Clone Name	rbasd27h16
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mR...	509	e-141
2	gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mR...	509	e-141
3	gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5...	484	e-134
4	gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA	454	e-125
5	gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carbo...	383	e-103
6	gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form...	361	8e-97
7	gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha for...	313	2e-82
8	dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clon...	258	8e-66
9	gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carb...	250	2e-63
10	dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ...	250	2e-63
11	gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate ca...	250	2e-63
12	dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clon...	250	2e-63
13	dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clon...	250	2e-63
14	dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clon...	250	2e-63
15	dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clon...	250	2e-63
16	dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase s...	250	2e-63
17	dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase l...	250	2e-63
18	gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome...	244	1e-61
19	gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome...	244	1e-61
20	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	244	1e-61
21	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	244	1e-61
22	gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase ...	218	7e-54
23	gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase ...	218	7e-54
24	gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA...	214	1e-52
25	gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase ...	210	2e-51
26	gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase ...	210	2e-51
27	gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/ox...	188	6e-45
28	gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/ox...	188	6e-45
29	ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	186	2e-44
30	ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	186	2e-44
31	ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	186	2e-44
32	gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890)...	186	2e-44
33	gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, c...	186	2e-44
34	gb|BT000613.1| Arabidopsis thaliana Rubsico activase (At2g39730...	186	2e-44
35	gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map ...	186	2e-44
36	gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, comp...	186	2e-44
37	gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, compl...	186	2e-44
38	gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730...	186	2e-44
39	gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete se...	186	2e-44
40	gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphospha...	186	2e-44
41	gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, compl...	178	6e-42
42	gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate c...	174	9e-41
43	gb|AY312576.1| Larrea tridentata Rubisco activase beta form prec...	172	4e-40
44	gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosph...	172	4e-40
45	emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate car...	168	6e-39
46	gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 gen...	165	9e-38
47	gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 gen...	165	9e-38
48	gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 gen...	165	9e-38
49	gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 gen...	165	9e-38
50	gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 gen...	165	9e-38
51	gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 gen...	165	9e-38
52	gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 gen...	165	9e-38
53	gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 gen...	165	9e-38
54	gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosph...	159	6e-36
55	gb|AY110044.1| Zea mays CL1146_1 mRNA sequence	159	6e-36
56	gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carb...	157	2e-35
57	gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence	157	2e-35
58	gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 gen...	157	2e-35
59	gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 gen...	157	2e-35
60	gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 gen...	157	2e-35
61	gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 gen...	157	2e-35
62	gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 gen...	157	2e-35
63	gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 gen...	157	2e-35
64	gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genom...	157	2e-35
65	gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1...	155	9e-35
66	gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/...	153	3e-34
67	gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds	153	3e-34
68	gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA...	145	8e-32
69	gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, part...	141	1e-30
70	gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bi...	137	2e-29
71	gb|AY312575.1| Larrea tridentata Rubisco activase alpha form pre...	133	3e-28
72	gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence	133	3e-28
73	gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precur...	131	1e-27
74	gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precur...	131	1e-27
75	gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate...	131	1e-27
76	emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphat...	105	7e-20
77	emb|Y10657.1|CLRCAGENE C.littorale rca gene	98	2e-17
78	emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase	98	2e-17
79	emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphospha...	94	3e-16
80	gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase m...	92	1e-15
81	emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosph...	88	2e-14
82	gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precurso...	88	2e-14
83	gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence	76	7e-11
84	emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase	72	1e-09
85	ref|NM_105969.1| Arabidopsis thaliana ATP binding / ATPase AT1G7...	56	6e-05
86	gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete s...	56	6e-05
87	gb|AY078044.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, com...	56	6e-05
88	gb|AF361834.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, com...	56	6e-05
89	emb|BX815704.1|CNS0AARM Arabidopsis thaliana Full-length cDNA Co...	56	6e-05
90	dbj|AK118942.1| Arabidopsis thaliana At1g73110 mRNA for unknown ...	56	6e-05
91	gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N...	56	6e-05
92	emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubis...	54	2e-04
93	emb|BX813694.1|CNS0ADV2 Arabidopsis thaliana Full-length cDNA Co...	54	2e-04
94	gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete se...	48	0.015
95	gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete se...	48	0.015
96	gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) ...	44	0.23
97	emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putat...	44	0.23
98	gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate car...	44	0.23
99	emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genom...	42	0.91
100	emb|BX818441.1|CNS0ACQX Arabidopsis thaliana Full-length cDNA Co...	42	0.91
101	gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complet...	40	3.6
102	emb|Z73941.1|LJRAB7B L.japonicus mRNA for small GTP-binding prot...	40	3.6
103	gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome	40	3.6

---

>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds
          Length = 1709

 Score =  509 bits (257), Expect = e-141
 Identities = 271/276 (98%)
 Strand = Plus / Minus

                                                                        
Query: 1    cacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacga 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1159 cacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatctttacga 1100

                                                                        
Query: 61   cagactcgtcactgacattgtcggtctggaagatacccttgcagacaccgatacggtcgt 120
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1099 cagactcgtcacagacattgtcggtctggaagatacccttgcagacaccgatacggtcgt 1040

                                                                        
Query: 121  cacgggtgggagcccagtagaacttctccatacgaccatcacggatcagaggagcgtaga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1039 cacgggtgggagcccagtagaacttctccatacgaccatcacggatcagaggagcgtaga 980

                                                                        
Query: 181  gcgtcgagaaatcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgt 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||
Sbjct: 979  gcgtcgagaaatcgttaccggtgacgacgatgggcacacgggggttctccctcttgttgt 920

                                                
Query: 241  acatgccanggagctgcacgttggtgggggcatcgg 276
            |||||||| |||||||||||||||||||||||||||
Sbjct: 919  acatgccagggagctgcacgttggtgggggcatcgg 884

---

>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end
          Length = 1394

 Score =  509 bits (257), Expect = e-141
 Identities = 271/276 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   cacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 904 cacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatctttacga 845

                                                                       
Query: 61  cagactcgtcactgacattgtcggtctggaagatacccttgcagacaccgatacggtcgt 120
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 cagactcgtcacagacattgtcggtctggaagatacccttgcagacaccgatacggtcgt 785

                                                                       
Query: 121 cacgggtgggagcccagtagaacttctccatacgaccatcacggatcagaggagcgtaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 cacgggtgggagcccagtagaacttctccatacgaccatcacggatcagaggagcgtaga 725

                                                                       
Query: 181 gcgtcgagaaatcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||
Sbjct: 724 gcgtcgagaaatcgttaccggtgacgacgatgggcacacgggggttctccctcttgttgt 665

                                               
Query: 241 acatgccanggagctgcacgttggtgggggcatcgg 276
           |||||||| |||||||||||||||||||||||||||
Sbjct: 664 acatgccagggagctgcacgttggtgggggcatcgg 629

---

>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase
            activase (RcaB) gene, complete cds; and ribulose
            1,5-bisphosphate carboxylase activase  (RcaA) gene,
            alternatively spliced, complete cds
          Length = 8766

 Score =  484 bits (244), Expect = e-134
 Identities = 252/255 (98%)
 Strand = Plus / Minus

                                                                        
Query: 22   caatggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgt 81
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6880 caatggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgt 6821

                                                                        
Query: 82   cggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtaga 141
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6820 cggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtaga 6761

                                                                        
Query: 142  acttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccgg 201
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6760 acttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccgg 6701

                                                                        
Query: 202  tgacgacgatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgt 261
            |||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||
Sbjct: 6700 tgacgacgatgggcacacgggggttctccctcttgttgtacatgccagggagctgcacgt 6641

                           
Query: 262  tggtgggggcatcgg 276
            |||||||||||||||
Sbjct: 6640 tggtgggggcatcgg 6626



 Score =  214 bits (108), Expect = 1e-52
 Identities = 170/191 (89%)
 Strand = Plus / Minus

                                                                        
Query: 78   ttgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccag 137
            ||||||||  ||||||| |||||||| || ||||| ||||| || |||||||| ||||||
Sbjct: 3697 ttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccag 3638

                                                                        
Query: 138  tagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgtta 197
            |||||||||||||| || || ||||||||||| |||||||| ||||||||||| ||||| 
Sbjct: 3637 tagaacttctccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtcgttg 3578

                                                                        
Query: 198  ccggtgacgacgatgggcacacgggggttctcctccttgttgtacatgccanggagctgc 257
            |||||||||| ||||||||| |||||||||||||||||||||||||| ||  ||||||||
Sbjct: 3577 ccggtgacgatgatgggcacgcgggggttctcctccttgttgtacatccccgggagctgc 3518

                       
Query: 258  acgttggtggg 268
            |||||||||||
Sbjct: 3517 acgttggtggg 3507



 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1    cacgcagagcaccgaaaaagtc 22
            ||||||||||||||||||||||
Sbjct: 7042 cacgcagagcaccgaaaaagtc 7021

---

>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA
          Length = 1643

 Score =  454 bits (229), Expect = e-125
 Identities = 264/276 (95%)
 Strand = Plus / Minus

                                                                        
Query: 1    cacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacga 60
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1079 cacgcagagcaccgaaaaagtcgatggattgtcctgggaaggtgtcgacgatcttgacga 1020

                                                                        
Query: 61   cagactcgtcactgacattgtcggtctggaagatacccttgcagacaccgatacggtcgt 120
            | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1019 cggactcgtcgctgacattgtcggtctggaagatacccttgcagacaccgatacggtcgt 960

                                                                        
Query: 121  cacgggtgggagcccagtagaacttctccatacgaccatcacggatcagaggagcgtaga 180
            | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 959  cgcgggtgggagcccagtagaacttctccatacgaccatcacggatcagaggggcgtaca 900

                                                                        
Query: 181  gcgtcgagaaatcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgt 240
             |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 899  acgtcgagaaatcgttaccagtgacgacgatgggcacacgtgggttctcctccttgttgt 840

                                                
Query: 241  acatgccanggagctgcacgttggtgggggcatcgg 276
            |||||||  |||||||||| ||||||||||||||||
Sbjct: 839  acatgcctgggagctgcacattggtgggggcatcgg 804

---

>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase
           precursor RNA, partial cds; nuclear gene for chloroplast
           product
          Length = 850

 Score =  383 bits (193), Expect = e-103
 Identities = 220/229 (96%)
 Strand = Plus / Minus

                                                                       
Query: 1   cacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacga 60
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 229 cacgcagagcaccgaaaaagtcgatggattgtcctgggaaggtgtcgacgatcttgacga 170

                                                                       
Query: 61  cagactcgtcactgacattgtcggtctggaagatacccttgcagacaccgatacggtcgt 120
           | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 cggactcgtcgctgacattgtcggtctggaagatacccttgcagacaccgatacggtcgt 110

                                                                       
Query: 121 cacgggtgggagcccagtagaacttctccatacgaccatcacggatcagaggagcgtaga 180
           | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 109 cgcgggtgggagcccagtagaacttctccatacgaccatcacggatcagaggggcgtaca 50

                                                            
Query: 181 gcgtcgagaaatcgttaccggtgacgacgatgggcacacgggggttctc 229
            |||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 49  acgtcgagaaatcgttaccagtgacgacgatgggcacacgtgggttctc 1

---

>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1646

 Score =  361 bits (182), Expect = 8e-97
 Identities = 246/268 (91%)
 Strand = Plus / Minus

                                                                        
Query: 1    cacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacga 60
            |||||||||||||||| ||||| ||||| ||||||||||| |||||||||||||||||||
Sbjct: 1090 cacgcagagcaccgaagaagtcgatggactgtcctgggaangtgtcgacgatcttgacga 1031

                                                                        
Query: 61   cagactcgtcactgacattgtcggtctggaagatacccttgcagacaccgatacggtcgt 120
            |||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 1030 cagactcgtcgctgacgttgtcggtctggaagatacccttgcagacgccgatacggtcct 971

                                                                        
Query: 121  cacgggtgggagcccagtagaacttctccatacgaccatcacggatcagaggagcgtaga 180
            | |||||||| |||||||||||||||||||||||||| |||||||| || || ||||| |
Sbjct: 970  cgcgggtgggcgcccagtagaacttctccatacgaccgtcacggatgaggggcgcgtaca 911

                                                                        
Query: 181  gcgtcgagaaatcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgt 240
            |||||||||| ||||| |||||||||| |||||| |||||||||||||||||||||||||
Sbjct: 910  gcgtcgagaagtcgttgccggtgacgatgatggggacacgggggttctcctccttgttgt 851

                                        
Query: 241  acatgccanggagctgcacgttggtggg 268
            |||| ||  |||||||||||||||||||
Sbjct: 850  acatccccgggagctgcacgttggtggg 823

---

>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1616

 Score =  313 bits (158), Expect = 2e-82
 Identities = 240/268 (89%)
 Strand = Plus / Minus

                                                                        
Query: 1    cacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacga 60
            |||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 1100 cacgcagagcaccgaagaagtcgatggactgtcctgggaaggtgtcgacgatcttgacga 1041

