Clone Name | rbasd27g06 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_189456.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1098 Score = 240 bits (121), Expect = 5e-60 Identities = 288/343 (83%), Gaps = 3/343 (0%) Strand = Plus / Minus Query: 162 cttggttgggtaggaggccatcttgttgatgccgcagaggccctcgccgttgctggtgcc 221 |||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| Sbjct: 1089 cttggttgggtaggaggccatcttgttgatgccgcagaggccgtcgtgcttgccggtgcc 1030 Query: 222 cctcttcatcctgatgtaacccttctcgccccactgggcgccccacgagttcctcacgat 281 |||| |||||| |||||| |||||||| ||||| || | |||||||||||| ||||||| Sbjct: 1029 cctcctcatccggatgtaccccttctcaccccaatgcgatccccacgagttcttcacgat 970 Query: 282 gatgtagtcgtggcccttccccttgtccgacccgtacccgaccgccgccacgccgtgatc 341 |||||| ||||| ||||| | || ||| |||||| || || |||| |||||| ||||| Sbjct: 969 gatgtaatcgtgtcccttgc---tggccgtcccgtatccaacggccgtcacgccatgatc 913 Query: 342 tagctgcgcgccgcatggaccgtcgaaaactcccccgctgtagaactggaagtgcctgcc 401 ||| ||| |||||| ||||| || || || |||||||||||||||||||||| |||||| Sbjct: 912 cagccgcgtgccgcacggaccatcaaacacacccccgctgtagaactggaagttcctgcc 853 Query: 402 ggaggcctcgatggccacggacacgggctggtgggcgagagccttgatcagcgcctgctc 461 |||||||||||||| ||| |||||||||||||| || ||||||| ||| |||||||| Sbjct: 852 tgaggcctcgatggcgacgctgacgggctggtgggccagggccttgagcagggcctgctc 793 Query: 462 gtcattggccggcacatcctcgtagccgctgatcgtcaccgcc 504 || || |||||| |||||||| ||| ||| ||||||||| Sbjct: 792 gttgttcctcggcacgtcctcgtacccggagatggtcaccgcc 750 Score = 85.7 bits (43), Expect = 2e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 531 gcagctgccttcctccatgaggtaggggtacgcctcctcggtgtgcagcccgccactgga 590 |||| ||||||||||||| ||||| ||||| | |||||||||||| || ||||| ||| Sbjct: 705 gcaggtgccttcctccatcaggtacgggtaggactcctcggtgtggaggccgccgttggc 646 Query: 591 cgcgatgtaggagaaggcgtagtccat 617 |||||||||||||||||||||||||| Sbjct: 645 ggcgatgtaggagaaggcgtagtccat 619
>dbj|AK119182.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-H03, full insert sequence Length = 1377 Score = 240 bits (121), Expect = 5e-60 Identities = 288/343 (83%), Gaps = 3/343 (0%) Strand = Plus / Minus Query: 162 cttggttgggtaggaggccatcttgttgatgccgcagaggccctcgccgttgctggtgcc 221 |||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| Sbjct: 1139 cttggttgggtaggaggccatcttgttgatgccgcagaggccgtcgtgcttgccggtgcc 1080 Query: 222 cctcttcatcctgatgtaacccttctcgccccactgggcgccccacgagttcctcacgat 281 |||| |||||| |||||| |||||||| ||||| || | |||||||||||| ||||||| Sbjct: 1079 cctcctcatccggatgtaccccttctcaccccaatgcgatccccacgagttcttcacgat 1020 Query: 282 gatgtagtcgtggcccttccccttgtccgacccgtacccgaccgccgccacgccgtgatc 341 |||||| ||||| ||||| | || ||| |||||| || || |||| |||||| ||||| Sbjct: 1019 gatgtaatcgtgtcccttgc---tggccgtcccgtatccaacggccgtcacgccatgatc 963 Query: 342 tagctgcgcgccgcatggaccgtcgaaaactcccccgctgtagaactggaagtgcctgcc 401 ||| ||| |||||| ||||| || || || |||||||||||||||||||||| |||||| Sbjct: 962 cagccgcgtgccgcacggaccatcaaacacacccccgctgtagaactggaagttcctgcc 903 Query: 402 ggaggcctcgatggccacggacacgggctggtgggcgagagccttgatcagcgcctgctc 461 |||||||||||||| ||| |||||||||||||| || ||||||| ||| |||||||| Sbjct: 902 tgaggcctcgatggcgacgctgacgggctggtgggccagggccttgagcagggcctgctc 843 Query: 462 gtcattggccggcacatcctcgtagccgctgatcgtcaccgcc 504 || || |||||| |||||||| ||| ||| ||||||||| Sbjct: 842 gttgttcctcggcacgtcctcgtacccggagatggtcaccgcc 800 Score = 85.7 bits (43), Expect = 2e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 531 gcagctgccttcctccatgaggtaggggtacgcctcctcggtgtgcagcccgccactgga 590 |||| ||||||||||||| ||||| ||||| | |||||||||||| || ||||| ||| Sbjct: 755 gcaggtgccttcctccatcaggtacgggtaggactcctcggtgtggaggccgccgttggc 696 Query: 591 cgcgatgtaggagaaggcgtagtccat 617 |||||||||||||||||||||||||| Sbjct: 695 ggcgatgtaggagaaggcgtagtccat 669
