ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd27g19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
2dbj|AP003756.5| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
3dbj|AP003755.5| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
4emb|AL117325.3|HSDA79C13 Human DNA sequence from clone RP6-79C13... 44 0.55
5dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete ge... 44 0.55
6gb|AC160995.4| Mus musculus BAC clone RP23-96D5 from chromosome ... 42 2.2
7emb|Z81528.1|CEF35E2 Caenorhabditis elegans Cosmid F35E2, comple... 42 2.2
8emb|CR376731.13| Zebrafish DNA sequence from clone DKEY-117K10 i... 42 2.2
9emb|AL590784.9| Human DNA sequence from clone RP11-260I7 on chro... 42 2.2
10gb|AC139345.8| Papio anubis clone rp41-256p17, complete sequence 42 2.2
11gb|AC005341.13| Homo sapiens chromosome , clone RP11-146P2, comp... 42 2.2
12gb|AC011626.8| Homo sapiens chromosome 8, clone RP11-369K17, com... 42 2.2
13gb|AC073283.8| Homo sapiens BAC clone RP11-761B3 from 2, complet... 42 2.2
14gb|AC154482.2| Mus musculus BAC clone RP23-198P13 from chromosom... 42 2.2
15gb|AC096654.1| Homo sapiens BAC clone RP11-17I18 from 2, complet... 42 2.2
16gb|AC149584.4| Mus musculus BAC clone RP24-298L13 from 8, comple... 42 2.2
17gb|AC140929.4| Mus musculus BAC clone RP23-258I3 from 8, complet... 42 2.2
18emb|AL772171.7| Mouse DNA sequence from clone RP23-36B3 on chrom... 42 2.2
19gb|AY702706.1| Homo sapiens cytochrome P450, family 2, subfamily... 40 8.6
20gb|CP000114.1| Streptococcus agalactiae A909, complete genome 40 8.6
21emb|AL365192.22| Human DNA sequence from clone RP3-421H19 on chr... 40 8.6
22emb|AL359672.19| Human DNA sequence from clone RP11-208C17 on ch... 40 8.6
23emb|AL357520.12| Human DNA sequence from clone RP11-288D15 on ch... 40 8.6
24emb|AL162381.16| Human DNA sequence from clone RP11-174B19 on ch... 40 8.6
25emb|AL157906.8| Human DNA sequence from clone RP5-896C23 on chro... 40 8.6
26gb|AE014235.1| Streptococcus agalactiae 2603V/R section 45 of 10... 40 8.6
27emb|AL766848.1|SAG766848 Streptococcus agalactiae NEM316 complet... 40 8.6
28emb|CR559945.12| Zebrafish DNA sequence from clone CH211-195E19 ... 40 8.6
29emb|BX088573.4| Mouse DNA sequence from clone RP23-78N10 on chro... 40 8.6
30gb|AC110741.5| Homo sapiens chromosome 8, clone RP11-157E21, com... 40 8.6
31gb|AC007541.9| Homo sapiens 12q24.1 BAC RPCI11-412D9 (Roswell Pa... 40 8.6
32gb|AC123660.8| Mus musculus chromosome 3, clone RP23-196E24, com... 40 8.6
33dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
34gb|AC016770.10| Homo sapiens BAC clone RP11-564H1 from 2, comple... 40 8.6
35gb|AC154705.2| Mus musculus BAC clone RP23-131F11 from chromosom... 40 8.6
36gb|AC005034.2| Homo sapiens BAC clone RP11-342K6 from 2, complet... 40 8.6
37gb|AC112666.9| Mus musculus chromosome 3, clone RP24-119D5, comp... 40 8.6
38dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
39gb|AY303349.1| Enterobacteria phage RB69, complete genome 40 8.6
40dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
41emb|BX284670.11| Zebrafish DNA sequence from clone CH211-264D7 i... 40 8.6
42emb|AL590764.3|HS1091N2 Homo sapiens chromosome X from PAC 1091N... 40 8.6
43emb|AL929007.6| Zebrafish DNA sequence from clone CH211-235E9 in... 40 8.6
44emb|AL845290.7| Mouse DNA sequence from clone RP23-201A19 on chr... 40 8.6
45emb|AL929054.5| Mouse DNA sequence from clone RP23-454A14 on chr... 40 8.6
46dbj|AP005019.1| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 8.6
47emb|AL603867.7| Mouse DNA sequence from clone RP23-237G11 on chr... 40 8.6 
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 489     ttggtttccattagcatgctttt 511
               |||||||||||||||||||||||
Sbjct: 9063563 ttggtttccattagcatgctttt 9063541
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>dbj|AP003756.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1370_E02
          Length = 128326

