ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd27j06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF155334.1|AF155334 Oryza sativa NADP-specific isocitrate deh... 125 1e-25
2ref|NM_192424.1| Oryza sativa (japonica cultivar-group), predic... 117 3e-23
3dbj|AK061752.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 3e-23
4gb|AY111226.1| Zea mays CL7227_-2 mRNA sequence 117 3e-23
5gb|AF155333.2|AF155333 Oryza sativa NADP-specific isocitrate deh... 117 3e-23
6gb|BT017177.1| Zea mays clone EL01N0369B08.c mRNA sequence 107 2e-20
7gb|AY107138.1| Zea mays PCO115488 mRNA sequence 107 2e-20
8gb|BT019016.1| Zea mays clone Contig512.F mRNA sequence 82 1e-12
9gb|AY105031.1| Zea mays PCO072845 mRNA sequence 82 1e-12
10gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome... 76 9e-11
11dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 76 9e-11
12dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 74 3e-10
13dbj|AP003212.4| Oryza sativa (japonica cultivar-group) genomic D... 74 3e-10
14dbj|AP003709.2| Oryza sativa (japonica cultivar-group) genomic D... 74 3e-10
15emb|X75638.1|STNICD S.tuberosum mRNA for NADP-dependent isocitr... 68 2e-08
16dbj|AB019327.1| Daucus carota mRNA for NADP specific isocitrate ... 62 1e-06
17emb|X77944.1|NTNIDH N.tabacum (Xanthi) NADP-dependent Isocitrate... 60 5e-06
18ref|NM_105265.2| Arabidopsis thaliana isocitrate dehydrogenase (... 56 8e-05
19emb|AJ437268.1|ATH437268 Arabidopsis thaliana mRNA for isocitrat... 56 8e-05
20gb|AY097340.1| Arabidopsis thaliana At1g65930/F12P19_10 mRNA, co... 56 8e-05
21gb|AF419575.1|AF419575 Arabidopsis thaliana At1g65930/F12P19_10 ... 56 8e-05
22dbj|AK220845.1| Arabidopsis thaliana mRNA for NADP specific isoc... 56 8e-05
23gb|AY045631.1| Arabidopsis thaliana At1g65930/F12P19_10 mRNA, co... 56 8e-05
24gb|AY088129.1| Arabidopsis thaliana clone 41544 mRNA, complete s... 56 8e-05
25gb|BT002400.1| Arabidopsis thaliana isocitrate dehydrogenase, pu... 56 8e-05
26gb|AC009513.2|F12P19 Sequence of BAC F12P19 from Arabidopsis tha... 56 8e-05
27dbj|AB109113.1| Lupinus albus LaICDH1;1 mRNA for NADP-specific i... 54 3e-04
28emb|X97063.1|EGNADPID Eucalyptus globulus subsp. bicostata mRNA ... 54 3e-04
29gb|U80912.1|EGU80912 Eucalyptus globulus NADP-isocitrate dehydro... 54 3e-04
30emb|AJ276727.1|ATH276727 Arabidopsis thaliana partial mRNA, clon... 52 0.001
31dbj|AB243085.1| Codonopsis lanceolata mRNA for NADP-isocitrate d... 50 0.005
32gb|AY104847.1| Zea mays PCO066525 mRNA sequence 50 0.005
33gb|AY093091.1| Arabidopsis thaliana similar to NADP-specific iso... 48 0.019
34gb|AF095445.1|AF095445 Glycine max NADP-dependent isocitrate deh... 48 0.019
35emb|Y12540.1|AGIDHC A.graveolens mRNA for isocitrate dehydrogena... 46 0.077
36ref|XM_473117.1| Oryza sativa (japonica cultivar-group), predic... 44 0.30
37emb|CR955008.2| Medicago truncatula chromosome 5 clone mte1-51b2... 44 0.30
38emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4,... 44 0.30
39dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.30
40gb|AF176669.1|AF176669 Citrus limon NADP-isocitrate dehydrogenas... 44 0.30
41dbj|AK070042.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.30
42gb|AC122005.3| Mus musculus chromosome 5 clone RP24-340B11, comp... 42 1.2
43gb|AC137154.2| Mus musculus BAC clone RP24-572L22 from chromosom... 42 1.2
44gb|AC146567.10| Medicago truncatula clone mth2-99p24, complete s... 42 1.2
45gb|AC068061.6| Homo sapiens chromosome 10 clone RP11-444F4, comp... 42 1.2
46ref|NM_121463.3| Arabidopsis thaliana isocitrate dehydrogenase (... 40 4.7
47gb|AC150651.3| Bos taurus BAC CH240-451E16 (Children's Hospital... 40 4.7
48gb|AC115867.12| Mus musculus chromosome 6, clone RP24-326P23, co... 40 4.7
49ref|XM_532167.2| PREDICTED: Canis familiaris similar to Phosphog... 40 4.7
50gb|AC123944.4| Mus musculus BAC clone RP24-87F18 from chromosome... 40 4.7
51gb|AC122429.3| Mus musculus BAC clone RP24-175I3 from chromosome... 40 4.7
52gb|AC164636.4| Mus musculus BAC clone RP23-70P16 from chromosome... 40 4.7
53gb|BT000276.1| Arabidopsis thaliana isocitrate dehydrogenase-lik... 40 4.7
54emb|Y14686.1|ATY14686 Arabidopsis thaliana pnp gene, exons 1 to 10 40 4.7
55emb|AL163792.1|ATT15N1 Arabidopsis thaliana DNA chromosome 5, BA... 40 4.7
56emb|AJ315378.1|ECA315378 Equus caballus CRISP1 gene for cystein-... 40 4.7
57gb|AY099683.1| Arabidopsis thaliana isocitrate dehydrogenase-lik... 40 4.7 
>gb|AF155334.1|AF155334 Oryza sativa NADP-specific isocitrate dehydrogenase mRNA, complete
            cds
          Length = 1503