>dbj|AK106011.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-B02, full insert sequence Length = 1377 Score = 240 bits (121), Expect = 5e-60 Identities = 288/343 (83%), Gaps = 3/343 (0%) Strand = Plus / Minus Query: 162 cttggttgggtaggaggccatcttgttgatgccgcagaggccctcgccgttgctggtgcc 221 |||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| Sbjct: 1139 cttggttgggtaggaggccatcttgttgatgccgcagaggccgtcgtgcttgccggtgcc 1080 Query: 222 cctcttcatcctgatgtaacccttctcgccccactgggcgccccacgagttcctcacgat 281 |||| |||||| |||||| |||||||| ||||| || | |||||||||||| ||||||| Sbjct: 1079 cctcctcatccggatgtaccccttctcaccccaatgcgatccccacgagttcttcacgat 1020 Query: 282 gatgtagtcgtggcccttccccttgtccgacccgtacccgaccgccgccacgccgtgatc 341 |||||| ||||| ||||| | || ||| |||||| || || |||| |||||| ||||| Sbjct: 1019 gatgtaatcgtgtcccttgc---tggccgtcccgtatccaacggccgtcacgccatgatc 963 Query: 342 tagctgcgcgccgcatggaccgtcgaaaactcccccgctgtagaactggaagtgcctgcc 401 ||| ||| |||||| ||||| || || || |||||||||||||||||||||| |||||| Sbjct: 962 cagccgcgtgccgcacggaccatcaaacacacccccgctgtagaactggaagttcctgcc 903 Query: 402 ggaggcctcgatggccacggacacgggctggtgggcgagagccttgatcagcgcctgctc 461 |||||||||||||| ||| |||||||||||||| || ||||||| ||| |||||||| Sbjct: 902 tgaggcctcgatggcgacgctgacgggctggtgggccagggccttgagcagggcctgctc 843 Query: 462 gtcattggccggcacatcctcgtagccgctgatcgtcaccgcc 504 || || |||||| |||||||| ||| ||| ||||||||| Sbjct: 842 gttgttcctcggcacgtcctcgtacccggagatggtcaccgcc 800 Score = 85.7 bits (43), Expect = 2e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 531 gcagctgccttcctccatgaggtaggggtacgcctcctcggtgtgcagcccgccactgga 590 |||| ||||||||||||| ||||| ||||| | |||||||||||| || ||||| ||| Sbjct: 755 gcaggtgccttcctccatcaggtacgggtaggactcctcggtgtggaggccgccgttggc 696 Query: 591 cgcgatgtaggagaaggcgtagtccat 617 |||||||||||||||||||||||||| Sbjct: 695 ggcgatgtaggagaaggcgtagtccat 669
>dbj|AK105881.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-D02, full insert sequence Length = 1519 Score = 240 bits (121), Expect = 5e-60 Identities = 288/343 (83%), Gaps = 3/343 (0%) Strand = Plus / Minus Query: 162 cttggttgggtaggaggccatcttgttgatgccgcagaggccctcgccgttgctggtgcc 221 |||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| Sbjct: 1139 cttggttgggtaggaggccatcttgttgatgccgcagaggccgtcgtgcttgccggtgcc 1080 Query: 222 cctcttcatcctgatgtaacccttctcgccccactgggcgccccacgagttcctcacgat 281 |||| |||||| |||||| |||||||| ||||| || | |||||||||||| ||||||| Sbjct: 1079 cctcctcatccggatgtaccccttctcaccccaatgcgatccccacgagttcttcacgat 1020 Query: 282 gatgtagtcgtggcccttccccttgtccgacccgtacccgaccgccgccacgccgtgatc 341 |||||| ||||| ||||| | || ||| |||||| || || |||| |||||| ||||| Sbjct: 1019 gatgtaatcgtgtcccttgc---tggccgtcccgtatccaacggccgtcacgccatgatc 963 Query: 342 tagctgcgcgccgcatggaccgtcgaaaactcccccgctgtagaactggaagtgcctgcc 401 ||| ||| |||||| ||||| || || || |||||||||||||||||||||| |||||| Sbjct: 962 cagccgcgtgccgcacggaccatcaaacacacccccgctgtagaactggaagttcctgcc 903 Query: 402 ggaggcctcgatggccacggacacgggctggtgggcgagagccttgatcagcgcctgctc 461 |||||||||||||| ||| |||||||||||||| || ||||||| ||| |||||||| Sbjct: 902 tgaggcctcgatggcgacgctgacgggctggtgggccagggccttgagcagggcctgctc 843 Query: 462 gtcattggccggcacatcctcgtagccgctgatcgtcaccgcc 504 || || |||||| |||||||| ||| ||| ||||||||| Sbjct: 842 gttgttcctcggcacgtcctcgtacccggagatggtcaccgcc 800 Score = 85.7 bits (43), Expect = 2e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 531 gcagctgccttcctccatgaggtaggggtacgcctcctcggtgtgcagcccgccactgga 590 |||| ||||||||||||| ||||| ||||| | |||||||||||| || ||||| ||| Sbjct: 755 gcaggtgccttcctccatcaggtacgggtaggactcctcggtgtggaggccgccgttggc 696 Query: 591 cgcgatgtaggagaaggcgtagtccat 617 |||||||||||||||||||||||||| Sbjct: 695 ggcgatgtaggagaaggcgtagtccat 669
