>NCOA2_MOUSE (Q61026) Nuclear receptor coactivator 2 (NCoA-2) (Transcriptional|
            intermediary factor 2) (Glucocorticoid
            receptor-interacting protein 1) (GRIP-1)
          Length = 1462

 Score = 34.3 bits (77), Expect = 0.35
 Identities = 32/113 (28%), Positives = 51/113 (45%)
 Frame = -3

Query: 561  NQPWSRLPPAPVRNNMNYLAAKEQIPRGGAPDIAEKLSQLSMSSTTNRAPIMPSDRFVDL 382
            + P+S +P   +  N   L ++  +       I    S+ SM S    AP  P+ R V  
Sbjct: 908  SSPYSVIPQPGMMGNQGMLGSQGNLGNNSTGMIGSSTSRPSMPSG-EWAPQSPAVR-VTC 965

Query: 381  KATTRAHGEPVRRPVPLGPRDTWHARNDPFRRTYEMPGERALLQRKLVS*GPS 223
             ATT A   PV+  +   P       + P R   + PG+R +LQ ++++ GPS
Sbjct: 966  AATTGAMNRPVQGGMIRNP-----TASIPMRANSQ-PGQRQMLQSQVMNIGPS 1012

>FAK1_XENLA (Q91738) Focal adhesion kinase 1 (EC 2.7.10.2) (FADK 1) (pp125FAK)|
          Length = 1068

 Score = 33.9 bits (76), Expect = 0.46
 Identities = 31/119 (26%), Positives = 48/119 (40%), Gaps = 5/119 (4%)
 Frame = -2

Query: 595  QP*ADDEGERNEPALVQTTSSTSEEQHELPCRQGADPSW-WRARHSREAVPAVDVLHHKP 419
            QP  +D G  +  +L Q   +   E+  +  +Q  +    W  +  R   P  DV   + 
Sbjct: 798  QPSMEDSGPMDMRSLAQVLPTHLMEERLIRQQQEMEEDQRWLEKEERFLKP--DVRLSRG 855

Query: 418  GADHAFRQVCGPEGHYQSPRGAREAARASGTQGHVACPKRP----LPAHL*DAGREGSP 254
              DH        +G+ Q P G +   +  G   HVA PK+P     P+HL +     SP
Sbjct: 856  SVDHV-------DGNIQCPAGNQHIYQPVGKPDHVAPPKKPPRPGAPSHLGNLPAHNSP 907

>NCOA2_RAT (Q9WUI9) Nuclear receptor coactivator 2 (NCoA-2) (Transcriptional|
            intermediary factor 2)
          Length = 1465

 Score = 33.9 bits (76), Expect = 0.46
 Identities = 31/113 (27%), Positives = 51/113 (45%)
 Frame = -3

Query: 561  NQPWSRLPPAPVRNNMNYLAAKEQIPRGGAPDIAEKLSQLSMSSTTNRAPIMPSDRFVDL 382
            + P+S +P   +  N   L ++  +       I    S+ SM S    AP  P+ R V  
Sbjct: 908  SSPYSVIPQPGMMGNQGMLGSQGNLGNNSTGMIGSSTSRSSMPSG-EWAPQSPAVR-VTC 965

Query: 381  KATTRAHGEPVRRPVPLGPRDTWHARNDPFRRTYEMPGERALLQRKLVS*GPS 223
             ATT A   P++  +   P       + P R   + PG+R +LQ ++++ GPS
Sbjct: 966  AATTGAMNRPIQGGMIRNP-----TASIPMRANSQ-PGQRQMLQPQVMNIGPS 1012

>SAHH2_MOUSE (Q80SW1) Putative adenosylhomocysteinase 2 (EC 3.3.1.1)|
           (S-adenosyl-L-homocysteine hydrolase 2) (AdoHcyase 2)
           (S-adenosylhomocysteine hydrolase-like 1) (IP3R-binding
           protein released with inositol 1,4,5-trisphosphate)
          Length = 530