 Score =  125 bits (63), Expect = 1e-25
 Identities = 111/127 (87%)
 Strand = Plus / Minus

                                                                        
Query: 181  cttgatttgagctcagcagcaactgcgtcaatgaactcttcagtgttcaggtaatcactt 240
            |||||| |||||||  ||||||| || || ||||||||||||||||||||||||| ||| 
Sbjct: 1306 cttgatctgagctcgtcagcaacagcatcgatgaactcttcagtgttcaggtaatgactc 1247

                                                                        
Query: 241  cttgtcacttttgaagatccatgaacaaggagtgcaaggtccttagtcatcttcccagac 300
            || || || ||||||||||| |||||||| || ||||||||||| |||||||||||||||
Sbjct: 1246 ctcgtgacatttgaagatccgtgaacaagcagagcaaggtccttggtcatcttcccagac 1187

                   
Query: 301  tccacag 307
            || ||||
Sbjct: 1186 tcgacag 1180
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>ref|NM_192424.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1239

 Score =  117 bits (59), Expect = 3e-23
 Identities = 140/168 (83%)
 Strand = Plus / Minus

                                                                        
Query: 189  gagctcagcagcaactgcgtcaatgaactcttcagtgttcaggtaatcacttcttgtcac 248
            |||||| |||||||| || ||||||||||||||||||||||||||||  |||||||| ||
Sbjct: 1215 gagctccgcagcaaccgcatcaatgaactcttcagtgttcaggtaatggcttcttgtgac 1156

                                                                        
Query: 249  ttttgaagatccatgaacaaggagtgcaaggtccttagtcatcttcccagactccacagt 308
             |||||||| || |||| ||| || |||||||| || |||||||||||||| ||||| ||
Sbjct: 1155 gtttgaagacccgtgaataagaagagcaaggtctttggtcatcttcccagattccacggt 1096

                                                            
Query: 309  tncgacacacgcttnctcaagtttctgtgcaaattcaanaagtctagc 356
            | | || || ||    ||||||||  ||||||| |||| |||||||||
Sbjct: 1095 tccaacgcaagcagcttcaagttttagtgcaaagtcaagaagtctagc 1048
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>dbj|AK061752.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-H06, full
            insert sequence
          Length = 1686

 Score =  117 bits (59), Expect = 3e-23
 Identities = 140/168 (83%)
 Strand = Plus / Minus

                                                                        
Query: 189  gagctcagcagcaactgcgtcaatgaactcttcagtgttcaggtaatcacttcttgtcac 248
            |||||| |||||||| || ||||||||||||||||||||||||||||  |||||||| ||
Sbjct: 1301 gagctccgcagcaaccgcatcaatgaactcttcagtgttcaggtaatggcttcttgtgac 1242

                                                                        
Query: 249  ttttgaagatccatgaacaaggagtgcaaggtccttagtcatcttcccagactccacagt 308
             |||||||| || |||| ||| || |||||||| || |||||||||||||| ||||| ||
Sbjct: 1241 gtttgaagacccgtgaataagaagagcaaggtctttggtcatcttcccagattccacggt 1182

                                                            
Query: 309  tncgacacacgcttnctcaagtttctgtgcaaattcaanaagtctagc 356
            | | || || ||    ||||||||  ||||||| |||| |||||||||
Sbjct: 1181 tccaacgcaagcagcttcaagttttagtgcaaagtcaagaagtctagc 1134
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>gb|AY111226.1| Zea mays CL7227_-2 mRNA sequence
          Length = 536

