ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd27h18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_464006.1| Oryza sativa (japonica cultivar-group), mRNA 278 2e-71
2dbj|AK069931.1| Oryza sativa (japonica cultivar-group) cDNA clon... 270 6e-69
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 204 3e-49
4dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic D... 204 3e-49
5emb|AL365179.30| Human DNA sequence from clone RP13-34C21 on chr... 42 2.4
6gb|AF461538.1| Clostridium botulinum strain 62A putative flagell... 42 2.4
7gb|AC104120.2| Homo sapiens chromosome 5 clone RP11-404L6, compl... 42 2.4
8ref|XM_628967.1| Dictyostelium discoideum hypothetical protein (... 40 9.6
9ref|XM_323031.1| Neurospora crassa OR74A related to 2''-O-ribosy... 40 9.6
10ref|XM_956413.1| Neurospora crassa OR74A related to 2''-O-ribosy... 40 9.6
11gb|AC113201.15| Mus musculus chromosome 6, clone RP23-271G7, com... 40 9.6
12gb|BC088769.1| Xenopus tropicalis chymotrypsin-like, mRNA (cDNA ... 40 9.6
13gb|AC121290.6| Mus musculus chromosome 16, clone RP23-84N4, comp... 40 9.6
14gb|AC165174.2| Zea mays clone ZMMBBb-127F19, complete sequence 40 9.6
15gb|AC121923.3| Mus musculus BAC clone RP24-198O18 from chromosom... 40 9.6
16emb|CR759765.6| Zebrafish DNA sequence from clone DKEY-1F12 in l... 40 9.6
17ref|NM_001008776.1| Rattus norvegicus similar to serine proteina... 40 9.6
18gb|BC111708.1| Rattus norvegicus similar to serine proteinase in... 40 9.6
19emb|AL356099.15| Human DNA sequence from clone RP11-357A18 on ch... 40 9.6
20gb|AY325135.1| Rattus norvegicus Ab1-046 mRNA, complete cds 40 9.6
21emb|AL021406.1|HS997K18 Human DNA sequence from clone RP5-997K18... 40 9.6
22ref|NM_001011477.1| Xenopus tropicalis chymotrypsin-like (ctrl),... 40 9.6
23gb|AC117379.3| Homo sapiens 3 BAC RP11-392C7 (Roswell Park Cance... 40 9.6
24gb|AC026391.7| Homo sapiens chromosome 10 clone RP11-135D11, com... 40 9.6
25gb|AC154909.4| Mus musculus BAC clone RP23-185B22 from chromosom... 40 9.6
26gb|AC160211.1| Genomic seqeunce for Zea mays BAC clone ZMMBBb044... 40 9.6
27gb|AC084149.5| Homo sapiens BAC clone RP11-221F12 from 2, comple... 40 9.6
28gb|AC011489.6|AC011489 Homo sapiens chromosome 19 clone CTB-179K... 40 9.6
29gb|AC153975.4| Mus musculus 10 BAC RP24-186L12 (Roswell Park Can... 40 9.6
30emb|BX537302.12| Mouse DNA sequence from clone RP23-349I9 on chr... 40 9.6
31gb|AC157776.1| Zea mays chromosome 8 BAC clone ZMMBBb0483G05, co... 40 9.6
32gb|AC157487.1| Genomic sequence for Zea mays clone ZMMBBb0614J24... 40 9.6
33gb|AC148600.2| Xenopus tropicalis clone CH216-62H10, complete se... 40 9.6
34gb|AF037338.1|AF037338 Homo sapiens cleft lip and palate transme... 40 9.6
35emb|AL513467.1|NC17E5 Neurospora crassa DNA linkage group V Cosm... 40 9.6
36dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome 40 9.6
37emb|AL731840.17| Mouse DNA sequence from clone RP23-52C15 on chr... 40 9.6

>ref|XM_464006.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2195

 Score =  278 bits (140), Expect = 2e-71
 Identities = 245/280 (87%)
 Strand = Plus / Minus

                                                                        
Query: 409  ctaggacaccttgtgcgagatttttatgtagttcatgagccttctcagagcattaccgct 468
            ||||||||| |||||||||||||||||||| ||||||||||| ||||| || ||||||||
Sbjct: 1819 ctaggacactttgtgcgagatttttatgtaattcatgagcctgctcagggctttaccgct 1760

