| |||||||| |||||   |||||| |||||||| | |||
Sbjct: 216 gactcggtaacagatcgcttcttccaaagcgcgccccattcgttctgctcgcaacaatcc 157

                                                                       
Query: 273 gattaattccccaggcnnnnnnncattagacattccatcttcggaaacccgcacttttga 332
            || | ||| || ||        ||||||||||||||||||| ||||||  |||||||||
Sbjct: 156 aataagttctccgggtgaaaaaacattagacattccatcttctgaaaccaacacttttga 97

                                                                       
Query: 333 tgttacttggcgtataataatctctatatgtctattatggatctgtaccccttgggatcg 392
           ||||| ||| |||| |||||| |||| ||| |||||||| ||||| ||||| ||||| ||
Sbjct: 96  tgttatttgacgtacaataatttctagatgcctattatgaatctgcaccccctgggagcg 37

                                         
Query: 393 ataaacctttnggattttattaaccaaaga 422
           |||||||| | |||||||||||||||||||
Sbjct: 36  ataaacctgttggattttattaaccaaaga 7

---

>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome
          Length = 152218

 Score =  228 bits (115), Expect = 2e-56
 Identities = 291/353 (82%)
 Strand = Plus / Minus

                                                                         
Query: 244   cgccctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncattagac 303
             |||||||||||||| |||||||| | ||| |||| ||| || |||       ||||||||
Sbjct: 44350 cgccctgctcgttcggctcgcaacaatccaattagttcaccgggcaaaaaaacattagac 44291

                                                                         
Query: 304   attccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctatatgt 363
             ||||||||||||||||||   ||||||||||||| ||| || | |||||| |||||||||
Sbjct: 44290 attccatcttcggaaaccaagacttttgatgttatttgacgcacaataatttctatatgt 44231

                                                                         
Query: 364   ctattatggatctgtaccccttgggatcgataaacctttnggattttattaaccaaagaa 423
             |||||||| || || || || |||||||||||||| ||| | ||||||||||||||||||
Sbjct: 44230 ctattatgaatgtgaactccctgggatcgataaactttttgaattttattaaccaaagaa 44171

                                                                         
Query: 424   atacgactttgggctatggttagctcagctccaatcaagaatccccaagggaccccaaga 483
             ||||||||||| ||||| ||||||||||| |||||||||||||||||||| |  ||||||
Sbjct: 44170 atacgactttgcgctatcgttagctcagcaccaatcaagaatccccaaggaatgccaaga 44111

                                                                         
Query: 484   attcttggnatacgctcattccaatcctcaattctcctttcgagattgggggataatgaa 543
             ||| |||  |||||| ||||||||   |||| |||| |||| || ||    |||| ||||
Sbjct: 44110 atttttgttatacgcccattccaagtatcaactctcttttctaggttcatcgatattgaa 44051

                                                                  
Query: 544   tcaattgaacgcgcttcaaagatttgntccacttttggaagaccttgcgttat 596
             ||||| |||||  |||| || |  || || ||||||||||||||||| |||||
Sbjct: 44050 tcaatcgaacgaacttctaatacctgttctacttttggaagaccttgtgttat 43998



 Score =  123 bits (62), Expect = 7e-25
 Identities = 100/113 (88%)
 Strand = Plus / Minus

                                                                         
Query: 73    acgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaa 132
             ||||| |||||||  |||||||||||||| ||||| || ||  | || ||||||| ||||
Sbjct: 44521 acgttctctttcagacctttcaaccaatctatgcgcccccggagagcggcttttgataaa 44462

                                                                  
Query: 133   actcgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcag 185
             |||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 44461 actctagcagtttcttgaaaacttgcttcagatatgaaactttgagtattcag 44409

---

>dbj|AB098233.1| Nicotiana tomentosiformis rpoC2 gene for RNA polymerase beta''
           subunit, partial cds
          Length = 329

 Score =  226 bits (114), Expect = 7e-56
 Identities = 253/302 (83%)
 Strand = Plus / Minus

                                                                       
Query: 121 gcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggta 180
           ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 305 gcttttgctaaaactcgagcagtctcttgaaaactcgcttcagatatgaaactttgagta 246

                                                                       
Query: 181 ttcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatccaaa 240
           || || || || |||||||||||||||||||   | || ||| |||||| ||| ||||||
Sbjct: 245 ttgagagatgctcttgttattcccaataagacgactcggtaacagatcgcttcttccaaa 186

                                                                       
Query: 241 gctcgccctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncatta 300
           || |||||   |||||| |||||||| | ||| || | ||| || ||        |||||
Sbjct: 185 gcgcgccccattcgttctgctcgcaacaatccaataagttctccgggtgaaaaaacatta 126

                                                                       
Query: 301 gacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctata 360
           |||||||||||||| ||||||  |||||||||||||| ||| |||| |||||| ||||||
Sbjct: 125 gacattccatcttctgaaaccaacacttttgatgttatttgacgtacaataatttctata 66

                                                                       
Query: 361 tgtctattatggatctgtaccccttgggatcgataaacctttnggattttattaaccaaa 420
           || |||||||| ||||| ||||| ||||| |||||||||| | |||||||||||||||||
Sbjct: 65  tgcctattatgaatctgcaccccctgggagcgataaacctgttggattttattaaccaaa 6

             
Query: 421 ga 422
           ||
Sbjct: 5   ga 4

---

>gb|DQ167399.1| Oryza sativa (indica cultivar-group) isolate 93-11 mitochondrion,
              complete genome
          Length = 491515

 Score =  184 bits (93), Expect = 2e-43
 Identities = 148/166 (89%), Gaps = 3/166 (1%)
 Strand = Plus / Minus

                                                                          
Query: 302    acattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctatat 361
              ||||||||||||| ||||||  |||||||||||||||||| || | ||||||||| ||||
Sbjct: 247184 acattccatcttctgaaaccaacacttttgatgttacttgacgcacaataatctcgatat 247125

                                                                          
Query: 362    gtctattatggatctgtaccccttgggatcgataaacctttngga---ttttattaacca 418
              ||||||||||||||||||| || ||| ||||| |||||||| |||   | || |||||||
Sbjct: 247124 gtctattatggatctgtactccctggtatcgagaaacctttaggatcttcttcttaacca 247065

                                                            
Query: 419    aagaaatacgactttgggctatggttagctcagctccaatcaagaa 464
              |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 247064 aagaaatacgactttgggctatggttagctcagctccaataaagaa 247019

---

>gb|DQ167807.1| Oryza sativa (japonica cultivar-group) isolate PA64S mitochondrion,
              complete genome
          Length = 490673

 Score =  184 bits (93), Expect = 2e-43
 Identities = 148/166 (89%), Gaps = 3/166 (1%)
 Strand = Plus / Minus

                                                                          
Query: 302    acattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctatat 361
              ||||||||||||| ||||||  |||||||||||||||||| || | ||||||||| ||||
Sbjct: 246366 acattccatcttctgaaaccaacacttttgatgttacttgacgcacaataatctcgatat 246307

                                                                          
Query: 362    gtctattatggatctgtaccccttgggatcgataaacctttngga---ttttattaacca 418
              ||||||||||||||||||| || ||| ||||| |||||||| |||   | || |||||||
Sbjct: 246306 gtctattatggatctgtactccctggtatcgagaaacctttaggatcttcttcttaacca 246247

