>STA13_MOUSE (Q923Q2) StAR-related lipid transfer protein 13 (StARD13) (START|
           domain-containing protein 13)
          Length = 1113

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 20/95 (21%)
 Frame = +3

Query: 444 LLTRPSCQTQREGTSLMFYLCVPWGHLPRQNPAACR---------------TRTCSTVSS 578
           +++RP  Q + E    M  + +P G L    PAACR                   STVS+
Sbjct: 285 VISRPVLQQEPESFKTMQCVQIPNGDLQTSPPAACRKGLPCSSKSSGESSPLENSSTVST 344

Query: 579 *CQPHQRCSPCAPQLSG-----TPGVAGRSFPNTS 668
            C   ++C   A +  G        +AG + P+TS
Sbjct: 345 PCMKERKCHHEANKRGGMYLEDLDVLAGTALPDTS 379

>ENO_SYNPX (Q7U3T1) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)|
           (2-phospho-D-glycerate hydro-lyase)
          Length = 430

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 24/54 (44%), Positives = 34/54 (62%)
 Frame = -2

Query: 423 VNQVDAVVNEAFKMANADDGKAVDEAEFKKLLTEILGAVMLQLDGNAIAVSTNT 262
           V Q++ +V E F + + +DG A D+ E  KLLTE LG   +QL G+ + V TNT
Sbjct: 270 VGQLEQLV-EKFPIVSIEDGLAEDDWEGWKLLTERLGG-KVQLVGDDLFV-TNT 320

>POLG_HCVT5 (O92529) Genome polyprotein [Contains: Core protein p21 (Capsid|
            protein C) (p21); Core protein p19; Envelope glycoprotein
            E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68)
            (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine
            protease/N
          Length = 3018

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
 Frame = -2

Query: 675  EFKKYLGTIARRL----QECPIIVAHTENTFDGAGIRKILSNKFEFDKLLDSVWEDVPKE 508
            E K    T+  RL    + C +   H+  +  G G R + S+  +  K +DSVWED+ ++
Sbjct: 2497 EIKLRASTVHARLLSTEEACSLTPPHSARSRYGYGARDVRSHTSKAVKHIDSVWEDLLED 2556

Query: 507  H 505
            +
Sbjct: 2557 N 2557

>VHSJ_LAMBD (P03749) Host specificity protein J|
          Length = 1132

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
 Frame = -2

Query: 495 TSKKYLRVAFDKMAASVNLPP----YGAVNQVDAVVNEAFKMANADDGKAVDEAE----- 343
           TS +YL  A   +AAS+N+ P    Y  +  V+ V   AF  A    G+A D+AE     
Sbjct: 761 TSTRYLGTALYWIAASINIKPGHDYYFYIRSVNTVGKSAFVEA---VGRASDDAEGYLDF 817

Query: 342 FKKLLTEI-LGAVMLQ 298
           FK  +TE  LG  +L+
Sbjct: 818 FKGKITESHLGKELLE 833

>FPG_SYNEN (P95744) Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)|
           (FAPY-DNA glycosylase) (DNA-(apurinic or apyrimidinic
           site) lyase mutM) (EC 4.2.99.18) (AP lyase mutM)
          Length = 283

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +3

Query: 258 GRCWWRPRSRCRLTEASPPL 317
           GRCWW P   CR+ EA P L
Sbjct: 115 GRCWWLPPD-CRVAEAIPAL 133

>FPG_SYNEL (P59065) Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)|
           (FAPY-DNA glycosylase) (DNA-(apurinic or apyrimidinic
           site) lyase mutM) (EC 4.2.99.18) (AP lyase mutM)
          Length = 283

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +3

Query: 258 GRCWWRPRSRCRLTEASPPL 317
           GRCWW P   CR+ EA P L
Sbjct: 115 GRCWWLPPD-CRVAEAIPAL 133

>ENGA_CLOTE (Q895X8) GTP-binding protein engA|
          Length = 438

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 14/50 (28%), Positives = 27/50 (54%)
 Frame = -2

Query: 543 LLDSVWEDVPKEHKDRTSKKYLRVAFDKMAASVNLPPYGAVNQVDAVVNE 394
           +LD + E+ PK ++D    +Y+R+AF      V  P  G  + ++ ++ E
Sbjct: 156 MLDKIVENFPKGYQDEEEDEYIRIAF------VGKPNVGKSSLINKILGE 199

>EAE_CITFR (Q07591) Intimin (Attaching and effacing protein) (Eae protein)|
          Length = 936

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 9/62 (14%)
 Frame = -2

Query: 432 YGAVNQVDAVVNE----AFKMANADDGKAVDEAEFKKLLTEILGAVM-----LQLDGNAI 280
           +G +N+ +A  ++      K+++   GKA+  A+  ++ TE+  A +     L +DGN +
Sbjct: 699 FGTLNKTEATTDQNGYATVKLSSGTPGKAIVSAKVSEVNTEVKAATVEFFAPLSIDGNKV 758

Query: 279 AV 274
            V
Sbjct: 759 TV 760


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,835,806
Number of Sequences: 219361
Number of extensions: 1281318
Number of successful extensions: 3811
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3802
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6598423128
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)