 Score =  117 bits (59), Expect = 3e-23
 Identities = 103/118 (87%)
 Strand = Plus / Minus

                                                                       
Query: 190 agctcagcagcaactgcgtcaatgaactcttcagtgttcaggtaatcacttcttgtcact 249
           ||||||| ||| ||||| || ||||||||||| |||||||||||||  ||||| || |||
Sbjct: 344 agctcagtagcgactgcatcgatgaactcttctgtgttcaggtaatggcttctcgtgact 285

                                                                     
Query: 250 tttgaagatccatgaacaaggagtgcaaggtccttagtcatcttcccagactccacag 307
           || ||||||||||||||||| ||||| || || |||| ||||||||||||||||||||
Sbjct: 284 ttggaagatccatgaacaagaagtgcgagatctttagncatcttcccagactccacag 227
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>gb|AF155333.2|AF155333 Oryza sativa NADP-specific isocitrate dehydrogenase mRNA, complete
            cds
          Length = 1594

 Score =  117 bits (59), Expect = 3e-23
 Identities = 140/168 (83%)
 Strand = Plus / Minus

                                                                        
Query: 189  gagctcagcagcaactgcgtcaatgaactcttcagtgttcaggtaatcacttcttgtcac 248
            |||||| |||||||| || ||||||||||||||||||||||||||||  |||||||| ||
Sbjct: 1280 gagctccgcagcaaccgcatcaatgaactcttcagtgttcaggtaatggcttcttgtgac 1221

                                                                        
Query: 249  ttttgaagatccatgaacaaggagtgcaaggtccttagtcatcttcccagactccacagt 308
             |||||||| || |||| ||| || |||||||| || |||||||||||||| ||||| ||
Sbjct: 1220 gtttgaagacccgtgaataagaagagcaaggtctttggtcatcttcccagattccacggt 1161

                                                            
Query: 309  tncgacacacgcttnctcaagtttctgtgcaaattcaanaagtctagc 356
            | | || || ||    ||||||||  ||||||| |||| |||||||||
Sbjct: 1160 tccaacgcaagcagcttcaagttttagtgcaaagtcaagaagtctagc 1113
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>gb|BT017177.1| Zea mays clone EL01N0369B08.c mRNA sequence
          Length = 1434

 Score =  107 bits (54), Expect = 2e-20
 Identities = 105/122 (86%)
 Strand = Plus / Minus

                                                                        
Query: 181  cttgatttgagctcagcagcaactgcgtcaatgaactcttcagtgttcaggtaatcactt 240
            |||||| |||||||| ||||||| |||||||||||||| || |||||||||||||  || 
Sbjct: 1128 cttgatctgagctcatcagcaacagcgtcaatgaactcctccgtgttcaggtaatggctc 1069

                                                                        
Query: 241  cttgtcacttttgaagatccatgaacaaggagtgcaaggtccttagtcatcttcccagac 300
            || || |  ||||||||||| ||||| || || ||||||||||| |||||||||||||||
Sbjct: 1068 ctcgtgatatttgaagatccgtgaacgagaagggcaaggtccttggtcatcttcccagac 1009

              
Query: 301  tc 302
            ||
Sbjct: 1008 tc 1007
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>gb|AY107138.1| Zea mays PCO115488 mRNA sequence
          Length = 1634

 Score =  107 bits (54), Expect = 2e-20
 Identities = 105/122 (86%)
 Strand = Plus / Minus

                                                                        
Query: 181  cttgatttgagctcagcagcaactgcgtcaatgaactcttcagtgttcaggtaatcactt 240
            |||||| |||||||| ||||||| |||||||||||||| || |||||||||||||  || 
Sbjct: 1351 cttgatctgagctcatcagcaacagcgtcaatgaactcctccgtgttcaggtaatggctc 1292

                                                                        
Query: 241  cttgtcacttttgaagatccatgaacaaggagtgcaaggtccttagtcatcttcccagac 300
            || || |  ||||||||||| ||||| || || ||||||||||| |||||||||||||||
Sbjct: 1291 ctcgtgatatttgaagatccgtgaacgagaagggcaaggtccttggtcatcttcccagac 1232

              
Query: 301  tc 302
            ||
Sbjct: 1231 tc 1230
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>gb|BT019016.1| Zea mays clone Contig512.F mRNA sequence
          Length = 1390

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 107/129 (82%)
 Strand = Plus / Minus