                                                                        
Query: 469  gtcgatggcttcccttgccctgtcaagcgcggagttgatatcctgagctccactgcagcc 528
            ||| |||||||| |||||||||||||| ||||| |||||||||| ||||||| |||||||
Sbjct: 1759 gtcaatggcttctcttgccctgtcaagtgcggacttgatatcctcagctccagtgcagcc 1700

                                                                        
Query: 529  taacaagtggtcagccatagcggcgttaagaactattcggtcataagcgggccctttgtc 588
            ||| | ||||||| |||| || || || || ||||||| |||||| || || ||||| ||
Sbjct: 1699 taagaggtggtcaaccatggcagcatttaggactattctgtcataggctggtcctttctc 1640

                                                                        
Query: 589  tccacccagtgctgacaaacccagctccaagtttttcagtactgatttatcagttcttgg 648
             |||| ||| |||| |||||||| ||||||||||||||| |||||| ||||||||| |||
Sbjct: 1639 cccactcagcgctgccaaacccaactccaagtttttcaggactgatctatcagttcgtgg 1580

                                                    
Query: 649  agtttcagtggatttgaaaccaagttcctgagcattcaca 688
            ||| ||||||||||  ||||||||||||||||||||||||
Sbjct: 1579 agtctcagtggattcaaaaccaagttcctgagcattcaca 1540



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 130  ttaatttattgacaaggcct 149
            ||||||||||||||||||||
Sbjct: 1977 ttaatttattgacaaggcct 1958



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>dbj|AK069931.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035J06, full
            insert sequence
          Length = 2195

 Score =  270 bits (136), Expect = 6e-69
 Identities = 244/280 (87%)
 Strand = Plus / Minus

                                                                        
Query: 409  ctaggacaccttgtgcgagatttttatgtagttcatgagccttctcagagcattaccgct 468
            ||||||||| |||||||||||||||||||| ||||||||||| ||||| || ||||||||
Sbjct: 1819 ctaggacactttgtgcgagatttttatgtaattcatgagcctgctcagggctttaccgct 1760

                                                                        
Query: 469  gtcgatggcttcccttgccctgtcaagcgcggagttgatatcctgagctccactgcagcc 528
            ||| |||||||| |||||||||||||| ||||| |||||||||| ||||||| |||||||
Sbjct: 1759 gtcaatggcttctcttgccctgtcaagtgcggacttgatatcctcagctccagtgcagcc 1700

                                                                        
Query: 529  taacaagtggtcagccatagcggcgttaagaactattcggtcataagcgggccctttgtc 588
            ||| | ||||||| |||| || || || || ||||||| |||||| || || ||||| ||
Sbjct: 1699 taagaggtggtcaaccatggcagcatttaggactattctgtcataggctggtcctttctc 1640

                                                                        
Query: 589  tccacccagtgctgacaaacccagctccaagtttttcagtactgatttatcagttcttgg 648
             |||| ||| |||| |||||||| ||||||||||||||| |||||| ||||||||| |||
Sbjct: 1639 cccactcagcgctgccaaacccaactccaagtttttcaggactgatctatcagttcgtgg 1580

                                                    
Query: 649  agtttcagtggatttgaaaccaagttcctgagcattcaca 688
            ||| ||||| ||||  ||||||||||||||||||||||||
Sbjct: 1579 agtctcagtagattcaaaaccaagttcctgagcattcaca 1540



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 130  ttaatttattgacaaggcct 149
            ||||||||||||||||||||
Sbjct: 1977 ttaatttattgacaaggcct 1958



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  204 bits (103), Expect = 3e-49
 Identities = 190/219 (86%)
 Strand = Plus / Plus

                                                                           
Query: 409     ctaggacaccttgtgcgagatttttatgtagttcatgagccttctcagagcattaccgct 468
               ||||||||| |||||||||||||||||||| ||||||||||| ||||| || ||||||||
Sbjct: 1632425 ctaggacactttgtgcgagatttttatgtaattcatgagcctgctcagggctttaccgct 1632484

                                                                           
Query: 469     gtcgatggcttcccttgccctgtcaagcgcggagttgatatcctgagctccactgcagcc 528
               ||| |||||||| |||||||||||||| ||||| |||||||||| ||||||| |||||||
Sbjct: 1632485 gtcaatggcttctcttgccctgtcaagtgcggacttgatatcctcagctccagtgcagcc 1632544

                                                                           
Query: 529     taacaagtggtcagccatagcggcgttaagaactattcggtcataagcgggccctttgtc 588
               ||| | ||||||| |||| || || || || ||||||| |||||| || || ||||| ||
Sbjct: 1632545 taagaggtggtcaaccatggcagcatttaggactattctgtcataggctggtcctttctc 1632604