                                                            
Query: 419    aagaaatacgactttgggctatggttagctcagctccaatcaagaa 464
              |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 246246 aagaaatacgactttgggctatggttagctcagctccaataaagaa 246201

---

>gb|DQ167400.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare mitochondrion,
              complete genome
          Length = 490669

 Score =  184 bits (93), Expect = 2e-43
 Identities = 148/166 (89%), Gaps = 3/166 (1%)
 Strand = Plus / Minus

                                                                          
Query: 302    acattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctatat 361
              ||||||||||||| ||||||  |||||||||||||||||| || | ||||||||| ||||
Sbjct: 246363 acattccatcttctgaaaccaacacttttgatgttacttgacgcacaataatctcgatat 246304

                                                                          
Query: 362    gtctattatggatctgtaccccttgggatcgataaacctttngga---ttttattaacca 418
              ||||||||||||||||||| || ||| ||||| |||||||| |||   | || |||||||
Sbjct: 246303 gtctattatggatctgtactccctggtatcgagaaacctttaggatcttcttcttaacca 246244

                                                            
Query: 419    aagaaatacgactttgggctatggttagctcagctccaatcaagaa 464
              |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 246243 aagaaatacgactttgggctatggttagctcagctccaataaagaa 246198

---

>dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochondrial DNA, complete genome
          Length = 490520

 Score =  184 bits (93), Expect = 2e-43
 Identities = 148/166 (89%), Gaps = 3/166 (1%)
 Strand = Plus / Minus

                                                                          
Query: 302    acattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctatat 361
              ||||||||||||| ||||||  |||||||||||||||||| || | ||||||||| ||||
Sbjct: 246242 acattccatcttctgaaaccaacacttttgatgttacttgacgcacaataatctcgatat 246183

                                                                          
Query: 362    gtctattatggatctgtaccccttgggatcgataaacctttngga---ttttattaacca 418
              ||||||||||||||||||| || ||| ||||| |||||||| |||   | || |||||||
Sbjct: 246182 gtctattatggatctgtactccctggtatcgagaaacctttaggatcttcttcttaacca 246123

                                                            
Query: 419    aagaaatacgactttgggctatggttagctcagctccaatcaagaa 464
              |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 246122 aagaaatacgactttgggctatggttagctcagctccaataaagaa 246077

---

>dbj|AP004576.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01N11, TM0177,
             complete sequence
          Length = 133589

 Score =  178 bits (90), Expect = 1e-41
 Identities = 256/314 (81%)
 Strand = Plus / Minus

                                                                         
Query: 121   gcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggta 180
             |||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 85547 gcttttgctaaaactctagcagtttcttgaaaacttgcttcggatatgaaactttgagta 85488

                                                                         
Query: 181   ttcagggaagcccttgttattcccaataagattgcccgataatagatcgattcatccaaa 240
             ||||  || |   |||||||||||||||| || |  || ||| | || ||||| ||||| 
Sbjct: 85487 ttcatagatgtttttgttattcccaataatatagttcggtaacaaatagattcttccaag 85428

                                                                         
Query: 241   gctcgccctgctcgttccgctcgcaatagtccgattaattccccaggcnnnnnnncatta 300
             || ||||||| |||||  ||||| || | ||| |||| ||||||  |        |||| 
Sbjct: 85427 gcacgccctgttcgttgagctcgtaacaatccaattagttcccccagtgaaaatacattc 85368

                                                                         
Query: 301   gacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatctctata 360
             |||||||||||||| || |||   ||||||||||||| ||| || | |||||| || |||
Sbjct: 85367 gacattccatcttctgacaccaagacttttgatgttatttgacgaacaataatttcgata 85308

                                                                         
Query: 361   tgtctattatggatctgtaccccttgggatcgataaacctttnggattttattaaccaaa 420
             |||||||||||||| || || || ||||||||||||||  || |||||||||| ||||||
Sbjct: 85307 tgtctattatggatgtgcactccctgggatcgataaactctttggattttattcaccaaa 85248

                           
Query: 421   gaaatacgactttg 434
             ||||||||||||||
Sbjct: 85247 gaaatacgactttg 85234

---

>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence
          Length = 162686

 Score =  174 bits (88), Expect = 2e-40
 Identities = 153/175 (87%)
 Strand = Plus / Plus

                                                                         
Query: 296   cattagacattccatcttcggaaacccgcacttttgatgttacttggcgtataataatct 355
             ||||||||||||||||||| ||||||   ||||||||||||| ||| |||| |||| | |
Sbjct: 20407 cattagacattccatcttctgaaaccaagacttttgatgttatttgtcgtacaatagttt 20466

                                                                         
Query: 356   ctatatgtctattatggatctgtaccccttgggatcgataaacctttnggattttattaa 415
             ||||||| |||||||||||||| ||||| |||||||||||||||||| |||| |||||||
Sbjct: 20467 ctatatgcctattatggatctgcaccccctgggatcgataaaccttttggatcttattaa 20526

                                                                    
Query: 416   ccaaagaaatacgactttgggctatggttagctcagctccaatcaagaatcccca 470
             ||||||| |||||||||||  |||||||||||| ||| | ||| |||||| ||||
Sbjct: 20527 ccaaagagatacgactttgcactatggttagctgagcactaataaagaattccca 20581



 Score =  125 bits (63), Expect = 2e-25
 Identities = 113/130 (86%)
 Strand = Plus / Plus

                                                                         
Query: 79    tctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaaactcga 138
             ||||||| |||||||||||||||||| |||| |||  | || ||||| |||||||| |||
Sbjct: 20190 tctttcaggcctttcaaccaatcaatacgacttcggagagcggctttcgctaaaacccga 20249

                                                                         
Query: 139   gcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagggaagcccttgtt 198
             |  |||||||||||||| ||||| |||||||||||||| |||||||| || ||||| |||
Sbjct: 20250 gtggtttcttgaaaactcgcttctgatatgaaactttgagtattcagagatgccctcgtt 20309

                       
Query: 199   attcccaata 208
             ||||||||||
Sbjct: 20310 attcccaata 20319



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                         
Query: 535   gataatgaatcaattgaacgcgcttcaaagatttgntccacttttggaagaccttgcgtt 594
             |||| ||||||||| |||||  |||| || | ||| || ||||||||||||||||| |||
Sbjct: 20646 gatattgaatcaatcgaacgaacttctaacacttgttcaacttttggaagaccttgagtt 20705

               
Query: 595   at 596
             ||
Sbjct: 20706 at 20707

---

>emb|AJ391748.1|VME391748 Vicia melanops genomic repetitive element, clone M27
          Length = 509

 Score =  145 bits (73), Expect = 2e-31
 Identities = 218/269 (81%)
 Strand = Plus / Minus

                                                                       
Query: 88  cctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaaactcgagcagtttct 147
           ||||||||||||||||| ||||| ||  | || |||||||||||||||| ||||||||||
Sbjct: 271 cctttcaaccaatcaatacgaccccgaagagcggcttttgctaaaactctagcagtttct 212