                                                                        
Query: 177  cagtcttgatttgagctcagcagcaactgcgtcaatgaactcttcagtgttcaggtaatc 236
            ||||||||||  |||||||| ||| |||||||| |||||||| || ||||||||||||| 
Sbjct: 1143 cagtcttgatcggagctcagtagcgactgcgtcgatgaactcctcggtgttcaggtaatg 1084

                                                                        
Query: 237  acttcttgtcacttttgaagatccatgaacaaggagtgcaaggtccttagtcatcttccc 296
             ||||| || ||  | ||||||||||| ||||| |  || || || ||||||||||||||
Sbjct: 1083 gcttctcgtgacgctggaagatccatggacaagaatcgccagatctttagtcatcttccc 1024

                     
Query: 297  agactccac 305
             ||||||||
Sbjct: 1023 ggactccac 1015
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>gb|AY105031.1| Zea mays PCO072845 mRNA sequence
          Length = 1614

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 107/129 (82%)
 Strand = Plus / Minus

                                                                        
Query: 177  cagtcttgatttgagctcagcagcaactgcgtcaatgaactcttcagtgttcaggtaatc 236
            ||||||||||  |||||||| ||| |||||||| |||||||| || ||||||||||||| 
Sbjct: 1324 cagtcttgatcggagctcagtagcgactgcgtcgatgaactcctcggtgttcaggtaatg 1265

                                                                        
Query: 237  acttcttgtcacttttgaagatccatgaacaaggagtgcaaggtccttagtcatcttccc 296
             ||||| || ||  | ||||||||||| ||||| |  || || || ||||||||||||||
Sbjct: 1264 gcttctcgtgacgctggaagatccatggacaagaatcgccagatctttagtcatcttccc 1205

                     
Query: 297  agactccac 305
             ||||||||
Sbjct: 1204 ggactccac 1196
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>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10,
              complete sequence
          Length = 187034

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                        
Query: 250    tttgaagatccatgaacaaggagtgcaaggtccttagtcatcttcccagactccacag 307
              ||||||||||| |||||||| || ||||||||||| ||||||||||||||||| ||||
Sbjct: 114840 tttgaagatccgtgaacaagcagagcaaggtccttggtcatcttcccagactcgacag 114783



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                     
Query: 181    cttgatttgagctcagcagcaactgcgtcaatgaactcttcagtgttcaggtaat 235
              |||||| |||||||  ||||||| || || |||||||||||||||||||||||||
Sbjct: 115010 cttgatctgagctcgtcagcaacagcatcgatgaactcttcagtgttcaggtaat 114956
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                          
Query: 250      tttgaagatccatgaacaaggagtgcaaggtccttagtcatcttcccagactccacag 307
                ||||||||||| |||||||| || ||||||||||| ||||||||||||||||| ||||
Sbjct: 28330598 tttgaagatccgtgaacaagcagagcaaggtccttggtcatcttcccagactcgacag 28330541



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                       
Query: 181      cttgatttgagctcagcagcaactgcgtcaatgaactcttcagtgttcaggtaat 235
                |||||| |||||||  ||||||| || || |||||||||||||||||||||||||
Sbjct: 28330768 cttgatctgagctcgtcagcaacagcatcgatgaactcttcagtgttcaggtaat 28330714
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                         
Query: 189      gagctcagcagcaactgcgtcaatgaactcttcagtgttcaggtaatcacttcttgt 245
                |||||| |||||||| || ||||||||||||||||||||||||||||  ||||||||
Sbjct: 26526715 gagctccgcagcaaccgcatcaatgaactcttcagtgttcaggtaatggcttcttgt 26526771



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 86/107 (80%)
 Strand = Plus / Plus

                                                                            
Query: 250      tttgaagatccatgaacaaggagtgcaaggtccttagtcatcttcccagactccacagtt 309
                |||||||| || |||| ||| || |||||||| || |||||||||||||| ||||| |||
Sbjct: 26526894 tttgaagacccgtgaataagaagagcaaggtctttggtcatcttcccagattccacggtt 26526953

                                                               
Query: 310      ncgacacacgcttnctcaagtttctgtgcaaattcaanaagtctagc 356
                 | || || ||    ||||||||  ||||||| |||| |||||||||
Sbjct: 26526954 ccaacgcaagcagcttcaagttttagtgcaaagtcaagaagtctagc 26527000
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>dbj|AP003212.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
           BAC clone:OSJNBa0049H05
          Length = 161934

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                    
Query: 189 gagctcagcagcaactgcgtcaatgaactcttcagtgttcaggtaatcacttcttgt 245
           |||||| |||||||| || ||||||||||||||||||||||||||||  ||||||||
Sbjct: 429 gagctccgcagcaaccgcatcaatgaactcttcagtgttcaggtaatggcttcttgt 485



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 86/107 (80%)
 Strand = Plus / Plus