                                                      
Query: 589     tccacccagtgctgacaaacccagctccaagtttttcag 627
                |||| ||| |||| |||||||| |||||||||||||||
Sbjct: 1632605 cccactcagcgctgccaaacccaactccaagtttttcag 1632643



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 56/61 (91%)
 Strand = Plus / Plus

                                                                           
Query: 628     tactgatttatcagttcttggagtttcagtggatttgaaaccaagttcctgagcattcac 687
               ||||||| ||||||||| |||||| ||||||||||  |||||||||||||||||||||||
Sbjct: 1632870 tactgatctatcagttcgtggagtctcagtggattcaaaaccaagttcctgagcattcac 1632929

                
Query: 688     a 688
               |
Sbjct: 1632930 a 1632930



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 130     ttaatttattgacaaggcct 149
               ||||||||||||||||||||
Sbjct: 1632267 ttaatttattgacaaggcct 1632286



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>dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1007_D04
          Length = 125503

 Score =  204 bits (103), Expect = 3e-49
 Identities = 190/219 (86%)
 Strand = Plus / Plus

                                                                         
Query: 409   ctaggacaccttgtgcgagatttttatgtagttcatgagccttctcagagcattaccgct 468
             ||||||||| |||||||||||||||||||| ||||||||||| ||||| || ||||||||
Sbjct: 69528 ctaggacactttgtgcgagatttttatgtaattcatgagcctgctcagggctttaccgct 69587

                                                                         
Query: 469   gtcgatggcttcccttgccctgtcaagcgcggagttgatatcctgagctccactgcagcc 528
             ||| |||||||| |||||||||||||| ||||| |||||||||| ||||||| |||||||
Sbjct: 69588 gtcaatggcttctcttgccctgtcaagtgcggacttgatatcctcagctccagtgcagcc 69647

                                                                         
Query: 529   taacaagtggtcagccatagcggcgttaagaactattcggtcataagcgggccctttgtc 588
             ||| | ||||||| |||| || || || || ||||||| |||||| || || ||||| ||
Sbjct: 69648 taagaggtggtcaaccatggcagcatttaggactattctgtcataggctggtcctttctc 69707

                                                    
Query: 589   tccacccagtgctgacaaacccagctccaagtttttcag 627
              |||| ||| |||| |||||||| |||||||||||||||
Sbjct: 69708 cccactcagcgctgccaaacccaactccaagtttttcag 69746



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 56/61 (91%)
 Strand = Plus / Plus

                                                                         
Query: 628   tactgatttatcagttcttggagtttcagtggatttgaaaccaagttcctgagcattcac 687
             ||||||| ||||||||| |||||| ||||||||||  |||||||||||||||||||||||
Sbjct: 69973 tactgatctatcagttcgtggagtctcagtggattcaaaaccaagttcctgagcattcac 70032

              
Query: 688   a 688
             |
Sbjct: 70033 a 70033



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   ttaatttattgacaaggcct 149
             ||||||||||||||||||||
Sbjct: 69370 ttaatttattgacaaggcct 69389



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>emb|AL365179.30| Human DNA sequence from clone RP13-34C21 on chromosome Xq24-25 Contains a
              chromobox homolog 1 (HP1 beta homolog Drosophila) (CBX1)
              pseudogene and a CpG island, complete sequence
          Length = 180851

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 633    atttatcagttcttggagttt 653
              |||||||||||||||||||||
Sbjct: 159480 atttatcagttcttggagttt 159500



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>gb|AF461538.1| Clostridium botulinum strain 62A putative flagellin, HA-70 (ha70),
           HA-17 (ha17), HA-33 (ha33), and BotR (botR) genes,
           complete cds; and NTNH (ntnh) gene, partial cds
          Length = 7599

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 119 gttaattaaacttaatttatt 139
           |||||||||||||||||||||
Sbjct: 447 gttaattaaacttaatttatt 427



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>gb|AC104120.2| Homo sapiens chromosome 5 clone RP11-404L6, complete sequence
          Length = 123372

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 635   ttatcagttcttggagtttca 655
             |||||||||||||||||||||
Sbjct: 18368 ttatcagttcttggagtttca 18348



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>ref|XM_628967.1| Dictyostelium discoideum hypothetical protein (DDB0192102), partial
           mRNA
          Length = 537