                                                                       
Query: 148 tgaaaacttgcttcagatatgaaactttgggtattcagggaagcccttgttattcccaat 207
           |||||||| ||||| |||||||||||||| |||||||| || |   ||||||||||||||
Sbjct: 211 tgaaaactcgcttcggatatgaaactttgagtattcagagatgtttttgttattcccaat 152

                                                                       
Query: 208 aagattgcccgataatagatcgattcatccaaagctcgccctgctcgttccgctcgcaat 267
           || |  || || ||| | || | ||| ||||| || ||||| | |||||| |||||||||
Sbjct: 151 aaaaaagctcggtaacaaattggttcttccaaggcacgccccgttcgttctgctcgcaat 92

                                                                       
Query: 268 agtccgattaattccccaggcnnnnnnncattagacattccatcttcggaaacccgcact 327
           | ||| |||| ||| |||||        ||||||||||||||||||| ||||||   |||
Sbjct: 91  aatccaattagttcgccaggtaaaaatacattagacattccatcttctgaaaccaagact 32

                                        
Query: 328 tttgatgttacttggcgtataataatctc 356
           || ||||||| ||| || | |||||||||
Sbjct: 31  ttggatgttatttgacgcacaataatctc 3

---

>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence
          Length = 119707

 Score =  141 bits (71), Expect = 3e-30
 Identities = 118/134 (88%)
 Strand = Plus / Plus

                                                                         
Query: 76    ttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaaact 135
             ||||| |||||||||||||||||||| ||||||||| || | |||||||| ||||| || 
Sbjct: 16390 ttttccttcaagcctttcaaccaatcgatgcgaccttgtagagcagctttagctaagacc 16449

                                                                         
Query: 136   cgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagggaagccctt 195
             |||||||||||||| ||||| ||||| ||||| |||||||| |||||||| || ||||||
Sbjct: 16450 cgagcagtttcttggaaactcgcttcggatataaaactttgagtattcagagatgccctt 16509

                           
Query: 196   gttattcccaataa 209
             |||||||| |||||
Sbjct: 16510 gttattcctaataa 16523

---

>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome
          Length = 116866

 Score =  133 bits (67), Expect = 7e-28
 Identities = 117/134 (87%)
 Strand = Plus / Plus

                                                                         
Query: 76    ttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaaact 135
             ||||| |||||||||||||||||||| || |||||| || | |||||||| ||||| || 
Sbjct: 16066 ttttccttcaagcctttcaaccaatcgatacgaccttgtagagcagctttagctaagacc 16125

                                                                         
Query: 136   cgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagggaagccctt 195
             |||||||||||||| ||||| ||||| ||||| |||||||| |||||||| || ||||||
Sbjct: 16126 cgagcagtttcttggaaactcgcttcggatataaaactttgagtattcagagatgccctt 16185

                           
Query: 196   gttattcccaataa 209
             |||||||| |||||
Sbjct: 16186 gttattcctaataa 16199



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 325   acttttgatgttacttggcgtataataatctctatatg 362
             ||||| ||||| | |||||||| |||||||||||||||
Sbjct: 16315 actttcgatgtcatttggcgtacaataatctctatatg 16352

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  119 bits (60), Expect = 1e-23
 Identities = 63/64 (98%)
 Strand = Plus / Plus

                                                                           
Query: 117     ggcagcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttg 176
               |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 5782214 ggcagcttttgctaaaactcgagcagtttcttgaaaacttgcttcatatatgaaactttg 5782273

                   
Query: 177     ggta 180
               ||||
Sbjct: 5782274 ggta 5782277

---

>gb|AC146619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNAa0021B21, from chromosome 3, complete sequence
          Length = 139208

 Score =  119 bits (60), Expect = 1e-23
 Identities = 63/64 (98%)
 Strand = Plus / Plus

                                                                         
Query: 117   ggcagcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttg 176
             |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 11044 ggcagcttttgctaaaactcgagcagtttcttgaaaacttgcttcatatatgaaactttg 11103

                 
Query: 177   ggta 180
             ||||
Sbjct: 11104 ggta 11107

---

>gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0021B21, from chromosome 3, complete sequence
          Length = 166777

 Score =  119 bits (60), Expect = 1e-23
 Identities = 63/64 (98%)
 Strand = Plus / Minus

                                                                         
Query: 117   ggcagcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttg 176
             |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 48957 ggcagcttttgctaaaactcgagcagtttcttgaaaacttgcttcatatatgaaactttg 48898

                 
Query: 177   ggta 180
             ||||
Sbjct: 48897 ggta 48894

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  119 bits (60), Expect = 1e-23
 Identities = 108/124 (87%), Gaps = 4/124 (3%)
 Strand = Plus / Plus

                                                                            
Query: 331      gatgttacttggcgtataataatctctatatgtctattatggatctgtaccccttgggat 390
                ||||||||||||||||||||||||||||||||| |||||| |||  ||||  |||||   
Sbjct: 21024855 gatgttacttggcgtataataatctctatatgtttattatagattcgtacttcttgg--- 21024911

                                                                            
Query: 391      cgataaacctttnggattttattaaccaaagaaatacgactttgggctatggttagctca 450
                 ||||||||||| | || |||||||||||||| |||||||||||||||| ||||| ||||
Sbjct: 21024912 -gataaaccttttgaatcttattaaccaaagatatacgactttgggctacggttaactca 21024970

                    
Query: 451      gctc 454
                ||||
Sbjct: 21024971 gctc 21024974



 Score =  113 bits (57), Expect = 7e-22
 Identities = 147/174 (84%), Gaps = 4/174 (2%)
 Strand = Plus / Minus

                                                                           
Query: 2       ttcttgtcttgtggggaacgatgcacaaatttttggaatccggtacca-caggtataatn 60
               ||||||||||||| | |||  |||||| | |||| ||||||||||||| |||||||||| 
Sbjct: 2909709 ttcttgtcttgtgagtaacagtgcacagaattttagaatccggtaccaacaggtataatc 2909650

                                                                           
Query: 61      nnnnnnagaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgt-ngggc 119
                     ||||||||||||||||||| ||||||||| |||||||| |||||||||   || 
Sbjct: 2909649 ccctc-agaactacgttttctttcaggcctttcaatcaatcaatacgacctcgtaaaggt 2909591

                                                                     
Query: 120     agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaact 173
               || ||||||| |||| ||||||||||||| |||||||||| |||||||||||||
Sbjct: 2909590 agattttgct-aaacccgagcagtttcttaaaaacttgctccagatatgaaact 2909538



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                        
Query: 200     ttcccaataagattgcccgataatagatcgattcatccaaagctcgccctgctcgtt 256
               |||||||||||||||| ||||||||||| ||||||||||||||  ||||||||||||
Sbjct: 2909526 ttcccaataagattgctcgataatagattgattcatccaaagcctgccctgctcgtt 2909470

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  119 bits (60), Expect = 1e-23
 Identities = 63/64 (98%)
 Strand = Plus / Plus

                                                                           
Query: 117     ggcagcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttg 176
               |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 5781427 ggcagcttttgctaaaactcgagcagtttcttgaaaacttgcttcatatatgaaactttg 5781486

                   
Query: 177     ggta 180
               ||||
Sbjct: 5781487 ggta 5781490

---

>dbj|AP004666.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0431A03
          Length = 149500