                                                                        
Query: 61   cagactcgtcactgacattgtcggtctggaagatacccttgcagacaccgatacggtcgt 120
            |||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 1040 cagactcgtcgctgacgttgtcggtctggaagatacccttgcagacgccgatacggtcct 981

                                                                        
Query: 121  cacgggtgggagcccagtagaacttctccatacgaccatcacggatcagaggagcgtaga 180
            | |||||||| |||||||| ||||||||||||||||| ||| | || || || ||||| |
Sbjct: 980  cgcgggtgggcgcccagtaaaacttctccatacgaccgtcaggaataaggggggcgtaca 921

                                                                        
Query: 181  gcgtcgagaaatcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgt 240
            ||||||| || ||||| |||||||| |  ||||| |||||||||||||||||||||||||
Sbjct: 920  gcgtcgaaaagtcgttgccggtgacnataatgggaacacgggggttctcctccttgttgt 861

                                        
Query: 241  acatgccanggagctgcacgttggtggg 268
            |||| ||  | |||||||||||||||||
Sbjct: 860  acatccccggaagctgcacgttggtggg 833

---

>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full
            insert sequence
          Length = 1691

 Score =  258 bits (130), Expect = 8e-66
 Identities = 231/265 (87%)
 Strand = Plus / Minus

                                                                        
Query: 1    cacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacga 60
            |||| ||||| ||||| || || |||||||| ||||||||| ||||||||||||||||||
Sbjct: 1083 cacgaagagcgccgaagaaatcgatggattggcctgggaagctgtcgacgatcttgacga 1024

                                                                        
Query: 61   cagactcgtcactgacattgtcggtctggaagatacccttgcagacaccgatacggtcgt 120
                ||||||   ||| ||||||||  ||||||||||||||||||| |||| ||||||||
Sbjct: 1023 tgtcctcgtcggggacgttgtcggtgcggaagatacccttgcagacgccgacacggtcgt 964

                                                                        
Query: 121  cacgggtgggagcccagtagaacttctccatacgaccatcacggatcagaggagcgtaga 180
            | |||||||||||||||||||||||||||||||| || |||||||| || || ||||| |
Sbjct: 963  cgcgggtgggagcccagtagaacttctccatacgcccgtcacggatgagcggcgcgtaca 904

                                                                        
Query: 181  gcgtcgagaaatcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgt 240
            |||| ||||| ||||| |||||||||| |||||| ||||||||||| |||||||||||||
Sbjct: 903  gcgtggagaagtcgttgccggtgacgatgatggggacacgggggttgtcctccttgttgt 844

                                     
Query: 241  acatgccanggagctgcacgttggt 265
            |||| ||| ||||||||||||||||
Sbjct: 843  acatcccagggagctgcacgttggt 819

---

>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            (rca) mRNA, complete cds
          Length = 1675

 Score =  250 bits (126), Expect = 2e-63
 Identities = 230/265 (86%)
 Strand = Plus / Minus

                                                                        
Query: 1    cacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacga 60
            |||| ||||| ||||| || || |||||||| ||||||||| ||||||||||||||||||
Sbjct: 1052 cacgaagagcgccgaagaaatcgatggattggcctgggaagctgtcgacgatcttgacga 993

                                                                        
Query: 61   cagactcgtcactgacattgtcggtctggaagatacccttgcagacaccgatacggtcgt 120
                ||||||   ||| ||||||||  ||||||||||||||||||| |||| ||||||||
Sbjct: 992  tgtcctcgtcggggacgttgtcggtgcggaagatacccttgcagacgccgacacggtcgt 933

                                                                        
Query: 121  cacgggtgggagcccagtagaacttctccatacgaccatcacggatcagaggagcgtaga 180
            | |||||||||||||||||||||||||||||||| || |||||||| || || ||||| |
Sbjct: 932  cgcgggtgggagcccagtagaacttctccatacgcccgtcacggatgagcggcgcgtaca 873

                                                                        
Query: 181  gcgtcgagaaatcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgt 240
            |||| ||||| ||||| |||||||||| |||||| ||||||||||| |||||||||||||
Sbjct: 872  gcgtggagaagtcgttgccggtgacgatgatggggacacgggggttgtcctccttgttgt 813

                                     
Query: 241  acatgccanggagctgcacgttggt 265
            |||| ||  ||||||||||||||||
Sbjct: 812  acatcccggggagctgcacgttggt 788

---

>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate
            carboxylase activase large isoform precursor protein,
            complete cds, clone: 13YPR038
          Length = 1558

 Score =  250 bits (126), Expect = 2e-63
 Identities = 230/265 (86%)
 Strand = Plus / Minus

                                                                        
Query: 1    cacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacga 60
            |||| ||||| ||||| || || |||||||| ||||||||| ||||||||||||||||||
Sbjct: 1047 cacgaagagcgccgaagaaatcgatggattggcctgggaagctgtcgacgatcttgacga 988

                                                                        
Query: 61   cagactcgtcactgacattgtcggtctggaagatacccttgcagacaccgatacggtcgt 120
                ||||||   ||| ||||||||  ||||||||||||||||||| |||| ||||||||
Sbjct: 987  tgtcctcgtcggggacgttgtcggtgcggaagatacccttgcagacgccgacacggtcgt 928

                                                                        
Query: 121  cacgggtgggagcccagtagaacttctccatacgaccatcacggatcagaggagcgtaga 180
            | |||||||||||||||||||||||||||||||| || |||||||| || || ||||| |
Sbjct: 927  cgcgggtgggagcccagtagaacttctccatacgcccgtcacggatgagcggcgcgtaca 868

                                                                        
Query: 181  gcgtcgagaaatcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgt 240
            |||| ||||| ||||| |||||||||| |||||| ||||||||||| |||||||||||||
Sbjct: 867  gcgtggagaagtcgttgccggtgacgatgatggggacacgggggttgtcctccttgttgt 808

                                     
Query: 241  acatgccanggagctgcacgttggt 265
            |||| ||  ||||||||||||||||
Sbjct: 807  acatcccggggagctgcacgttggt 783

---

>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA,
           partial cds; nuclear gene for chloroplast product
          Length = 651

 Score =  250 bits (126), Expect = 2e-63
 Identities = 230/265 (86%)
 Strand = Plus / Minus

                                                                       
Query: 1   cacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacga 60
           |||| ||||| ||||| || || |||||||| ||||||||| ||||||||||||||||||
Sbjct: 301 cacgaagagcgccgaagaaatcgatggattggcctgggaagctgtcgacgatcttgacga 242

                                                                       
Query: 61  cagactcgtcactgacattgtcggtctggaagatacccttgcagacaccgatacggtcgt 120
               ||||||   ||| ||||||||  ||||||||||||||||||| |||| ||||||||
Sbjct: 241 tgtcctcgtcggggacgttgtcggtgcggaagatacccttgcagacgccgacacggtcgt 182

                                                                       
Query: 121 cacgggtgggagcccagtagaacttctccatacgaccatcacggatcagaggagcgtaga 180
           | |||||||||||||||||||||||||||||||| || |||||||| || || ||||| |
Sbjct: 181 cgcgggtgggagcccagtagaacttctccatacgcccgtcacggatgagcggcgcgtaca 122

                                                                       
Query: 181 gcgtcgagaaatcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgt 240
           |||| ||||| ||||| |||||||||| |||||| ||||||||||| |||||||||||||
Sbjct: 121 gcgtggagaagtcgttgccggtgacgatgatggggacacgggggttgtcctccttgttgt 62

                                    
Query: 241 acatgccanggagctgcacgttggt 265
           |||| ||  ||||||||||||||||
Sbjct: 61  acatcccggggagctgcacgttggt 37

---

>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full
            insert sequence
          Length = 1721

 Score =  250 bits (126), Expect = 2e-63
 Identities = 230/265 (86%)
 Strand = Plus / Minus

                                                                        
Query: 1    cacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacga 60
            |||| ||||| ||||| || || |||||||| ||||||||| ||||||||||||||||||
Sbjct: 1095 cacgaagagcgccgaagaaatcgatggattggcctgggaagctgtcgacgatcttgacga 1036

                                                                        
Query: 61   cagactcgtcactgacattgtcggtctggaagatacccttgcagacaccgatacggtcgt 120
                ||||||   ||| ||||||||  ||||||||||||||||||| |||| ||||||||
Sbjct: 1035 tgtcctcgtcggggacgttgtcggtgcggaagatacccttgcagacgccgacacggtcgt 976

                                                                        
Query: 121  cacgggtgggagcccagtagaacttctccatacgaccatcacggatcagaggagcgtaga 180
            | |||||||||||||||||||||||||||||||| || |||||||| || || ||||| |
Sbjct: 975  cgcgggtgggagcccagtagaacttctccatacgcccgtcacggatgagcggcgcgtaca 916

                                                                        
Query: 181  gcgtcgagaaatcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgt 240
            |||| ||||| ||||| |||||||||| |||||| ||||||||||| |||||||||||||
Sbjct: 915  gcgtggagaagtcgttgccggtgacgatgatggggacacgggggttgtcctccttgttgt 856

                                     
Query: 241  acatgccanggagctgcacgttggt 265
            |||| ||  ||||||||||||||||
Sbjct: 855  acatcccggggagctgcacgttggt 831

---

>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full
            insert sequence
          Length = 1682

 Score =  250 bits (126), Expect = 2e-63
 Identities = 230/265 (86%)
 Strand = Plus / Minus

                                                                        
Query: 1    cacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacga 60
            |||| ||||| ||||| || || |||||||| ||||||||| ||||||||||||||||||
Sbjct: 1046 cacgaagagcgccgaagaaatcgatggattggcctgggaagctgtcgacgatcttgacga 987

                                                                        
Query: 61   cagactcgtcactgacattgtcggtctggaagatacccttgcagacaccgatacggtcgt 120
                ||||||   ||| ||||||||  ||||||||||||||||||| |||| ||||||||
Sbjct: 986  tgtcctcgtcggggacgttgtcggtgcggaagatacccttgcagacgccgacacggtcgt 927

                                                                        
Query: 121  cacgggtgggagcccagtagaacttctccatacgaccatcacggatcagaggagcgtaga 180
            | |||||||||||||||||||||||||||||||| || |||||||| || || ||||| |
Sbjct: 926  cgcgggtgggagcccagtagaacttctccatacgcccgtcacggatgagcggcgcgtaca 867

                                                                        
Query: 181  gcgtcgagaaatcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgt 240
            |||| ||||| ||||| |||||||||| |||||| ||||||||||| |||||||||||||
Sbjct: 866  gcgtggagaagtcgttgccggtgacgatgatggggacacgggggttgtcctccttgttgt 807

                                     
Query: 241  acatgccanggagctgcacgttggt 265
            |||| ||  ||||||||||||||||
Sbjct: 806  acatcccggggagctgcacgttggt 782

---

>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full
            insert sequence
          Length = 1680

 Score =  250 bits (126), Expect = 2e-63
 Identities = 230/265 (86%)
 Strand = Plus / Minus

                                                                        
Query: 1    cacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacga 60
            |||| ||||| ||||| || || |||||||| ||||||||| ||||||||||||||||||
Sbjct: 1084 cacgaagagcgccgaagaaatcgatggattggcctgggaagctgtcgacgatcttgacga 1025

                                                                        
Query: 61   cagactcgtcactgacattgtcggtctggaagatacccttgcagacaccgatacggtcgt 120
                ||||||   ||| ||||||||  ||||||||||||||||||| |||| ||||||||
Sbjct: 1024 tgtcctcgtcggggacgttgtcggtgcggaagatacccttgcagacgccgacacggtcgt 965

                                                                        
Query: 121  cacgggtgggagcccagtagaacttctccatacgaccatcacggatcagaggagcgtaga 180
            | |||||||||||||||||||||||||||||||| || |||||||| || || ||||| |
Sbjct: 964  cgcgggtgggagcccagtagaacttctccatacgcccgtcacggatgagcggcgcgtaca 905

                                                                        
Query: 181  gcgtcgagaaatcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgt 240
            |||| ||||| ||||| |||||||||| |||||| ||||||||||| |||||||||||||
Sbjct: 904  gcgtggagaagtcgttgccggtgacgatgatggggacacgggggttgtcctccttgttgt 845

                                     
Query: 241  acatgccanggagctgcacgttggt 265
            |||| ||  ||||||||||||||||
Sbjct: 844  acatcccggggagctgcacgttggt 820

---

>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full
           insert sequence
          Length = 1470

 Score =  250 bits (126), Expect = 2e-63
 Identities = 230/265 (86%)
 Strand = Plus / Minus

                                                                       
Query: 1   cacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacga 60
           |||| ||||| ||||| || || |||||||| ||||||||| ||||||||||||||||||
Sbjct: 867 cacgaagagcgccgaagaaatcgatggattggcctgggaagctgtcgacgatcttgacga 808