                                                                       
Query: 250 tttgaagatccatgaacaaggagtgcaaggtccttagtcatcttcccagactccacagtt 309
           |||||||| || |||| ||| || |||||||| || |||||||||||||| ||||| |||
Sbjct: 608 tttgaagacccgtgaataagaagagcaaggtctttggtcatcttcccagattccacggtt 667

                                                          
Query: 310 ncgacacacgcttnctcaagtttctgtgcaaattcaanaagtctagc 356
            | || || ||    ||||||||  ||||||| |||| |||||||||
Sbjct: 668 ccaacgcaagcagcttcaagttttagtgcaaagtcaagaagtctagc 714
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>dbj|AP003709.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBb0006H05
          Length = 154821

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                       
Query: 189    gagctcagcagcaactgcgtcaatgaactcttcagtgttcaggtaatcacttcttgt 245
              |||||| |||||||| || ||||||||||||||||||||||||||||  ||||||||
Sbjct: 135334 gagctccgcagcaaccgcatcaatgaactcttcagtgttcaggtaatggcttcttgt 135390



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 86/107 (80%)
 Strand = Plus / Plus

                                                                          
Query: 250    tttgaagatccatgaacaaggagtgcaaggtccttagtcatcttcccagactccacagtt 309
              |||||||| || |||| ||| || |||||||| || |||||||||||||| ||||| |||
Sbjct: 135513 tttgaagacccgtgaataagaagagcaaggtctttggtcatcttcccagattccacggtt 135572

                                                             
Query: 310    ncgacacacgcttnctcaagtttctgtgcaaattcaanaagtctagc 356
               | || || ||    ||||||||  ||||||| |||| |||||||||
Sbjct: 135573 ccaacgcaagcagcttcaagttttagtgcaaagtcaagaagtctagc 135619
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>emb|X75638.1|STNICD S.tuberosum  mRNA for NADP-dependent isocitrate dehydrogenase
          Length = 1569

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                      
Query: 178  agtcttgatttgagctcagcagcaactgcgtcaatgaactcttcagtgttcaggtaat 235
            ||||||| |||||||||| | ||||| ||||||||||||||||| |||||||| ||||
Sbjct: 1300 agtcttgctttgagctcatcggcaacagcgtcaatgaactcttccgtgttcagataat 1243
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>dbj|AB019327.1| Daucus carota mRNA for NADP specific isocitrate dehydrogenase,
            complete cds
          Length = 1512

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                               
Query: 274  gcaaggtccttagtcatcttcccagactccacagt 308
            ||||| |||||||||||||||||||||||||||||
Sbjct: 1228 gcaagatccttagtcatcttcccagactccacagt 1194



 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 202  actgcgtcaatgaactcttcagtgtt 227
            ||||| ||||||||||||||||||||
Sbjct: 1297 actgcatcaatgaactcttcagtgtt 1272
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>emb|X77944.1|NTNIDH N.tabacum (Xanthi) NADP-dependent Isocitrate dehydrogenase mRNA
          Length = 1584

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                              
Query: 178  agtcttgatttgagctcagcagcaactgcgtcaatgaactcttcagtgtt 227
            ||||||| |||||||||| | || || |||||||||||||||||||||||
Sbjct: 1313 agtcttgctttgagctcatcggccacggcgtcaatgaactcttcagtgtt 1264
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>ref|NM_105265.2| Arabidopsis thaliana isocitrate dehydrogenase (NADP+)/ oxidoreductase
            AT1G65930 mRNA, complete cds
          Length = 1663

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 186  tttgagctcagcagcaactgcgtcaatgaactcttcagtgttcaggta 233
            ||||||||||||||| ||||| || |||||||| || |||||||||||
Sbjct: 1379 tttgagctcagcagcgactgcatcgatgaactcctctgtgttcaggta 1332
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>emb|AJ437268.1|ATH437268 Arabidopsis thaliana mRNA for isocitrate dehydrogenase
          Length = 1610

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 186  tttgagctcagcagcaactgcgtcaatgaactcttcagtgttcaggta 233
            ||||||||||||||| ||||| || |||||||| || |||||||||||
Sbjct: 1379 tttgagctcagcagcgactgcatcgatgaactcctctgtgttcaggta 1332
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>gb|AY097340.1| Arabidopsis thaliana At1g65930/F12P19_10 mRNA, complete cds
          Length = 1233

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 186  tttgagctcagcagcaactgcgtcaatgaactcttcagtgttcaggta 233
            ||||||||||||||| ||||| || |||||||| || |||||||||||
Sbjct: 1215 tttgagctcagcagcgactgcatcgatgaactcctctgtgttcaggta 1168
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>gb|AF419575.1|AF419575 Arabidopsis thaliana At1g65930/F12P19_10 mRNA, complete cds
          Length = 1636