 Score =  119 bits (60), Expect = 1e-23
 Identities = 108/124 (87%), Gaps = 4/124 (3%)
 Strand = Plus / Plus

                                                                         
Query: 331   gatgttacttggcgtataataatctctatatgtctattatggatctgtaccccttgggat 390
             ||||||||||||||||||||||||||||||||| |||||| |||  ||||  |||||   
Sbjct: 91030 gatgttacttggcgtataataatctctatatgtttattatagattcgtacttcttgg--- 91086

                                                                         
Query: 391   cgataaacctttnggattttattaaccaaagaaatacgactttgggctatggttagctca 450
              ||||||||||| | || |||||||||||||| |||||||||||||||| ||||| ||||
Sbjct: 91087 -gataaaccttttgaatcttattaaccaaagatatacgactttgggctacggttaactca 91145

                 
Query: 451   gctc 454
             ||||
Sbjct: 91146 gctc 91149

---

>dbj|AP002054.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: T15D2
          Length = 87219

 Score =  119 bits (60), Expect = 1e-23
 Identities = 111/127 (87%), Gaps = 1/127 (0%)
 Strand = Plus / Plus

                                                                         
Query: 364   ctattatggatctgtaccccttgggatcgataaacctttnggattttattaaccaaagaa 423
             |||||||| ||||  |||||||||||||||||||||||| | || |||| ||||||||||
Sbjct: 38904 ctattatgaatctacaccccttgggatcgataaaccttttgaatcttat-aaccaaagaa 38962

                                                                         
Query: 424   atacgactttgggctatggttagctcagctccaatcaagaatccccaagggaccccaaga 483
             |||||||||||  |||| |||| |||||| ||| |||||||||||||||| |  ||||||
Sbjct: 38963 atacgactttgcactatagttaactcagcaccactcaagaatccccaaggaattccaaga 39022

                    
Query: 484   attcttg 490
             |||||||
Sbjct: 39023 attcttg 39029



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 58/63 (92%), Gaps = 1/63 (1%)
 Strand = Plus / Plus

                                                                         
Query: 122   cttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggtat 181
             ||||| |||||||||||||||||| ||||||||||||||| ||||| |||||||| ||||
Sbjct: 38673 ctttttctaaaactcgagcagtttattgaaaacttgcttcggatat-aaactttgagtat 38731

                
Query: 182   tca 184
             |||
Sbjct: 38732 tca 38734

---

>gb|DQ069542.1| Ginkgo biloba RNA polymerase beta'' chain (rpoC2) gene, partial cds;
            chloroplast
          Length = 4125

 Score =  117 bits (59), Expect = 4e-23
 Identities = 115/134 (85%)
 Strand = Plus / Minus

                                                                        
Query: 76   ttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaaact 135
            ||||| ||||||||||||||||||||||| ||||||||  | |||||||| || || || 
Sbjct: 3902 ttttccttcaagcctttcaaccaatcaatacgacctcggagagcagctttagccaagacc 3843

                                                                        
Query: 136  cgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagggaagccctt 195
            ||||||||||| |||||||| ||| | ||||| |||||||| |||| ||| || ||||| 
Sbjct: 3842 cgagcagtttcctgaaaactcgctcctgatataaaactttgagtatccagagatgccctc 3783

                          
Query: 196  gttattcccaataa 209
            ||||||||||||||
Sbjct: 3782 gttattcccaataa 3769



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 65/80 (81%)
 Strand = Plus / Minus

                                                                        
Query: 339  ttggcgtataataatctctatatgtctattatggatctgtaccccttgggatcgataaac 398
            |||||||| |||||||||||||||  ||| ||  ||  | || ||||||||||| |||||
Sbjct: 3639 ttggcgtacaataatctctatatgcttatcataaattcgcactccttgggatcggtaaac 3580

                                
Query: 399  ctttnggattttattaacca 418
            |||| | |||| ||| ||||
Sbjct: 3579 cttttgaatttgattgacca 3560

---

>dbj|AP004461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0443G08
          Length = 162139

 Score =  113 bits (57), Expect = 7e-22
 Identities = 147/174 (84%), Gaps = 4/174 (2%)
 Strand = Plus / Minus

                                                                         
Query: 2     ttcttgtcttgtggggaacgatgcacaaatttttggaatccggtacca-caggtataatn 60
             ||||||||||||| | |||  |||||| | |||| ||||||||||||| |||||||||| 
Sbjct: 82771 ttcttgtcttgtgagtaacagtgcacagaattttagaatccggtaccaacaggtataatc 82712

                                                                         
Query: 61    nnnnnnagaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgt-ngggc 119
                   ||||||||||||||||||| ||||||||| |||||||| |||||||||   || 
Sbjct: 82711 ccctc-agaactacgttttctttcaggcctttcaatcaatcaatacgacctcgtaaaggt 82653

                                                                   
Query: 120   agcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaact 173
             || ||||||| |||| ||||||||||||| |||||||||| |||||||||||||
Sbjct: 82652 agattttgct-aaacccgagcagtttcttaaaaacttgctccagatatgaaact 82600



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                      
Query: 200   ttcccaataagattgcccgataatagatcgattcatccaaagctcgccctgctcgtt 256
             |||||||||||||||| ||||||||||| ||||||||||||||  ||||||||||||
Sbjct: 82588 ttcccaataagattgctcgataatagattgattcatccaaagcctgccctgctcgtt 82532

---

>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome
          Length = 122890

 Score =  111 bits (56), Expect = 3e-21
 Identities = 94/107 (87%)
 Strand = Plus / Plus

                                                                         
Query: 76    ttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaaact 135
             |||||||| || ||||||| ||||||||| |||||||||   || |||||||||||||||
Sbjct: 67817 ttttcttttaaacctttcagccaatcaattcgacctcgtaatgctgcttttgctaaaact 67876

                                                            
Query: 136   cgagcagtttcttgaaaacttgcttcagatatgaaactttgggtatt 182
             |||| ||||||||||||||| ||||| ||||| |||||||| |||||
Sbjct: 67877 cgagtagtttcttgaaaactagcttcggatataaaactttgagtatt 67923

---

>gb|AC146310.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone B1082A06,
             complete sequence
          Length = 135774

 Score =  107 bits (54), Expect = 4e-20
 Identities = 80/89 (89%)
 Strand = Plus / Plus

                                                                         
Query: 518   tcctttcgagattgggggataatgaatcaattgaacgcgcttcaaagatttgntccactt 577
             |||||||||||||  | |||| ||||||||||||||||||||  |||||||| || ||||
Sbjct: 10739 tcctttcgagattcagcgatagtgaatcaattgaacgcgctttgaagatttgttctactt 10798

                                          
Query: 578   ttggaagaccttgcgttatgccactagat 606
             |||||||||||||||||||| ||||||||
Sbjct: 10799 ttggaagaccttgcgttatgtcactagat 10827

---

>gb|AC079935.3| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar
              Nipponbare clone OSJNBa0095C06, from Chromosome 10,
              complete sequence
          Length = 156159

 Score =  107 bits (54), Expect = 4e-20
 Identities = 80/89 (89%)
 Strand = Plus / Plus

                                                                          
Query: 518    tcctttcgagattgggggataatgaatcaattgaacgcgcttcaaagatttgntccactt 577
              |||||||||||||  | |||| ||||||||||||||||||||  |||||||| || ||||
Sbjct: 140797 tcctttcgagattcagcgatagtgaatcaattgaacgcgctttgaagatttgttctactt 140856