                                                                       
Query: 61  cagactcgtcactgacattgtcggtctggaagatacccttgcagacaccgatacggtcgt 120
               ||||||   ||| ||||||||  ||||||||||||||||||| |||| ||||||||
Sbjct: 807 tgtcctcgtcggggacgttgtcggtgcggaagatacccttgcagacgccgacacggtcgt 748

                                                                       
Query: 121 cacgggtgggagcccagtagaacttctccatacgaccatcacggatcagaggagcgtaga 180
           | |||||||||||||||||||||||||||||||| || |||||||| || || ||||| |
Sbjct: 747 cgcgggtgggagcccagtagaacttctccatacgcccgtcacggatgagcggcgcgtaca 688

                                                                       
Query: 181 gcgtcgagaaatcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgt 240
           |||| ||||| ||||| |||||||||| |||||| ||||||||||| |||||||||||||
Sbjct: 687 gcgtggagaagtcgttgccggtgacgatgatggggacacgggggttgtcctccttgttgt 628

                                    
Query: 241 acatgccanggagctgcacgttggt 265
           |||| ||  ||||||||||||||||
Sbjct: 627 acatcccggggagctgcacgttggt 603

---

>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform
            precursor, complete cds
          Length = 1706

 Score =  250 bits (126), Expect = 2e-63
 Identities = 230/265 (86%)
 Strand = Plus / Minus

                                                                        
Query: 1    cacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacga 60
            |||| ||||| ||||| || || |||||||| ||||||||| ||||||||||||||||||
Sbjct: 1088 cacgaagagcgccgaagaaatcgatggattggcctgggaagctgtcgacgatcttgacga 1029

                                                                        
Query: 61   cagactcgtcactgacattgtcggtctggaagatacccttgcagacaccgatacggtcgt 120
                ||||||   ||| ||||||||  ||||||||||||||||||| |||| ||||||||
Sbjct: 1028 tgtcctcgtcggggacgttgtcggtgcggaagatacccttgcagacgccgacacggtcgt 969

                                                                        
Query: 121  cacgggtgggagcccagtagaacttctccatacgaccatcacggatcagaggagcgtaga 180
            | |||||||||||||||||||||||||||||||| || |||||||| || || ||||| |
Sbjct: 968  cgcgggtgggagcccagtagaacttctccatacgcccgtcacggatgagcggcgcgtaca 909

                                                                        
Query: 181  gcgtcgagaaatcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgt 240
            |||| ||||| ||||| |||||||||| |||||| ||||||||||| |||||||||||||
Sbjct: 908  gcgtggagaagtcgttgccggtgacgatgatggggacacgggggttgtcctccttgttgt 849

                                     
Query: 241  acatgccanggagctgcacgttggt 265
            |||| ||  ||||||||||||||||
Sbjct: 848  acatcccggggagctgcacgttggt 824

---

>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform
            precursor, complete cds
          Length = 1623

 Score =  250 bits (126), Expect = 2e-63
 Identities = 230/265 (86%)
 Strand = Plus / Minus

                                                                        
Query: 1    cacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacga 60
            |||| ||||| ||||| || || |||||||| ||||||||| ||||||||||||||||||
Sbjct: 1082 cacgaagagcgccgaagaaatcgatggattggcctgggaagctgtcgacgatcttgacga 1023

                                                                        
Query: 61   cagactcgtcactgacattgtcggtctggaagatacccttgcagacaccgatacggtcgt 120
                ||||||   ||| ||||||||  ||||||||||||||||||| |||| ||||||||
Sbjct: 1022 tgtcctcgtcggggacgttgtcggtgcggaagatacccttgcagacgccgacacggtcgt 963

                                                                        
Query: 121  cacgggtgggagcccagtagaacttctccatacgaccatcacggatcagaggagcgtaga 180
            | |||||||||||||||||||||||||||||||| || |||||||| || || ||||| |
Sbjct: 962  cgcgggtgggagcccagtagaacttctccatacgcccgtcacggatgagcggcgcgtaca 903

                                                                        
Query: 181  gcgtcgagaaatcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgt 240
            |||| ||||| ||||| |||||||||| |||||| ||||||||||| |||||||||||||
Sbjct: 902  gcgtggagaagtcgttgccggtgacgatgatggggacacgggggttgtcctccttgttgt 843

                                     
Query: 241  acatgccanggagctgcacgttggt 265
            |||| ||  ||||||||||||||||
Sbjct: 842  acatcccggggagctgcacgttggt 818

---

>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04
              map S10003, complete sequence
          Length = 119238

 Score =  244 bits (123), Expect = 1e-61
 Identities = 212/242 (87%)
 Strand = Plus / Plus

                                                                          
Query: 24     atggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcg 83
              |||||||| ||||||||| ||||||||||||||||||    ||||||   ||| ||||||
Sbjct: 108688 atggattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcg 108747

                                                                          
Query: 84     gtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaac 143
              ||  ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||
Sbjct: 108748 gtgcggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaac 108807

                                                                          
Query: 144    ttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtg 203
              ||||||||||| || |||||||| || || ||||| ||||| ||||| ||||| ||||||
Sbjct: 108808 ttctccatacgcccgtcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtg 108867

                                                                          
Query: 204    acgacgatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttg 263
              |||| |||||| ||||||||||| ||||||||||||||||| ||  ||||||||||||||
Sbjct: 108868 acgatgatggggacacgggggttgtcctccttgttgtacatcccggggagctgcacgttg 108927

                
Query: 264    gt 265
              ||
Sbjct: 108928 gt 108929



 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                          
Query: 88     ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 147
              ||||||| ||| |||| || || || ||||| || ||||||||||||||||||||||| |
Sbjct: 112456 ggaagatgcccctgcacacgccaatgcggtcctcgcgggtgggagcccagtagaacttgt 112515

                  
Query: 148    ccat 151
              ||||
Sbjct: 112516 ccat 112519



 Score = 46.1 bits (23), Expect = 0.058
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 236    gttgtacatgccanggagctgcacgttggtgggg 269
              ||||||||| ||  ||||||||||||||||||||
Sbjct: 112577 gttgtacatccctgggagctgcacgttggtgggg 112610

---

>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026K20 map S10559, complete sequence
          Length = 115996

 Score =  244 bits (123), Expect = 1e-61
 Identities = 212/242 (87%)
 Strand = Plus / Plus

                                                                         
Query: 24    atggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcg 83
             |||||||| ||||||||| ||||||||||||||||||    ||||||   ||| ||||||
Sbjct: 30565 atggattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcg 30624

                                                                         
Query: 84    gtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaac 143
             ||  ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||
Sbjct: 30625 gtgcggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaac 30684

                                                                         
Query: 144   ttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtg 203
             ||||||||||| || |||||||| || || ||||| ||||| ||||| ||||| ||||||
Sbjct: 30685 ttctccatacgcccgtcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtg 30744

                                                                         
Query: 204   acgacgatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttg 263
             |||| |||||| ||||||||||| ||||||||||||||||| ||  ||||||||||||||
Sbjct: 30745 acgatgatggggacacgggggttgtcctccttgttgtacatcccggggagctgcacgttg 30804

               
Query: 264   gt 265
             ||
Sbjct: 30805 gt 30806



 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                         
Query: 88    ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 147
             ||||||| ||| |||| || || || ||||| || ||||||||||||||||||||||| |
Sbjct: 34333 ggaagatgcccctgcacacgccaatgcggtcctcgcgggtgggagcccagtagaacttgt 34392

                 
Query: 148   ccat 151
             ||||
Sbjct: 34393 ccat 34396



 Score = 46.1 bits (23), Expect = 0.058
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 236   gttgtacatgccanggagctgcacgttggtgggg 269
             ||||||||| ||  ||||||||||||||||||||
Sbjct: 34454 gttgtacatccctgggagctgcacgttggtgggg 34487

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  244 bits (123), Expect = 1e-61
 Identities = 212/242 (87%)
 Strand = Plus / Plus

                                                                            
Query: 24       atggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcg 83
                |||||||| ||||||||| ||||||||||||||||||    ||||||   ||| ||||||
Sbjct: 28303827 atggattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcg 28303886

                                                                            
Query: 84       gtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaac 143
                ||  ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||
Sbjct: 28303887 gtgcggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaac 28303946

                                                                            
Query: 144      ttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtg 203
                ||||||||||| || |||||||| || || ||||| ||||| ||||| ||||| ||||||
Sbjct: 28303947 ttctccatacgcccgtcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtg 28304006

                                                                            
Query: 204      acgacgatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttg 263
                |||| |||||| ||||||||||| ||||||||||||||||| ||  ||||||||||||||
Sbjct: 28304007 acgatgatggggacacgggggttgtcctccttgttgtacatcccggggagctgcacgttg 28304066

                  
Query: 264      gt 265
                ||
Sbjct: 28304067 gt 28304068



 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                            
Query: 88       ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 147
                ||||||| ||| |||| || || || ||||| || ||||||||||||||||||||||| |
Sbjct: 28307595 ggaagatgcccctgcacacgccaatgcggtcctcgcgggtgggagcccagtagaacttgt 28307654

                    
Query: 148      ccat 151
                ||||
Sbjct: 28307655 ccat 28307658



 Score = 46.1 bits (23), Expect = 0.058
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 236      gttgtacatgccanggagctgcacgttggtgggg 269
                ||||||||| ||  ||||||||||||||||||||
Sbjct: 28307716 gttgtacatccctgggagctgcacgttggtgggg 28307749

---

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  244 bits (123), Expect = 1e-61
 Identities = 212/242 (87%)
 Strand = Plus / Plus

                                                                            
Query: 24       atggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcg 83
                |||||||| ||||||||| ||||||||||||||||||    ||||||   ||| ||||||
Sbjct: 28286276 atggattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcg 28286335

                                                                            
Query: 84       gtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaac 143
                ||  ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||
Sbjct: 28286336 gtgcggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaac 28286395

                                                                            
Query: 144      ttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtg 203
                ||||||||||| || |||||||| || || ||||| ||||| ||||| ||||| ||||||
Sbjct: 28286396 ttctccatacgcccgtcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtg 28286455

                                                                            
Query: 204      acgacgatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttg 263
                |||| |||||| ||||||||||| ||||||||||||||||| ||  ||||||||||||||
Sbjct: 28286456 acgatgatggggacacgggggttgtcctccttgttgtacatcccggggagctgcacgttg 28286515

                  
Query: 264      gt 265
                ||
Sbjct: 28286516 gt 28286517



 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                            
Query: 88       ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 147
                ||||||| ||| |||| || || || ||||| || ||||||||||||||||||||||| |
Sbjct: 28290044 ggaagatgcccctgcacacgccaatgcggtcctcgcgggtgggagcccagtagaacttgt 28290103

                    
Query: 148      ccat 151
                ||||
Sbjct: 28290104 ccat 28290107



 Score = 46.1 bits (23), Expect = 0.058
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 236      gttgtacatgccanggagctgcacgttggtgggg 269
                ||||||||| ||  ||||||||||||||||||||
Sbjct: 28290165 gttgtacatccctgggagctgcacgttggtgggg 28290198

---

>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds
          Length = 1436

 Score =  218 bits (110), Expect = 7e-54
 Identities = 223/261 (85%)
 Strand = Plus / Minus

                                                                       
Query: 9   gcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacgacagactcg 68
           |||||||| |||||||||||||| || |||||||||||||||| ||||| ||||  ||| 
Sbjct: 733 gcaccgaagaagtcaatggattggccggggaaggtgtcgacgagcttgatgacatcctcc 674

                                                                       
Query: 69  tcactgacattgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtg 128
           |    ||| ||||||| |  |||||||||  ||||||| ||||  ||||| || | ||||
Sbjct: 673 ttggggacgttgtcggacctgaagataccggtgcagacgccgacccggtcatccctggtg 614

                                                                       
Query: 129 ggagcccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgag 188
           ||||||||||||||||||||||||||||| |||||||| || || |||||||| || |||
Sbjct: 613 ggagcccagtagaacttctccatacgaccgtcacggatgaggggggcgtagagggtggag 554

                                                                       
Query: 189 aaatcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgtacatgcca 248
           || ||||| |||||||||| ||||||||| ||||||||||||| ||||||||||||||| 
Sbjct: 553 aagtcgttgccggtgacgatgatgggcacgcgggggttctcctgcttgttgtacatgccg 494

                                
Query: 249 nggagctgcacgttggtgggg 269
            ||||||| ||||||||||||
Sbjct: 493 gggagctggacgttggtgggg 473

---

>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds
          Length = 1597

 Score =  218 bits (110), Expect = 7e-54
 Identities = 223/261 (85%)
 Strand = Plus / Minus

                                                                       
Query: 9   gcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacgacagactcg 68
           |||||||| |||||||||||||| || |||||||||||||||| ||||| ||||  ||| 
Sbjct: 927 gcaccgaagaagtcaatggattggccggggaaggtgtcgacgagcttgatgacatcctcc 868

                                                                       
Query: 69  tcactgacattgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtg 128
           |    ||| ||||||| |  |||||||||  ||||||| ||||  ||||| || | ||||
Sbjct: 867 ttggggacgttgtcggacctgaagataccggtgcagacgccgacccggtcatccctggtg 808

