ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd27h17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_473881.1| Oryza sativa (japonica cultivar-group), predic... 74 6e-10
2emb|AL662950.2|OSJN00152 Oryza sativa genomic DNA, chromosome 4,... 74 6e-10
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 74 6e-10
4dbj|AK058602.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 6e-10
5gb|AY103926.1| Zea mays PCO137834 mRNA sequence 54 6e-04
6gb|AC164091.3| Mus musculus BAC clone RP23-97M20 from chromosome... 44 0.54
7emb|AL355606.14| Human DNA sequence from clone RP11-90I7 on chro... 44 0.54
8gb|AC154173.3| Mus musculus BAC clone RP23-3C4 from 3, complete ... 44 0.54
9emb|AL137851.12| Human DNA sequence from clone RP11-6H18 on chro... 42 2.1
10gb|AC097268.10| Pan troglodytes BAC RP43-43O8 (Roswell Park Can... 42 2.1
11ref|XM_575436.1| PREDICTED: Rattus norvegicus similar to RIKEN c... 42 2.1
12emb|AL513422.2|HS527D15 Homo sapiens chromosome 9 BAC RP11-527D1... 42 2.1
13ref|XM_641987.1| Dictyostelium discoideum hypothetical protein (... 40 8.4
14gb|AY350711.1| Sisymbrium irio clone BAC Sio11E11, complete sequ... 40 8.4
15gb|AC092120.4| Homo sapiens chromosome 16 clone RP1-168P16, comp... 40 8.4
16emb|CT009769.4| Mouse DNA sequence from clone RP23-44C21 on chro... 40 8.4
17emb|CR926035.1| Pongo pygmaeus mRNA; cDNA DKFZp459A0320 (from cl... 40 8.4
18emb|AL139326.15| Human DNA sequence from clone RP11-351K3 on chr... 40 8.4
19gb|AC158969.5| Mus musculus chromosome 1, clone RP23-264G9, comp... 40 8.4
20emb|AL355933.1|NCB8B20 Neurospora crassa DNA linkage group II BA... 40 8.4
21emb|AL683804.15| Mouse DNA sequence from clone RP23-17F2 on chro... 40 8.4
22gb|AC012564.21| Homo sapiens chromosome 8, clone RP11-85M22, com... 40 8.4
23ref|XM_686936.1| PREDICTED: Danio rerio im:7148063 (im:7148063),... 40 8.4
24gb|AC159302.3| Mus musculus BAC clone RP23-238C13 from chromosom... 40 8.4
25gb|AC159887.2| Mus musculus BAC clone RP24-249O13 from chromosom... 40 8.4
26gb|AC005719.2|AC005719 Drosophila melanogaster, chromosome 2L, r... 40 8.4
27dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
28gb|AY064402.1| Leishmania major SRP54-like protein gene, partial... 40 8.4
29emb|BX005267.7| Zebrafish DNA sequence from clone DKEY-46K2 in l... 40 8.4
30dbj|AP004704.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
31dbj|AP006265.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
32emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromo... 40 8.4
33gb|AC130534.5| Mus musculus BAC clone RP23-216A12 from 1, comple... 40 8.4
34emb|BX936306.10| Zebrafish DNA sequence from clone DKEY-16J12 in... 40 8.4
35gb|BC056714.1| Danio rerio im:7148063, mRNA (cDNA clone IMAGE:67... 40 8.4
36emb|AL389899.1|NCB7J19 Neurospora crassa DNA linkage group II BA... 40 8.4
37gb|AE003664.3| Drosophila melanogaster chromosome 2L, section 73... 40 8.4
38emb|AL928738.8| Mouse DNA sequence from clone RP23-76M15 on chro... 40 8.4
39dbj|AP004716.1| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 8.4 
>ref|XM_473881.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 5496

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 88/105 (83%)
 Strand = Plus / Minus

                                                                        
Query: 451  ctagtatctccttccgaggaacacgccgatgactactgacagcagagcgacgcccaagat 510
            |||||||||| | || || || || |||||||  || |||||||| ||||| |||| |||
Sbjct: 5496 ctagtatctcttcccaagaaatacaccgatgagcacggacagcagcgcgactcccaggat 5437

                                                         
Query: 511  gaacttgaaggccatgataccagagggttcccgcagttgttgctg 555
            |||||| ||||||||||||||||| || || ||||||| ||||||
Sbjct: 5436 gaacttaaaggccatgataccagaaggctctcgcagttcttgctg 5392
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>emb|AL662950.2|OSJN00152 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0008M17,
             complete sequence
          Length = 133279