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 120 ttaattaaacttaatttatt 139
           ||||||||||||||||||||
Sbjct: 515 ttaattaaacttaatttatt 496



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>ref|XM_323031.1| Neurospora crassa OR74A related to 2''-O-ribosyl phosphate
            transferase RIT1 [MIPS] (NCU03730.1) partial mRNA
          Length = 1428

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 202  aagacaatctctttgtttgc 221
            ||||||||||||||||||||
Sbjct: 1196 aagacaatctctttgtttgc 1177



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>ref|XM_956413.1| Neurospora crassa OR74A related to 2''-O-ribosyl phosphate
            transferase RIT1 [MIPS] (NCU03730.1) partial mRNA
          Length = 1428

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 202  aagacaatctctttgtttgc 221
            ||||||||||||||||||||
Sbjct: 1196 aagacaatctctttgtttgc 1177



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>gb|AC113201.15| Mus musculus chromosome 6, clone RP23-271G7, complete sequence
          Length = 205816

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 649    agtttcagtggatttgaaac 668
              ||||||||||||||||||||
Sbjct: 124251 agtttcagtggatttgaaac 124270



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>gb|BC088769.1| Xenopus tropicalis chymotrypsin-like, mRNA (cDNA clone MGC:108128
           IMAGE:7005666), complete cds
          Length = 868

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 287 gtgacacgacaatgaggagcagttacaa 314
           ||||||| |||||||| |||||||||||
Sbjct: 241 gtgacaccacaatgagcagcagttacaa 214



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>gb|AC121290.6| Mus musculus chromosome 16, clone RP23-84N4, complete sequence
          Length = 241184

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     atagtttgcatatgtttata 20
             ||||||||||||||||||||
Sbjct: 95967 atagtttgcatatgtttata 95986



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>gb|AC165174.2| Zea mays clone ZMMBBb-127F19, complete sequence
          Length = 187659

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 258    gacatgtggggcctggcccc 277
              ||||||||||||||||||||
Sbjct: 175556 gacatgtggggcctggcccc 175575



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>gb|AC121923.3| Mus musculus BAC clone RP24-198O18 from chromosome 8, complete sequence
          Length = 172772

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 115   ttcagttaattaaacttaatttat 138
             ||||||||||||||| ||||||||
Sbjct: 31543 ttcagttaattaaacataatttat 31566



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>emb|CR759765.6| Zebrafish DNA sequence from clone DKEY-1F12 in linkage group 17, complete
              sequence
          Length = 224482

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 120    ttaattaaacttaatttatt 139
              ||||||||||||||||||||
Sbjct: 163519 ttaattaaacttaatttatt 163500



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>ref|NM_001008776.1| Rattus norvegicus similar to serine proteinase inhibitor A11 gene
           (SERPINA11) (LOC362774), mRNA
          Length = 1435

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 ctggccccaccttctcagtg 289
           ||||||||||||||||||||
Sbjct: 943 ctggccccaccttctcagtg 924



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>gb|BC111708.1| Rattus norvegicus similar to serine proteinase inhibitor A11 gene
           (SERPINA11), mRNA (cDNA clone MGC:124917 IMAGE:7368690),
           complete cds
          Length = 1405

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 ctggccccaccttctcagtg 289
           ||||||||||||||||||||
Sbjct: 921 ctggccccaccttctcagtg 902



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>emb|AL356099.15| Human DNA sequence from clone RP11-357A18 on chromosome 10, complete
              sequence
          Length = 163152

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 507    tatcctgagctccactgcag 526
              ||||||||||||||||||||
Sbjct: 132281 tatcctgagctccactgcag 132300



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>gb|AY325135.1| Rattus norvegicus Ab1-046 mRNA, complete cds
          Length = 1435

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 ctggccccaccttctcagtg 289
           ||||||||||||||||||||
Sbjct: 943 ctggccccaccttctcagtg 924



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>emb|AL021406.1|HS997K18 Human DNA sequence from clone RP5-997K18 on chromosome 20p12 Contains a
             novel gene, complete sequence
          Length = 119420

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 114   tttcagttaattaaacttaattta 137
             |||||| |||||||||||||||||
Sbjct: 80152 tttcagctaattaaacttaattta 80175



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>ref|NM_001011477.1| Xenopus tropicalis chymotrypsin-like (ctrl), mRNA
          Length = 868

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 287 gtgacacgacaatgaggagcagttacaa 314
           ||||||| |||||||| |||||||||||
Sbjct: 241 gtgacaccacaatgagcagcagttacaa 214