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 489   ttggtttccattagcatgctttt 511
             |||||||||||||||||||||||
Sbjct: 53970 ttggtttccattagcatgctttt 53948
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>dbj|AP003755.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1354_H07
          Length = 157974

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 489    ttggtttccattagcatgctttt 511
              |||||||||||||||||||||||
Sbjct: 115006 ttggtttccattagcatgctttt 114984
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>emb|AL117325.3|HSDA79C13 Human DNA sequence from clone RP6-79C13 on chromosome Xq21.1-21.32
            Contains the 5' end of the gene for premature ovarian
            failure 1B (POF1B), complete sequence
          Length = 83673

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 192  ccagtttatggataaaggaaat 213
            ||||||||||||||||||||||
Sbjct: 3996 ccagtttatggataaaggaaat 3975
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>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome
          Length = 3031430

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 198     tatggataaaggaaataaaaat 219
               ||||||||||||||||||||||
Sbjct: 1361560 tatggataaaggaaataaaaat 1361539
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>gb|AC160995.4| Mus musculus BAC clone RP23-96D5 from chromosome 13, complete
            sequence
          Length = 235237

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 148  aattcagaagaaataactaca 168
            |||||||||||||||||||||
Sbjct: 2555 aattcagaagaaataactaca 2535
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>emb|Z81528.1|CEF35E2 Caenorhabditis elegans Cosmid F35E2, complete sequence
          Length = 37439

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 508   ttttattgtccataagaaaggctcatctg 536
             |||||||||||  ||||||||||||||||
Sbjct: 24727 ttttattgtcccaaagaaaggctcatctg 24755
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>emb|CR376731.13| Zebrafish DNA sequence from clone DKEY-117K10 in linkage group 8,
             complete sequence
          Length = 130762

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 140   tttatcaaaattcagaagaaa 160
             |||||||||||||||||||||
Sbjct: 42956 tttatcaaaattcagaagaaa 42936
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>emb|AL590784.9| Human DNA sequence from clone RP11-260I7 on chromosome 6, complete
             sequence
          Length = 159219

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 410   atgaaatagatcagaaagcaa 430
             |||||||||||||||||||||
Sbjct: 18577 atgaaatagatcagaaagcaa 18597
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>gb|AC139345.8| Papio anubis clone rp41-256p17, complete sequence
          Length = 179810

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 151    tcagaagaaataactacagag 171
              |||||||||||||||||||||
Sbjct: 124987 tcagaagaaataactacagag 124967
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>gb|AC005341.13| Homo sapiens chromosome , clone RP11-146P2, complete sequence
          Length = 161449

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 198   tatggataaaggaaataaaaa 218
             |||||||||||||||||||||
Sbjct: 98150 tatggataaaggaaataaaaa 98170
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>gb|AC011626.8| Homo sapiens chromosome 8, clone RP11-369K17, complete sequence
          Length = 184547

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 210    aaataaaaatgccaagcaaaa 230
              |||||||||||||||||||||
Sbjct: 106805 aaataaaaatgccaagcaaaa 106825
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>gb|AC073283.8| Homo sapiens BAC clone RP11-761B3 from 2, complete sequence
          Length = 181720

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 557    taactacctgagaggctgaga 577
              |||||||||||||||||||||
Sbjct: 151739 taactacctgagaggctgaga 151759
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>gb|AC154482.2| Mus musculus BAC clone RP23-198P13 from chromosome 13, complete
             sequence
          Length = 214193

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 148   aattcagaagaaataactaca 168
             |||||||||||||||||||||
Sbjct: 86116 aattcagaagaaataactaca 86136
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>gb|AC096654.1| Homo sapiens BAC clone RP11-17I18 from 2, complete sequence
          Length = 153396

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 146   aaaattcagaagaaataactacagagatg 174
             |||||||| |||||||||||| |||||||
Sbjct: 47991 aaaattcaaaagaaataactaaagagatg 47963
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>gb|AC149584.4| Mus musculus BAC clone RP24-298L13 from 8, complete sequence
          Length = 182904

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 402    tagaaaccatgaaatagatcagaaa 426
              |||||||||||||||| ||||||||
Sbjct: 119804 tagaaaccatgaaataaatcagaaa 119780
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>gb|AC140929.4| Mus musculus BAC clone RP23-258I3 from 8, complete sequence
          Length = 221905

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 402  tagaaaccatgaaatagatcagaaa 426
            |||||||||||||||| ||||||||
Sbjct: 7963 tagaaaccatgaaataaatcagaaa 7987
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>emb|AL772171.7| Mouse DNA sequence from clone RP23-36B3 on chromosome 4, complete
             sequence
          Length = 209864