>dbj|AK059528.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-D05, full insert sequence Length = 1332 Score = 240 bits (121), Expect = 5e-60 Identities = 288/343 (83%), Gaps = 3/343 (0%) Strand = Plus / Minus Query: 162 cttggttgggtaggaggccatcttgttgatgccgcagaggccctcgccgttgctggtgcc 221 |||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| Sbjct: 1139 cttggttgggtaggaggccatcttgttgatgccgcagaggccgtcgtgcttgccggtgcc 1080 Query: 222 cctcttcatcctgatgtaacccttctcgccccactgggcgccccacgagttcctcacgat 281 |||| |||||| |||||| |||||||| ||||| || | |||||||||||| ||||||| Sbjct: 1079 cctcctcatccggatgtaccccttctcaccccaatgcgatccccacgagttcttcacgat 1020 Query: 282 gatgtagtcgtggcccttccccttgtccgacccgtacccgaccgccgccacgccgtgatc 341 |||||| ||||| ||||| | || ||| |||||| || || |||| |||||| ||||| Sbjct: 1019 gatgtaatcgtgtcccttgc---tggccgtcccgtatccaacggccgtcacgccatgatc 963 Query: 342 tagctgcgcgccgcatggaccgtcgaaaactcccccgctgtagaactggaagtgcctgcc 401 ||| ||| |||||| ||||| || || || |||||||||||||||||||||| |||||| Sbjct: 962 cagccgcgtgccgcacggaccatcaaacacacccccgctgtagaactggaagttcctgcc 903 Query: 402 ggaggcctcgatggccacggacacgggctggtgggcgagagccttgatcagcgcctgctc 461 |||||||||||||| ||| |||||||||||||| || ||||||| ||| |||||||| Sbjct: 902 tgaggcctcgatggcgacgctgacgggctggtgggccagggccttgagcagggcctgctc 843 Query: 462 gtcattggccggcacatcctcgtagccgctgatcgtcaccgcc 504 || || |||||| |||||||| ||| ||| ||||||||| Sbjct: 842 gttgttcctcggcacgtcctcgtacccggagatggtcaccgcc 800 Score = 85.7 bits (43), Expect = 2e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 531 gcagctgccttcctccatgaggtaggggtacgcctcctcggtgtgcagcccgccactgga 590 |||| ||||||||||||| ||||| ||||| | |||||||||||| || ||||| ||| Sbjct: 755 gcaggtgccttcctccatcaggtacgggtaggactcctcggtgtggaggccgccgttggc 696 Query: 591 cgcgatgtaggagaaggcgtagtccat 617 |||||||||||||||||||||||||| Sbjct: 695 ggcgatgtaggagaaggcgtagtccat 669
>gb|AY104930.1| Zea mays PCO132946 mRNA sequence Length = 1422 Score = 161 bits (81), Expect = 3e-36 Identities = 150/173 (86%) Strand = Plus / Minus Query: 313 ccgtacccgaccgccgccacgccgtgatctagctgcgcgccgcatggaccgtcgaaaact 372 ||||| || ||||||||||||||||| || |||| || ||||| || || ||||| || Sbjct: 996 ccgtagcccaccgccgccacgccgtggtccagctccgacccgcacggtccatcgaacacg 937 Query: 373 cccccgctgtagaactggaagtgcctgccggaggcctcgatggccacggacacgggctgg 432 |||||||||||||||||||||||||| ||||| ||||||||||| ||| ||||||||| Sbjct: 936 cccccgctgtagaactggaagtgcctcccggacgcctcgatggcgacgctgacgggctgg 877 Query: 433 tgggcgagagccttgatcagcgcctgctcgtcattggccggcacatcctcgta 485 |||||||| ||||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 876 tgggcgagggccttgacgagcgcctgctcgtcgttggccggcacgtcctcgta 824 Score = 153 bits (77), Expect = 8e-34 Identities = 125/141 (88%) Strand = Plus / Minus Query: 159 gtccttggttgggtaggaggccatcttgttgatgccgcagaggccctcgccgttgctggt 218 ||||||||| |||||||| ||||||||||||||||||||||||||||| |||| ||| Sbjct: 1144 gtccttggtcgggtaggatgccatcttgttgatgccgcagaggccctccggcttgccggt 1085 Query: 219 gcccctcttcatcctgatgtaacccttctcgccccactgggcgccccacgagttcctcac 278 |||||||||||| | |||||| |||||||||||||| |||| ||||||||||||| | || Sbjct: 1084 gcccctcttcatgcggatgtagcccttctcgccccagtgggtgccccacgagttcttgac 1025 Query: 279 gatgatgtagtcgtggccctt 299 |||||||||||| || ||||| Sbjct: 1024 gatgatgtagtcctgcccctt 1004 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 538 ccttcctccatgaggtaggggtacgcctcctcggtgtgcagcccgccactggacgcgatg 597 ||||||||||||||||| |||||||||||||||| | | |||||| | | || |||||| Sbjct: 771 ccttcctccatgaggtacgggtacgcctcctcggagcggagcccggcgccggtggcgatg 712 Query: 598 taggagaaggcgtagtccat 617 | |||||||||| |||||| Sbjct: 711 aacgagaaggcgttgtccat 692