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>gb|AC117379.3| Homo sapiens 3 BAC RP11-392C7 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 181191

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 85     taataaaatcctcaacaaactgtg 108
              ||||||||||||||| ||||||||
Sbjct: 109630 taataaaatcctcaaaaaactgtg 109607



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>gb|AC026391.7| Homo sapiens chromosome 10 clone RP11-135D11, complete sequence
          Length = 177578

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 507    tatcctgagctccactgcag 526
              ||||||||||||||||||||
Sbjct: 141960 tatcctgagctccactgcag 141941



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>gb|AC154909.4| Mus musculus BAC clone RP23-185B22 from chromosome 8, complete
           sequence
          Length = 195479

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 115 ttcagttaattaaacttaatttat 138
           ||||||||||||||| ||||||||
Sbjct: 44  ttcagttaattaaacataatttat 21



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>gb|AC160211.1| Genomic seqeunce for Zea mays BAC clone ZMMBBb0448F23, complete
            sequence
          Length = 132549

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 258  gacatgtggggcctggcccc 277
            ||||||||||||||||||||
Sbjct: 2607 gacatgtggggcctggcccc 2588



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>gb|AC084149.5| Homo sapiens BAC clone RP11-221F12 from 2, complete sequence
          Length = 64234

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 121   taattaaacttaatttattgacaa 144
             |||||||| |||||||||||||||
Sbjct: 61075 taattaaaattaatttattgacaa 61098



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>gb|AC011489.6|AC011489 Homo sapiens chromosome 19 clone CTB-179K24, complete sequence
          Length = 164034

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 581  cctttgtctccacccagtgc 600
            ||||||||||||||||||||
Sbjct: 5084 cctttgtctccacccagtgc 5103



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>gb|AC153975.4| Mus musculus 10 BAC RP24-186L12 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 145072

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   ttaattaaacttaatttatt 139
             ||||||||||||||||||||
Sbjct: 89609 ttaattaaacttaatttatt 89590



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>emb|BX537302.12| Mouse DNA sequence from clone RP23-349I9 on chromosome 7, complete
             sequence
          Length = 214393

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 638   tcagttcttggagtttcagt 657
             ||||||||||||||||||||
Sbjct: 60462 tcagttcttggagtttcagt 60481



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>gb|AC157776.1| Zea mays chromosome 8 BAC clone ZMMBBb0483G05, complete sequence
          Length = 147470

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 258    gacatgtggggcctggcccc 277
              ||||||||||||||||||||
Sbjct: 100721 gacatgtggggcctggcccc 100702



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>gb|AC157487.1| Genomic sequence for Zea mays clone ZMMBBb0614J24, from chromosome 8,
             complete sequence
          Length = 136932

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 258   gacatgtggggcctggcccc 277
             ||||||||||||||||||||
Sbjct: 90928 gacatgtggggcctggcccc 90909



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>gb|AC148600.2| Xenopus tropicalis clone CH216-62H10, complete sequence
          Length = 162075

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 97     caacaaactgtgattccttt 116
              ||||||||||||||||||||
Sbjct: 106216 caacaaactgtgattccttt 106197



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>gb|AF037338.1|AF037338 Homo sapiens cleft lip and palate transmembrane protein 1 (CLPTM1)
             gene, complete cds
          Length = 39108

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 581   cctttgtctccacccagtgc 600
             ||||||||||||||||||||
Sbjct: 22160 cctttgtctccacccagtgc 22179



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>emb|AL513467.1|NC17E5 Neurospora crassa DNA linkage group V Cosmid contig 17E5
          Length = 130049

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 202   aagacaatctctttgtttgc 221
             ||||||||||||||||||||
Sbjct: 41736 aagacaatctctttgtttgc 41755



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>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome
          Length = 150519

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   aattaaacttaatttattga 141
             ||||||||||||||||||||
Sbjct: 54415 aattaaacttaatttattga 54396



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>emb|AL731840.17| Mouse DNA sequence from clone RP23-52C15 on chromosome 2, complete
             sequence
          Length = 61822

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   aatttattgacaaggcctgg 151
             ||||||||||||||||||||
Sbjct: 45151 aatttattgacaaggcctgg 45132


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,395,620
Number of Sequences: 3902068
Number of extensions: 6395620
Number of successful extensions: 129330
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 129212
Number of HSP's gapped (non-prelim): 118
length of query: 701
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 678
effective length of database: 17,143,297,704
effective search space: 11623155843312
effective search space used: 11623155843312
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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