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 186  tttgagctcagcagcaactgcgtcaatgaactcttcagtgttcaggta 233
            ||||||||||||||| ||||| || |||||||| || |||||||||||
Sbjct: 1368 tttgagctcagcagcgactgcatcgatgaactcctctgtgttcaggta 1321
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>dbj|AK220845.1| Arabidopsis thaliana mRNA for NADP specific isocitrate
           dehydrogenase like protein, partial cds, clone:
           RAFL22-38-I02
          Length = 517

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 186 tttgagctcagcagcaactgcgtcaatgaactcttcagtgttcaggta 233
           ||||||||||||||| ||||| || |||||||| || |||||||||||
Sbjct: 255 tttgagctcagcagcgactgcatcgatgaactcctctgtgttcaggta 208
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>gb|AY045631.1| Arabidopsis thaliana At1g65930/F12P19_10 mRNA, complete cds
          Length = 1653

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 186  tttgagctcagcagcaactgcgtcaatgaactcttcagtgttcaggta 233
            ||||||||||||||| ||||| || |||||||| || |||||||||||
Sbjct: 1368 tttgagctcagcagcgactgcatcgatgaactcctctgtgttcaggta 1321
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>gb|AY088129.1| Arabidopsis thaliana clone 41544 mRNA, complete sequence
          Length = 1554

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 186  tttgagctcagcagcaactgcgtcaatgaactcttcagtgttcaggta 233
            ||||||||||||||| ||||| || |||||||| || |||||||||||
Sbjct: 1368 tttgagctcagcagcgactgcatcgatgaactcctcggtgttcaggta 1321
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>gb|BT002400.1| Arabidopsis thaliana isocitrate dehydrogenase, putative (At1g65930)
            mRNA, complete cds
          Length = 1581

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 186  tttgagctcagcagcaactgcgtcaatgaactcttcagtgttcaggta 233
            ||||||||||||||| ||||| || |||||||| || |||||||||||
Sbjct: 1368 tttgagctcagcagcgactgcatcgatgaactcctctgtgttcaggta 1321
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>gb|AC009513.2|F12P19 Sequence of BAC F12P19 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 81490

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                             
Query: 186   tttgagctcagcagcaactgcgtcaatgaactcttcagtgttcaggta 233
             ||||||||||||||| ||||| || |||||||| || |||||||||||
Sbjct: 47204 tttgagctcagcagcgactgcatcgatgaactcctctgtgttcaggta 47157
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>dbj|AB109113.1| Lupinus albus LaICDH1;1 mRNA for NADP-specific isocitrate
            dehydrogenase, complete cds
          Length = 1627

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 256  gatccatgaacaaggagtgcaaggtccttagtcatcttcccagactc 302
            |||||||||| || |||||| || ||||| |||||||||||||||||
Sbjct: 1232 gatccatgaagaatgagtgccagatccttggtcatcttcccagactc 1186
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>emb|X97063.1|EGNADPID Eucalyptus globulus subsp. bicostata mRNA for NADP-dependent
           isocitrate dehydrogenase
          Length = 894

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                              
Query: 259 ccatgaacaaggagtgcaaggtccttagtcatcttcccagactccacagtt 309
           |||||||  ||||||||||| ||||| |||||||| |||||||| ||||||
Sbjct: 560 ccatgaatgaggagtgcaagatccttggtcatcttgccagactcaacagtt 510
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>gb|U80912.1|EGU80912 Eucalyptus globulus NADP-isocitrate dehydrogenase (EgICDH) mRNA,
            complete cds
          Length = 1645

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                               
Query: 259  ccatgaacaaggagtgcaaggtccttagtcatcttcccagactccacagtt 309
            |||||||  ||||||||||| ||||| |||||||| |||||||| ||||||
Sbjct: 1311 ccatgaatgaggagtgcaagatccttggtcatcttgccagactcaacagtt 1261
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>emb|AJ276727.1|ATH276727 Arabidopsis thaliana partial mRNA, clone DiDi 2C-1e
          Length = 370

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 188 tgagctcagcagcaactgcgtcaatgaactcttcagtgttcaggta 233
           ||||||||||||| ||||| || |||||||| || |||||||||||
Sbjct: 134 tgagctcagcagcgactgcatcgatgaactcctctgtgttcaggta 89
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>dbj|AB243085.1| Codonopsis lanceolata mRNA for NADP-isocitrate dehydrogenase,
            complete cds
          Length = 1500

