ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd27h15 |
|---|---|
| Clone Library Name | barley_pub |
>RSSA_DAUCA (O80377) 40S ribosomal protein SA (p40)| Length = 297 Score = 123 bits (309), Expect = 6e-28 Identities = 55/61 (90%), Positives = 57/61 (93%) Frame = -1 Query: 776 FCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGHKWEIMVDLFFYRD 597 FCDTDSPMRYVDIGIPANNKGK SIGCLFWLLARMVLQMRG I GHKWE+MVDLFFYR+ Sbjct: 147 FCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGVISQGHKWEVMVDLFFYRE 206 Query: 596 P 594 P Sbjct: 207 P 207
>RSSA_SOYBN (O22518) 40S ribosomal protein SA (p40)| Length = 310 Score = 123 bits (308), Expect = 7e-28 Identities = 55/61 (90%), Positives = 58/61 (95%) Frame = -1 Query: 776 FCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGHKWEIMVDLFFYRD 597 FCDTDSPMRYVDIGIPANNKGK SIGCLFWLLARMVLQMRGTI PG KW++MVDLFFYR+ Sbjct: 154 FCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMVDLFFYRE 213 Query: 596 P 594 P Sbjct: 214 P 214
>RSSAA_ARATH (Q08682) 40S ribosomal protein SA-1 (p40) (Laminin receptor| homolog) Length = 298 Score = 122 bits (307), Expect = 1e-27 Identities = 60/92 (65%), Positives = 65/92 (70%), Gaps = 2/92 (2%) Frame = -1 Query: 776 FCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGHKWEIMVDLFFYRD 597 FCDTDSPMR+VDIGIPANNKGK SIGCLFWLLARMVLQMRGTI G KW++MVDLFFYR+ Sbjct: 151 FCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIAAGQKWDVMVDLFFYRE 210 Query: 596 PXXXXXXXXXXXLGAPEYAAV--AEYTAPAGD 507 P EY A+ EY GD Sbjct: 211 PEETKPEDEDEAGPQAEYGALPAPEYGMVGGD 242
>RSSA_CICAR (O65751) 40S ribosomal protein SA (p40)| Length = 300 Score = 122 bits (307), Expect = 1e-27 Identities = 60/88 (68%), Positives = 68/88 (77%) Frame = -1 Query: 776 FCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGHKWEIMVDLFFYRD 597 FCDTDSPM YVDIGIPANNKGK SIGCLFWLLARMVLQMRGTI PG KW++MVDLFFYR+ Sbjct: 150 FCDTDSPMNYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMVDLFFYRE 209 Query: 596 PXXXXXXXXXXXLGAPEYAAVAEYTAPA 513 P + AP+Y A+A++ A Sbjct: 210 P-EEAKQPEEDEVAAPDY-AIADFNVSA 235
>RSSA_BRANA (Q9ZSR8) 40S ribosomal protein SA (p40) (Laminin receptor-like| protein) Length = 292 Score = 120 bits (301), Expect = 5e-27 Identities = 53/61 (86%), Positives = 57/61 (93%) Frame = -1 Query: 776 FCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGHKWEIMVDLFFYRD 597 FCDTDSPMR+VDIGIPANNKGK SIGCLFWLLARMVLQMRGTI P KW++MVDLFFYR+ Sbjct: 148 FCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPAQKWDVMVDLFFYRE 207 Query: 596 P 594 P Sbjct: 208 P 208
>RSSAB_ARATH (Q8H173) 40S ribosomal protein SA-2 (p40 protein homolog)| Length = 280 Score = 117 bits (293), Expect = 4e-26 Identities = 58/90 (64%), Positives = 63/90 (70%) Frame = -1 Query: 776 FCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGHKWEIMVDLFFYRD 597 FCDTDSPM +VDIGIPANNKGK SIGCLFWLLARMVLQMRGTIL KW++MVDLFFYR+ Sbjct: 152 FCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTILAAQKWDVMVDLFFYRE 211 Query: 596 PXXXXXXXXXXXLGAPEYAAVAEYTAPAGD 507 P G E A+Y GD Sbjct: 212 P------EEAKQEGDEEAEVQADYGMVGGD 235