                                                                       
Query: 129 ggagcccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgag 188
           ||||||||||||||||||||||||||||| |||||||| || || |||||||| || |||
Sbjct: 807 ggagcccagtagaacttctccatacgaccgtcacggatgaggggggcgtagagggtggag 748

                                                                       
Query: 189 aaatcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgtacatgcca 248
           || ||||| |||||||||| ||||||||| ||||||||||||| ||||||||||||||| 
Sbjct: 747 aagtcgttgccggtgacgatgatgggcacgcgggggttctcctgcttgttgtacatgccg 688

                                
Query: 249 nggagctgcacgttggtgggg 269
            ||||||| ||||||||||||
Sbjct: 687 gggagctggacgttggtgggg 667

---

>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds
          Length = 1656

 Score =  214 bits (108), Expect = 1e-52
 Identities = 170/191 (89%)
 Strand = Plus / Minus

                                                                        
Query: 78   ttgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccag 137
            ||||||||  ||||||| |||||||| || ||||| ||||| || |||||||| ||||||
Sbjct: 1128 ttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccag 1069

                                                                        
Query: 138  tagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgtta 197
            |||||||||||||| || || ||||||||||| |||||||| ||||||||||| ||||| 
Sbjct: 1068 tagaacttctccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtcgttg 1009

                                                                        
Query: 198  ccggtgacgacgatgggcacacgggggttctcctccttgttgtacatgccanggagctgc 257
            |||||||||| ||||||||| |||||||||||||||||||||||||| ||  ||||||||
Sbjct: 1008 ccggtgacgatgatgggcacgcgggggttctcctccttgttgtacatccccgggagctgc 949

                       
Query: 258  acgttggtggg 268
            |||||||||||
Sbjct: 948  acgttggtggg 938

---

>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds
          Length = 1674

 Score =  210 bits (106), Expect = 2e-51
 Identities = 222/261 (85%)
 Strand = Plus / Minus

                                                                        
Query: 9    gcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacgacagactcg 68
            |||||||| |||||||||||||| || |||||||||||||||| ||||| ||||  ||| 
Sbjct: 1034 gcaccgaagaagtcaatggattggccggggaaggtgtcgacgagcttgatgacatcctcc 975

                                                                        
Query: 69   tcactgacattgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtg 128
            |    ||| ||||||| |  |||||||||  ||||||| ||||  ||||| || | ||||
Sbjct: 974  ttggggacgttgtcggacctgaagataccggtgcagacgccgacccggtcatccctggtg 915

                                                                        
Query: 129  ggagcccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgag 188
            ||||||||||||||||||||||||||||| |||||||| || || |||||||| || |||
Sbjct: 914  ggagcccagtagaacttctccatacgaccgtcacggatgaggggggcgtagagggtggag 855

                                                                        
Query: 189  aaatcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgtacatgcca 248
            || ||||| |||||||||| ||||||||| ||||||||||| | ||||||||||||||| 
Sbjct: 854  aagtcgttgccggtgacgatgatgggcacgcgggggttctcttgcttgttgtacatgccg 795

                                 
Query: 249  nggagctgcacgttggtgggg 269
             ||||||| ||||||||||||
Sbjct: 794  gggagctggacgttggtgggg 774

---

>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds
          Length = 1494

 Score =  210 bits (106), Expect = 2e-51
 Identities = 222/261 (85%)
 Strand = Plus / Minus

                                                                       
Query: 9   gcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacgacagactcg 68
           |||||||| |||||||||||||| || |||||||||||||||| ||||| ||||  ||| 
Sbjct: 897 gcaccgaagaagtcaatggattggccggggaaggtgtcgacgagcttgatgacatcctcc 838

                                                                       
Query: 69  tcactgacattgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtg 128
           |    ||| ||||||| |  |||||||||  ||||||| ||||  ||||| || | ||||
Sbjct: 837 ttggggacgttgtcggacctgaagataccggtgcagacgccgacccggtcatccctggtg 778

                                                                       
Query: 129 ggagcccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgag 188
           ||||||||||||||||||||||||||||| |||||||| || || |||||||| || |||
Sbjct: 777 ggagcccagtagaacttctccatacgaccgtcacggatgaggggggcgtagagggtggag 718

                                                                       
Query: 189 aaatcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgtacatgcca 248
           || ||||| |||||||||| ||||||||| ||||||||||| | ||||||||||||||| 
Sbjct: 717 aagtcgttgccggtgacgatgatgggcacgcgggggttctcttgcttgttgtacatgccg 658

                                
Query: 249 nggagctgcacgttggtgggg 269
            ||||||| ||||||||||||
Sbjct: 657 gggagctggacgttggtgggg 637

---

>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase
           precursor, mRNA, partial cds
          Length = 1336

 Score =  188 bits (95), Expect = 6e-45
 Identities = 160/182 (87%)
 Strand = Plus / Minus

                                                                       
Query: 88  ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 147
           ||||||| ||||||||||| ||||| ||||| || |||||||| ||||||||||||||||
Sbjct: 574 ggaagatgcccttgcagacgccgatgcggtcctcgcgggtgggcgcccagtagaacttct 515

                                                                       
Query: 148 ccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacga 207
           |||| || || || ||||| || || ||||||||||| ||||| ||||| ||||||||||
Sbjct: 514 ccatgcggccgtcgcggatgagcggcgcgtagagcgtggagaagtcgttgccggtgacga 455

                                                                       
Query: 208 cgatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttggtgg 267
            ||||||||| |||||||| ||||||||||||||||| ||  ||||||||||||||||||
Sbjct: 454 tgatgggcacgcgggggttgtcctccttgttgtacatccccgggagctgcacgttggtgg 395

             
Query: 268 gg 269
           ||
Sbjct: 394 gg 393

---

>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase
           precursor (rca1) mRNA, complete cds
          Length = 1424

 Score =  188 bits (95), Expect = 6e-45
 Identities = 160/182 (87%)
 Strand = Plus / Minus

                                                                       
Query: 88  ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 147
           ||||||| ||||||||||| ||||| ||||| || |||||||| ||||||||||||||||
Sbjct: 969 ggaagatgcccttgcagacgccgatgcggtcctcgcgggtgggcgcccagtagaacttct 910

                                                                       
Query: 148 ccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacga 207
           |||| || || || ||||| || || ||||||||||| ||||| ||||| ||||||||||
Sbjct: 909 ccatgcggccgtcgcggatgagcggcgcgtagagcgtggagaagtcgttgccggtgacga 850

                                                                       
Query: 208 cgatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttggtgg 267
            ||||||||| |||||||| ||||||||||||||||| ||  ||||||||||||||||||
Sbjct: 849 tgatgggcacgcgggggttgtcctccttgttgtacatccccgggagctgcacgttggtgg 790

             
Query: 268 gg 269
           ||
Sbjct: 789 gg 788

---

>ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.2 mRNA, complete cds
          Length = 1815

 Score =  186 bits (94), Expect = 2e-44
 Identities = 156/177 (88%)
 Strand = Plus / Minus

                                                                        
Query: 89   gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 148
            |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 1134 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 1075

                                                                        
Query: 149  catacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgac 208
            |||||| ||||||||||| ||||||||||| || || |||||||||||||| |||   | 
Sbjct: 1074 catacgtccatcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaat 1015

                                                                     
Query: 209  gatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttggt 265
            |||||| ||||| | |||||| |||||||||||||| ||  ||||||| ||||||||
Sbjct: 1014 gatggggacacgtgcgttctcttccttgttgtacattcctgggagctggacgttggt 958

---

>ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.3 mRNA, complete cds
          Length = 1928

 Score =  186 bits (94), Expect = 2e-44
 Identities = 156/177 (88%)
 Strand = Plus / Minus

                                                                        
Query: 89   gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 148
            |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 1134 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 1075

                                                                        
Query: 149  catacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgac 208
            |||||| ||||||||||| ||||||||||| || || |||||||||||||| |||   | 
Sbjct: 1074 catacgtccatcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaat 1015

                                                                     
Query: 209  gatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttggt 265
            |||||| ||||| | |||||| |||||||||||||| ||  ||||||| ||||||||
Sbjct: 1014 gatggggacacgtgcgttctcttccttgttgtacattcctgggagctggacgttggt 958

---

>ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.1 mRNA, complete cds
          Length = 1833

 Score =  186 bits (94), Expect = 2e-44
 Identities = 156/177 (88%)
 Strand = Plus / Minus

                                                                        
Query: 89   gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 148
            |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 1163 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 1104

                                                                        
Query: 149  catacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgac 208
            |||||| ||||||||||| ||||||||||| || || |||||||||||||| |||   | 
Sbjct: 1103 catacgtccatcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaat 1044

                                                                     
Query: 209  gatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttggt 265
            |||||| ||||| | |||||| |||||||||||||| ||  ||||||| ||||||||
Sbjct: 1043 gatggggacacgtgcgttctcttccttgttgtacattcctgggagctggacgttggt 987

---

>gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890) unknown protein
            (At2g39730) mRNA, complete cds
          Length = 1697

 Score =  186 bits (94), Expect = 2e-44
 Identities = 156/177 (88%)
 Strand = Plus / Minus

                                                                        
Query: 89   gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 148
            |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 1045 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 986

                                                                        
Query: 149  catacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgac 208
            |||||| ||||||||||| ||||||||||| || || |||||||||||||| |||   | 
Sbjct: 985  catacgtccatcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaat 926

                                                                     
Query: 209  gatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttggt 265
            |||||| ||||| | |||||| |||||||||||||| ||  ||||||| ||||||||
Sbjct: 925  gatggggacacgtgcgttctcttccttgttgtacattcctgggagctggacgttggt 869

---

>gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, complete cds
          Length = 1809

 Score =  186 bits (94), Expect = 2e-44
 Identities = 219/261 (83%)
 Strand = Plus / Minus

                                                                        
Query: 9    gcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacgacagactcg 68
            |||||||| || ||||| ||||| || |||||||||||||||| |||||| ||    || 
Sbjct: 1164 gcaccgaagaaatcaatagattggccagggaaggtgtcgacgagcttgacaacgtggtcc 1105

                                                                        
Query: 69   tcactgacattgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtg 128
            |||   ||||||||||||  |||||||||  ||   |||||||||||||| |||||||||
Sbjct: 1104 tcaggaacattgtcggtcctgaagataccggtggcaacaccgatacggtcctcacgggtg 1045

                                                                        
Query: 129  ggagcccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgag 188
            |||||||||||||||||||||||||||||||||||||| || |||||||| |  || |||
Sbjct: 1044 ggagcccagtagaacttctccatacgaccatcacggataaggggagcgtacaaggtggag 985

                                                                        
Query: 189  aaatcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgtacatgcca 248
            || |||||||| |||||||  ||||| ||||||| |||||| | |||||||||||| |||
Sbjct: 984  aagtcgttaccagtgacgataatgggaacacgggcgttctcttgcttgttgtacatacca 925

                                 
Query: 249  nggagctgcacgttggtgggg 269
             |||| || || |||||||||
Sbjct: 924  gggagttggacattggtgggg 904

---

>gb|BT000613.1| Arabidopsis thaliana Rubsico activase  (At2g39730/T5I7.3) mRNA,
           complete cds
          Length = 1425

 Score =  186 bits (94), Expect = 2e-44
 Identities = 156/177 (88%)
 Strand = Plus / Minus

                                                                       
Query: 89  gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 148
           |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 960 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 901

                                                                       
Query: 149 catacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgac 208
           |||||| ||||||||||| ||||||||||| || || |||||||||||||| |||   | 
Sbjct: 900 catacgtccatcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaat 841

                                                                    
Query: 209 gatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttggt 265
           |||||| ||||| | |||||| |||||||||||||| ||  ||||||| ||||||||
Sbjct: 840 gatggggacacgtgcgttctcttccttgttgtacattcctgggagctggacgttggt 784

---

>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete
             sequence
          Length = 92624

 Score =  186 bits (94), Expect = 2e-44
 Identities = 156/177 (88%)
 Strand = Plus / Plus

                                                                         
Query: 89    gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 148
             |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 14154 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 14213

                                                                         
Query: 149   catacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgac 208
             |||||| ||||||||||| ||||||||||| || || |||||||||||||| |||   | 
Sbjct: 14214 catacgtccatcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaat 14273

                                                                      
Query: 209   gatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttggt 265
             |||||| ||||| | |||||| |||||||||||||| ||  ||||||| ||||||||
Sbjct: 14274 gatggggacacgtgcgttctcttccttgttgtacattcctgggagctggacgttggt 14330

---

>gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, complete cds
          Length = 1674

 Score =  186 bits (94), Expect = 2e-44
 Identities = 156/177 (88%)
 Strand = Plus / Minus

                                                                        
Query: 89   gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 148
            |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 1048 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 989

                                                                        
Query: 149  catacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgac 208
            |||||| ||||||||||| ||||||||||| || || |||||||||||||| |||   | 
Sbjct: 988  catacgtccatcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaat 929

