Clone Name | rbasd27g10 |
---|---|
Clone Library Name | barley_pub |
>MRP1_ARATH (Q9C8G9) Multidrug resistance-associated protein 1 (EC 3.6.3.44)| (Glutathione S-conjugate transporting ATPase 1) (ATP-energized glutathione S-conjugate pump 1) Length = 1622 Score = 120 bits (301), Expect = 4e-27 Identities = 60/125 (48%), Positives = 80/125 (64%), Gaps = 1/125 (0%) Frame = -3 Query: 658 EESKLQDIQRKWAASNRWXXXXXXXXXXXXXXXXXXXXXLEVAEGNSILRKTKDAVITLQ 479 ++S+ + QRKW AS+RW LE+ + NSIL+KTKDAV+TL+ Sbjct: 1497 DDSQPLEGQRKWQASSRWAAAAQFALAVSLTSSHNDLQSLEIEDDNSILKKTKDAVVTLR 1556 Query: 478 SVLEGKHNTEIEESLTEYQVPPDRWWSSLYKVIEGLATMSKLGRNRRQ-PGYSFENHGSI 302 SVLEGKH+ EIE+SL + + +RWW SLYK++EGLA MS+L RNR Q P Y+ E S Sbjct: 1557 SVLEGKHDKEIEDSLNQSDISRERWWPSLYKMVEGLAVMSRLARNRMQHPDYNLEGK-SF 1615 Query: 301 DWDQI 287 DWD + Sbjct: 1616 DWDNV 1620
>MRP2_ARATH (Q42093) Multidrug resistance-associated protein 2 (EC 3.6.3.44)| (Glutathione S-conjugate transporting ATPase 2) (ATP-energized glutathione S-conjugate pump 2) Length = 1623 Score = 114 bits (285), Expect = 3e-25 Identities = 62/137 (45%), Positives = 86/137 (62%), Gaps = 1/137 (0%) Frame = -3 Query: 694 LVLGNGEERLRKEESKLQDIQRKWAASNRWXXXXXXXXXXXXXXXXXXXXXLEVAEGNSI 515 LVL N +R + + LQ QRKW AS+RW LE+ + +SI Sbjct: 1489 LVLDN--KRAKDDSHHLQG-QRKWLASSRWAAAAQFALAASLTSSHNDLQSLEIEDDSSI 1545 Query: 514 LRKTKDAVITLQSVLEGKHNTEIEESLTEYQVPPDRWWSSLYKVIEGLATMSKLGRNR-R 338 L++T DAV+TL+SVLEGKH+ EI ESL E+ + + W SSLY+++EGLA MS+L RNR + Sbjct: 1546 LKRTNDAVVTLRSVLEGKHDKEIAESLEEHNISREGWLSSLYRMVEGLAVMSRLARNRMQ 1605 Query: 337 QPGYSFENHGSIDWDQI 287 QP Y+FE + + DWD + Sbjct: 1606 QPDYNFEGN-TFDWDNV 1621
>LTBP2_MOUSE (O08999) Latent transforming growth factor beta-binding protein 2| precursor (LTBP-2) Length = 1813 Score = 32.0 bits (71), Expect = 1.8 Identities = 17/58 (29%), Positives = 27/58 (46%) Frame = +1 Query: 259 ALQCQCSTPKFDPSQ*TRGFQNCNQVADGCDPVCSSWRGLR*LCKVTTTTYQVEPDTQ 432 + C C T F PS + + ++ D DPVC +WR C+ + +Y+ D Q Sbjct: 1230 SFSCLCETASFQPSPDSGECLDIDECEDREDPVCGAWR-----CENSPGSYRCILDCQ 1282
>SYR1_BACHD (Q9K6C1) Arginyl-tRNA synthetase 1 (EC 6.1.1.19) (Arginine--tRNA| ligase 1) (ArgRS 1) Length = 556 Score = 30.8 bits (68), Expect = 4.1 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 8/76 (10%) Frame = -3 Query: 451 EIEESLTEYQVPPDRWWS--SLY---KVIEGLATMSKLGRNRRQPG---YSFENHGSIDW 296 +I+ L E++VP D W+S SLY KV + L + + G+ Q G + +G D Sbjct: 245 KIKSDLEEFRVPFDNWYSETSLYTTGKVEKTLNVLKEKGKTYEQDGALWFRSTEYGD-DK 303 Query: 295 DQI*VLNTGIAMLLNP 248 D++ V N G L P Sbjct: 304 DRVLVKNDGSYTYLTP 319
>VPS16_MOUSE (Q920Q4) Vacuolar protein sorting 16 (mVPS16)| Length = 839 Score = 29.6 bits (65), Expect = 9.1 Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 4/58 (6%) Frame = -3 Query: 487 TLQSVLEGKHNTEIEESLTEYQVPPDR-WWSSLYKV--IEGLATMSKLGRNRRQP-GY 326 T+ +++ G HN E+ ++++P R WW L + +E + K ++++ P GY Sbjct: 699 TVTTLILGGHNKRAEQLARDFRIPDKRLWWLKLAALADLEDWEELEKFSKSKKSPIGY 756
>VPS16_HUMAN (Q9H269) Vacuolar protein sorting 16 (hVPS16)| Length = 839 Score = 29.6 bits (65), Expect = 9.1 Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 4/58 (6%) Frame = -3 Query: 487 TLQSVLEGKHNTEIEESLTEYQVPPDR-WWSSLYKV--IEGLATMSKLGRNRRQP-GY 326 T+ +++ G HN E+ ++++P R WW L + +E + K ++++ P GY Sbjct: 699 TVTTLILGGHNKRAEQLARDFRIPDKRLWWLKLTALADLEDWEELEKFSKSKKSPIGY 756 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 100,581,027 Number of Sequences: 219361 Number of extensions: 2036532 Number of successful extensions: 4963 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 4807 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4962 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6912958834 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)