>RSSA_CHICK (P50890) 40S ribosomal protein SA (p40) (34/67 kDa laminin| receptor) (37LRP) Length = 296 Score = 94.7 bits (234), Expect = 3e-19 Identities = 46/88 (52%), Positives = 57/88 (64%), Gaps = 1/88 (1%) Frame = -1 Query: 773 CDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGHKWEIMVDLFFYRDP 594 C+TDSP+RYVDI IP NNKG S+G ++W+LAR VL+MRGTI H WE+M DL+FYRDP Sbjct: 148 CNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDP 207 Query: 593 XXXXXXXXXXXLGA-PEYAAVAEYTAPA 513 A + E+TAPA Sbjct: 208 EEIEKEEQAAAEKAVTKEEFQTEWTAPA 235
>RSSA_RAT (P38983) 40S ribosomal protein SA (p40) (34/67 kDa laminin| receptor) Length = 294 Score = 94.7 bits (234), Expect = 3e-19 Identities = 46/88 (52%), Positives = 57/88 (64%), Gaps = 1/88 (1%) Frame = -1 Query: 773 CDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGHKWEIMVDLFFYRDP 594 C+TDSP+RYVDI IP NNKG S+G ++W+LAR VL+MRGTI H WE+M DL+FYRDP Sbjct: 147 CNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDP 206 Query: 593 XXXXXXXXXXXLGA-PEYAAVAEYTAPA 513 A + E+TAPA Sbjct: 207 EEIEKEEQAAAEKAVTKEEFQGEWTAPA 234
>RSSA_HUMAN (P08865) 40S ribosomal protein SA (p40) (34/67 kDa laminin| receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) Length = 294 Score = 94.7 bits (234), Expect = 3e-19 Identities = 46/88 (52%), Positives = 57/88 (64%), Gaps = 1/88 (1%) Frame = -1 Query: 773 CDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGHKWEIMVDLFFYRDP 594 C+TDSP+RYVDI IP NNKG S+G ++W+LAR VL+MRGTI H WE+M DL+FYRDP Sbjct: 147 CNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDP 206 Query: 593 XXXXXXXXXXXLGA-PEYAAVAEYTAPA 513 A + E+TAPA Sbjct: 207 EEIEKEEQAAAEKAVTKEEFQGEWTAPA 234
>RSSA_BOVIN (P26452) 40S ribosomal protein SA (p40) (C10 protein)| Length = 294 Score = 94.7 bits (234), Expect = 3e-19 Identities = 46/88 (52%), Positives = 57/88 (64%), Gaps = 1/88 (1%) Frame = -1 Query: 773 CDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGHKWEIMVDLFFYRDP 594 C+TDSP+RYVDI IP NNKG S+G ++W+LAR VL+MRGTI H WE+M DL+FYRDP Sbjct: 147 CNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDP 206 Query: 593 XXXXXXXXXXXLGA-PEYAAVAEYTAPA 513 A + E+TAPA Sbjct: 207 EEIEKEEQAAAEKAVTKEEFQGEWTAPA 234
>RSSA_MOUSE (P14206) 40S ribosomal protein SA (p40) (34/67 kDa laminin| receptor) Length = 294 Score = 92.4 bits (228), Expect = 1e-18 Identities = 45/88 (51%), Positives = 56/88 (63%), Gaps = 1/88 (1%) Frame = -1 Query: 773 CDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGHKWEIMVDLFFYRDP 594 C+TDSP+ YVDI IP NNKG S+G ++W+LAR VL+MRGTI H WE+M DL+FYRDP Sbjct: 147 CNTDSPLAYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDP 206 Query: 593 XXXXXXXXXXXLGA-PEYAAVAEYTAPA 513 A + E+TAPA Sbjct: 207 EEIEKEEQAAAEKAVTKEEFQGEWTAPA 234