                                                                     
Query: 209  gatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttggt 265
            |||||| ||||| | |||||| |||||||||||||| ||  ||||||| ||||||||
Sbjct: 928  gatggggacacgtgcgttctcttccttgttgtacattcctgggagctggacgttggt 872

---

>gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds
          Length = 1655

 Score =  186 bits (94), Expect = 2e-44
 Identities = 156/177 (88%)
 Strand = Plus / Minus

                                                                        
Query: 89   gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 148
            |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 1045 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 986

                                                                        
Query: 149  catacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgac 208
            |||||| ||||||||||| ||||||||||| || || |||||||||||||| |||   | 
Sbjct: 985  catacgtccatcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaat 926

                                                                     
Query: 209  gatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttggt 265
            |||||| ||||| | |||||| |||||||||||||| ||  ||||||| ||||||||
Sbjct: 925  gatggggacacgtgcgttctcttccttgttgtacattcctgggagctggacgttggt 869

---

>gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730/T5I7.3) mRNA, complete cds
          Length = 1674

 Score =  186 bits (94), Expect = 2e-44
 Identities = 156/177 (88%)
 Strand = Plus / Minus

                                                                        
Query: 89   gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 148
            |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 1048 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 989

                                                                        
Query: 149  catacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgac 208
            |||||| ||||||||||| ||||||||||| || || |||||||||||||| |||   | 
Sbjct: 988  catacgtccatcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaat 929

                                                                     
Query: 209  gatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttggt 265
            |||||| ||||| | |||||| |||||||||||||| ||  ||||||| ||||||||
Sbjct: 928  gatggggacacgtgcgttctcttccttgttgtacattcctgggagctggacgttggt 872

---

>gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete sequence
          Length = 1787

 Score =  186 bits (94), Expect = 2e-44
 Identities = 156/177 (88%)
 Strand = Plus / Minus

                                                                        
Query: 89   gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 148
            |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 1163 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 1104

                                                                        
Query: 149  catacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgac 208
            |||||| ||||||||||| ||||||||||| || || |||||||||||||| |||   | 
Sbjct: 1103 catacgtccatcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaat 1044

                                                                     
Query: 209  gatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttggt 265
            |||||| ||||| | |||||| |||||||||||||| ||  ||||||| ||||||||
Sbjct: 1043 gatggggacacgtgcgttctcttccttgttgtacattcctgggagctggacgttggt 987

---

>gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphosphate carboxylase/oxygenase
            activase (rca) gene, complete cds
          Length = 3974

 Score =  186 bits (94), Expect = 2e-44
 Identities = 156/177 (88%)
 Strand = Plus / Minus

                                                                        
Query: 89   gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 148
            |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 3129 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 3070

                                                                        
Query: 149  catacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgac 208
            |||||| ||||||||||| ||||||||||| || || |||||||||||||| |||   | 
Sbjct: 3069 catacgtccatcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaat 3010

                                                                     
Query: 209  gatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttggt 265
            |||||| ||||| | |||||| |||||||||||||| ||  ||||||| ||||||||
Sbjct: 3009 gatggggacacgtgcgttctcttccttgttgtacattcctgggagctggacgttggt 2953

---

>gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds
          Length = 1693

 Score =  178 bits (90), Expect = 6e-42
 Identities = 155/177 (87%)
 Strand = Plus / Minus

                                                                        
Query: 89   gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 148
            |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 1037 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 978

                                                                        
Query: 149  catacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgac 208
            |||||| ||||||||||| ||||||||||| || || |||||||||||||| |||   | 
Sbjct: 977  catacgtccatcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaat 918

                                                                     
Query: 209  gatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttggt 265
            |||||| ||||| | |||||| |||||||||||||| ||  | ||||| ||||||||
Sbjct: 917  gatggggacacgtgcgttctcttccttgttgtacattcctggaagctggacgttggt 861

---

>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B
           (RcaB) mRNA, complete cds; nuclear gene for chloroplast
           product
          Length = 1525

 Score =  174 bits (88), Expect = 9e-41
 Identities = 165/191 (86%)
 Strand = Plus / Minus

                                                                       
Query: 78  ttgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccag 137
           ||||||||  ||||||| |||||||| || ||||| ||||| || |||||||| ||||||
Sbjct: 978 ttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcccgggtgggcgcccag 919

                                                                       
Query: 138 tagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgtta 197
           |||||||||||||| || || || ||||| || || ||||| ||||||||||| ||||| 
Sbjct: 918 tagaacttctccatgcggccgtcccggatgaggggcgcgtacagcgtcgagaagtcgttg 859

                                                                       
Query: 198 ccggtgacgacgatgggcacacgggggttctcctccttgttgtacatgccanggagctgc 257
           |||||||||| ||||||||| || ||||||||||||||||||||||| ||  ||| ||||
Sbjct: 858 ccggtgacgatgatgggcacgcgtgggttctcctccttgttgtacatccccgggaactgc 799

                      
Query: 258 acgttggtggg 268
           |||||||||||
Sbjct: 798 acgttggtggg 788

---

>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1694

 Score =  172 bits (87), Expect = 4e-40
 Identities = 158/182 (86%)
 Strand = Plus / Minus

                                                                        
Query: 75   acattgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcc 134
            |||||||| |||  ||| ||||||||||||||||| |||||||| || | ||| ||||||
Sbjct: 1043 acattgtcagtcctgaaaatacccttgcagacaccaatacggtcttccctggtaggagcc 984

                                                                        
Query: 135  cagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcg 194
            |||||||| || |||||||||||||||||||| ||||||||||| |  |||||||| |||
Sbjct: 983  cagtagaatttttccatacgaccatcacggataagaggagcgtacaatgtcgagaagtcg 924

                                                                        
Query: 195  ttaccggtgacgacgatgggcacacgggggttctcctccttgttgtacatgccanggagc 254
            ||||| ||||| | ||| |||||||| |||||||| |||||||||||||| ||| |||||
Sbjct: 923  ttaccagtgacaatgataggcacacgagggttctcttccttgttgtacataccagggagc 864

              
Query: 255  tg 256
            ||
Sbjct: 863  tg 862

---

>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase 2 mRNA, partial cds
          Length = 1462

 Score =  172 bits (87), Expect = 4e-40
 Identities = 164/190 (86%)
 Strand = Plus / Minus

                                                                       
Query: 80  gtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagta 139
           |||||||  ||| ||||| ||||| ||||||||||||||||| |  || || ||||||||
Sbjct: 853 gtcggtcctgaaaatacctttgcaaacaccgatacggtcgtccctagttggtgcccagta 794

                                                                       
Query: 140 gaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttacc 199
            || |||||||||||||| |||||||| |||||||| || || || ||||||||||||||
Sbjct: 793 aaatttctccatacgaccgtcacggatgagaggagcatacagtgtggagaaatcgttacc 734

                                                                       
Query: 200 ggtgacgacgatgggcacacgggggttctcctccttgttgtacatgccanggagctgcac 259
            ||||||| |||||| |||||||||||||| |||||||||||||| ||  ||||||| ||
Sbjct: 733 agtgacgatgatggggacacgggggttctcttccttgttgtacataccggggagctggac 674

                     
Query: 260 gttggtgggg 269
           ||||||||||
Sbjct: 673 gttggtgggg 664



 Score = 46.1 bits (23), Expect = 0.058
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 9   gcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacga 51
           |||||||| || || |||||||| || ||||||||||||||||
Sbjct: 924 gcaccgaagaaatcgatggattggccggggaaggtgtcgacga 882

---

>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            mRNA
          Length = 1853

 Score =  168 bits (85), Expect = 6e-39
 Identities = 130/145 (89%)
 Strand = Plus / Minus

                                                                        
Query: 100  tgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccat 159
            ||||||| || ||||| || || ||||||||||||||||||||||||||||||||||| |
Sbjct: 1034 tgcagactccaatacgatcttcgcgggtgggagcccagtagaacttctccatacgaccgt 975

                                                                        
Query: 160  cacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggcacac 219
            ||||||| ||||||||||| |  || |||||||||||||||||||| | ||| || ||||
Sbjct: 974  cacggatgagaggagcgtacaatgttgagaaatcgttaccggtgacaatgattgggacac 915

                                     
Query: 220  gggggttctcctccttgttgtacat 244
            |||||||||||||||||||||||||
Sbjct: 914  gggggttctcctccttgttgtacat 890

---

>gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 genomic sequence
          Length = 633

 Score =  165 bits (83), Expect = 9e-38
 Identities = 157/182 (86%)
 Strand = Plus / Minus

                                                                       
Query: 88  ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 147
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 529 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 470

                                                                       
Query: 148 ccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacga 207
           |||| || || |||||||| || || ||||| ||||| ||||| ||||| ||||||||||
Sbjct: 469 ccatgcgcccgtcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacga 410

                                                                       
Query: 208 cgatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttggtgg 267
            |||||||||||| ||||| ||| ||||| ||||||| ||  ||||||||||||||||||
Sbjct: 409 tgatgggcacacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtgg 350

             
Query: 268 gg 269
           ||
Sbjct: 349 gg 348

---

>gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 genomic sequence
          Length = 635

 Score =  165 bits (83), Expect = 9e-38
 Identities = 157/182 (86%)
 Strand = Plus / Minus

                                                                       
Query: 88  ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 147
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472

                                                                       
Query: 148 ccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacga 207
           |||| || || |||||||| || || ||||| ||||| ||||| ||||| ||||||||||
Sbjct: 471 ccatgcgcccgtcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacga 412

                                                                       
Query: 208 cgatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttggtgg 267
            |||||||||||| ||||| ||| ||||| ||||||| ||  ||||||||||||||||||
Sbjct: 411 tgatgggcacacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtgg 352

             
Query: 268 gg 269
           ||
Sbjct: 351 gg 350

---

>gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 genomic sequence
          Length = 639

 Score =  165 bits (83), Expect = 9e-38
 Identities = 157/182 (86%)
 Strand = Plus / Minus

                                                                       
Query: 88  ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 147
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 535 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 476

                                                                       
Query: 148 ccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacga 207
           |||| || || |||||||| || || ||||| ||||| ||||| ||||| ||||||||||
Sbjct: 475 ccatgcgcccgtcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacga 416

                                                                       
Query: 208 cgatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttggtgg 267
            |||||||||||| ||||| ||| ||||| ||||||| ||  ||||||||||||||||||
Sbjct: 415 tgatgggcacacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtgg 356

             
Query: 268 gg 269
           ||
Sbjct: 355 gg 354

---

>gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 genomic sequence
          Length = 635

 Score =  165 bits (83), Expect = 9e-38
 Identities = 157/182 (86%)
 Strand = Plus / Minus

                                                                       
Query: 88  ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 147
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472

                                                                       
Query: 148 ccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacga 207
           |||| || || |||||||| || || ||||| ||||| ||||| ||||| ||||||||||
Sbjct: 471 ccatgcgcccgtcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacga 412

                                                                       
Query: 208 cgatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttggtgg 267
            |||||||||||| ||||| ||| ||||| ||||||| ||  ||||||||||||||||||
Sbjct: 411 tgatgggcacacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtgg 352

             
Query: 268 gg 269
           ||
Sbjct: 351 gg 350

---

>gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 genomic sequence
          Length = 635

 Score =  165 bits (83), Expect = 9e-38
 Identities = 157/182 (86%)
 Strand = Plus / Minus

                                                                       
Query: 88  ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 147
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472

                                                                       
Query: 148 ccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacga 207
           |||| || || |||||||| || || ||||| ||||| ||||| ||||| ||||||||||
Sbjct: 471 ccatgcgcccgtcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacga 412

                                                                       
Query: 208 cgatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttggtgg 267
            |||||||||||| ||||| ||| ||||| ||||||| ||  ||||||||||||||||||
Sbjct: 411 tgatgggcacacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtgg 352

             
Query: 268 gg 269
           ||
Sbjct: 351 gg 350

---

>gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 genomic sequence
          Length = 635

 Score =  165 bits (83), Expect = 9e-38
 Identities = 157/182 (86%)
 Strand = Plus / Minus

                                                                       
Query: 88  ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 147
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472

                                                                       
Query: 148 ccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacga 207
           |||| || || |||||||| || || ||||| ||||| ||||| ||||| ||||||||||
Sbjct: 471 ccatgcgcccgtcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacga 412

                                                                       
Query: 208 cgatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttggtgg 267
            |||||||||||| ||||| ||| ||||| ||||||| ||  ||||||||||||||||||
Sbjct: 411 tgatgggcacacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtgg 352

             
Query: 268 gg 269
           ||
Sbjct: 351 gg 350

---

>gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 genomic sequence
          Length = 635

 Score =  165 bits (83), Expect = 9e-38
 Identities = 157/182 (86%)
 Strand = Plus / Minus

                                                                       
Query: 88  ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 147
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472

                                                                       
Query: 148 ccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacga 207
           |||| || || |||||||| || || ||||| ||||| ||||| ||||| ||||||||||
Sbjct: 471 ccatgcgcccgtcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacga 412