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
 Frame = +2

Query: 116 AATARKEIAGLLWSG-----WWWWCR*CEEADGWQKGGRRWDGPQLTSFLWRR 259
           AA A   +A   W G     +WW    C   DGWQ      DG  LT +++++
Sbjct: 188 AALAEAGVAVFAWKGESEDDFWWCIDRCVNMDGWQANMILDDGGDLTHWVYKK 240

>SAHH2_HUMAN (O43865) Putative adenosylhomocysteinase 2 (EC 3.3.1.1)|
           (S-adenosyl-L-homocysteine hydrolase 2) (AdoHcyase 2)
           (S-adenosylhomocysteine hydrolase-like 1) (DC-expressed
           AHCY-like molecule)
          Length = 530

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
 Frame = +2

Query: 116 AATARKEIAGLLWSG-----WWWWCR*CEEADGWQKGGRRWDGPQLTSFLWRR 259
           AA A   +A   W G     +WW    C   DGWQ      DG  LT +++++
Sbjct: 188 AALAEAGVAVFAWKGESEDDFWWCIDRCVNMDGWQANMILDDGGDLTHWVYKK 240

>CBIJ_METTH (O27083) Probable cobalt-precorrin-6A reductase (EC 1.3.1.-)|
          Length = 302

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 14/81 (17%)
 Frame = +2

Query: 245 FLWRR-ALSPGIS*VRRKGSFR-----ACHVSLGP----RGTGRLTGSPWALVVAFRST- 391
           +LWRR  ++PG   V+RKGS R     +  V  G     R   RL+G PW  V A  +T 
Sbjct: 13  YLWRRKTMNPGDKGVKRKGSDRQREKMSVIVMAGTEDARRIISRLSGMPWVEVTATATTE 72

Query: 392 ---NLSEGMIGARFVVEDIDS 445
              +L+E    +R V   +DS
Sbjct: 73  HGSDLAEKSGASRTVTGALDS 93

>GPR62_HUMAN (Q9BZJ7) Probable G-protein coupled receptor 62 (hGPCR8)|
          Length = 368

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 32/92 (34%), Positives = 35/92 (38%)
 Frame = +3

Query: 357 PRGLW*WPSGPQTCRKA*SAPGLWWRTSTAGTASRLCLARHHEGSAPWRQGXXXXXXLVL 536
           P GL     GP  CR A           T G A+ L LAR+     P R G      LVL
Sbjct: 75  PPGLGRVRLGPAPCRAARFLSAALLPACTLGVAA-LGLARYRLIVHPLRPGSRPPPVLVL 133

Query: 537 EVVWTKAGSLRSPSSSAYGCPLVSPDDPTLAS 632
             VW  AG L   + S  G P   P  P   S
Sbjct: 134 TAVWAAAGLL--GALSLLGPPPAPPPAPARCS 163

>WEB1_YEAST (P38968) Protein WEB1 (Protein transport protein SEC31)|
          Length = 1273

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = -3

Query: 594  NHKLTTKENAMNQPWSRLPPAPVRNNMNYLAAKEQIPRGGA---PDIAEKLSQLSMS 433
            NH +T+     N+P +  PP  ++   N LA+ EQ P  GA   P ++   S L  S
Sbjct: 1090 NHTMTSPPPVFNKPPTGPPPISMKKRSNKLASIEQNPSQGATYPPTLSSSASPLQPS 1146

>TCF20_MOUSE (Q9EPQ8) Transcription factor 20 (Stromelysin 1 PDGF-responsive|
           element-binding protein) (SPRE-binding protein) (Nuclear
           factor SPBP)
          Length = 1983

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 20/59 (33%), Positives = 25/59 (42%)
 Frame = -1

Query: 380 RPLPEPTGSP*GGPCLWDPGTRGMPETTPSGAPMRCRARGLSSKGSSSAEDHPTDARPS 204
           +PLP+ TG P  G     P  R  P T PS A  + R         SSA    + + PS
Sbjct: 205 QPLPQTTGQPASGSSHLQPMQR--PSTLPSSAGYQLRVGQFGQHYQSSASSSSSSSFPS 261