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 256  gatccatgaacaaggagtgcaaggtccttagtcatcttcccagactccacagt 308
            |||||||| | || ||||||||| ||||| ||||||||||| || ||||||||
Sbjct: 1245 gatccatggagaatgagtgcaagatcctttgtcatcttccctgattccacagt 1193



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                    
Query: 178  agtcttgatttgagctcagcagcaactgcgtcaatgaactcttcagtgttcaggta 233
            ||||||| ||| |||||| | || || || |||||||| ||||| |||||||||||
Sbjct: 1320 agtcttgctttcagctcatctgccacggcatcaatgaattcttcggtgttcaggta 1265
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>gb|AY104847.1| Zea mays PCO066525 mRNA sequence
          Length = 1776

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 274  gcaaggtccttagtcatcttcccagactccacagttncgacaca 317
            ||||||||||||||||| |||||||| ||||| ||| | |||||
Sbjct: 1416 gcaaggtccttagtcattttcccagattccaccgtttcaacaca 1373
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>gb|AY093091.1| Arabidopsis thaliana similar to NADP-specific isocitrate
            dehydrogenase (At1g65930) mRNA, complete cds
          Length = 1551

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 186  tttgagctcagcagcaactgcgtcaatgaactcttcagtgttcaggta 233
            ||||||||||||||| ||||| || ||||| || || |||||||||||
Sbjct: 1369 tttgagctcagcagcgactgcatcgatgaaatcctctgtgttcaggta 1322
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>gb|AF095445.1|AF095445 Glycine max NADP-dependent isocitrate dehydrogenase (IDH1) mRNA,
            complete cds
          Length = 1827

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 258  tccatgaacaaggagtgcaaggtccttagtcatctt 293
            |||||||||||| |||||||| ||||| ||||||||
Sbjct: 1440 tccatgaacaagaagtgcaagatcctttgtcatctt 1405
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>emb|Y12540.1|AGIDHC A.graveolens mRNA for isocitrate dehydrogenase (NADP+)
          Length = 1535

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 208  tcaatgaactcttcagtgttcag 230
            |||||||||||||||||||||||
Sbjct: 1259 tcaatgaactcttcagtgttcag 1237



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 256  gatccatgaacaaggagtgcaaggtccttagtcatcttcccagactccacagt 308
            |||||||||| ||  || ||||||||||| |||||| | |||| |||||||||
Sbjct: 1214 gatccatgaagaataagagcaaggtccttggtcatccttccagcctccacagt 1162
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>ref|XM_473117.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1407

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 267  aaggagtgcaaggtccttagtcatcttccc 296
            |||||||||||| ||||| |||||||||||
Sbjct: 1299 aaggagtgcaagatcctttgtcatcttccc 1270
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>emb|CR955008.2| Medicago truncatula chromosome 5 clone mte1-51b2, COMPLETE SEQUENCE
          Length = 110446

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 252   tgaagatccatgaacaaggagtgcaa 277
             |||||||||||| |||||||||||||
Sbjct: 40482 tgaagatccatgcacaaggagtgcaa 40457
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>emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L24,
             complete sequence
          Length = 164577

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 267   aaggagtgcaaggtccttagtcatcttccc 296
             |||||||||||| ||||| |||||||||||
Sbjct: 94475 aaggagtgcaagatcctttgtcatcttccc 94446
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 267      aaggagtgcaaggtccttagtcatcttccc 296
                |||||||||||| ||||| |||||||||||
Sbjct: 25367916 aaggagtgcaagatcctttgtcatcttccc 25367887
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>gb|AF176669.1|AF176669 Citrus limon NADP-isocitrate dehydrogenase mRNA, complete cds
          Length = 1708

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 271  agtgcaaggtccttagtcatcttcccagactccacagt 308
            |||||||| ||||| |||||||||||||| || |||||
Sbjct: 1293 agtgcaagatccttggtcatcttcccagattcaacagt 1256
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>dbj|AK070042.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038I06, full
            insert sequence
          Length = 1765

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 267  aaggagtgcaaggtccttagtcatcttccc 296
            |||||||||||| ||||| |||||||||||
Sbjct: 1381 aaggagtgcaagatcctttgtcatcttccc 1352
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>gb|AC122005.3| Mus musculus chromosome 5 clone RP24-340B11, complete sequence
          Length = 183264

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 159   agtggaagaggactttcacag 179
             |||||||||||||||||||||
Sbjct: 67993 agtggaagaggactttcacag 67973
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>gb|AC137154.2| Mus musculus BAC clone RP24-572L22 from chromosome 5, complete sequence
          Length = 173460

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 159    agtggaagaggactttcacag 179
              |||||||||||||||||||||
Sbjct: 159152 agtggaagaggactttcacag 159132
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>gb|AC146567.10| Medicago truncatula clone mth2-99p24, complete sequence
          Length = 141672