                                                                       
Query: 208 cgatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttggtgg 267
            |||||||||||| ||||| ||| ||||| ||||||| ||  ||||||||||||||||||
Sbjct: 411 tgatgggcacacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtgg 352

             
Query: 268 gg 269
           ||
Sbjct: 351 gg 350

---

>gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 genomic sequence
          Length = 637

 Score =  165 bits (83), Expect = 9e-38
 Identities = 157/182 (86%)
 Strand = Plus / Minus

                                                                       
Query: 88  ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 147
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 533 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 474

                                                                       
Query: 148 ccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacga 207
           |||| || || |||||||| || || ||||| ||||| ||||| ||||| ||||||||||
Sbjct: 473 ccatgcgcccgtcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacga 414

                                                                       
Query: 208 cgatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttggtgg 267
            |||||||||||| ||||| ||| ||||| ||||||| ||  ||||||||||||||||||
Sbjct: 413 tgatgggcacacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtgg 354

             
Query: 268 gg 269
           ||
Sbjct: 353 gg 352

---

>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
            activase 1 mRNA, complete cds
          Length = 1559

 Score =  159 bits (80), Expect = 6e-36
 Identities = 166/195 (85%)
 Strand = Plus / Minus

                                                                        
Query: 75   acattgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcc 134
            ||||||||||||  ||| |||||  |||| |||||||| |  || || | |||||| |||
Sbjct: 1043 acattgtcggtcctgaaaatacctgtgcaaacaccgatcctatcttccctggtgggtgcc 984

                                                                        
Query: 135  cagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcg 194
            ||||| ||||||||||||||||| |||||||| || || ||||| |||||||||||||||
Sbjct: 983  cagtaaaacttctccatacgaccgtcacggatgagcggcgcgtacagcgtcgagaaatcg 924

                                                                        
Query: 195  ttaccggtgacgacgatgggcacacgggggttctcctccttgttgtacatgccanggagc 254
            ||||||||||| | ||| || ||||| |||||||| |||||||||||||| ||  |||||
Sbjct: 923  ttaccggtgacaatgatcggaacacgagggttctcttccttgttgtacataccggggagc 864

                           
Query: 255  tgcacgttggtgggg 269
            || ||||||||||||
Sbjct: 863  tgaacgttggtgggg 849



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 40/42 (95%)
 Strand = Plus / Minus

                                                      
Query: 5    cagagcaccgaaaaagtcaatggattgtcctgggaaggtgtc 46
            ||||||||||||||||||||||||||| || |||||||||||
Sbjct: 1113 cagagcaccgaaaaagtcaatggattggcccgggaaggtgtc 1072

---

>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence
          Length = 1750

 Score =  159 bits (80), Expect = 6e-36
 Identities = 155/182 (85%)
 Strand = Plus / Minus

                                                                       
Query: 88  ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 147
           ||||||| ||||||||||| ||||| ||||| || |||||||| ||||||||||||||||
Sbjct: 969 ggaagatgcccttgcagacgccgatgcggtcctcgcgggtgggcgcccagtagaacttct 910

                                                                       
Query: 148 ccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacga 207
           |||| || || || ||||| || || ||||||||||| ||||| ||||| ||||||||||
Sbjct: 909 ccatgcggccgtcgcggatgagcggcgcgtagagcgtggagaagtcgttgccggtgacga 850

                                                                       
Query: 208 cgatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttggtgg 267
            ||||||||| |     || ||||||||||||||||| ||  ||||||||||||||||||
Sbjct: 849 tgatgggcacgcnnnnnttgtcctccttgttgtacatccccgggagctgcacgttggtgg 790

             
Query: 268 gg 269
           ||
Sbjct: 789 gg 788

---

>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase alpha 2 mRNA, complete cds
          Length = 1433

 Score =  157 bits (79), Expect = 2e-35
 Identities = 162/190 (85%)
 Strand = Plus / Minus

                                                                       
Query: 80  gtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagta 139
           |||||||  ||| ||||| ||||| ||||||| ||||||||| |  || || ||||||||
Sbjct: 852 gtcggtcctgaaaatacctttgcaaacaccgacacggtcgtccctagttggtgcccagta 793

                                                                       
Query: 140 gaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttacc 199
            || |||||||||||||| |||||||| |||||||| || || || ||||||||||||||
Sbjct: 792 aaatttctccatacgaccgtcacggatgagaggagcatacagtgtggagaaatcgttacc 733

                                                                       
Query: 200 ggtgacgacgatgggcacacgggggttctcctccttgttgtacatgccanggagctgcac 259
            |||||||  ||||| |||||||||||||| |||||||||||||| ||  ||||||| ||
Sbjct: 732 agtgacgataatggggacacgggggttctcttccttgttgtacataccggggagctggac 673

                     
Query: 260 gttggtgggg 269
           ||||||||||
Sbjct: 672 gttggtgggg 663



 Score = 46.1 bits (23), Expect = 0.058
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 9   gcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacga 51
           |||||||| || || |||||||| || ||||||||||||||||
Sbjct: 923 gcaccgaagaaatcgatggattggccggggaaggtgtcgacga 881

---

>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence
          Length = 619

 Score =  157 bits (79), Expect = 2e-35
 Identities = 156/182 (85%)
 Strand = Plus / Minus

                                                                       
Query: 88  ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 147
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 515 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 456

                                                                       
Query: 148 ccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacga 207
           |||| || || || || || || || ||||| ||||| ||||| ||||| ||||||||||
Sbjct: 455 ccatgcgcccgtcgcgaatgagcggcgcgtacagcgtggagaagtcgttgccggtgacga 396

                                                                       
Query: 208 cgatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttggtgg 267
           ||||||||||||| ||||| ||| ||||| ||||||| ||  ||||||||||||||||||
Sbjct: 395 cgatgggcacacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtgg 336

             
Query: 268 gg 269
           ||
Sbjct: 335 gg 334

---

>gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 genomic sequence
          Length = 637

 Score =  157 bits (79), Expect = 2e-35
 Identities = 156/182 (85%)
 Strand = Plus / Minus

                                                                       
Query: 88  ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 147
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 533 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 474

                                                                       
Query: 148 ccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacga 207
           |||| || || || ||||| || || ||||| ||||| ||||| ||||| ||||||||||
Sbjct: 473 ccatgcgcccgtcgcggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacga 414

                                                                       
Query: 208 cgatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttggtgg 267
            |||||||||||| ||||| ||| ||||| ||||||| ||  ||||||||||||||||||
Sbjct: 413 tgatgggcacacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtgg 354

             
Query: 268 gg 269
           ||
Sbjct: 353 gg 352

---

>gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 genomic sequence
          Length = 635

 Score =  157 bits (79), Expect = 2e-35
 Identities = 156/182 (85%)
 Strand = Plus / Minus

                                                                       
Query: 88  ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 147
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472

                                                                       
Query: 148 ccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacga 207
           |||| || || || ||||| || || ||||| ||||| ||||| ||||| ||||||||||
Sbjct: 471 ccatgcgcccgtcgcggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacga 412

                                                                       
Query: 208 cgatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttggtgg 267
            |||||||||||| ||||| ||| ||||| ||||||| ||  ||||||||||||||||||
Sbjct: 411 tgatgggcacacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtgg 352

             
Query: 268 gg 269
           ||
Sbjct: 351 gg 350

---

>gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 genomic sequence
          Length = 633

 Score =  157 bits (79), Expect = 2e-35
 Identities = 156/182 (85%)
 Strand = Plus / Minus

                                                                       
Query: 88  ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 147
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 529 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 470

                                                                       
Query: 148 ccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacga 207
           |||| || || || ||||| || || ||||| ||||| ||||| ||||| ||||||||||
Sbjct: 469 ccatgcgcccgtcgcggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacga 410

                                                                       
Query: 208 cgatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttggtgg 267
            |||||||||||| ||||| ||| ||||| ||||||| ||  ||||||||||||||||||
Sbjct: 409 tgatgggcacacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtgg 350

             
Query: 268 gg 269
           ||
Sbjct: 349 gg 348

---

>gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 genomic sequence
          Length = 633

 Score =  157 bits (79), Expect = 2e-35
 Identities = 156/182 (85%)
 Strand = Plus / Minus

                                                                       
Query: 88  ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 147
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 529 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 470

                                                                       
Query: 148 ccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacga 207
           |||| || || || ||||| || || ||||| ||||| ||||| ||||| ||||||||||
Sbjct: 469 ccatgcgcccgtcgcggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacga 410

                                                                       
Query: 208 cgatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttggtgg 267
            |||||||||||| ||||| ||| ||||| ||||||| ||  ||||||||||||||||||
Sbjct: 409 tgatgggcacacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtgg 350

             
Query: 268 gg 269
           ||
Sbjct: 349 gg 348

---

>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence
          Length = 627

 Score =  157 bits (79), Expect = 2e-35
 Identities = 156/182 (85%)
 Strand = Plus / Minus

                                                                       
Query: 88  ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 147
           ||||||| |||||||| || ||||| ||||| || |||||||| |||||||||||||| |
Sbjct: 523 ggaagatgcccttgcacacgccgatgcggtcctcccgggtgggcgcccagtagaacttgt 464

                                                                       
Query: 148 ccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacga 207
           |||| || || || ||||| || || ||||| ||||| ||||| ||||| ||||||||||
Sbjct: 463 ccatgcgcccgtcgcggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacga 404

                                                                       
Query: 208 cgatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttggtgg 267
           ||||||||||||| ||||| ||| ||||| ||||||| ||  ||||||||||||||||||
Sbjct: 403 cgatgggcacacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtgg 344

             
Query: 268 gg 269
           ||
Sbjct: 343 gg 342

---

>gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 genomic sequence
          Length = 635

 Score =  157 bits (79), Expect = 2e-35
 Identities = 156/182 (85%)
 Strand = Plus / Minus

                                                                       
Query: 88  ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 147
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472

                                                                       
Query: 148 ccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacga 207
           |||| || || || ||||| || || ||||| ||||| ||||| ||||| ||||||||||
Sbjct: 471 ccatgcgcccgtcgcggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacga 412

                                                                       
Query: 208 cgatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttggtgg 267
            |||||||||||| ||||| ||| ||||| ||||||| ||  ||||||||||||||||||
Sbjct: 411 tgatgggcacacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtgg 352

             
Query: 268 gg 269
           ||
Sbjct: 351 gg 350

---

>gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genomic sequence
          Length = 639

 Score =  157 bits (79), Expect = 2e-35
 Identities = 156/182 (85%)
 Strand = Plus / Minus

                                                                       
Query: 88  ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 147
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 535 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 476

                                                                       
Query: 148 ccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacga 207
           |||| || || || ||||| || || ||||| ||||| ||||| ||||| ||||||||||
Sbjct: 475 ccatgcgcccgtcgcggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacga 416

                                                                       
Query: 208 cgatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttggtgg 267
            |||||||||||| ||||| ||| ||||| ||||||| ||  ||||||||||||||||||
Sbjct: 415 tgatgggcacacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtgg 356

             
Query: 268 gg 269
           ||
Sbjct: 355 gg 354

---

>gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1) mRNA, complete cds
          Length = 1627

 Score =  155 bits (78), Expect = 9e-35
 Identities = 161/189 (85%)
 Strand = Plus / Minus

                                                                        
Query: 81   tcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtag 140
            |||||| |||| || |||||||| ||||| || ||||| || |  || || |||||||||
Sbjct: 1042 tcggtccggaaaattcccttgcaaacaccaatgcggtcttcccttgttggtgcccagtag 983

                                                                        
Query: 141  aacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccg 200
            |||||||||||||||||||||||||| |||||||| || || || |||||||||||||| 
Sbjct: 982  aacttctccatacgaccatcacggatgagaggagcataaagtgttgagaaatcgttacca 923

                                                                        
Query: 201  gtgacgacgatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacg 260
            ||||| | |||||||||||||| ||| || |||||||||||||| ||| | |||||||| 
Sbjct: 922  gtgacaatgatgggcacacgggcgttatcttccttgttgtacataccaggaagctgcaca 863

                     
Query: 261  ttggtgggg 269
            || ||||||
Sbjct: 862  tttgtgggg 854

---

>gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/oxygenase activase
            {alternatively spliced} [spinach, Genomic, 3691 nt]
          Length = 3691

 Score =  153 bits (77), Expect = 3e-34
 Identities = 133/152 (87%)
 Strand = Plus / Minus

                                                                        
Query: 102  cagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccatca 161
            |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2813 cagacaccaatacggtcctcacgggtgggagcccagtagaacttctccatacgaccatca 2754

                                                                        
Query: 162  cggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggcacacgg 221
            ||||| || |||||||| |  || |||||||||||||| || || | |||||| ||||||
Sbjct: 2753 cggataaggggagcgtacaaggtggagaaatcgttaccagtaacaatgatggggacacgg 2694

                                            
Query: 222  gggttctcctccttgttgtacatgccanggag 253
            |  || |||| |||||||||||| ||| ||||
Sbjct: 2693 gcattgtcctgcttgttgtacataccagggag 2662