>VPRA_DENPO (P25687) Intestinal toxin 1 (Mamba intestinal toxin 1) (MIT 1)|
           (MIT1) (Venom protein A)
          Length = 81

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +3

Query: 255 GEPSRPASHRCAGRGRFGHATCPWVPEARAASRAPR 362
           GE   PASH+    G+  H TCP  P       +P+
Sbjct: 38  GEDCHPASHKIPFSGQRMHHTCPCAPNLACVQTSPK 73

>K1949_MOUSE (Q8BQ30) Protein KIAA1949 homolog|
          Length = 594

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 24/84 (28%), Positives = 32/84 (38%), Gaps = 4/84 (4%)
 Frame = -2

Query: 442 VDVLHHKPGADHAFRQVCGPEGHYQSPRGAREAARASG----TQGHVACPKRPLPAHL*D 275
           +D    KP    +  +  GP G        +E A A       Q ++     PLP     
Sbjct: 330 IDTQTQKPDPPASSEKHPGPSGMEAEEEAEKEEAEAQSRPLRAQQNLCSGPSPLPPE--H 387

Query: 274 AGREGSPPKEARQLRTIPPTPALL 203
           +G EGS  +E       PPTPA L
Sbjct: 388 SGTEGSRQQEEEAAEPRPPTPAPL 411

>DPOG2_HUMAN (Q9UHN1) DNA polymerase gamma subunit 2, mitochondrial precursor|
           (EC 2.7.7.7) (Mitochondrial DNA polymerase accessory
           subunit) (PolG-beta) (MtPolB) (DNA polymerase gamma
           accessory 55 kDa subunit) (p55)
          Length = 485

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
 Frame = -2

Query: 502 RQGADPSWWRARHS-REAVPAVDVLHHKPG----ADHAFRQV 392
           R+     WW +    RE V  VD LHHKPG     D AFR V
Sbjct: 107 RKNLAAEWWTSVVVFREQVFPVDALHHKPGPLLPGDSAFRLV 148

>IP3KC_HUMAN (Q96DU7) Inositol-trisphosphate 3-kinase C (EC 2.7.1.127) (Inositol|
           1,4,5-trisphosphate 3-kinase C) (InsP 3-kinase C)
           (IP3K-C)
          Length = 683

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 22/56 (39%), Positives = 25/56 (44%)
 Frame = +1

Query: 211 RASVGWSSADELPLEESPLARHLIGAPEGVVSGMPRVPGSQRHGPPHGLPVGSGSG 378
           R S+  + A  LP      AR  + AP G   G  R PG QR GP  G P G   G
Sbjct: 7   RGSLNEAEAGALPAA----ARMGLEAPRG---GRRRQPGQQRPGPGAGAPAGRPEG 55

>RAD52_EMENI (Q96UP6) DNA repair and recombination protein radC (RAD52 homolog)|
          Length = 582

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = -2

Query: 385 PEGHYQSPRGAREAARASGTQGHVACPKRP-LPAHL*DAGREGSPPKEARQLRTIPP 218
           P  H   P+ A   A+ASG Q HV  P +P  P +L  AGR+   P +A   R  PP
Sbjct: 271 PNAHLNLPKHAL-GAQASGNQ-HVVTPSKPERPMNLAPAGRQ--IPNQALNNRPFPP 323

>GATC_DROME (P91623) GATA-binding factor-C (Transcription factor GATA-C)|
           (dGATA-C) (Protein grain)
          Length = 486

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 26/91 (28%), Positives = 35/91 (38%), Gaps = 6/91 (6%)
 Frame = -2

Query: 466 HSREAVPAVDVLHHKPGADHAFRQVCGPEGHYQ-SPRGARE----AARASGTQGHVACPK 302
           H R   P+      +  + HA  QVC P  H   SP    E    A  ++ + G  ACP+
Sbjct: 96  HHRRYYPSYHQHTSRMPSTHASPQVCRPHFHTPLSPWLTSEHKSFAPASAWSMGQFACPQ 155

