Clone Name | rbasd27i12 |
---|---|
Clone Library Name | barley_pub |
>GSTT2_DROME (Q9VG98) Glutathione S-transferase D2 (EC 2.5.1.18) (DmGST21)| Length = 215 Score = 33.1 bits (74), Expect = 0.17 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 5/58 (8%) Frame = +3 Query: 93 MLNTTEGSLLQPQIVKRDTDR*IDRLSFSGHYEWAGR-----LISSHSSSDQILPAHP 251 +LNT EG L+P+ VK + I L +G W R L+ + D +LP P Sbjct: 30 LLNTMEGEQLKPEFVKLNPQHTIPTLVDNGFSIWESRAIAVYLVEKYGKDDYLLPNDP 87
>GSTT5_DROME (Q9VG95) Glutathione S-transferase D5 (EC 2.5.1.18) (DmGST24)| Length = 216 Score = 30.0 bits (66), Expect = 1.4 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 5/61 (8%) Frame = +3 Query: 93 MLNTTEGSLLQPQIVKRDTDR*IDRLSFSGHYEWAGR-----LISSHSSSDQILPAHPSG 257 +LNT E L+P+ VK + I L +G W R L+ + D + P P Sbjct: 30 LLNTLEKDQLKPEFVKLNPQHTIPTLVDNGFSIWESRAIAVYLVEKYGKDDTLFPKDPKK 89 Query: 258 Q 260 Q Sbjct: 90 Q 90
>COHA1_CHICK (Q90584) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen| 2) (180 kDa bullous pemphigoid antigen 2) (Fragment) Length = 1146 Score = 28.5 bits (62), Expect = 4.2 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = +3 Query: 198 GRLISSHSSSDQILPAHPSGQPWPSAPSGP 287 G++IS+ SS LP P G P P P+GP Sbjct: 389 GKVISAEGSSTIALPG-PPGPPGPIGPTGP 417
>Y022_THEAC (Q9HM47) UPF0204 protein Ta0022| Length = 256 Score = 28.5 bits (62), Expect = 4.2 Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%) Frame = +3 Query: 168 LSFSGHYEWAGRLISSHSSSDQI--LPAHPSGQPWPSAPSG 284 +S SG Y++ ++S HSS+ + L AHP+G PSA G Sbjct: 52 MSLSGKYDYLV-VLSRHSSAADVKSLTAHPTGNFGPSADLG 91
>YSO2_CAEEL (Q10128) Hypothetical protein F56D1.2 precursor| Length = 718 Score = 28.1 bits (61), Expect = 5.5 Identities = 19/51 (37%), Positives = 24/51 (47%) Frame = +2 Query: 62 RFQQPTATMHNAQHN*R*SVTTTDSEARHR*VDR*IIIFWALRMGRQTHFF 214 +F Q TA +HN +H R +VT SEA+ I W L R FF Sbjct: 558 QFAQLTAFLHNVEHTERANVTQNISEAQ--------IHEWNLCASRMMSFF 600
>CI010_HUMAN (Q9NZB2) Protein C9orf10| Length = 1069 Score = 28.1 bits (61), Expect = 5.5 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +2 Query: 185 LRMGRQTHFFPLFFRPDPPSAPFWPALA 268 L RQ+H P P PP+ PF+PA A Sbjct: 846 LSFSRQSHTLPF---PPPPALPFYPASA 870
>CCRK_RAT (Q4KM34) Cell cycle-related kinase (EC 2.7.11.22)| Length = 346 Score = 27.7 bits (60), Expect = 7.1 Identities = 11/17 (64%), Positives = 11/17 (64%) Frame = +3 Query: 237 LPAHPSGQPWPSAPSGP 287 LPAHPS P P P GP Sbjct: 293 LPAHPSELPIPQRPGGP 309
>CCRK_MOUSE (Q9JHU3) Cell cycle-related kinase (EC 2.7.11.22)| (Cyclin-kinase-activating kinase p42) (CDK-activating kinase p42) (CAK-kinase p42) (CDK-related protein kinase PNQLARE) Length = 346 Score = 27.7 bits (60), Expect = 7.1 Identities = 11/17 (64%), Positives = 11/17 (64%) Frame = +3 Query: 237 LPAHPSGQPWPSAPSGP 287 LPAHPS P P P GP Sbjct: 293 LPAHPSELPIPQRPGGP 309
>DIP2A_MOUSE (Q8BWT5) Disco-interacting protein 2 homolog A| Length = 1523 Score = 27.3 bits (59), Expect = 9.3 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Frame = +3 Query: 171 SFSGHYEWAGRLI--SSHSSSDQILPAHPSGQPWPSAPSGPFA 293 S SG W R+I SS SSS +HP G+P +APS A Sbjct: 119 SHSGIEPWLDRVIQGSSTSSSASSTSSHPGGRP-AAAPSASTA 160
>EP400_MOUSE (Q8CHI8) E1A-binding protein p400 (EC 3.6.1.-) (p400 kDa| SWI2/SNF2-related protein) (Domino homolog) (mDomino) Length = 3072 Score = 27.3 bits (59), Expect = 9.3 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +3 Query: 213 SHSSSDQILPAHPSGQPWPSAPSGPFA 293 S + S++ PAHP+ P P+AP P A Sbjct: 19 SFTGSEEEQPAHPNLPPSPAAPFAPSA 45
>GSTT4_DROME (Q9VG96) Glutathione S-transferase D4 (EC 2.5.1.18) (DmGST23)| Length = 215 Score = 27.3 bits (59), Expect = 9.3 Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 5/57 (8%) Frame = +3 Query: 96 LNTTEGSLLQPQIVKRDTDR*IDRLSFSGHYEWAGR-----LISSHSSSDQILPAHP 251 L TEG L+P+ +K + I L +G W R L+ + D + P P Sbjct: 31 LRITEGEHLKPEFLKLNPQHTIPTLVDNGFAIWESRAIAVYLVEKYGKDDSLFPNDP 87 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,790,317 Number of Sequences: 219361 Number of extensions: 681758 Number of successful extensions: 2418 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 2110 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2403 length of database: 80,573,946 effective HSP length: 98 effective length of database: 59,076,568 effective search space used: 1417837632 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)