---

>gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds
          Length = 1832

 Score =  153 bits (77), Expect = 3e-34
 Identities = 133/152 (87%)
 Strand = Plus / Minus

                                                                        
Query: 102  cagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccatca 161
            |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1185 cagacaccaatacggtcctcacgggtgggagcccagtagaacttctccatacgaccatca 1126

                                                                        
Query: 162  cggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggcacacgg 221
            ||||| || |||||||| |  || |||||||||||||| || || | |||||| ||||||
Sbjct: 1125 cggataaggggagcgtacaaggtggagaaatcgttaccagtaacaatgatggggacacgg 1066

                                            
Query: 222  gggttctcctccttgttgtacatgccanggag 253
            |  || |||| |||||||||||| ||| ||||
Sbjct: 1065 gcattgtcctgcttgttgtacataccagggag 1034



 Score = 40.1 bits (20), Expect = 3.6
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 12   ccgaaaaagtcaatggattgtcctgggaaggtgtcgacga 51
            ||||||||||| || |||||||| ||||||| ||| ||||
Sbjct: 1275 ccgaaaaagtcgatagattgtccagggaaggcgtcaacga 1236

---

>gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA, complete cds; nuclear
           gene for chloroplast product
          Length = 1671

 Score =  145 bits (73), Expect = 8e-32
 Identities = 114/128 (89%)
 Strand = Plus / Minus

                                                                       
Query: 132 gcccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaa 191
           ||||||||||||||||||||||| |||||||| || |||||||| || ||||| ||||||
Sbjct: 995 gcccagtagaacttctccatacgcccatcacgaatgagaggagcatacagcgttgagaaa 936

                                                                       
Query: 192 tcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgtacatgccangg 251
           || ||||||||||| | |||||||||||||| |||||| |||||||||||||| ||| | 
Sbjct: 935 tcattaccggtgacaatgatgggcacacgggcgttctcttccttgttgtacataccagga 876

                   
Query: 252 agctgcac 259
           ||||||||
Sbjct: 875 agctgcac 868

---

>gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, partial cds
          Length = 1063

 Score =  141 bits (71), Expect = 1e-30
 Identities = 145/170 (85%)
 Strand = Plus / Minus

                                                                       
Query: 100 tgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccat 159
           |||||||||| ||||| || || |  || |||||||||||||||||||||||||||||||
Sbjct: 456 tgcagacaccaatacgatcttctctagtaggagcccagtagaacttctccatacgaccat 397

                                                                       
Query: 160 cacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggcacac 219
           ||||||| |||||||| || || || |||||||| ||||||||||| | |||||||||||
Sbjct: 396 cacggatgagaggagcataaagtgttgagaaatcattaccggtgacaatgatgggcacac 337

                                                             
Query: 220 gggggttctcctccttgttgtacatgccanggagctgcacgttggtgggg 269
           | |  || || |||||||||||||| ||| |||| || || |||||||||
Sbjct: 336 gagcattgtcttccttgttgtacataccagggagttggacattggtgggg 287



 Score = 44.1 bits (22), Expect = 0.23
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 9   gcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgac 58
           |||||||| || || |||||||| || ||||||||||| || ||||||||
Sbjct: 547 gcaccgaagaaatcgatggattggccagggaaggtgtcaacaatcttgac 498

---

>gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bisphosphate carboxylase
           activase (Rca) gene, partial sequence
          Length = 648

 Score =  137 bits (69), Expect = 2e-29
 Identities = 161/192 (83%)
 Strand = Plus / Minus

                                                                       
Query: 74  gacattgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagc 133
           ||||||||| |||  |||||||||  |||| ||||| |||||||| ||||| ||||| ||
Sbjct: 248 gacattgtcagtcctgaagataccagtgcaaacaccaatacggtcctcacgagtgggtgc 189

                                                                       
Query: 134 ccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatc 193
           ||||||||| ||||||||||||||||||||||| |||||||| || |  || ||||| ||
Sbjct: 188 ccagtagaatttctccatacgaccatcacggatgagaggagcatacaaggtagagaagtc 129

                                                                       
Query: 194 gttaccggtgacgacgatgggcacacgggggttctcctccttgttgtacatgccanggag 253
           |||||| || |||| |||||| ||||| |  || |||| |||||||||||| ||| ||||
Sbjct: 128 gttaccagtaacgatgatgggtacacgagcattgtcctgcttgttgtacataccagggag 69

                       
Query: 254 ctgcacgttggt 265
           ||| || |||||
Sbjct: 68  ctggacattggt 57

---

>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1724

 Score =  133 bits (67), Expect = 3e-28
 Identities = 135/158 (85%)
 Strand = Plus / Minus

                                                                        
Query: 99   ttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgacca 158
            ||||||||||| |||||||| || | |||||| ||||||||||| ||||||||||| |||
Sbjct: 1019 ttgcagacaccaatacggtcctccctggtgggtgcccagtagaatttctccatacggcca 960

                                                                        
Query: 159  tcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggcaca 218
            |||||||| ||||| || || |  || ||||| |||||||| ||||| | |||||| |||
Sbjct: 959  tcacggataagaggggcatacaatgttgagaagtcgttaccagtgacaatgatgggaaca 900

                                                  
Query: 219  cgggggttctcctccttgttgtacatgccanggagctg 256
            || |||||||| |||||||||||||||||| | |||||
Sbjct: 899  cgagggttctcttccttgttgtacatgccaggaagctg 862

---

>gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence
          Length = 253

 Score =  133 bits (67), Expect = 3e-28
 Identities = 124/143 (86%)
 Strand = Plus / Minus

                                                                       
Query: 100 tgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccat 159
           |||||||||| ||||| ||||| ||||| || ||||||||||| ||||||||||||||||
Sbjct: 143 tgcagacaccaatacgatcgtcgcgggttggtgcccagtagaatttctccatacgaccat 84

                                                                       
Query: 160 cacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggcacac 219
           ||||||| || ||||| || |  || |||||||| ||||||||||| | || ||||||||
Sbjct: 83  cacggataaggggagcatacaaggtggagaaatcattaccggtgacaatgacgggcacac 24

                                  
Query: 220 gggggttctcctccttgttgtac 242
           |||||||||| || |||||||||
Sbjct: 23  gggggttctcttctttgttgtac 1

---

>gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precursor, gene, partial cds
          Length = 1216

 Score =  131 bits (66), Expect = 1e-27
 Identities = 149/177 (84%)
 Strand = Plus / Minus

                                                                       
Query: 89  gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 148
           |||||||||  |||||||||| || ||||| || | |||||| ||||||||||| |||||
Sbjct: 872 gaagataccagtgcagacaccaattcggtcttctctggtgggcgcccagtagaatttctc 813

                                                                       
Query: 149 catacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgac 208
           ||||||||||||||| || ||||||||||| |  |||||||| || ||||| ||||||| 
Sbjct: 812 catacgaccatcacgaatgagaggagcgtacaatgtcgagaagtcattacctgtgacgat 753

                                                                    
Query: 209 gatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttggt 265
           ||| || ||||| || ||||| |||||||||||||| ||  ||||||| || |||||
Sbjct: 752 gatcggtacacgtggattctcttccttgttgtacatacccgggagctgaacattggt 696

---

>gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precursor, mRNA, complete cds
          Length = 1634

 Score =  131 bits (66), Expect = 1e-27
 Identities = 149/177 (84%)
 Strand = Plus / Minus

                                                                        
Query: 89   gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 148
            |||||||||  |||||||||| || ||||| || | |||||| ||||||||||| |||||
Sbjct: 1045 gaagataccagtgcagacaccaattcggtcttctctggtgggcgcccagtagaatttctc 986

                                                                        
Query: 149  catacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgac 208
            ||||||||||||||| || ||||||||||| |  |||||||| || ||||| ||||||| 
Sbjct: 985  catacgaccatcacgaatgagaggagcgtacaatgtcgagaagtcattacctgtgacgat 926

                                                                     
Query: 209  gatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttggt 265
            ||| || ||||| || ||||| |||||||||||||| ||  ||||||| || |||||
Sbjct: 925  gatcggtacacgtggattctcttccttgttgtacatacccgggagctgaacattggt 869

---

>gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase pseudogene, partial sequence
          Length = 472

 Score =  131 bits (66), Expect = 1e-27
 Identities = 110/125 (88%)
 Strand = Plus / Minus

                                                                       
Query: 129 ggagcccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgag 188
           ||||||||||||||||| |||||||||||||| ||||| || ||||| || || |  |||
Sbjct: 419 ggagcccagtagaacttttccatacgaccatcgcggataaggggagcatatagtgctgag 360

                                                                       
Query: 189 aaatcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgtacatgcca 248
           |||||||| || ||||||| ||||||||||||||||||||||||||||| |||||| |||
Sbjct: 359 aaatcgtttcctgtgacgatgatgggcacacgggggttctcctccttgtcgtacattcca 300

                
Query: 249 nggag 253
            ||||
Sbjct: 299 gggag 295

---

>emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphate carboxylase activase
           (pTA1.1)
          Length = 1011

 Score =  105 bits (53), Expect = 7e-20
 Identities = 202/252 (80%)
 Strand = Plus / Minus

                                                                       
Query: 5   cagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacgacaga 64
           ||||||||| || |||||||| |||||||| |||||||| ||||| ||||| || |||| 
Sbjct: 435 cagagcaccaaagaagtcaatagattgtccagggaaggtatcgacaatctttacaacagc 376

                                                                       
Query: 65  ctcgtcactgacattgtcggtctggaagatacccttgcagacaccgatacggtcgtcacg 124
            || |||   || |||||||||  ||| ||||||||||| ||||| || |  || || | 
Sbjct: 375 ttcctcaggcacgttgtcggtcctgaaaatacccttgcaaacaccaattctatcttccct 316

                                                                       
Query: 125 ggtgggagcccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgt 184
            || || ||||| ||||||||||||||||||||||||||||| |||||||| || |  ||
Sbjct: 315 agttggtgcccaatagaacttctccatacgaccatcacggataagaggagcatacaatgt 256

                                                                       
Query: 185 cgagaaatcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgtacat 244
            ||||| |||||||| ||||| |  ||||| || | || |||||| | ||||||||||||
Sbjct: 255 ggagaagtcgttaccagtgacaataatggggaccctggcgttctcttgcttgttgtacat 196

                       
Query: 245 gccanggagctg 256
            ||  |||||||
Sbjct: 195 accggggagctg 184

---

>emb|Y10657.1|CLRCAGENE C.littorale rca gene
          Length = 2513

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 147/180 (81%)
 Strand = Plus / Minus

                                                                        
Query: 86   ctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaactt 145
            ||||||||| ||| ||||||| ||||| ||||| |||||||||||   ||||||| ||||
Sbjct: 1861 ctggaagattcccatgcagacgccgatgcggtcctcacgggtggggttccagtagtactt 1802

                                                                        
Query: 146  ctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgac 205
            |||||| || || |||||||| || || ||||| || || |||||||||||||| |||  
Sbjct: 1801 ctccatgcggccgtcacggatgaggggggcgtacagggtggagaaatcgttacccgtgca 1742

                                                                        
Query: 206  gacgatgggcacacgggggttctcctccttgttgtacatgccanggagctgcacgttggt 265
            ||| ||||| ||||||||  ||| | |||  ||||||| |||  | ||||||||||||||
Sbjct: 1741 gacaatgggaacacggggaatctgcacctccttgtacacgccgggcagctgcacgttggt 1682

---

>emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase
          Length = 1652

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 138/166 (83%), Gaps = 4/166 (2%)
 Strand = Plus / Minus

                                                                        
Query: 102  cagacaccgatacggtcgtcacgggtgggagcccagt--agaacttctccatacgaccat 159
            ||||||||||||||||| |||||||| ||   |||||  |||||||||||||||| ||||
Sbjct: 1016 cagacaccgatacggtcttcacgggtcggg--ccagtcaagaacttctccatacgtccat 959

                                                                        
Query: 160  cacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggcacac 219
            || |||| |||||| |||| |  || |||||||||||||| |||   | |||||| ||||
Sbjct: 958  caaggatgagaggaccgtataaggtggagaaatcgttaccagtgcaaatgatggggacac 899

                                                          
Query: 220  gggggttctcctccttgttgtacatgccanggagctgcacgttggt 265
            | | |||||| |||||||||||||| ||  ||||||| ||||||||
Sbjct: 898  gtgcgttctcttccttgttgtacattcctgggagctggacgttggt 853

---

>emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphosphate carboxylase activase
            (pJQ4)
          Length = 1655

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 205/258 (79%)
 Strand = Plus / Minus

                                                                        
Query: 5    cagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacgacaga 64
            ||||||||| || |||||||| |||||||| |||||||| ||||| ||||| |  || | 
Sbjct: 1079 cagagcaccaaagaagtcaatagattgtccagggaaggtatcgacaatctttataacggc 1020