Query: 301 RPLPAH-L*DAGREGSPPKEARQLRTIPPTP 212
            P   H L   G+        +     PPTP
Sbjct: 156 EPQVEHKLGQMGQSHQTTAAGQHSFPFPPTP 186

>MMP9_RABIT (P41246) Matrix metalloproteinase-9 precursor (EC 3.4.24.35)|
           (MMP-9) (92 kDa type IV collagenase) (92 kDa gelatinase)
           (Gelatinase B) (GELB)
          Length = 707

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 19/47 (40%), Positives = 21/47 (44%)
 Frame = -1

Query: 422 TGRRSCLPTGLWT*RPLPEPTGSP*GGPCLWDPGTRGMPETTPSGAP 282
           T   +  PT   T RP   PT SP G P     G  G P  +PS AP
Sbjct: 462 TAPPTACPTWPATVRPSEHPTTSPTGAP---SAGPTGPPTASPSAAP 505

>CV106_HUMAN (Q6P0N0) Protein C14orf106 (P243)|
          Length = 1132

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 23/93 (24%), Positives = 30/93 (32%), Gaps = 2/93 (2%)
 Frame = -2

Query: 574  GERNEPALVQTTSSTSEEQHELPCRQGA--DPSWWRARHSREAVPAVDVLHHKPGADHAF 401
            G R E  + +   S    +H L C  G   D  W      +       +  HKPG     
Sbjct: 847  GVRKEFPITEAVGSDKTNRHPLECLPGLIQDKEWNEKELQKLHCAFASLPKHKPGFWSEV 906

Query: 400  RQVCGPEGHYQSPRGAREAARASGTQGHVACPK 302
                G     +  R   E  R  G+Q HV   K
Sbjct: 907  AAAVGSRSPEECQRKYMENPRGKGSQKHVTKKK 939

>RECO_GEOSL (Q74FM9) DNA repair protein recO (Recombination protein O)|
          Length = 243

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 26/75 (34%), Positives = 27/75 (36%), Gaps = 4/75 (5%)
 Frame = +3

Query: 132 RRSPDYCXXXXXXXVDDAKRQMDGRRAGVGGMVLS*RASFGGEPSRPAS----HRCAGRG 299
           R S D C         DA      RRAG  G VL       G P    +    HRC G G
Sbjct: 147 RLSLDACAACGVEFPADA-----ARRAGAAGTVLCTGCGRYGAPLSAETVRLLHRCLGTG 201

Query: 300 RFGHATCPWVPEARA 344
           RFG    P  P   A
Sbjct: 202 RFGAIVFPPEPLGEA 216

>DOA_DROME (P49762) Serine/threonine-protein kinase Doa (EC 2.7.12.1) (Protein|
           darkener of apricot)
          Length = 832

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
 Frame = -3

Query: 588 KLTTKENAMNQPWSRLPPAPVRNNMNYLAAKEQ----IPRGGAP 469
           K T KEN   QP  + PP  +     Y A ++Q     PR GAP
Sbjct: 225 KNTNKENKFGQPMQQQPPGMMPQMYGYQAPQQQSKIGYPRTGAP 268

>NCOA2_HUMAN (Q15596) Nuclear receptor coactivator 2 (NCoA-2) (Transcriptional|
            intermediary factor 2)
          Length = 1464

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 33/126 (26%), Positives = 50/126 (39%), Gaps = 12/126 (9%)
 Frame = -3

Query: 564  MNQPWSRLPPAPVRNNMNYLAAKEQIPRGGAPDIAEK----LSQLSMSSTTNRAPIMPSD 397
            +  P    P  P+RN+  Y    +    G    I  +     S   M   +   P MPS 
Sbjct: 893  LQSPTGAGPFPPIRNSSPYSVIPQPGMMGNQGMIGNQGNLGNSSTGMIGNSASRPTMPSG 952