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 149 bits (75), Expect = 1e-32 Identities = 170/201 (84%), Gaps = 3/201 (1%) Strand = Plus / Minus Query: 162 cttggttgggtaggaggccatcttgttgatgccgcagaggccctcgccgttgctggtgcc 221 |||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| Sbjct: 42849517 cttggttgggtaggaggccatcttgttgatgccgcagaggccgtcgtgcttgccggtgcc 42849458 Query: 222 cctcttcatcctgatgtaacccttctcgccccactgggcgccccacgagttcctcacgat 281 |||| |||||| |||||| |||||||| ||||| || | |||||||||||| ||||||| Sbjct: 42849457 cctcctcatccggatgtaccccttctcaccccaatgcgatccccacgagttcttcacgat 42849398 Query: 282 gatgtagtcgtggcccttccccttgtccgacccgtacccgaccgccgccacgccgtgatc 341 |||||| ||||| ||||| | || ||| |||||| || || |||| |||||| ||||| Sbjct: 42849397 gatgtaatcgtgtcccttgc---tggccgtcccgtatccaacggccgtcacgccatgatc 42849341 Query: 342 tagctgcgcgccgcatggacc 362 ||| ||| |||||| ||||| Sbjct: 42849340 cagccgcgtgccgcacggacc 42849320 Score = 101 bits (51), Expect = 3e-18 Identities = 111/131 (84%) Strand = Plus / Minus Query: 374 ccccgctgtagaactggaagtgcctgccggaggcctcgatggccacggacacgggctggt 433 ||||||||||||||||||||| |||||| |||||||||||||| ||| |||||||||| Sbjct: 42848944 ccccgctgtagaactggaagttcctgcctgaggcctcgatggcgacgctgacgggctggt 42848885 Query: 434 gggcgagagccttgatcagcgcctgctcgtcattggccggcacatcctcgtagccgctga 493 |||| || ||||||| ||| |||||||||| || |||||| |||||||| ||| || Sbjct: 42848884 gggccagggccttgagcagggcctgctcgttgttcctcggcacgtcctcgtacccggaga 42848825 Query: 494 tcgtcaccgcc 504 | ||||||||| Sbjct: 42848824 tggtcaccgcc 42848814 Score = 85.7 bits (43), Expect = 2e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 531 gcagctgccttcctccatgaggtaggggtacgcctcctcggtgtgcagcccgccactgga 590 |||| ||||||||||||| ||||| ||||| | |||||||||||| || ||||| ||| Sbjct: 42848769 gcaggtgccttcctccatcaggtacgggtaggactcctcggtgtggaggccgccgttggc 42848710 Query: 591 cgcgatgtaggagaaggcgtagtccat 617 |||||||||||||||||||||||||| Sbjct: 42848709 ggcgatgtaggagaaggcgtagtccat 42848683
>dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518C01 Length = 173555 Score = 149 bits (75), Expect = 1e-32 Identities = 170/201 (84%), Gaps = 3/201 (1%) Strand = Plus / Minus Query: 162 cttggttgggtaggaggccatcttgttgatgccgcagaggccctcgccgttgctggtgcc 221 |||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| Sbjct: 43251 cttggttgggtaggaggccatcttgttgatgccgcagaggccgtcgtgcttgccggtgcc 43192 Query: 222 cctcttcatcctgatgtaacccttctcgccccactgggcgccccacgagttcctcacgat 281 |||| |||||| |||||| |||||||| ||||| || | |||||||||||| ||||||| Sbjct: 43191 cctcctcatccggatgtaccccttctcaccccaatgcgatccccacgagttcttcacgat 43132 Query: 282 gatgtagtcgtggcccttccccttgtccgacccgtacccgaccgccgccacgccgtgatc 341 |||||| ||||| ||||| | || ||| |||||| || || |||| |||||| ||||| Sbjct: 43131 gatgtaatcgtgtcccttgc---tggccgtcccgtatccaacggccgtcacgccatgatc 43075 Query: 342 tagctgcgcgccgcatggacc 362 ||| ||| |||||| ||||| Sbjct: 43074 cagccgcgtgccgcacggacc 43054 Score = 101 bits (51), Expect = 3e-18 Identities = 111/131 (84%) Strand = Plus / Minus Query: 374 ccccgctgtagaactggaagtgcctgccggaggcctcgatggccacggacacgggctggt 433 ||||||||||||||||||||| |||||| |||||||||||||| ||| |||||||||| Sbjct: 42678 ccccgctgtagaactggaagttcctgcctgaggcctcgatggcgacgctgacgggctggt 42619 Query: 434 gggcgagagccttgatcagcgcctgctcgtcattggccggcacatcctcgtagccgctga 493 |||| || ||||||| ||| |||||||||| || |||||| |||||||| ||| || Sbjct: 42618 gggccagggccttgagcagggcctgctcgttgttcctcggcacgtcctcgtacccggaga 42559 Query: 494 tcgtcaccgcc 504 | ||||||||| Sbjct: 42558 tggtcaccgcc 42548 Score = 85.7 bits (43), Expect = 2e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 531 gcagctgccttcctccatgaggtaggggtacgcctcctcggtgtgcagcccgccactgga 590 |||| ||||||||||||| ||||| ||||| | |||||||||||| || ||||| ||| Sbjct: 42503 gcaggtgccttcctccatcaggtacgggtaggactcctcggtgtggaggccgccgttggc 42444 Query: 591 cgcgatgtaggagaaggcgtagtccat 617 |||||||||||||||||||||||||| Sbjct: 42443 ggcgatgtaggagaaggcgtagtccat 42417