>RSSA_CRIGR (P38982) 40S ribosomal protein SA (p40) (34/67 kDa laminin| receptor) Length = 294 Score = 92.4 bits (228), Expect = 1e-18 Identities = 45/88 (51%), Positives = 56/88 (63%), Gaps = 1/88 (1%) Frame = -1 Query: 773 CDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGHKWEIMVDLFFYRDP 594 C+TDSP+RYVDI IP NNKG S+G ++W+LAR V +MRGTI H WE+M DL+FYRDP Sbjct: 147 CNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVRRMRGTISREHPWEVMPDLYFYRDP 206 Query: 593 XXXXXXXXXXXLGA-PEYAAVAEYTAPA 513 A + E+TAPA Sbjct: 207 EEIEKEEQAAAEKAVTKEEFQGEWTAPA 234
>RS0_NEUCR (Q01291) 40S ribosomal protein S0 (Ribosome-associated protein 1)| Length = 290 Score = 87.4 bits (215), Expect = 4e-17 Identities = 37/61 (60%), Positives = 48/61 (78%), Gaps = 1/61 (1%) Frame = -1 Query: 773 CDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGH-KWEIMVDLFFYRD 597 CD DSP YVD+ IP NNKG+ +IGC++W+LAR VL++RGTI W++MVDL+FYRD Sbjct: 150 CDADSPTEYVDVAIPTNNKGRHAIGCVWWMLAREVLRLRGTIYNRETPWDVMVDLYFYRD 209 Query: 596 P 594 P Sbjct: 210 P 210
>RS0_PNECA (Q01661) 40S ribosomal protein S0 (Extracellular matrix receptor| protein) Length = 295 Score = 87.0 bits (214), Expect = 6e-17 Identities = 38/61 (62%), Positives = 50/61 (81%), Gaps = 1/61 (1%) Frame = -1 Query: 773 CDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGH-KWEIMVDLFFYRD 597 CDTDSP++YVD+ IP NNKG+ SIG ++W+LAR VL++RGT+ +W IMVDL+FYRD Sbjct: 146 CDTDSPLQYVDVAIPTNNKGRHSIGLIWWMLAREVLRLRGTLANRDVEWGIMVDLYFYRD 205 Query: 596 P 594 P Sbjct: 206 P 206
>RSSA_DROME (P38979) 40S ribosomal protein SA (p40) (Stubarista protein)| (Laminin receptor homolog) (K14) Length = 270 Score = 87.0 bits (214), Expect = 6e-17 Identities = 38/61 (62%), Positives = 48/61 (78%) Frame = -1 Query: 776 FCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGHKWEIMVDLFFYRD 597 F +TDSP+RY+DI IP NNK SIG ++WLLAR VL++RGTI +W ++VDLFFYRD Sbjct: 147 FTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVVVDLFFYRD 206 Query: 596 P 594 P Sbjct: 207 P 207
>RSSA_URECA (P38981) 40S ribosomal protein SA (p40) (34/67 kDa laminin-binding| protein) Length = 317 Score = 85.9 bits (211), Expect = 1e-16 Identities = 43/92 (46%), Positives = 55/92 (59%), Gaps = 7/92 (7%) Frame = -1 Query: 770 DTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGHKWEIMVDLFFYRDPX 591 +TDSP++YVDI IP NNK S+G ++W+LAR VL++RGTI WE+MVDLFFYRDP Sbjct: 149 NTDSPLKYVDIAIPCNNKSIHSVGLMWWMLAREVLRLRGTISREVPWEVMVDLFFYRDPE 208 Query: 590 XXXXXXXXXXLGA-------PEYAAVAEYTAP 516 A E+ A +TAP Sbjct: 209 EAEKEAQAEQAAAEKDKAPKEEFTADQAFTAP 240
>RSSA_TRIGR (P38980) 40S ribosomal protein SA (p40) (34/67 kDa laminin-binding| protein) Length = 316 Score = 82.8 bits (203), Expect = 1e-15 Identities = 36/60 (60%), Positives = 46/60 (76%) Frame = -1 Query: 773 CDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGHKWEIMVDLFFYRDP 594 C+TDSP+RYVDI IP NNK SIG ++W+L+R VL++RG I WEIM DL+F+RDP Sbjct: 148 CNTDSPLRYVDIAIPCNNKSIHSIGLMWWMLSREVLRLRGAISRDVTWEIMCDLYFFRDP 207
>RSSA_CHLVR (P38984) 40S ribosomal protein SA (p40) (33 kDa laminin-binding| protein) Length = 293 Score = 82.8 bits (203), Expect = 1e-15 Identities = 36/60 (60%), Positives = 45/60 (75%) Frame = -1 Query: 773 CDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGHKWEIMVDLFFYRDP 594 C+TDSP+R+VD IP NN+G QSIG ++W+LAR VL +RG I W +M DLFFYRDP Sbjct: 148 CNTDSPLRFVDCAIPCNNRGIQSIGTMWWILAREVLHLRGIISRKTPWNVMPDLFFYRDP 207