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 520   taagaaaggctcatctgtgta 540
             |||||||||||||||||||||
Sbjct: 51469 taagaaaggctcatctgtgta 51489
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>gb|AY702706.1| Homo sapiens cytochrome P450, family 2, subfamily C, polypeptide 9
            (CYP2C9) gene, complete cds
          Length = 60723

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 193  cagtttatggataaaggaaataaa 216
            ||||||||||||||| ||||||||
Sbjct: 2303 cagtttatggataaatgaaataaa 2326
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>gb|CP000114.1| Streptococcus agalactiae A909, complete genome
          Length = 2127839

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 140     tttatcaaaattcagaagaa 159
               ||||||||||||||||||||
Sbjct: 1022541 tttatcaaaattcagaagaa 1022560
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>emb|AL365192.22| Human DNA sequence from clone RP3-421H19 on chromosome 6 Contains the
             5' part of a novel protein similar to ribosomal protein
             L14 (L14p/L23e), a novel gene, the CAPN11 gene for calpain
             11 and one CpG island, complete sequence
          Length = 89351

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 560   ctacctgagaggctgagaag 579
             ||||||||||||||||||||
Sbjct: 66343 ctacctgagaggctgagaag 66324
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>emb|AL359672.19| Human DNA sequence from clone RP11-208C17 on chromosome 10 Contains
            the CYP2C9 gene for cytochrome P450 family 2 subfamily C
            polypeptide 9, a mitochondrial NADH dehydrogenase 4
            (MTND4) pseudogene, a pseudogene similar to part of
            cytochrome P450 family 2 subfamily C, a novel pseudogene
            and the CYP2C8 gene for cytochrome P450 family 2
            subfamily C polypeptide 8, complete sequence
          Length = 143181

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 193  cagtttatggataaaggaaataaa 216
            ||||||||||||||| ||||||||
Sbjct: 2372 cagtttatggataaatgaaataaa 2395
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>emb|AL357520.12| Human DNA sequence from clone RP11-288D15 on chromosome 10 Contains a
             pseudogene similar to part of glycogen synthase kinase 3
             and a ubiquitin-conjugating enzyme pseudogene, complete
             sequence
          Length = 178942

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 142   tatcaaaattcagaagaaataact 165
             ||||||||| ||||||||||||||
Sbjct: 70188 tatcaaaatacagaagaaataact 70211
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>emb|AL162381.16| Human DNA sequence from clone RP11-174B19 on chromosome 6 Contains
            part of a gene for a novel protein (CGI-203), complete
            sequence
          Length = 19176

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 435  ttctctacccagaaaaccag 454
            ||||||||||||||||||||
Sbjct: 6806 ttctctacccagaaaaccag 6825
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>emb|AL157906.8| Human DNA sequence from clone RP5-896C23 on chromosome 1p22.3-31.2
             Contains GSSs and STSs, complete sequence
          Length = 115705

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 202   gataaaggaaataaaaatgc 221
             ||||||||||||||||||||
Sbjct: 91187 gataaaggaaataaaaatgc 91206
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>gb|AE014235.1| Streptococcus agalactiae 2603V/R section 45 of 100 of the complete
             genome
          Length = 20172

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   tttatcaaaattcagaagaa 159
             ||||||||||||||||||||
Sbjct: 14139 tttatcaaaattcagaagaa 14158
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>emb|AL766848.1|SAG766848 Streptococcus agalactiae NEM316 complete genome, segment 6
          Length = 233050

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   tttatcaaaattcagaagaa 159
             ||||||||||||||||||||
Sbjct: 35994 tttatcaaaattcagaagaa 36013
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>emb|CR559945.12| Zebrafish DNA sequence from clone CH211-195E19 in linkage group 13,
              complete sequence
          Length = 186151

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     agcaaaattgtccaaaaagc 64
              ||||||||||||||||||||
Sbjct: 144949 agcaaaattgtccaaaaagc 144930
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>emb|BX088573.4| Mouse DNA sequence from clone RP23-78N10 on chromosome 4 Contains the
             3' end of the Dbccr1 gene for deleted in bladder cancer
             chromosome region candidate 1 (human), complete sequence
          Length = 203865

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 272   tgacaaagcaaactgaaaca 291
             ||||||||||||||||||||
Sbjct: 26642 tgacaaagcaaactgaaaca 26623
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>gb|AC110741.5| Homo sapiens chromosome 8, clone RP11-157E21, complete sequence
          Length = 156262

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 194   agtttatggataaaggaaataaaa 217
             |||||||||||||| |||||||||
Sbjct: 44545 agtttatggataaatgaaataaaa 44522
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>gb|AC007541.9| Homo sapiens 12q24.1 BAC RPCI11-412D9 (Roswell Park Cancer Institute
             Human BAC Library) complete sequence
          Length = 143444