>gb|AC129716.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0068N01, complete sequence Length = 152233 Score = 129 bits (65), Expect = 1e-26 Identities = 125/145 (86%) Strand = Plus / Minus Query: 155 agttgtccttggttgggtaggaggccatcttgttgatgccgcagaggccctcgccgttgc 214 ||||||||||||| ||||| |||||||||||||||||||| || || || || || |||| Sbjct: 118397 agttgtccttggtggggtaagaggccatcttgttgatgccacatagaccttcacccttgc 118338 Query: 215 tggtgcccctcttcatcctgatgtaacccttctcgccccactgggcgccccacgagttcc 274 |||||||||||||| | |||||| |||||||||||||| || | |||||| |||||| Sbjct: 118337 cagtgcccctcttcatgcggatgtaccccttctcgccccaatgtgggccccatgagttct 118278 Query: 275 tcacgatgatgtagtcgtggccctt 299 ||||||||||||| || |||||||| Sbjct: 118277 tcacgatgatgtaatcttggccctt 118253 Score = 111 bits (56), Expect = 3e-21 Identities = 198/244 (81%), Gaps = 6/244 (2%) Strand = Plus / Minus Query: 374 ccccgctgtagaactggaagtgcctgccggaggcctcgatggccacggacacgggctggt 433 |||||||||||||||||||||| | ||||| || || ||||| ||| || ||||| | Sbjct: 117294 ccccgctgtagaactggaagtggcgaccggatgcttcaatggcgacgctgacaggctgat 117235 Query: 434 gggcgagagccttgatcagcgcctgctcgtcattggccggcacatcctcgtagccgctga 493 | || | ||||| | ||||||||||||||| ||||||||||| |||||||| ||| || Sbjct: 117234 gcgccaacgccttcaccagcgcctgctcgtcgttggccggcacgtcctcgtacccggaga 117175 Query: 494 tcgtcaccgcctccgactcggccttcttgccgtcgccgcagctgccttcctccatgaggt 553 | |||||| || ||| || ||||| || ||| ||||| ||| ||||||||| || Sbjct: 117174 tggtcaccaccgccg---cgcccttc---ccctcgtcgcagtcgccctcctccatggcgt 117121 Query: 554 aggggtacgcctcctcggtgtgcagcccgccactggacgcgatgtaggagaaggcgtagt 613 | |||||||||||||| ||| |||||||||| |||| |||||||||||||||||||||| Sbjct: 117120 acgggtacgcctcctccgtgcgcagcccgccggtggaggcgatgtaggagaaggcgtagt 117061 Query: 614 ccat 617 |||| Sbjct: 117060 ccat 117057
>gb|AY335487.1| Oryza sativa (japonica cultivar-group) cysteine protease CP1 mRNA, complete cds Length = 1227 Score = 129 bits (65), Expect = 1e-26 Identities = 125/145 (86%) Strand = Plus / Minus Query: 155 agttgtccttggttgggtaggaggccatcttgttgatgccgcagaggccctcgccgttgc 214 ||||||||||||| ||||| |||||||||||||||||||| || || || || || |||| Sbjct: 1090 agttgtccttggtggggtaagaggccatcttgttgatgccacatagaccttcacccttgc 1031 Query: 215 tggtgcccctcttcatcctgatgtaacccttctcgccccactgggcgccccacgagttcc 274 |||||||||||||| | |||||| |||||||||||||| || | |||||| |||||| Sbjct: 1030 cagtgcccctcttcatgcggatgtaccccttctcgccccaatgtgggccccatgagttct 971 Query: 275 tcacgatgatgtagtcgtggccctt 299 ||||||||||||| || |||||||| Sbjct: 970 tcacgatgatgtaatcttggccctt 946 Score = 129 bits (65), Expect = 1e-26 Identities = 237/293 (80%), Gaps = 6/293 (2%) Strand = Plus / Minus Query: 325 gccgccacgccgtgatctagctgcgcgccgcatggaccgtcgaaaactcccccgctgtag 384 |||| ||| |||||||| || ||| | ||||||||||| || || || |||||||||||| Sbjct: 926 gccgtcacaccgtgatccagttgctcaccgcatggaccatcaaacacacccccgctgtag 867 Query: 385 aactggaagtgcctgccggaggcctcgatggccacggacacgggctggtgggcgagagcc 444 ||||||||||| | ||||| || || ||||| ||| || ||||| || || | ||| Sbjct: 866 aactggaagtggcgaccggatgcttcaatggcgacgctgacaggctgatgcgccaacgcc 807 Query: 445 ttgatcagcgcctgctcgtcattggccggcacatcctcgtagccgctgatcgtcaccgcc 504 || | ||||||||||||||| ||||||||||| |||||||| ||| ||| |||||| || Sbjct: 806 ttcaccagcgcctgctcgtcgttggccggcacgtcctcgtacccggagatggtcaccacc 747 Query: 505 tccgactcggccttcttgccgtcgccgcagctgccttcctccatgaggtaggggtacgcc 564 ||| || ||||| || ||| ||||| ||| ||||||||| ||| ||||||||| Sbjct: 746 gccg---cgcccttc---ccctcgtcgcagtcgccctcctccatggcgtacgggtacgcc 693 Query: 565 tcctcggtgtgcagcccgccactggacgcgatgtaggagaaggcgtagtccat 617 ||||| ||| |||||||||| |||| |||||||||||||||||||||||||| Sbjct: 692 tcctccgtgcgcagcccgccggtggaggcgatgtaggagaaggcgtagtccat 640