>RS0A_SCHPO (Q9Y7L8) 40S ribosomal protein S0-A| Length = 292 Score = 81.6 bits (200), Expect = 2e-15 Identities = 42/89 (47%), Positives = 55/89 (61%), Gaps = 2/89 (2%) Frame = -1 Query: 773 CDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGHKWEIMVDLFFYRDP 594 CDTDS + +VDI IP NNKG++SIG +++LLAR VL++RGT+ W++M DL+FYRDP Sbjct: 150 CDTDSILNHVDIAIPTNNKGRKSIGLIWYLLAREVLRVRGTLSRSAPWDVMPDLYFYRDP 209 Query: 593 --XXXXXXXXXXXLGAPEYAAVAEYTAPA 513 A E A V E A A Sbjct: 210 EEVEREEEAKKAAAAAAEEAQVEEAVAAA 238
>RSSA_STRPU (P46771) 40S ribosomal protein SA (p40) (34/67 kDa laminin-binding| protein) (Fragment) Length = 264 Score = 81.3 bits (199), Expect = 3e-15 Identities = 35/60 (58%), Positives = 47/60 (78%) Frame = -1 Query: 773 CDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGHKWEIMVDLFFYRDP 594 C++DSP+R+VDI IP NNK SIG ++W+L+R VL++RG I WEIMVDL+F+RDP Sbjct: 71 CNSDSPLRHVDIAIPCNNKSIHSIGLMWWMLSREVLRLRGAISRDVTWEIMVDLYFFRDP 130
>RS0B_SCHPO (Q9P546) 40S ribosomal protein S0-B| Length = 287 Score = 78.6 bits (192), Expect = 2e-14 Identities = 42/90 (46%), Positives = 53/90 (58%), Gaps = 3/90 (3%) Frame = -1 Query: 773 CDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGHKWEIMVDLFFYRDP 594 CDTDS + +VD+ IP NNKG +SIG ++LLAR VL++RG I WE+M DL+FYRDP Sbjct: 151 CDTDSILNHVDVAIPINNKGYKSIGLAWYLLAREVLRLRGNISRTTAWEVMPDLYFYRDP 210 Query: 593 ---XXXXXXXXXXXLGAPEYAAVAEYTAPA 513 A E A +A TA A Sbjct: 211 EEIEREEEQKAAAAAAAEEEAQLAAQTAAA 240
>RS0_CANAL (O42817) 40S ribosomal protein S0| Length = 253 Score = 76.3 bits (186), Expect = 1e-13 Identities = 42/95 (44%), Positives = 52/95 (54%), Gaps = 7/95 (7%) Frame = -1 Query: 770 DTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGH--KWEIMVDLFFYRD 597 D SP YVD+ IP NNKGK IG ++WLLAR VL++RG I+P +W +M DL+FYRD Sbjct: 148 DMQSPSEYVDVAIPCNNKGKHCIGLIWWLLAREVLRLRG-IIPDRTTEWSVMPDLYFYRD 206 Query: 596 P-----XXXXXXXXXXXLGAPEYAAVAEYTAPAGD 507 P GAP A E+T D Sbjct: 207 PEEIEQNAVEEAKTEGVEGAPVAEAETEWTGETED 241
>RS0A_YEAST (P32905) 40S ribosomal protein S0-A (Nucleic acid-binding protein| NAB1A) Length = 251 Score = 72.8 bits (177), Expect = 1e-12 Identities = 33/60 (55%), Positives = 44/60 (73%), Gaps = 1/60 (1%) Frame = -1 Query: 770 DTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILP-GHKWEIMVDLFFYRDP 594 D DSP +VD+ IP NN+GK SIG +++LLAR VL++RG ++ W IM DL+FYRDP Sbjct: 147 DLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSIMPDLYFYRDP 206
>RSSA_CAEEL (P46769) Probable 40S ribosomal protein SA (p40)| Length = 275 Score = 71.6 bits (174), Expect = 3e-12 Identities = 35/68 (51%), Positives = 49/68 (72%), Gaps = 7/68 (10%) Frame = -1 Query: 776 FCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTI-------LPGHKWEIMV 618 F +T+SP++ +DIG+P NNKG++SIG ++W+LAR +L +RG I L G EIM Sbjct: 146 FVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREILILRGKISRQTGFVLEGK--EIMP 203 Query: 617 DLFFYRDP 594 DL+FYRDP Sbjct: 204 DLYFYRDP 211