                                                                        
Query: 65   ctcgtcactgacattgtcggtctggaagatacccttgcagacaccgatacggtcgtcacg 124
             || |||   || |||||||||  ||| ||||||||||| ||||| || |  || || | 
Sbjct: 1019 ttcctcaggcacgttgtcggtcctgaaaatacccttgcaaacaccaattctatcttccct 960

                                                                        
Query: 125  ggtgggagcccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgt 184
             || || ||||| ||||||||||||||||||||||||||||| |||||||| || |  ||
Sbjct: 959  agttggtgcccaatagaacttctccatacgaccatcacggataagaggagcatacaatgt 900

                                                                        
Query: 185  cgagaaatcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgtacat 244
             ||||| |||||||| ||||| |  ||||| || | || |||||| | ||||||||||||
Sbjct: 899  ggagaagtcgttaccagtgacaataatggggactctggcgttctcttgcttgttgtacat 840

                              
Query: 245  gccanggagctgcacgtt 262
             ||  ||||||| |||||
Sbjct: 839  accggggagctggacgtt 822

---

>gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase mRNA, complete cds
          Length = 1656

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 105/125 (84%)
 Strand = Plus / Minus

                                                                       
Query: 132 gcccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaa 191
           ||||||||||||||||||||||||||||||||||| |||||||| || |  || ||||| 
Sbjct: 963 gcccagtagaacttctccatacgaccatcacggataagaggagcatacaatgtggagaag 904

                                                                       
Query: 192 tcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgtacatgccangg 251
           |||||||| ||||| |  ||||| || | || |||||| | |||||||||||| ||  ||
Sbjct: 903 tcgttaccagtgacaataatgggtaccctggcgttctcttgcttgttgtacataccgggg 844

                
Query: 252 agctg 256
           |||||
Sbjct: 843 agctg 839

---

>emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosphate carboxyase activase
           (pJQ11)
          Length = 883

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 68/76 (89%)
 Strand = Plus / Minus

                                                                       
Query: 132 gcccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaa 191
           ||||||||||||||||||||||||||||||||||| || ||||| || |  || ||||||
Sbjct: 222 gcccagtagaacttctccatacgaccatcacggataagtggagcatacaatgtggagaaa 163

                           
Query: 192 tcgttaccggtgacga 207
           |||||||| |||||||
Sbjct: 162 tcgttaccagtgacga 147



 Score = 44.1 bits (22), Expect = 0.23
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 9   gcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgac 58
           |||||||||||||| || |||||||| |||||| | || || ||||||||
Sbjct: 345 gcaccgaaaaagtcgatagattgtccagggaagttatcaacaatcttgac 296

---

>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete
           cds
          Length = 1674

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 68/76 (89%)
 Strand = Plus / Minus

                                                                       
Query: 132 gcccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaa 191
           ||||||||||||||||||||||||||||||||||| || ||||| || |  || ||||||
Sbjct: 982 gcccagtagaacttctccatacgaccatcacggataagtggagcatacaatgtggagaaa 923

                           
Query: 192 tcgttaccggtgacga 207
           |||||||| |||||||
Sbjct: 922 tcgttaccagtgacga 907

---

>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence
          Length = 1519

 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 65/74 (87%)
 Strand = Plus / Minus

                                                                       
Query: 132 gcccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaa 191
           ||||||||||| ||||||||||||||||||||||| ||||| || || |  || ||||||
Sbjct: 999 gcccagtagaatttctccatacgaccatcacggataagaggtgcatacaatgtggagaaa 940

                         
Query: 192 tcgttaccggtgac 205
           |||||||| |||||
Sbjct: 939 tcgttaccagtgac 926



 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                  
Query: 5    cagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgac 58
            |||||||||||| || ||||| |||||||| |||||| | ||||||||||||||
Sbjct: 1126 cagagcaccgaagaaatcaatagattgtccagggaagctatcgacgatcttgac 1073

---

>emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase
          Length = 2031

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 125/155 (80%)
 Strand = Plus / Minus

                                                                        
Query: 111  atacggtcgtcacgggtgggagcccagtagaacttctccatacgaccatcacggatcaga 170
            ||||| || ||||| || |||||||||||||| || ||||| ||||||||||| || |||
Sbjct: 1018 atacgatcttcacgagttggagcccagtagaatttatccatccgaccatcacgaatgaga 959

                                                                        
Query: 171  ggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggcacacgggggttctcc 230
            || || || | ||| ||||| |||||||| || || | |||||| || | ||| || || 
Sbjct: 958  ggtgcatataacgttgagaagtcgttaccagttactatgatgggaactctgggattttct 899

                                               
Query: 231  tccttgttgtacatgccanggagctgcacgttggt 265
            |||||||| ||||||||  | |||||||| |||||
Sbjct: 898  tccttgttatacatgcctggtagctgcacattggt 864



 Score = 44.1 bits (22), Expect = 0.23
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 8    agcaccgaaaaagtcaatggattgtcctgggaaggtgtcgac 49
            |||||| || ||||| || || ||||||||||||||||||||
Sbjct: 1121 agcaccaaagaagtctattgactgtcctgggaaggtgtcgac 1080

---

>ref|NM_105969.1| Arabidopsis thaliana ATP binding / ATPase AT1G73110 mRNA, complete
           cds
          Length = 1437

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                       
Query: 134 ccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatc 193
           |||||||||||||||||| |  || ||||||||||| ||||| || || || ||||||||
Sbjct: 970 ccagtagaacttctccattcttccttcacggatcagtggagcatacagtgtagagaaatc 911

                       
Query: 194 gttaccggtgac 205
           ||| || |||||
Sbjct: 910 gttccctgtgac 899

---

>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence
          Length = 108028

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 103/128 (80%)
 Strand = Plus / Plus

                                                                        
Query: 117  tcgtcacgggtgggagcccagtagaacttctccatacgaccatcacggatcagaggagcg 176
            |||||||| || || ||||||||||| || |||||||| |||||||| || | |||||| 
Sbjct: 6892 tcgtcacgagtaggtgcccagtagaatttttccatacgtccatcacgaattaaaggagca 6951

                                                                        
Query: 177  tagagcgtcgagaaatcgttaccggtgacgacgatgggcacacgggggttctcctccttg 236
            || | ||| ||||| || || || ||||||| ||| || || ||||  ||||| || |||
Sbjct: 6952 tacaacgtagagaagtcattgccagtgacgatgatagggacgcgggcattctcttctttg 7011

                    
Query: 237  ttgtacat 244
            ||||||||
Sbjct: 7012 ttgtacat 7019

---

>gb|AY078044.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds
          Length = 1299

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                       
Query: 134 ccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatc 193
           |||||||||||||||||| |  || ||||||||||| ||||| || || || ||||||||
Sbjct: 936 ccagtagaacttctccattcttccttcacggatcagtggagcatacagtgtagagaaatc 877

                       
Query: 194 gttaccggtgac 205
           ||| || |||||
Sbjct: 876 gttccctgtgac 865

---

>gb|AF361834.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds
          Length = 1437

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                       
Query: 134 ccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatc 193
           |||||||||||||||||| |  || ||||||||||| ||||| || || || ||||||||
Sbjct: 970 ccagtagaacttctccattcttccttcacggatcagtggagcatacagtgtagagaaatc 911

                       
Query: 194 gttaccggtgac 205
           ||| || |||||
Sbjct: 910 gttccctgtgac 899

---

>emb|BX815704.1|CNS0AARM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS85ZG11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1496

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                       
Query: 134 ccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatc 193
           |||||||||||||||||| |  || ||||||||||| ||||| || || || ||||||||
Sbjct: 944 ccagtagaacttctccattcttccttcacggatcagtggagcatacagtgtagagaaatc 885

                       
Query: 194 gttaccggtgac 205
           ||| || |||||
Sbjct: 884 gttccctgtgac 873

---

>dbj|AK118942.1| Arabidopsis thaliana At1g73110 mRNA for unknown protein, complete
           cds, clone: RAFL21-28-D21
          Length = 1447

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                       
Query: 134 ccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatc 193
           |||||||||||||||||| |  || ||||||||||| ||||| || || || ||||||||
Sbjct: 957 ccagtagaacttctccattcttccttcacggatcagtggagcatacagtgtagagaaatc 898

                       
Query: 194 gttaccggtgac 205
           ||| || |||||
Sbjct: 897 gttccctgtgac 886

---

>gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N23 genomic sequence, complete
             sequence
          Length = 116944

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                         
Query: 134   ccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatc 193
             |||||||||||||||||| |  || ||||||||||| ||||| || || || ||||||||
Sbjct: 97615 ccagtagaacttctccattcttccttcacggatcagtggagcatacagtgtagagaaatc 97674

                         
Query: 194   gttaccggtgac 205
             ||| || |||||
Sbjct: 97675 gttccctgtgac 97686

---

>emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubisco activase (rca gene)
          Length = 678

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 90/111 (81%)
 Strand = Plus / Minus

                                                                       
Query: 134 ccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatc 193
           ||||||||||||||||||||| |||||||| ||||  ||||| || |  || ||||||||
Sbjct: 678 ccagtagaacttctccatacgcccatcacgaatcaatggagcatacaaagttgagaaatc 619

                                                              
Query: 194 gttaccggtgacgacgatgggcacacgggggttctcctccttgttgtacat 244
            || || || || || || || ||||| || || || ||||||||||||||
Sbjct: 618 atttcctgtcacaacaattggaacacgaggattttcttccttgttgtacat 568

---

>emb|BX813694.1|CNS0ADV2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB33ZF10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1426

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                       
Query: 134 ccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatc 193
           |||||||||||||||||| |  || ||||||||||| ||||| || || || ||||||||
Sbjct: 998 ccagtagaacttctccattcttccttcacggatcagtggagcatacagtgtagagaaatc 939

              
Query: 194 gtt 196
           |||
Sbjct: 938 gtt 936

---

>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence
          Length = 105218

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                          
Query: 132    gcccagtagaacttctccatacgaccatcacggatcagaggagc 175
              ||||| ||||| |||||||||||||| ||||| || ||||||||
Sbjct: 103825 gcccaatagaatttctccatacgaccgtcacgaataagaggagc 103868

---

>gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete sequence
          Length = 163160

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 132   gcccagtagaacttctccatacgaccatcacggatcagaggagc 175
             ||||| ||||| |||||||||||||| ||||| || ||||||||
Sbjct: 82850 gcccaatagaatttctccatacgaccgtcacgaataagaggagc 82893

---

>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds
          Length = 4500

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                          
Query: 1    cacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtc 46
            ||||||| || ||||| ||||||||||| || || |||||||||||
Sbjct: 2707 cacgcagggcgccgaagaagtcaatggactggccggggaaggtgtc 2662

---

>emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putative rubisco
          activase (rba1 gene)
          Length = 321

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 1  cacgcagagcaccgaaaaagtc 22
          ||||||||||||||||||||||
Sbjct: 23 cacgcagagcaccgaaaaagtc 2

---

>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase
            activase mRNA, complete cds
          Length = 1693

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                          
Query: 1    cacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtc 46
            ||||||| || ||||| ||||||||||| || || |||||||||||
Sbjct: 1017 cacgcagggcgccgaagaagtcaatggactggccggggaaggtgtc 972

---

>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16
          Length = 349142

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 36   gggaaggtgtcgacgatcttg 56
            |||||||||||||||||||||
Sbjct: 3653 gggaaggtgtcgacgatcttg 3673

---

>emb|BX818441.1|CNS0ACQX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL79ZC02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 593

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 61/73 (83%), Gaps = 1/73 (1%)
 Strand = Plus / Minus

                                                                       
Query: 134 ccagtagaacttctccatacgaccatcacggatcagag-gagcgtagagcgtcgagaaat 192
           |||||||||||||||||| |  || ||||||||||| | |||| || || || |||||||
Sbjct: 208 ccagtagaacttctccattcttccttcacggatcagtgagagcatacagtgtagagaaat 149

                        
Query: 193 cgttaccggtgac 205
           |||| || |||||
Sbjct: 148 cgttccctgtgac 136

---

>gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complete sequence
          Length = 98713

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 86    ctggaagatacccttgcagacacc 109
             ||||| ||||||||||||||||||
Sbjct: 67288 ctggatgatacccttgcagacacc 67265

---

>emb|Z73941.1|LJRAB7B L.japonicus mRNA for small GTP-binding protein, RAB7B
          Length = 1010

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 54  ttgacgacagactcgtcact 73
           ||||||||||||||||||||
Sbjct: 289 ttgacgacagactcgtcact 308

---

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 105     acaccgatacggtcgtcacg 124
               ||||||||||||||||||||
Sbjct: 3056308 acaccgatacggtcgtcacg 3056327


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,347,122
Number of Sequences: 3902068
Number of extensions: 1347122
Number of successful extensions: 21204
Number of sequences better than 10.0: 103
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 21001
Number of HSP's gapped (non-prelim): 187
length of query: 276
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 254
effective length of database: 17,147,199,772
effective search space: 4355388742088
effective search space used: 4355388742088
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---