>gb|AC079022.2|AC079022 Oryza sativa chromosome 5 clone P0574H01, complete sequence Length = 151589 Score = 129 bits (65), Expect = 1e-26 Identities = 125/145 (86%) Strand = Plus / Minus Query: 155 agttgtccttggttgggtaggaggccatcttgttgatgccgcagaggccctcgccgttgc 214 ||||||||||||| ||||| |||||||||||||||||||| || || || || || |||| Sbjct: 56548 agttgtccttggtggggtaagaggccatcttgttgatgccacatagaccttcacccttgc 56489 Query: 215 tggtgcccctcttcatcctgatgtaacccttctcgccccactgggcgccccacgagttcc 274 |||||||||||||| | |||||| |||||||||||||| || | |||||| |||||| Sbjct: 56488 cagtgcccctcttcatgcggatgtaccccttctcgccccaatgtgggccccatgagttct 56429 Query: 275 tcacgatgatgtagtcgtggccctt 299 ||||||||||||| || |||||||| Sbjct: 56428 tcacgatgatgtaatcttggccctt 56404 Score = 111 bits (56), Expect = 3e-21 Identities = 198/244 (81%), Gaps = 6/244 (2%) Strand = Plus / Minus Query: 374 ccccgctgtagaactggaagtgcctgccggaggcctcgatggccacggacacgggctggt 433 |||||||||||||||||||||| | ||||| || || ||||| ||| || ||||| | Sbjct: 55445 ccccgctgtagaactggaagtggcgaccggatgcttcaatggcgacgctgacaggctgat 55386 Query: 434 gggcgagagccttgatcagcgcctgctcgtcattggccggcacatcctcgtagccgctga 493 | || | ||||| | ||||||||||||||| ||||||||||| |||||||| ||| || Sbjct: 55385 gcgccaacgccttcaccagcgcctgctcgtcgttggccggcacgtcctcgtacccggaga 55326 Query: 494 tcgtcaccgcctccgactcggccttcttgccgtcgccgcagctgccttcctccatgaggt 553 | |||||| || ||| || ||||| || ||| ||||| ||| ||||||||| || Sbjct: 55325 tggtcaccaccgccg---cgcccttc---ccctcgtcgcagtcgccctcctccatggcgt 55272 Query: 554 aggggtacgcctcctcggtgtgcagcccgccactggacgcgatgtaggagaaggcgtagt 613 | |||||||||||||| ||| |||||||||| |||| |||||||||||||||||||||| Sbjct: 55271 acgggtacgcctcctccgtgcgcagcccgccggtggaggcgatgtaggagaaggcgtagt 55212 Query: 614 ccat 617 |||| Sbjct: 55211 ccat 55208
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 129 bits (65), Expect = 1e-26 Identities = 125/145 (86%) Strand = Plus / Minus Query: 155 agttgtccttggttgggtaggaggccatcttgttgatgccgcagaggccctcgccgttgc 214 ||||||||||||| ||||| |||||||||||||||||||| || || || || || |||| Sbjct: 456750 agttgtccttggtggggtaagaggccatcttgttgatgccacatagaccttcacccttgc 456691 Query: 215 tggtgcccctcttcatcctgatgtaacccttctcgccccactgggcgccccacgagttcc 274 |||||||||||||| | |||||| |||||||||||||| || | |||||| |||||| Sbjct: 456690 cagtgcccctcttcatgcggatgtaccccttctcgccccaatgtgggccccatgagttct 456631 Query: 275 tcacgatgatgtagtcgtggccctt 299 ||||||||||||| || |||||||| Sbjct: 456630 tcacgatgatgtaatcttggccctt 456606 Score = 111 bits (56), Expect = 3e-21 Identities = 198/244 (81%), Gaps = 6/244 (2%) Strand = Plus / Minus Query: 374 ccccgctgtagaactggaagtgcctgccggaggcctcgatggccacggacacgggctggt 433 |||||||||||||||||||||| | ||||| || || ||||| ||| || ||||| | Sbjct: 455647 ccccgctgtagaactggaagtggcgaccggatgcttcaatggcgacgctgacaggctgat 455588 Query: 434 gggcgagagccttgatcagcgcctgctcgtcattggccggcacatcctcgtagccgctga 493 | || | ||||| | ||||||||||||||| ||||||||||| |||||||| ||| || Sbjct: 455587 gcgccaacgccttcaccagcgcctgctcgtcgttggccggcacgtcctcgtacccggaga 455528 Query: 494 tcgtcaccgcctccgactcggccttcttgccgtcgccgcagctgccttcctccatgaggt 553 | |||||| || ||| || ||||| || ||| ||||| ||| ||||||||| || Sbjct: 455527 tggtcaccaccgccg---cgcccttc---ccctcgtcgcagtcgccctcctccatggcgt 455474 Query: 554 aggggtacgcctcctcggtgtgcagcccgccactggacgcgatgtaggagaaggcgtagt 613 | |||||||||||||| ||| |||||||||| |||| |||||||||||||||||||||| Sbjct: 455473 acgggtacgcctcctccgtgcgcagcccgccggtggaggcgatgtaggagaaggcgtagt 455414 Query: 614 ccat 617 |||| Sbjct: 455413 ccat 455410