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 184   cagtgtgtccagtttatgga 203
             ||||||||||||||||||||
Sbjct: 79218 cagtgtgtccagtttatgga 79199
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>gb|AC123660.8| Mus musculus chromosome 3, clone RP23-196E24, complete sequence
          Length = 211632

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 201   ggataaaggaaataaaaatg 220
             ||||||||||||||||||||
Sbjct: 97787 ggataaaggaaataaaaatg 97806
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 492      gtttccattagcatgctttt 511
                ||||||||||||||||||||
Sbjct: 35267243 gtttccattagcatgctttt 35267262
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>gb|AC016770.10| Homo sapiens BAC clone RP11-564H1 from 2, complete sequence
          Length = 191919

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 194   agtttatggataaaggaaat 213
             ||||||||||||||||||||
Sbjct: 81162 agtttatggataaaggaaat 81181
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>gb|AC154705.2| Mus musculus BAC clone RP23-131F11 from chromosome 16, complete
             sequence
          Length = 177886

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 201   ggataaaggaaataaaaatg 220
             ||||||||||||||||||||
Sbjct: 86887 ggataaaggaaataaaaatg 86868
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>gb|AC005034.2| Homo sapiens BAC clone RP11-342K6 from 2, complete sequence
          Length = 198587

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 444    cagaaaaccagcatctcctc 463
              ||||||||||||||||||||
Sbjct: 176328 cagaaaaccagcatctcctc 176347
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>gb|AC112666.9| Mus musculus chromosome 3, clone RP24-119D5, complete sequence
          Length = 193302

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 201    ggataaaggaaataaaaatg 220
              ||||||||||||||||||||
Sbjct: 159915 ggataaaggaaataaaaatg 159934
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>dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1119_A01
          Length = 108727

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 492   gtttccattagcatgctttt 511
             ||||||||||||||||||||
Sbjct: 17577 gtttccattagcatgctttt 17596
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>gb|AY303349.1| Enterobacteria phage RB69, complete genome
          Length = 167560

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   aaaattcagaagaaataact 165
             ||||||||||||||||||||
Sbjct: 94911 aaaattcagaagaaataact 94930
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>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0474F11
          Length = 139544

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 492   gtttccattagcatgctttt 511
             ||||||||||||||||||||
Sbjct: 79293 gtttccattagcatgctttt 79312
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>emb|BX284670.11| Zebrafish DNA sequence from clone CH211-264D7 in linkage group 18,
             complete sequence
          Length = 159822

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    agcaaaattgtccaaaaagc 64
             ||||||||||||||||||||
Sbjct: 16846 agcaaaattgtccaaaaagc 16865
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>emb|AL590764.3|HS1091N2 Homo sapiens chromosome X from PAC 1091N2, region GJB1-DXS559 map
             Xq13.1, complete sequence
          Length = 201197

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 415   atagatcagaaagcaactaa 434
             ||||||||||||||||||||
Sbjct: 17880 atagatcagaaagcaactaa 17899
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>emb|AL929007.6| Zebrafish DNA sequence from clone CH211-235E9 in linkage group 1,
              complete sequence
          Length = 187464

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 144    tcaaaattcagaagaaataa 163
              ||||||||||||||||||||
Sbjct: 101320 tcaaaattcagaagaaataa 101301
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>emb|AL845290.7| Mouse DNA sequence from clone RP23-201A19 on chromosome 2, complete
             sequence
          Length = 146005

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    caaaattgtccaaaaagcaa 66
             ||||||||||||||||||||
Sbjct: 84421 caaaattgtccaaaaagcaa 84402
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>emb|AL929054.5| Mouse DNA sequence from clone RP23-454A14 on chromosome 2, complete
              sequence
          Length = 198497

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 253    ttcccaagctcctttgcaat 272
              ||||||||||||||||||||
Sbjct: 174363 ttcccaagctcctttgcaat 174344
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>dbj|AP005019.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-169D4, complete
             sequences
          Length = 98501

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 241   acctctctgatcttcccaag 260
             ||||||||||||||||||||
Sbjct: 84118 acctctctgatcttcccaag 84137
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>emb|AL603867.7| Mouse DNA sequence from clone RP23-237G11 on chromosome 15, complete
             sequence
          Length = 112729

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 439   ctacccagaaaaccagcatc 458
             ||||||||||||||||||||
Sbjct: 90021 ctacccagaaaaccagcatc 90040


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,356,880
Number of Sequences: 3902068
Number of extensions: 7356880
Number of successful extensions: 159664
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 159438
Number of HSP's gapped (non-prelim): 226
length of query: 632
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 609
effective length of database: 17,143,297,704
effective search space: 10440268301736
effective search space used: 10440268301736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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