                                           
Query: 578    ttggaagaccttgcgttatgccactagat 606
              |||||||||||||||||||| ||||||||
Sbjct: 140857 ttggaagaccttgcgttatgtcactagat 140885

---

>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome
          Length = 138829

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 80/91 (87%)
 Strand = Plus / Plus

                                                                         
Query: 76    ttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaaact 135
             |||||||||| |||||||||||||||||| |||||||||   ||||||   ||||| |||
Sbjct: 21611 ttttctttcaggcctttcaaccaatcaattcgacctcgtattgcagctcgagctaatact 21670

                                            
Query: 136   cgagcagtttcttgaaaacttgcttcagata 166
             |||| ||||||||||||||||||||| ||||
Sbjct: 21671 cgagtagtttcttgaaaacttgcttccgata 21701

---

>dbj|AB087420.1| Anthoceros formosae chloroplast rpoC2 mRNA for RNA polymerase beta''
            subunit, complete cds
          Length = 4494

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 111/134 (82%)
 Strand = Plus / Minus

                                                                        
Query: 76   ttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaaact 135
            |||||||| || ||||| ||||| ||||| ||||||||  | || ||||| ||||| |||
Sbjct: 4138 ttttcttttaacccttttaaccagtcaattcgacctcgaagagcggctttggctaatact 4079

                                                                        
Query: 136  cgagcagtttcttgaaaacttgcttcagatatgaaactttgggtattcagggaagccctt 195
            || | ||||||||||||||| ||||| ||||| ||||| || ||||| || || ||| ||
Sbjct: 4078 cgggtagtttcttgaaaactggcttccgatataaaactctgagtattgagagacgccttt 4019

                          
Query: 196  gttattcccaataa 209
            |||||||| |||||
Sbjct: 4018 gttattcctaataa 4005

---

>gb|AC136501.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0044M15, complete sequence
          Length = 144568

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 63/70 (90%)
 Strand = Plus / Plus

                                                                         
Query: 324   cacttttgatgttacttggcgtataataatctctatatgtctattatggatctgtacccc 383
             |||||||||||||||||| || | ||||||||| ||||||||||||||||||||||| ||
Sbjct: 60416 cacttttgatgttacttgacgcacaataatctcgatatgtctattatggatctgtactcc 60475

                       
Query: 384   ttgggatcga 393
              ||| |||||
Sbjct: 60476 ctggtatcga 60485

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 63/70 (90%)
 Strand = Plus / Minus

                                                                            
Query: 324      cacttttgatgttacttggcgtataataatctctatatgtctattatggatctgtacccc 383
                |||||||||||||||||| || | ||||||||| ||||||||||||||||||||||| ||
Sbjct: 10757056 cacttttgatgttacttgacgcacaataatctcgatatgtctattatggatctgtactcc 10756997

                          
Query: 384      ttgggatcga 393
                 ||| |||||
Sbjct: 10756996 ctggtatcga 10756987

---

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 63/70 (90%)
 Strand = Plus / Minus

                                                                            
Query: 324      cacttttgatgttacttggcgtataataatctctatatgtctattatggatctgtacccc 383
                |||||||||||||||||| || | ||||||||| ||||||||||||||||||||||| ||
Sbjct: 10836245 cacttttgatgttacttgacgcacaataatctcgatatgtctattatggatctgtactcc 10836186

                          
Query: 384      ttgggatcga 393
                 ||| |||||
Sbjct: 10836185 ctggtatcga 10836176

---

>gb|DQ279899.1| Crithopsis delileana translation initiation factor gene, partial
           cds
          Length = 1494

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 41/41 (100%)
 Strand = Plus / Minus

                                                    
Query: 1   gttcttgtcttgtggggaacgatgcacaaatttttggaatc 41
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 gttcttgtcttgtggggaacgatgcacaaatttttggaatc 544

---

>dbj|AB029695.1| Abies veitchii DNA, rpoC2 gene for RNA polymerase bata-subunit,
           partial cds, and rpoC2-rps2 intergenic spacer
          Length = 522

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                       
Query: 76  ttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaaact 135
           ||||| |||||||||||||||| ||| || |||||| || | |||||||| ||||| || 
Sbjct: 100 ttttccttcaagcctttcaaccgatcgatacgaccttgtagagcagctttagctaagacc 41

                                                   
Query: 136 cgagcagtttcttgaaaacttgcttcagatatgaaacttt 175
           ||||||||||| || ||||| ||||| ||||| |||||||
Sbjct: 40  cgagcagtttcctggaaactcgcttcggatataaaacttt 1

---

>dbj|AB029694.1| Abies sibirica DNA, rpoC2 gene for RNA polymerase bata-subunit,
           partial cds, and rpoC2-rps2 intergenic spacer
          Length = 548

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                       
Query: 76  ttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaaact 135
           ||||| |||||||||||||||| ||| || |||||| || | |||||||| ||||| || 
Sbjct: 100 ttttccttcaagcctttcaaccgatcgatacgaccttgtagagcagctttagctaagacc 41

                                                   
Query: 136 cgagcagtttcttgaaaacttgcttcagatatgaaacttt 175
           ||||||||||| || ||||| ||||| ||||| |||||||
Sbjct: 40  cgagcagtttcctggaaactcgcttcggatataaaacttt 1

---

>dbj|AB029693.1| Abies sachalinensis DNA, rpoC2 gene for RNA polymerase
           bata-subunit, partial cds, and rpoC2-rps2 intergenic
           spacer
          Length = 522

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                       
Query: 76  ttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaaact 135
           ||||| |||||||||||||||| ||| || |||||| || | |||||||| ||||| || 
Sbjct: 100 ttttccttcaagcctttcaaccgatcgatacgaccttgtagagcagctttagctaagacc 41

                                                   
Query: 136 cgagcagtttcttgaaaacttgcttcagatatgaaacttt 175
           ||||||||||| || ||||| ||||| ||||| |||||||
Sbjct: 40  cgagcagtttcctggaaactcgcttcggatataaaacttt 1

---

>dbj|AB029692.1| Abies nephrolepis DNA, rpoC2 gene for RNA polymerase bata-subunit,
           partial cds, and rpoC2-rps2 intergenic spacer
          Length = 522

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                       
Query: 76  ttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaaact 135
           ||||| |||||||||||||||| ||| || |||||| || | |||||||| ||||| || 
Sbjct: 100 ttttccttcaagcctttcaaccgatcgatacgaccttgtagagcagctttagctaagacc 41

                                                   
Query: 136 cgagcagtttcttgaaaacttgcttcagatatgaaacttt 175
           ||||||||||| || ||||| ||||| ||||| |||||||
Sbjct: 40  cgagcagtttcctggaaactcgcttcggatataaaacttt 1

---

>dbj|AB029691.1| Abies mariesii DNA, rpoC2 gene for RNA polymerase bata-subunit,
           partial cds, and rpoC2-rps2 intergenic spacer
          Length = 518

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                       
Query: 76  ttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaaact 135
           ||||| |||||||||||||||| ||| || |||||| || | |||||||| ||||| || 
Sbjct: 100 ttttccttcaagcctttcaaccgatcgatacgaccttgtagagcagctttagctaagacc 41