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 88/105 (83%)
 Strand = Plus / Minus

                                                                         
Query: 451   ctagtatctccttccgaggaacacgccgatgactactgacagcagagcgacgcccaagat 510
             |||||||||| | || || || || |||||||  || |||||||| ||||| |||| |||
Sbjct: 51427 ctagtatctcttcccaagaaatacaccgatgagcacggacagcagcgcgactcccaggat 51368

                                                          
Query: 511   gaacttgaaggccatgataccagagggttcccgcagttgttgctg 555
             |||||| ||||||||||||||||| || || ||||||| ||||||
Sbjct: 51367 gaacttaaaggccatgataccagaaggctctcgcagttcttgctg 51323
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 88/105 (83%)
 Strand = Plus / Minus

                                                                            
Query: 451      ctagtatctccttccgaggaacacgccgatgactactgacagcagagcgacgcccaagat 510
                |||||||||| | || || || || |||||||  || |||||||| ||||| |||| |||
Sbjct: 31229825 ctagtatctcttcccaagaaatacaccgatgagcacggacagcagcgcgactcccaggat 31229766

                                                             
Query: 511      gaacttgaaggccatgataccagagggttcccgcagttgttgctg 555
                |||||| ||||||||||||||||| || || ||||||| ||||||
Sbjct: 31229765 gaacttaaaggccatgataccagaaggctctcgcagttcttgctg 31229721
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>dbj|AK058602.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-H09, full
           insert sequence
          Length = 888

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 88/105 (83%)
 Strand = Plus / Minus

                                                                       
Query: 451 ctagtatctccttccgaggaacacgccgatgactactgacagcagagcgacgcccaagat 510
           |||||||||| | || || || || |||||||  || |||||||| ||||| |||| |||
Sbjct: 501 ctagtatctcttcccaagaaatacaccgatgagcacggacagcagcgcgactcccaggat 442

                                                        
Query: 511 gaacttgaaggccatgataccagagggttcccgcagttgttgctg 555
           |||||| ||||||||||||||||| || || ||||||| ||||||
Sbjct: 441 gaacttaaaggccatgataccagaaggctctcgcagttcttgctg 397
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>gb|AY103926.1| Zea mays PCO137834 mRNA sequence
          Length = 1818

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                       
Query: 470  aacacgccgatgactactgacagcagagcgacgcccaagatgaacttgaaggccatgat 528
            ||||||||||| |  || |||||||| || || |||| |||||||||||||||||||||
Sbjct: 1400 aacacgccgattaggacagacagcagggcaactcccaggatgaacttgaaggccatgat 1342
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>gb|AC164091.3| Mus musculus BAC clone RP23-97M20 from chromosome 3, complete sequence
          Length = 218807

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 116   acacagagagagagatgtagatacaa 141
             ||||||||||||||| ||||||||||
Sbjct: 58958 acacagagagagagaagtagatacaa 58983
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>emb|AL355606.14| Human DNA sequence from clone RP11-90I7 on chromosome X Contains the
             gene for hepatocellular carcinoma-associated antigen 127
             (HCA127) (FLJ12856, FLJ12856, KIAA1166), complete sequence
          Length = 163283

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 75    accatatgaacaaataaagatttctg 100
             |||||||||| |||||||||||||||
Sbjct: 40773 accatatgaagaaataaagatttctg 40748
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>gb|AC154173.3| Mus musculus BAC clone RP23-3C4 from 3, complete sequence
          Length = 214016

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 116    acacagagagagagatgtagatacaa 141
              ||||||||||||||| ||||||||||
Sbjct: 211152 acacagagagagagaagtagatacaa 211177
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>emb|AL137851.12| Human DNA sequence from clone RP11-6H18 on chromosome 9p23-24.3
            Contains a novel gene and part of a variant of the PTPRD
            gene for protein tyrosine phosphatase, receptor type, D
            (HPTP, PTPD, HPTPD), complete sequence
          Length = 139182

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 115  tacacagagagagagatgtag 135
            |||||||||||||||||||||
Sbjct: 3320 tacacagagagagagatgtag 3300
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>gb|AC097268.10| Pan troglodytes  BAC RP43-43O8 (Roswell Park Cancer Institute) complete
             sequence
          Length = 241278

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 584   gcctgagataagtcctgttct 604
             |||||||||||||||||||||
Sbjct: 27492 gcctgagataagtcctgttct 27512
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>ref|XM_575436.1| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 9430071P14 gene
           (LOC500085), mRNA
          Length = 1592