>RS0B_YEAST (P46654) 40S ribosomal protein S0-B (Nucleic acid-binding protein| NAB1B) Length = 251 Score = 70.9 bits (172), Expect = 4e-12 Identities = 32/60 (53%), Positives = 44/60 (73%), Gaps = 1/60 (1%) Frame = -1 Query: 770 DTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILP-GHKWEIMVDLFFYRDP 594 D DSP +VD+ IP NN+GK SIG +++LLAR VL++RG ++ W IM DL+FYR+P Sbjct: 147 DLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSIMPDLYFYRNP 206
>RS2_PYRAE (Q8ZYE2) 30S ribosomal protein S2P| Length = 208 Score = 57.4 bits (137), Expect = 5e-08 Identities = 23/43 (53%), Positives = 33/43 (76%) Frame = -1 Query: 770 DTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILP 642 DTD+P +Y+D IP NNKG++S+ +FW+LAR VL+ RG + P Sbjct: 148 DTDTPHQYIDFMIPCNNKGRKSLALIFWILARQVLRERGELKP 190
>RS2_SULSO (P95993) 30S ribosomal protein S2P| Length = 231 Score = 55.1 bits (131), Expect = 2e-07 Identities = 26/59 (44%), Positives = 37/59 (62%) Frame = -1 Query: 776 FCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGHKWEIMVDLFFYR 600 F DTD+ + Y+D+ IPANNKG++S+ L+W LAR +L+ R I P + V F R Sbjct: 170 FADTDAKIDYIDLIIPANNKGRKSLALLYWALARQILRERRVIPPDGDLAVPVSEFEMR 228
>RS2_THEVO (Q97BQ4) 30S ribosomal protein S2P| Length = 199 Score = 54.7 bits (130), Expect = 3e-07 Identities = 23/55 (41%), Positives = 38/55 (69%) Frame = -1 Query: 773 CDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGHKWEIMVDLF 609 CD ++ +VD+ IP NNKG++S+ ++WLLAR +L+ RGTI +++ +D F Sbjct: 141 CDANNKTDFVDLVIPTNNKGRRSLAVIYWLLAREILKNRGTITSYDQFKYTIDDF 195
>RSSA_ECHGR (P46770) 40S ribosomal protein SA (p40) (Laminin-binding protein)| Length = 268 Score = 54.7 bits (130), Expect = 3e-07 Identities = 27/60 (45%), Positives = 39/60 (65%) Frame = -1 Query: 776 FCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGHKWEIMVDLFFYRD 597 FC+TDSP++ VDIGIP NN K SI + W+LAR V ++ G ++++DLF R+ Sbjct: 147 FCNTDSPLQCVDIGIPCNN-DKYSIALMLWMLAREVRRIWGLDPRSQPGDVIMDLFLMRE 205
>RS2_THEAC (P57712) 30S ribosomal protein S2P| Length = 199 Score = 54.3 bits (129), Expect = 4e-07 Identities = 23/55 (41%), Positives = 38/55 (69%) Frame = -1 Query: 773 CDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGHKWEIMVDLF 609 CD ++ +VD+ IP NNKG++S+ ++WLLAR +L+ RGTI +++ +D F Sbjct: 141 CDANNKTDFVDLIIPTNNKGRRSLAVIYWLLAREILKNRGTITSYDQFKYTIDDF 195
>RS2_PYRHO (O59295) 30S ribosomal protein S2P| Length = 202 Score = 53.1 bits (126), Expect = 9e-07 Identities = 22/54 (40%), Positives = 38/54 (70%) Frame = -1 Query: 770 DTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGHKWEIMVDLF 609 DT++ + YVD+ IP NNKG++++ ++W+LAR +L RG I +++I V+ F Sbjct: 142 DTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREEFKIPVEEF 195
>RS2_PYRAB (Q9V191) 30S ribosomal protein S2P| Length = 202 Score = 53.1 bits (126), Expect = 9e-07 Identities = 22/54 (40%), Positives = 38/54 (70%) Frame = -1 Query: 770 DTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGHKWEIMVDLF 609 DT++ + YVD+ IP NNKG++++ ++W+LAR +L RG I +++I V+ F Sbjct: 142 DTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEISSREEFKIPVEEF 195
>RS2_SULTO (Q96YW5) 30S ribosomal protein S2P| Length = 225 Score = 52.8 bits (125), Expect = 1e-06 Identities = 23/45 (51%), Positives = 33/45 (73%) Frame = -1 Query: 776 FCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILP 642 F DTD+ + +VD IPANNKG++S+ L+W+LAR +L+ R I P Sbjct: 164 FADTDAKVDFVDFIIPANNKGRKSLALLYWVLARQILRERREIPP 208
>RS2_PYRFU (Q8U0F0) 30S ribosomal protein S2P| Length = 202 Score = 52.4 bits (124), Expect = 2e-06 Identities = 22/54 (40%), Positives = 37/54 (68%) Frame = -1 Query: 770 DTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGHKWEIMVDLF 609 DT++ + YVD+ IP NNKG++++ ++W+LAR +L RG I ++I V+ F Sbjct: 142 DTENLLSYVDLAIPTNNKGRKALALIYWILAREILYNRGEIQSREDFKIPVEEF 195
>RS2_AERPE (Q9YB45) 30S ribosomal protein S2P| Length = 205 Score = 52.4 bits (124), Expect = 2e-06 Identities = 20/57 (35%), Positives = 37/57 (64%) Frame = -1 Query: 770 DTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGHKWEIMVDLFFYR 600 DTD+ + +D+ IPANN+G++S+ ++W+L R +L+ RG + P ++ + F R Sbjct: 145 DTDNSIENIDLVIPANNRGRRSLALIYWILTREILRRRGVLKPDEDLDVSYEEFMAR 201
>RS2_SULAC (P39478) 30S ribosomal protein S2P| Length = 225 Score = 51.2 bits (121), Expect = 4e-06 Identities = 21/43 (48%), Positives = 33/43 (76%) Frame = -1 Query: 776 FCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTI 648 F DTD+ + ++D+ IPANNKG++S+ L+W+LAR +L+ R I Sbjct: 164 FTDTDARVDFIDVIIPANNKGRKSLALLYWVLARQILRERKEI 206
>RS2_PICTO (Q6L1Q0) 30S ribosomal protein S2P| Length = 200 Score = 50.8 bits (120), Expect = 5e-06 Identities = 22/55 (40%), Positives = 37/55 (67%) Frame = -1 Query: 773 CDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGHKWEIMVDLF 609 CD ++ +VD+ IP NNKG++S+ ++WLLAR +L+ RG I +++ +D F Sbjct: 142 CDANNKTDFVDLIIPTNNKGRRSLAVIYWLLAREILKNRGDIKSYDEFKQTIDDF 196
>RS2_PYRKO (Q5JJD2) 30S ribosomal protein S2P| Length = 201 Score = 49.7 bits (117), Expect = 1e-05 Identities = 24/57 (42%), Positives = 37/57 (64%) Frame = -1 Query: 770 DTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGHKWEIMVDLFFYR 600 DT++ + YVDI IP NNKG++++ ++W+LAR VL R I ++I V+ F R Sbjct: 141 DTENFLSYVDIAIPTNNKGRKALALIYWILAREVLYNRKEIESREDFKIPVEDFEMR 197
>RS2_METTH (O26150) 30S ribosomal protein S2P| Length = 198 Score = 49.3 bits (116), Expect = 1e-05 Identities = 20/42 (47%), Positives = 31/42 (73%) Frame = -1 Query: 773 CDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTI 648 CDT++ + VDI IP NNKG+++I ++WLLAR L+ +G + Sbjct: 140 CDTENLLGNVDIAIPVNNKGRKAIALVYWLLARQFLREKGIL 181
>RS2_METKA (Q8TV23) 30S ribosomal protein S2P| Length = 203 Score = 47.4 bits (111), Expect = 5e-05 Identities = 20/49 (40%), Positives = 33/49 (67%) Frame = -1 Query: 773 CDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGHKWE 627 CDTD+ VD+ IP NNKG++++ ++WLLAR +L+ G + ++E Sbjct: 143 CDTDNFTGNVDLAIPTNNKGRKALALVYWLLARELLKKLGRLEEDEEFE 191