                                                   
Query: 136 cgagcagtttcttgaaaacttgcttcagatatgaaacttt 175
           ||||||||||| || ||||| ||||| ||||| |||||||
Sbjct: 40  cgagcagtttcctggaaactcgcttcggatataaaacttt 1

---

>dbj|AB029690.1| Abies lasiocarpa DNA, rpoC2 gene for RNA polymerase bata-subunit,
           partial cds, and rpoC2-rps2 intergenic spacer
          Length = 518

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                       
Query: 76  ttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaaact 135
           ||||| |||||||||||||||| ||| || |||||| || | |||||||| ||||| || 
Sbjct: 100 ttttccttcaagcctttcaaccgatcgatacgaccttgtagagcagctttagctaagacc 41

                                                   
Query: 136 cgagcagtttcttgaaaacttgcttcagatatgaaacttt 175
           ||||||||||| || ||||| ||||| ||||| |||||||
Sbjct: 40  cgagcagtttcctggaaactcgcttcggatataaaacttt 1

---

>dbj|AB029689.1| Abies koreana DNA, rpoC2 gene for RNA polymerase bata-subunit,
           partial cds, and rpoC2-rps2 intergenic spacer
          Length = 522

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                       
Query: 76  ttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaaact 135
           ||||| |||||||||||||||| ||| || |||||| || | |||||||| ||||| || 
Sbjct: 100 ttttccttcaagcctttcaaccgatcgatacgaccttgtagagcagctttagctaagacc 41

                                                   
Query: 136 cgagcagtttcttgaaaacttgcttcagatatgaaacttt 175
           ||||||||||| || ||||| ||||| ||||| |||||||
Sbjct: 40  cgagcagtttcctggaaactcgcttcggatataaaacttt 1

---

>dbj|AB029688.1| Abies homolepis DNA, rpoC2 gene for RNA polymerase bata-subunit,
           partial cds, and rpoC2-rps2 intergenic spacer
          Length = 522

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                       
Query: 76  ttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaaact 135
           ||||| |||||||||||||||| ||| || |||||| || | |||||||| ||||| || 
Sbjct: 100 ttttccttcaagcctttcaaccgatcgatacgaccttgtagagcagctttagctaagacc 41

                                                   
Query: 136 cgagcagtttcttgaaaacttgcttcagatatgaaacttt 175
           ||||||||||| || ||||| ||||| ||||| |||||||
Sbjct: 40  cgagcagtttcctggaaactcgcttcggatataaaacttt 1

---

>dbj|AB029687.1| Abies holophylla DNA, rpoC2 gene for RNA polymerase bata-subunit,
           partial cds, and rpoC2-rps2 intergenic spacer
          Length = 522

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                       
Query: 76  ttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaaact 135
           ||||| |||||||||||||||| ||| || |||||| || | |||||||| ||||| || 
Sbjct: 100 ttttccttcaagcctttcaaccgatcgatacgaccttgtagagcagctttagctaagacc 41

                                                   
Query: 136 cgagcagtttcttgaaaacttgcttcagatatgaaacttt 175
           ||||||||||| || ||||| ||||| ||||| |||||||
Sbjct: 40  cgagcagtttcctggaaactcgcttcggatataaaacttt 1

---

>dbj|AB029686.1| Abies fraseri DNA, rpoC2 gene for RNA polymerase bata-subunit,
           partial cds, and rpoC2-rps2 intergenic spacer
          Length = 518

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                       
Query: 76  ttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaaact 135
           ||||| |||||||||||||||| ||| || |||||| || | |||||||| ||||| || 
Sbjct: 100 ttttccttcaagcctttcaaccgatcgatacgaccttgtagagcagctttagctaagacc 41

                                                   
Query: 136 cgagcagtttcttgaaaacttgcttcagatatgaaacttt 175
           ||||||||||| || ||||| ||||| ||||| |||||||
Sbjct: 40  cgagcagtttcctggaaactcgcttcggatataaaacttt 1

---

>dbj|AB029685.1| Abies firma DNA, rpoC2 gene for RNA polymerase bata-subunit,
           partial cds, and rpoC2-rps2 intergenic spacer
          Length = 522

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                       
Query: 76  ttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaaact 135
           ||||| |||||||||||||||| ||| || |||||| || | |||||||| ||||| || 
Sbjct: 100 ttttccttcaagcctttcaaccgatcgatacgaccttgtagagcagctttagctaagacc 41

                                                   
Query: 136 cgagcagtttcttgaaaacttgcttcagatatgaaacttt 175
           ||||||||||| || ||||| ||||| ||||| |||||||
Sbjct: 40  cgagcagtttcctggaaactcgcttcggatataaaacttt 1

---

>dbj|AB029684.1| Abies fargesii DNA, rpoC2 gene for RNA polymerase bata-subunit,
           partial cds, and rpoC2-rps2 intergenic spacer
          Length = 522

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                       
Query: 76  ttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaaact 135
           ||||| |||||||||||||||| ||| || |||||| || | |||||||| ||||| || 
Sbjct: 100 ttttccttcaagcctttcaaccgatcgatacgaccttgtagagcagctttagctaagacc 41

                                                   
Query: 136 cgagcagtttcttgaaaacttgcttcagatatgaaacttt 175
           ||||||||||| || ||||| ||||| ||||| |||||||
Sbjct: 40  cgagcagtttcctggaaactcgcttcggatataaaacttt 1

---

>dbj|AB029683.1| Abies fabri DNA, rpoC2 gene for RNA polymerase bata-subunit,
           partial cds, and rpoC2-rps2 intergenic spacer
          Length = 509

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                       
Query: 76  ttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaaact 135
           ||||| |||||||||||||||| ||| || |||||| || | |||||||| ||||| || 
Sbjct: 100 ttttccttcaagcctttcaaccgatcgatacgaccttgtagagcagctttagctaagacc 41

                                                   
Query: 136 cgagcagtttcttgaaaacttgcttcagatatgaaacttt 175
           ||||||||||| || ||||| ||||| ||||| |||||||
Sbjct: 40  cgagcagtttcctggaaactcgcttcggatataaaacttt 1

---

>dbj|AB077118.1| Prunus persica mRNA, microsatellite marker MA004b
          Length = 276

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 66/75 (88%)
 Strand = Plus / Plus

                                                                       
Query: 413 taaccaaagaaatacgactttgggctatggttagctcagctccaatcaagaatccccaag 472
           |||||||||| |||||||||||  |||| ||||||||||| |||||||| ||||||||||
Sbjct: 1   taaccaaagagatacgactttgtactatagttagctcagcaccaatcaaaaatccccaag 60

                          
Query: 473 ggaccccaagaattc 487
           | |  ||||||||||
Sbjct: 61  gaattccaagaattc 75

---

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 45/47 (95%)
 Strand = Plus / Minus

                                                               
Query: 3        tcttgtcttgtggggaacgatgcacaaatttttggaatccggtacca 49
                |||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 10259823 tcttgtcttgtgggtaacggtgcacaaatttttggaatccggtacca 10259777

---

>dbj|AP005659.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0649C11
          Length = 138870

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 45/47 (95%)
 Strand = Plus / Minus