>dbj|AK106508.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-G09, full insert sequence Length = 1409 Score = 129 bits (65), Expect = 1e-26 Identities = 125/145 (86%) Strand = Plus / Minus Query: 155 agttgtccttggttgggtaggaggccatcttgttgatgccgcagaggccctcgccgttgc 214 ||||||||||||| ||||| |||||||||||||||||||| || || || || || |||| Sbjct: 1148 agttgtccttggtggggtaagaggccatcttgttgatgccacatagaccttcacccttgc 1089 Query: 215 tggtgcccctcttcatcctgatgtaacccttctcgccccactgggcgccccacgagttcc 274 |||||||||||||| | |||||| |||||||||||||| || | |||||| |||||| Sbjct: 1088 cagtgcccctcttcatgcggatgtaccccttctcgccccaatgtgggccccatgagttct 1029 Query: 275 tcacgatgatgtagtcgtggccctt 299 ||||||||||||| || |||||||| Sbjct: 1028 tcacgatgatgtaatcttggccctt 1004 Score = 129 bits (65), Expect = 1e-26 Identities = 237/293 (80%), Gaps = 6/293 (2%) Strand = Plus / Minus Query: 325 gccgccacgccgtgatctagctgcgcgccgcatggaccgtcgaaaactcccccgctgtag 384 |||| ||| |||||||| || ||| | ||||||||||| || || || |||||||||||| Sbjct: 984 gccgtcacaccgtgatccagttgctcaccgcatggaccatcaaacacacccccgctgtag 925 Query: 385 aactggaagtgcctgccggaggcctcgatggccacggacacgggctggtgggcgagagcc 444 ||||||||||| | ||||| || || ||||| ||| || ||||| || || | ||| Sbjct: 924 aactggaagtggcgaccggatgcttcaatggcgacgctgacaggctgatgcgccaacgcc 865 Query: 445 ttgatcagcgcctgctcgtcattggccggcacatcctcgtagccgctgatcgtcaccgcc 504 || | ||||||||||||||| ||||||||||| |||||||| ||| ||| |||||| || Sbjct: 864 ttcaccagcgcctgctcgtcgttggccggcacgtcctcgtacccggagatggtcaccacc 805 Query: 505 tccgactcggccttcttgccgtcgccgcagctgccttcctccatgaggtaggggtacgcc 564 ||| || ||||| || ||| ||||| ||| ||||||||| ||| ||||||||| Sbjct: 804 gccg---cgcccttc---ccctcgtcgcagtcgccctcctccatggcgtacgggtacgcc 751 Query: 565 tcctcggtgtgcagcccgccactggacgcgatgtaggagaaggcgtagtccat 617 ||||| ||| |||||||||| |||| |||||||||||||||||||||||||| Sbjct: 750 tcctccgtgcgcagcccgccggtggaggcgatgtaggagaaggcgtagtccat 698
>gb|BT016603.1| Zea mays clone Contig436 mRNA sequence Length = 1526 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Minus Query: 381 gtagaactggaagtgcctgccggaggcctcgatggccacggacacgggctggtgggcgag 440 |||||||||||||||| ||| |||||||||||| ||||||||||||||||| || | Sbjct: 999 gtagaactggaagtgcgagccactggcctcgatggcgacggacacgggctggtgcgccac 940 Query: 441 agccttgatcagcgcctgctcgtcattggccggcacatcctcgtagccg 489 ||||| | |||||| |||||| ||||||||||| |||||||||||| Sbjct: 939 cgccttcttgagcgccgactcgtcgttggccggcacgtcctcgtagccg 891 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 234 gatgtaacccttctcgccccactgggcgccccacgagttc 273 |||||| |||||||||||||||| || ||||||||||||| Sbjct: 1143 gatgtaccccttctcgccccactcggggccccacgagttc 1104
>gb|AY112469.1| Zea mays CL13598_-2 mRNA sequence Length = 606 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Plus Query: 381 gtagaactggaagtgcctgccggaggcctcgatggccacggacacgggctggtgggcgag 440 |||||||||||||||| ||| |||||||||||| ||||||||||||||||| || | Sbjct: 447 gtagaactggaagtgcgagccactggcctcgatggcgacggacacgggctggtgcgccac 506 Query: 441 agccttgatcagcgcctgctcgtcattggccggcacatcctcgtagccg 489 ||||| | |||||| |||||| ||||||||||| |||||||||||| Sbjct: 507 cgccttcttgagcgccgactcgtcgttggccggcacgtcctcgtagccg 555 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 234 gatgtaacccttctcgccccactgggcgccccacgagttc 273 |||||| |||||||||||||||| || ||||||||||||| Sbjct: 303 gatgtaccccttctcgccccactcggggccccacgagttc 342
>gb|BT017224.1| Zea mays clone EL01N0302C04.c mRNA sequence Length = 617 Score = 65.9 bits (33), Expect = 1e-07 Identities = 90/109 (82%) Strand = Plus / Minus Query: 381 gtagaactggaagtgcctgccggaggcctcgatggccacggacacgggctggtgggcgag 440 ||||||||||||||| ||| |||||||||||| ||||||||||| || || || | Sbjct: 111 gtagaactggaagtgagagccactggcctcgatggcgacggacacgggatgatgcgccac 52 Query: 441 agccttgatcagcgcctgctcgtcattggccggcacatcctcgtagccg 489 ||||| || |||||| |||||| ||||||||||| |||||||||||| Sbjct: 51 cgccttaatgagcgccgactcgtcgttggccggcacgtcctcgtagccg 3