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 508 gatgaacttgaaggccatgat 528
           |||||||||||||||||||||
Sbjct: 770 gatgaacttgaaggccatgat 750
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>emb|AL513422.2|HS527D15 Homo sapiens chromosome 9 BAC RP11-527D15, complete sequence
          Length = 166169

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 115   tacacagagagagagatgtag 135
             |||||||||||||||||||||
Sbjct: 68717 tacacagagagagagatgtag 68697
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>ref|XM_641987.1| Dictyostelium discoideum hypothetical protein (DDB0189325), partial
           mRNA
          Length = 624

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 78  atatgaacaaataaagattt 97
           ||||||||||||||||||||
Sbjct: 548 atatgaacaaataaagattt 529
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>gb|AY350711.1| Sisymbrium irio clone BAC Sio11E11, complete sequence
          Length = 95357

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   tttttacacagagagagaga 130
             ||||||||||||||||||||
Sbjct: 94537 tttttacacagagagagaga 94518
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>gb|AC092120.4| Homo sapiens chromosome 16 clone RP1-168P16, complete sequence
          Length = 113368

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 424   accaccaggaacctcacaagagca 447
             |||||||||||||| |||||||||
Sbjct: 41204 accaccaggaacctaacaagagca 41227
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>emb|CT009769.4| Mouse DNA sequence from clone RP23-44C21 on chromosome 9, complete
              sequence
          Length = 197074

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 382    aagcagtttttagctgttaa 401
              ||||||||||||||||||||
Sbjct: 105629 aagcagtttttagctgttaa 105610
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>emb|CR926035.1| Pongo pygmaeus mRNA; cDNA DKFZp459A0320 (from clone DKFZp459A0320)
          Length = 2176

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 312  ttcaattgcaatccacgaaa 331
            ||||||||||||||||||||
Sbjct: 2109 ttcaattgcaatccacgaaa 2128
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>emb|AL139326.15| Human DNA sequence from clone RP11-351K3 on chromosome 13 Contains
            the 3' end of the COG3 gene for component of oligomeric
            golgi complex 3, a novel gene (FLJ32682),a translocase of
            inner mitochondrial membrane 9 homolog (yeast) (TIMM9)
            pseudogene and a CpG island, complete sequence
          Length = 175588

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 203  taggaatgaacaaaaaccaa 222
            ||||||||||||||||||||
Sbjct: 9561 taggaatgaacaaaaaccaa 9542
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>gb|AC158969.5| Mus musculus chromosome 1, clone RP23-264G9, complete sequence
          Length = 216914

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 126   agagatgtagatacaagctcactg 149
             |||| |||||||||||||||||||
Sbjct: 39950 agagctgtagatacaagctcactg 39927
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>emb|AL355933.1|NCB8B20 Neurospora crassa DNA linkage group II BAC clone B8B20
          Length = 86476

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 103   agacttcctttttacacagagagagaga 130
             ||||||||||||| || |||||||||||
Sbjct: 18392 agacttcctttttgcagagagagagaga 18365
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>emb|AL683804.15| Mouse DNA sequence from clone RP23-17F2 on chromosome 1 Contains  a
             SEC61 gamma subunit (Sec61g) pseudogene, a limb expression
             1 homolog (chicken) (Lix1) pseudogene, a novel pseudogene,
             the 5' end of the gene for an ortholog of human Ras
             association (RalGDS/AF-6) and pleckstrin homology domains
             1 RAPH1 and a CpG island, complete sequence
          Length = 198631

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 126   agagatgtagatacaagctcactg 149
             |||| |||||||||||||||||||
Sbjct: 34371 agagctgtagatacaagctcactg 34394
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>gb|AC012564.21| Homo sapiens chromosome 8, clone RP11-85M22, complete sequence
          Length = 207682

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 95     tttctgacagacttcctttttacacaga 122
              |||||| ||||||| |||||||||||||
Sbjct: 103643 tttctgccagacttgctttttacacaga 103616
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>ref|XM_686936.1| PREDICTED: Danio rerio im:7148063 (im:7148063), mRNA
          Length = 1048

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 582 gagcctgagataagtcctgttctt 605
           ||||||||||||| ||||||||||
Sbjct: 59  gagcctgagataattcctgttctt 36
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>gb|AC159302.3| Mus musculus BAC clone RP23-238C13 from chromosome 8, complete sequence
          Length = 183988