                                                            
Query: 3     tcttgtcttgtggggaacgatgcacaaatttttggaatccggtacca 49
             |||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 64050 tcttgtcttgtgggtaacggtgcacaaatttttggaatccggtacca 64004

---

>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome
          Length = 150568

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 73/86 (84%)
 Strand = Plus / Plus

                                                                         
Query: 76    ttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagcttttgctaaaact 135
             ||||||||||| || |||| ||||||||| || || ||  |||||||||| || || |||
Sbjct: 16022 ttttctttcaaccccttcagccaatcaattcggccgcgaagggcagctttagccaatact 16081

                                       
Query: 136   cgagcagtttcttgaaaacttgcttc 161
             ||||  ||||||||||||||||||||
Sbjct: 16082 cgagtggtttcttgaaaacttgcttc 16107

---

>dbj|AB206662.1| Symplocarpus nabekuraensis chloroplast rps2, rpoC2 genes for
           ribosomal protein S2, RNA polymerase beta'' subunit,
           partial cds
          Length = 932

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 73/87 (83%), Gaps = 1/87 (1%)
 Strand = Plus / Plus

                                                                       
Query: 29  aatttttggaatccggtacca-caggtataatnnnnnnnagaactacgttttctttcaag 87
           ||||||||||||||||||||| ||||||||||       ||||| || || |||||||  
Sbjct: 843 aatttttggaatccggtaccaacaggtataatcccccccagaacaacattctctttcagt 902

                                      
Query: 88  cctttcaaccaatcaatgcgacctcgt 114
           ||||||||||||||||| |||||||||
Sbjct: 903 cctttcaaccaatcaatacgacctcgt 929

---

>dbj|AB206660.1| Symplocarpus foetidus chloroplast rps2, rpoC2 genes for ribosomal
           protein S2, RNA polymerase beta'' subunit, partial cds
          Length = 930

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 73/87 (83%), Gaps = 1/87 (1%)
 Strand = Plus / Plus

                                                                       
Query: 29  aatttttggaatccggtacca-caggtataatnnnnnnnagaactacgttttctttcaag 87
           ||||||||||||||||||||| ||||||||||       ||||| || || |||||||  
Sbjct: 841 aatttttggaatccggtaccaacaggtataatcccccccagaacaacattctctttcagt 900

                                      
Query: 88  cctttcaaccaatcaatgcgacctcgt 114
           ||||||||||||||||| |||||||||
Sbjct: 901 cctttcaaccaatcaatacgacctcgt 927

---

>dbj|AB206659.1| Lysichiton camtschatcensis chloroplast rps2, rpoC2 genes for
           ribosomal protein S2, RNA polymerase beta'' subunit,
           partial cds
          Length = 934

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 73/87 (83%), Gaps = 1/87 (1%)
 Strand = Plus / Plus

                                                                       
Query: 29  aatttttggaatccggtacca-caggtataatnnnnnnnagaactacgttttctttcaag 87
           ||||||| ||||||||||||| ||||||||||       ||||| || || ||||||| |
Sbjct: 845 aattttttgaatccggtaccaacaggtataatcccccccagaacaacattctctttcagg 904

                                      
Query: 88  cctttcaaccaatcaatgcgacctcgt 114
           ||||||||||||||||| |||||||||
Sbjct: 905 cctttcaaccaatcaatacgacctcgt 931

---

>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA
          Length = 121024

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                         
Query: 118   gcagcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgg 177
             |||||||||||||||||||  | ||||||||||||||| ||||| || || |||||||| 
Sbjct: 15691 gcagcttttgctaaaactcttgtagtttcttgaaaactagcttctgaaataaaactttga 15632

                  
Query: 178   gtatt 182
             |||||
Sbjct: 15631 gtatt 15627

---

>emb|X70810.2|CLEGCGA Euglena gracilis chloroplast complete genome
          Length = 143171

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                         
Query: 118    gcagcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttg 176
              |||||||||| |||||||| || ||||||||||||||| |||| || ||| ||||||||
Sbjct: 102965 gcagcttttgttaaaactctagtagtttcttgaaaactcgcttgagctataaaactttg 103023

---

>emb|X17191.1|CHEGRPO E.gracilis chloroplast RNA polymerase rpoB-rpoC1-rpoC2 operon
          Length = 12840

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                        
Query: 118   gcagcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttg 176
             |||||||||| |||||||| || ||||||||||||||| |||| || ||| ||||||||
Sbjct: 12749 gcagcttttgttaaaactctagtagtttcttgaaaactcgcttgagctataaaactttg 12691

---

>gb|M22010.1|EGRCPRPS Euglena gracilis chloroplast ribosomal proteins S4 and S11 genes,
           complete cds, RNA polymerase subunit (rpoC2) gene, 3'
           end and tRNA genes
          Length = 3343

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                      
Query: 118 gcagcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttg 176
           |||||||||| |||||||| || ||||||||||||||| |||| || ||| ||||||||
Sbjct: 650 gcagcttttgttaaaactctagtagtttcttgaaaactcgcttgagctataaaactttg 592

---

>emb|V00160.1|CHEGTN E. gracilis genes for val, asn, arg and leu tRNAs
          Length = 1600

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                      
Query: 118 gcagcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttg 176
           |||||||||| |||||||| || ||||||||||||||| |||| || ||| ||||||||
Sbjct: 649 gcagcttttgttaaaactctagtagtttcttgaaaactcgcttgagctataaaactttg 591

---

>dbj|AB206661.1| Symplocarpus nipponicus chloroplast rps2, rpoC2 genes for ribosomal
           protein S2, RNA polymerase beta'' subunit, partial cds
          Length = 929

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 72/87 (82%), Gaps = 1/87 (1%)
 Strand = Plus / Plus

                                                                       
Query: 29  aatttttggaatccggtacca-caggtataatnnnnnnnagaactacgttttctttcaag 87
           ||||||| ||||||||||||| ||||||||||       ||||| || || |||||||  
Sbjct: 840 aattttttgaatccggtaccaacaggtataatcccccccagaacaacattctctttcagt 899

                                      
Query: 88  cctttcaaccaatcaatgcgacctcgt 114
           ||||||||||||||||| |||||||||
Sbjct: 900 cctttcaaccaatcaatacgacctcgt 926

---

>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome
          Length = 118360

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                               
Query: 142   gtttcttgaaaacttgcttcagatatgaaacttt 175
             |||||||||||||||||| ||||||| |||||||
Sbjct: 32408 gtttcttgaaaacttgctgcagatataaaacttt 32441

---

>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome
          Length = 135599

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                         
Query: 121   gcttttgctaaaactcgagcagtttcttgaaaacttgcttcagatatgaaactttgggta 180
             |||||||||||||| ||||  |||||||| ||||||||| |||| || || ||||| |||
Sbjct: 75461 gcttttgctaaaacacgagttgtttcttggaaacttgctgcagaaataaagctttgagta 75520

               
Query: 181   tt 182
             ||
Sbjct: 75521 tt 75522

---

>gb|AC091680.7| Oryza sativa chromosome 10 BAC OSJNBa0034L04 genomic sequence, complete
              sequence
          Length = 148611

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                   
Query: 1      gttcttgtcttgtggggaacgatgcacaaatttttgg 37
              |||||||| ||||||| |||| |||||||||||||||
Sbjct: 142712 gttcttgttttgtgggtaacggtgcacaaatttttgg 142676

