>AVT1_YEAST (P47082) Vacuolar amino acid transporter 1|
          Length = 602

 Score = 40.0 bits (92), Expect = 0.008
 Identities = 18/80 (22%), Positives = 39/80 (48%)
 Frame = -1

Query: 480 SRIIMVTILTVMASFIPAFGSFVSFVGCTVCALLSFVLPTFFHLNIVGSSMSIWRRVLDY 301
           +RI +  +  ++A   P F   ++F+G  +C  +  +LP +F+L +  +++  W RV  +
Sbjct: 523 NRIFINVVFVLIAINFPEFDKIIAFLGAGLCFTICLILPCWFYLRLCKTTIKPWERVACH 582

Query: 300 XXXXXXXXFAGYGIFTALPS 241
                    +  G+  A+ S
Sbjct: 583 VTICISVVLSTLGVGAAIIS 602

>VIAAT_RAT (O35458) Vesicular inhibitory amino acid transporter (GABA and|
           glycine transporter) (Vesicular GABA transporter)
           (rGVAT) (Solute carrier family 32 member 1)
          Length = 525

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = -1

Query: 477 RIIMVTILTVMASFIPAFGSFVSFVGCTVCALLSFVLPTFFHLNIVGSSMSIWRRVL 307
           R  +V    +MA ++P F   +   G    A L F+LP+ FHL +      +WR++L
Sbjct: 436 RCALVVFTLLMAIYVPHFALLMGLTGSLTGAGLCFLLPSLFHLRL------LWRKLL 486

>VIAAT_MOUSE (O35633) Vesicular inhibitory amino acid transporter (GABA and|
           glycine transporter) (Vesicular GABA transporter)
           (mVIAAT) (mVGAT) (Solute carrier family 32 member 1)
          Length = 525

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = -1

Query: 477 RIIMVTILTVMASFIPAFGSFVSFVGCTVCALLSFVLPTFFHLNIVGSSMSIWRRVL 307
           R  +V    +MA ++P F   +   G    A L F+LP+ FHL +      +WR++L
Sbjct: 436 RCALVVFTLLMAIYVPHFALLMGLTGSLTGAGLCFLLPSLFHLRL------LWRKLL 486

>VIAAT_MACFA (Q95KE2) Vesicular inhibitory amino acid transporter (GABA and|
           glycine transporter) (Vesicular GABA transporter)
           (Solute carrier family 32 member 1)
          Length = 525

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = -1

Query: 477 RIIMVTILTVMASFIPAFGSFVSFVGCTVCALLSFVLPTFFHLNIVGSSMSIWRRVL 307
           R  +V    +MA ++P F   +   G    A L F+LP+ FHL +      +WR++L
Sbjct: 436 RCALVVFTLLMAIYVPHFALLMGLTGSLTGAGLCFLLPSLFHLRL------LWRKLL 486

>VIAAT_HUMAN (Q9H598) Vesicular inhibitory amino acid transporter (GABA and|
           glycine transporter) (Vesicular GABA transporter)
           (hVIAAT) (Solute carrier family 32 member 1)
          Length = 525

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = -1

Query: 477 RIIMVTILTVMASFIPAFGSFVSFVGCTVCALLSFVLPTFFHLNIVGSSMSIWRRVL 307
           R  +V    +MA ++P F   +   G    A L F+LP+ FHL +      +WR++L
Sbjct: 436 RCALVVFTLLMAIYVPHFALLMGLTGSLTGAGLCFLLPSLFHLRL------LWRKLL 486

>CBS_HUMAN (P35520) Cystathionine beta-synthase (EC 4.2.1.22) (Serine|
           sulfhydrase) (Beta-thionase)
          Length = 550

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = -3

Query: 541 WMLPEAFPRCSWRRMARPALE-PHHH 467
           W+ P+A  RC+W ++ RPA E PHHH
Sbjct: 42  WIRPDAPSRCTW-QLGRPASESPHHH 66

>S38A3_HUMAN (Q99624) System N amino acid transporter 1 (SN1) (N-system amino|
           acid transporter 1) (Solute carrier family 38 member 3)
          Length = 504

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 30/141 (21%), Positives = 56/141 (39%), Gaps = 17/141 (12%)
 Frame = -1

Query: 711 IVKFIAA*--YLTFWSS---------------DLCILTVQKIYWQVGLCIALAFTFPVMM 583
           I+ F+AA   YLTF++                D+ IL V+     V +  A+  T P+++
Sbjct: 331 IMYFLAALFGYLTFYNGVESELLHTYSKVDPFDVLILCVR-----VAVLTAVTLTVPIVL 385

Query: 582 HPIHEIVEARFRSSGCFQKLSHGVPGAEWLGLHSSRIIMVTILTVMASFIPAFGSFVSFV 403
            P+   ++     +  F  L H +            + ++T + ++  F P        +
Sbjct: 386 FPVRRAIQQMLFPNQEFSWLRHVLIA----------VGLLTCINLLVIFAPNILGIFGVI 435

Query: 402 GCTVCALLSFVLPTFFHLNIV 340
           G T    L F+ P  F+  I+
Sbjct: 436 GATSAPFLIFIFPAIFYFRIM 456

>UNC47_CAEEL (P34579) Vesicular GABA transporter (Uncoordinated protein 47)|
           (Protein unc-47)
          Length = 486

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 17/58 (29%), Positives = 28/58 (48%)
 Frame = -1

Query: 477 RIIMVTILTVMASFIPAFGSFVSFVGCTVCALLSFVLPTFFHLNIVGSSMSIWRRVLD 304
           RII+V     +A  +P     +  VG     +LSF+ P  FHL I   +++ + +  D
Sbjct: 398 RIILVLFTLFVALSVPYLVELMGLVGNITGTMLSFIWPALFHLYIKEKTLNNFEKRFD 455

>COAT_PSVJ (P22116) Coat protein (Capsid protein) (CP)|
          Length = 217

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
 Frame = +2

Query: 329 IDDPTMLRWKKVGSTKESSAQTVHPTKETKDPNAGMKDAITVKIVTM------MMRLECR 490
           +D PT +  +K       ++  V PTK  K  + G +  + V +          ++L   
Sbjct: 52  LDHPTFVSSRKCAKGYTYTSLDVRPTKTEKGHSFGQRLNLPVPVSEFPKKKVSCVQLRLN 111

Query: 491 PSHSAPGTPWESFWKHPLDLNLAS 562
           PS +   T W +  K PL  +LAS
Sbjct: 112 PSPTFDSTVWVTLRKLPLGYSLAS 135


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,889,683
Number of Sequences: 219361
Number of extensions: 2470306
Number of successful extensions: 6303
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6302
length of database: 80,573,946
effective HSP length: 110
effective length of database: 56,444,236
effective search space used: 7902193040
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)