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 92    agatttctgacagacttccttttt 115
             ||||||||||||||||| ||||||
Sbjct: 72937 agatttctgacagactttcttttt 72914
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>gb|AC159887.2| Mus musculus BAC clone RP24-249O13 from chromosome 9, complete sequence
          Length = 160241

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 382    aagcagtttttagctgttaa 401
              ||||||||||||||||||||
Sbjct: 148339 aagcagtttttagctgttaa 148358
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>gb|AC005719.2|AC005719 Drosophila melanogaster, chromosome 2L, region 38A5-38B4, BAC clone
             BACR48M05, complete sequence
          Length = 188341

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   tttttacacagagagagaga 130
             ||||||||||||||||||||
Sbjct: 63804 tttttacacagagagagaga 63823
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 154      caaaaaccaaattgcatgca 173
                ||||||||||||||||||||
Sbjct: 27481373 caaaaaccaaattgcatgca 27481354
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>gb|AY064402.1| Leishmania major SRP54-like protein gene, partial cds
          Length = 2469

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 505  caagatgaacttgaaggccatgat 528
            |||||||||||| |||||||||||
Sbjct: 1585 caagatgaacttcaaggccatgat 1608
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>emb|BX005267.7| Zebrafish DNA sequence from clone DKEY-46K2 in linkage group 19,
             complete sequence
          Length = 104035

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 376   catgggaagcagtttttagctgtt 399
             ||||||||||||| ||||||||||
Sbjct: 18226 catgggaagcagtatttagctgtt 18249
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>dbj|AP004704.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0544G09
          Length = 137481

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    caaaaaccaaattgcatgca 173
              ||||||||||||||||||||
Sbjct: 108168 caaaaaccaaattgcatgca 108149
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>dbj|AP006265.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1112_E06
          Length = 95069

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   caaaaaccaaattgcatgca 173
             ||||||||||||||||||||
Sbjct: 44622 caaaaaccaaattgcatgca 44603
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>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib
          Length = 2013089

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 117    cacagagagagagatgtaga 136
              ||||||||||||||||||||
Sbjct: 687799 cacagagagagagatgtaga 687780
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>gb|AC130534.5| Mus musculus BAC clone RP23-216A12 from 1, complete sequence
          Length = 198268

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 126   agagatgtagatacaagctcactg 149
             |||| |||||||||||||||||||
Sbjct: 25627 agagctgtagatacaagctcactg 25604
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>emb|BX936306.10| Zebrafish DNA sequence from clone DKEY-16J12 in linkage group 19,
             complete sequence
          Length = 70278

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 376   catgggaagcagtttttagctgtt 399
             ||||||||||||| ||||||||||
Sbjct: 62414 catgggaagcagtatttagctgtt 62391
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>gb|BC056714.1| Danio rerio im:7148063, mRNA (cDNA clone IMAGE:6791245), partial
           cds
          Length = 1860

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 582 gagcctgagataagtcctgttctt 605
           ||||||||||||| ||||||||||
Sbjct: 35  gagcctgagataattcctgttctt 12
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>emb|AL389899.1|NCB7J19 Neurospora crassa DNA linkage group II BAC clone B7J19
          Length = 57906

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 103  agacttcctttttacacagagagagaga 130
            ||||||||||||| || |||||||||||
Sbjct: 4079 agacttcctttttgcagagagagagaga 4106
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>gb|AE003664.3| Drosophila melanogaster chromosome 2L, section 73 of 83 of the complete
              sequence
          Length = 266287

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 111    tttttacacagagagagaga 130
              ||||||||||||||||||||
Sbjct: 146703 tttttacacagagagagaga 146684
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>emb|AL928738.8| Mouse DNA sequence from clone RP23-76M15 on chromosome 4, complete
              sequence
          Length = 188568

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 284    tgacttctccctgaaagcca 303
              ||||||||||||||||||||
Sbjct: 135879 tgacttctccctgaaagcca 135898
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>dbj|AP004716.1| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1987G5
          Length = 189987

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 95     tttctgacagacttcctttttacacaga 122
              |||||| ||||||| |||||||||||||
Sbjct: 142792 tttctgccagacttgctttttacacaga 142765


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9,932,527
Number of Sequences: 3902068
Number of extensions: 9932527
Number of successful extensions: 168840
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 168698
Number of HSP's gapped (non-prelim): 142
length of query: 617
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 594
effective length of database: 17,143,297,704
effective search space: 10183118836176
effective search space used: 10183118836176
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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