>RS2_ARCFU (O29132) 30S ribosomal protein S2P| Length = 197 Score = 45.1 bits (105), Expect = 3e-04 Identities = 17/40 (42%), Positives = 30/40 (75%) Frame = -1 Query: 773 CDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRG 654 CD+++ VD+ IP NNKG++++ ++WLLAR + ++RG Sbjct: 144 CDSNNSSADVDLVIPTNNKGRRALAIVYWLLAREIAKIRG 183
>RS2_METJA (P54109) 30S ribosomal protein S2P| Length = 222 Score = 45.1 bits (105), Expect = 3e-04 Identities = 18/42 (42%), Positives = 29/42 (69%) Frame = -1 Query: 773 CDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTI 648 CDT+ ++D+ IP NNKGK+++ +++LL R L+ RG I Sbjct: 142 CDTEHLTSFIDLVIPTNNKGKKAVALIYYLLTREYLKNRGVI 183
>RS2_METMA (Q8PW41) 30S ribosomal protein S2P| Length = 224 Score = 44.3 bits (103), Expect = 4e-04 Identities = 18/41 (43%), Positives = 29/41 (70%) Frame = -1 Query: 773 CDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGT 651 CDT++ VD+ IP NNKG++++ ++WLLAR V ++ T Sbjct: 171 CDTNNLTSNVDLVIPTNNKGRKALSLVYWLLAREVSRLNNT 211
>RS2_METAC (Q8TT39) 30S ribosomal protein S2P| Length = 225 Score = 43.9 bits (102), Expect = 6e-04 Identities = 18/41 (43%), Positives = 29/41 (70%) Frame = -1 Query: 773 CDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGT 651 CDT++ VD+ IP NNKG++++ ++WLLAR V ++ T Sbjct: 172 CDTNNLTSNVDLVIPTNNKGRKALSLVYWLLAREVSRLNDT 212
>RS2_HALMA (P29202) 30S ribosomal protein S2P (HS2) (ORFMSG)| Length = 267 Score = 42.7 bits (99), Expect = 0.001 Identities = 16/40 (40%), Positives = 27/40 (67%) Frame = -1 Query: 773 CDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRG 654 CD+++ VD+ +P NNKG++++ ++WLLA L RG Sbjct: 214 CDSNNTTSNVDLVVPTNNKGRKALSVVYWLLANETLDRRG 253
>RS2_HALSA (P57713) 30S ribosomal protein S2P| Length = 249 Score = 42.4 bits (98), Expect = 0.002 Identities = 16/40 (40%), Positives = 27/40 (67%) Frame = -1 Query: 773 CDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRG 654 CD+++ VD+ +P NNKG++++ ++WLLA L RG Sbjct: 196 CDSNNQTGNVDLVVPTNNKGRRALSVVYWLLANETLDRRG 235
>RS2_MYCPU (Q98Q36) 30S ribosomal protein S2| Length = 330 Score = 33.5 bits (75), Expect = 0.77 Identities = 19/58 (32%), Positives = 31/58 (53%) Frame = -1 Query: 770 DTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGHKWEIMVDLFFYRD 597 D+D+ +VD+GIPAN+ +SI + +LA ++ +G DLF Y+D Sbjct: 207 DSDANPDFVDLGIPANDDSIKSISLILTVLADAIVNAKGG----------KDLFAYQD 254
>VG24_BPT4 (P19896) Head vertex protein Gp24| Length = 427 Score = 33.1 bits (74), Expect = 1.00 Identities = 12/30 (40%), Positives = 21/30 (70%) Frame = -1 Query: 776 FCDTDSPMRYVDIGIPANNKGKQSIGCLFW 687 +CDT+SP+ YV +G+ N K+ +G +F+ Sbjct: 313 YCDTNSPLDYVIVGVVENIGEKEIVGSIFY 342 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 101,929,028 Number of Sequences: 219361 Number of extensions: 1982678 Number of successful extensions: 5854 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 5002 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5838 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 8353746928 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