Query: 396  RF--------VDLKATTRAHGEPVRRPVPLGPRDTWHARNDPFRRTYEMPGERALLQRKL 241
             +        V   ATT A   PV+  +   P     A + P R + + PG+R  LQ ++
Sbjct: 953  EWAPQSSAVRVTCAATTSAMNRPVQGGMIRNP-----AASIPMRPSSQ-PGQRQTLQSQV 1006

Query: 240  VS*GPS 223
            ++ GPS
Sbjct: 1007 MNIGPS 1012

>CSKI1_MOUSE (Q6P9K8) Caskin-1 (CASK-interacting protein 1)|
          Length = 1431

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
 Frame = -3

Query: 666  PTAPARAAGVQRKLELDHQVK-PEGNHKLTTKENAMN-QPWSRLPPAPVRNNMNYLAAKE 493
            P A    A VQR++   H V+ P G  K   +  +   +P  + PP P     +   A  
Sbjct: 903  PAAAGPYATVQRRVGRSHSVRAPAGTDKNVNRSQSFAVRPRKKGPPPPPPKRSSSAMASA 962

Query: 492  QIPRGGAPDIAEKLSQLSMSSTTNRA 415
             +    APD+  +  +L + +   RA
Sbjct: 963  NLADEPAPDVEAEDGRLGVRAQRRRA 988

>GRB10_MOUSE (Q60760) Growth factor receptor-bound protein 10 (GRB10 adaptor|
           protein)
          Length = 621

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 17/60 (28%), Positives = 24/60 (40%)
 Frame = +3

Query: 261 PSRPASHRCAGRGRFGHATCPWVPEARAASRAPRGLW*WPSGPQTCRKA*SAPGLWWRTS 440
           PS+P +  C GR         W+P         R +W W   P       + PGLW +T+
Sbjct: 109 PSQPPAKHC-GRCE------KWIPGENTRGNGKRKIWRWQFPPGFQLSKLTRPGLWTKTT 161

>SYI_THIDA (Q3SHS3) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 929

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 27/88 (30%), Positives = 34/88 (38%), Gaps = 12/88 (13%)
 Frame = +1

Query: 325 GSQRHGPPHGLP---VGSGSGLQVHKPVGRHDRRPVCXXXXXXXXXXXXYVWRA------ 477
           G+    P HGL    VGS  GL+V  PVG   R                 +W+A      
Sbjct: 328 GAVHTAPGHGLDDYVVGSRYGLKVDNPVGDDGR-----FYASVPLVGGMSIWQANPLIVE 382

Query: 478 ---TTRDLLLGGKVVHVVPHWCWR*SGP 552
               +  LL   K++H  PH CWR   P
Sbjct: 383 TLEASGALLAHEKLLHSYPH-CWRHKTP 409

>BRD3_HUMAN (Q15059) Bromodomain-containing protein 3 (RING3-like protein)|
          Length = 726

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -1

Query: 326 PGTRGMPETTPSGAPMRCRARGLSSKGSSSAEDHPTDARPS 204
           P  +  P + PSG P R  +   S  GSSS+    +D+  S
Sbjct: 685 PARKEKPGSAPSGGPSRLSSSSSSESGSSSSSGSSSDSSDS 725

>URB1_USTMA (P40349) Siderophore biosynthesis regulatory protein URBS1|
          Length = 950

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
 Frame = -1

Query: 365  PTGSP*GGPCLWDPGTR----GMPETTPSGAPMRCRARGLSSKGSSSAEDHPTDARPSA 201
            PTGS  G P     GTR     + +  P  AP R +A   S+  SSS +D      PSA
Sbjct: 862  PTGSAQGSPGADARGTRSGHDSIKQEAPDAAPRRSKA--FSNSSSSSEKDELESPPPSA 918


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,682,414
Number of Sequences: 219361
Number of extensions: 2655288
Number of successful extensions: 8904
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 8113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8878
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6541540170
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)