---

>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete
             sequence
          Length = 116932

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                  
Query: 1     gttcttgtcttgtggggaacgatgcacaaatttttgg 37
             |||||||| ||||||| |||| |||||||||||||||
Sbjct: 20565 gttcttgttttgtgggtaacggtgcacaaatttttgg 20529

---

>ref|NM_197459.1| Oryza sativa (japonica cultivar-group) RNA polymerase beta'
          subunit-2 5'-partial (OSJNBa0034L04.39), mRNA
          Length = 183

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                              
Query: 1  gttcttgtcttgtggggaacgatgcacaaatttttg 36
          |||||||| ||||||| |||| ||||||||||||||
Sbjct: 36 gttcttgttttgtgggtaacggtgcacaaatttttg 1

---

>gb|DQ160111.1| Taraxacum officinale TO73-1 (To73-1) mRNA, partial cds
          Length = 215

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 571 tccacttttggaagaccttgcgttat 596
           |||||||||||||||||||| |||||
Sbjct: 193 tccacttttggaagaccttgggttat 168

---

>gb|AC116875.10| Mus musculus chromosome 8, clone RP24-426B21, complete sequence
          Length = 188938

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 436    gctatggttagctcagctcca 456
              |||||||||||||||||||||
Sbjct: 153544 gctatggttagctcagctcca 153524

---

>emb|AL035469.7|HS46B1 Human DNA sequence from clone RP1-46B1 on chromosome 6q12, complete
             sequence
          Length = 158204

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 137   gagcagtttcttgaaaacttgcttc 161
             |||||| ||||||||||||||||||
Sbjct: 29539 gagcagcttcttgaaaacttgcttc 29563

---

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 246     ccctgctcgttccgctcgcaa 266
               |||||||||||||||||||||
Sbjct: 3482790 ccctgctcgttccgctcgcaa 3482770

---

>gb|AY363680.1| Yersinia aldovae urease gene locus, and Yut (yut) genes, complete cds
          Length = 7232

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 407  ttttattaaccaaagaaata 426
            ||||||||||||||||||||
Sbjct: 2726 ttttattaaccaaagaaata 2707

---

>gb|AC005249.2| Homo sapiens BAC clone GS1-115J1 from 7, complete sequence
          Length = 162531

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 143    tttcttgaaaacttgcttca 162
              ||||||||||||||||||||
Sbjct: 118236 tttcttgaaaacttgcttca 118255

---

>gb|AC145519.1| Pan troglodytes BAC clone RP43-32M13 from 7, complete sequence
          Length = 155340

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 143   tttcttgaaaacttgcttca 162
             ||||||||||||||||||||
Sbjct: 57713 tttcttgaaaacttgcttca 57732

---

>emb|AL732437.12| Human DNA sequence from clone RP11-116G8 on chromosome 10 Contains the
             NET1 gene for neuroepithelial cell transforming gene 1,
             the gene for calmodulin-like skin protein (CLSP), the
             CALML3 gene for calmodulin-like 3 (CLP) and four CpG
             islands, complete sequence
          Length = 183441

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   tgggtattcagggaagccct 194
             ||||||||||||||||||||
Sbjct: 73228 tgggtattcagggaagccct 73209

---

>gb|AY299195.1| Chenopodium rubrum ribosomal protein S2 and ATPase subunit IV
           bicistronic mRNA, complete cds; nuclear genes for
           plastid products
          Length = 2711

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 55/67 (82%)
 Strand = Plus / Minus

                                                                       
Query: 67  agaactacgttttctttcaagcctttcaaccaatcaatgcgacctcgtngggcagctttt 126
           ||||| ||||||||||| || |||| ||||||||| || || || ||  | || ||||||
Sbjct: 67  agaacaacgttttcttttaatccttgcaaccaatcgatacggccccggagagccgctttt 8

                  
Query: 127 gctaaaa 133
           |||||||
Sbjct: 7   gctaaaa 1

---

>dbj|AK128534.1| Homo sapiens cDNA FLJ46692 fis, clone TRACH3012718
          Length = 4123

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 175  tgggtattcagggaagccct 194
            ||||||||||||||||||||
Sbjct: 1872 tgggtattcagggaagccct 1853

---

>gb|AC108037.3| Homo sapiens BAC clone RP11-168E17 from 4, complete sequence
          Length = 73477

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 349  ataatctctatatgtctatt 368
            ||||||||||||||||||||
Sbjct: 8980 ataatctctatatgtctatt 8961

---

>gb|AC093565.4| Homo sapiens chromosome 1 clone RP5-1033H14, complete sequence
          Length = 93870

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                         
Query: 574   acttttggaagacct-tgcgttatgcca 600
             ||||||||||||||| ||||||||||||
Sbjct: 20627 acttttggaagacctctgcgttatgcca 20654

---

>gb|AC016647.7| Homo sapiens chromosome 16 clone RP11-89G14, complete sequence
          Length = 160358

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 71     ctacgttttctttcaagcct 90
              ||||||||||||||||||||
Sbjct: 108631 ctacgttttctttcaagcct 108612

---

>emb|AL132952.1|CEY51H4A Caenorhabditis elegans YAC Y51H4A, complete sequence
          Length = 269619

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 124   tttgctaaaactcgagcagtttct 147
             |||| |||||||||||||||||||
Sbjct: 46250 tttgttaaaactcgagcagtttct 46227



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 124   tttgctaaaactcgagcagtttct 147
             |||| |||||||||||||||||||
Sbjct: 43012 tttgttaaaactcgagcagtttct 42989

---

>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome
          Length = 131183

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                         
Query: 141   agtttcttgaaaacttgcttcagatatgaaactttgggtattcagggaagcccttgttat 200
             ||||||||||||||| ||||| || || ||||| |  ||||| |  ||||| ||||||||
Sbjct: 15830 agtttcttgaaaactagcttctgaaataaaactgtaagtatttaaagaagctcttgttat 15771

                         
Query: 201   tcccaataagat 212
             ||| || |||||
Sbjct: 15770 tcctaacaagat 15759

---

>gb|AC087362.13| Homo sapiens chromosome 8, clone RP11-513D5, complete sequence
          Length = 142170

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 407   ttttattaaccaaagaaata 426
             ||||||||||||||||||||
Sbjct: 56911 ttttattaaccaaagaaata 56930

---

>emb|AL831877.1|HSM803202 Homo sapiens mRNA; cDNA DKFZp547H1510 (from clone DKFZp547H1510)
          Length = 546

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 175 tgggtattcagggaagccct 194
           ||||||||||||||||||||
Sbjct: 96  tgggtattcagggaagccct 77

---

>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome
          Length = 191952

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 141   agtttcttgaaaacttgcttcaga 164
             ||||||||||||||||||| ||||
Sbjct: 49857 agtttcttgaaaacttgctgcaga 49880


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,094,490
Number of Sequences: 3902068
Number of extensions: 4094490
Number of successful extensions: 66771
Number of sequences better than 10.0: 148
Number of HSP's better than 10.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 65910
Number of HSP's gapped (non-prelim): 786
length of query: 608
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 585
effective length of database: 17,143,297,704
effective search space: 10028829156840
effective search space used: 10028829156840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---