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 176   acagtcttgatttgagctcag 196
             |||||||||||||||||||||
Sbjct: 67430 acagtcttgatttgagctcag 67450
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>gb|AC068061.6| Homo sapiens chromosome 10 clone RP11-444F4, complete sequence
          Length = 190007

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 286  gtcatcttcccagactccaca 306
            |||||||||||||||||||||
Sbjct: 5272 gtcatcttcccagactccaca 5292
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>ref|NM_121463.3| Arabidopsis thaliana isocitrate dehydrogenase (NADP+)/ oxidoreductase
            AT5G14590 mRNA, complete cds
          Length = 1801

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 202  actgcgtcaatgaactcttcagtgttca 229
            ||||| |||||||||||||| |||||||
Sbjct: 1520 actgcatcaatgaactcttccgtgttca 1493
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>gb|AC150651.3| Bos taurus  BAC CH240-451E16 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 174648

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 23    taatcgcttgcattttttaataat 46
             |||| |||||||||||||||||||
Sbjct: 44633 taattgcttgcattttttaataat 44656
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>gb|AC115867.12| Mus musculus chromosome 6, clone RP24-326P23, complete sequence
          Length = 162067

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 278   ggtccttagtcatcttccca 297
             ||||||||||||||||||||
Sbjct: 58759 ggtccttagtcatcttccca 58740
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>ref|XM_532167.2| PREDICTED: Canis familiaris similar to Phosphoglycerate kinase,
           testis specific (LOC474933), mRNA
          Length = 1333

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 184 gatttgagctcagcagcaac 203
           ||||||||||||||||||||
Sbjct: 339 gatttgagctcagcagcaac 320
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>gb|AC123944.4| Mus musculus BAC clone RP24-87F18 from chromosome 10, complete sequence
          Length = 194243

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 162    ggaagaggactttcacagtcttga 185
              ||||||||||| ||||||||||||
Sbjct: 110982 ggaagaggactgtcacagtcttga 111005
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>gb|AC122429.3| Mus musculus BAC clone RP24-175I3 from chromosome 6, complete sequence
          Length = 188069

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 278    ggtccttagtcatcttccca 297
              ||||||||||||||||||||
Sbjct: 177848 ggtccttagtcatcttccca 177829
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>gb|AC164636.4| Mus musculus BAC clone RP23-70P16 from chromosome 6, complete sequence
          Length = 212096

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 278   ggtccttagtcatcttccca 297
             ||||||||||||||||||||
Sbjct: 39721 ggtccttagtcatcttccca 39702
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>gb|BT000276.1| Arabidopsis thaliana isocitrate dehydrogenase-like protein
            (At5g14590) mRNA, complete cds
          Length = 1514

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 202  actgcgtcaatgaactcttcagtgttca 229
            ||||| |||||||||||||| |||||||
Sbjct: 1412 actgcatcaatgaactcttccgtgttca 1385
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>emb|Y14686.1|ATY14686 Arabidopsis thaliana pnp gene, exons 1 to 10
          Length = 6400

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 202 actgcgtcaatgaactcttcagtgttca 229
           ||||| |||||||||||||| |||||||
Sbjct: 76  actgcatcaatgaactcttccgtgttca 49
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>emb|AL163792.1|ATT15N1 Arabidopsis thaliana DNA chromosome 5, BAC clone T15N1 (ESSA project)
          Length = 86574

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 202   actgcgtcaatgaactcttcagtgttca 229
             ||||| |||||||||||||| |||||||
Sbjct: 40499 actgcatcaatgaactcttccgtgttca 40526
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>emb|AJ315378.1|ECA315378 Equus caballus CRISP1 gene for cystein-rich secretory protein 1 and
             PGK2 gene for testis-specific phosphoglycerate kinase
          Length = 90631

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 184   gatttgagctcagcagcaac 203
             ||||||||||||||||||||
Sbjct: 76447 gatttgagctcagcagcaac 76428
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>gb|AY099683.1| Arabidopsis thaliana isocitrate dehydrogenase-like protein
            (At5g14590) mRNA, complete cds
          Length = 1722

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 202  actgcgtcaatgaactcttcagtgttca 229
            ||||| |||||||||||||| |||||||
Sbjct: 1517 actgcatcaatgaactcttccgtgttca 1490


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,933,296
Number of Sequences: 3902068
Number of extensions: 2933296
Number of successful extensions: 57652
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57529
Number of HSP's gapped (non-prelim): 121
length of query: 356
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 334
effective length of database: 17,147,199,772
effective search space: 5727164723848
effective search space used: 5727164723848
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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