>ref|XM_474851.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 945 Score = 60.0 bits (30), Expect = 9e-06 Identities = 87/106 (82%) Strand = Plus / Minus Query: 380 tgtagaactggaagtgcctgccggaggcctcgatggccacggacacgggctggtgggcga 439 |||||||||||||||||| | || | | ||||||||||| ||||| ||||||| || | Sbjct: 721 tgtagaactggaagtgccggtcgccgccgtcgatggccaccgacaccggctggttcgcca 662 Query: 440 gagccttgatcagcgcctgctcgtcattggccggcacatcctcgta 485 ||||||| ||||||| |||||| || |||||||| |||||||| Sbjct: 661 cggccttgagcagcgccgcctcgtcgttcgccggcacgtcctcgta 616
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 60.0 bits (30), Expect = 9e-06 Identities = 87/106 (82%) Strand = Plus / Minus Query: 380 tgtagaactggaagtgcctgccggaggcctcgatggccacggacacgggctggtgggcga 439 |||||||||||||||||| | || | | ||||||||||| ||||| ||||||| || | Sbjct: 7213320 tgtagaactggaagtgccggtcgccgccgtcgatggccaccgacaccggctggttcgcca 7213261 Query: 440 gagccttgatcagcgcctgctcgtcattggccggcacatcctcgta 485 ||||||| ||||||| |||||| || |||||||| |||||||| Sbjct: 7213260 cggccttgagcagcgccgcctcgtcgttcgccggcacgtcctcgta 7213215 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 gccccacgagttcctcacgat 281 ||||||||||||||||||||| Sbjct: 33158094 gccccacgagttcctcacgat 33158114
>emb|AL606994.3|OSJN00114 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035O13, complete sequence Length = 143298 Score = 60.0 bits (30), Expect = 9e-06 Identities = 87/106 (82%) Strand = Plus / Minus Query: 380 tgtagaactggaagtgcctgccggaggcctcgatggccacggacacgggctggtgggcga 439 |||||||||||||||||| | || | | ||||||||||| ||||| ||||||| || | Sbjct: 77057 tgtagaactggaagtgccggtcgccgccgtcgatggccaccgacaccggctggttcgcca 76998 Query: 440 gagccttgatcagcgcctgctcgtcattggccggcacatcctcgta 485 ||||||| ||||||| |||||| || |||||||| |||||||| Sbjct: 76997 cggccttgagcagcgccgcctcgtcgttcgccggcacgtcctcgta 76952
>gb|AY781344.1| Oryza sativa (japonica cultivar-group) putative cysteine protease mRNA, complete cds Length = 1279 Score = 60.0 bits (30), Expect = 9e-06 Identities = 87/106 (82%) Strand = Plus / Minus Query: 380 tgtagaactggaagtgcctgccggaggcctcgatggccacggacacgggctggtgggcga 439 |||||||||||||||||| | || | | ||||||||||| ||||| ||||||| || | Sbjct: 940 tgtagaactggaagtgccggtcgccgccgtcgatggccaccgacaccggctggttcgcca 881 Query: 440 gagccttgatcagcgcctgctcgtcattggccggcacatcctcgta 485 ||||||| ||||||| |||||| || |||||||| |||||||| Sbjct: 880 cggccttgagcagcgccgcctcgtcgttcgccggcacgtcctcgta 835
>ref|XM_507329.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1150_A11.17 mRNA Length = 1437 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 225 cttcatcctgatgtaacccttctcgccccactgggcgccccacgagttcctcacgat 281 |||||||| |||||| |||||||| ||||| | ||||||||||||||||| ||||| Sbjct: 1077 cttcatccggatgtagcccttctcaccccagtctgcgccccacgagttcctgacgat 1021
>ref|XM_483741.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1437 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 225 cttcatcctgatgtaacccttctcgccccactgggcgccccacgagttcctcacgat 281 |||||||| |||||| |||||||| ||||| | ||||||||||||||||| ||||| Sbjct: 1077 cttcatccggatgtagcccttctcaccccagtctgcgccccacgagttcctgacgat 1021
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 225 cttcatcctgatgtaacccttctcgccccactgggcgccccacgagttcctcacgat 281 |||||||| |||||| |||||||| ||||| | ||||||||||||||||| ||||| Sbjct: 27868975 cttcatccggatgtagcccttctcaccccagtctgcgccccacgagttcctgacgat 27868919
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 225 cttcatcctgatgtaacccttctcgccccactgggcgccccacgagttcctcacgat 281 |||||||| |||||| |||||||| ||||| | ||||||||||||||||| ||||| Sbjct: 77053 cttcatccggatgtagcccttctcaccccagtctgcgccccacgagttcctgacgat 76997
>dbj|AK105612.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B06, full insert sequence Length = 1351 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 225 cttcatcctgatgtaacccttctcgccccactgggcgccccacgagttcctcacgat 281 |||||||| |||||| |||||||| ||||| | ||||||||||||||||| ||||| Sbjct: 991 cttcatccggatgtagcccttctcaccccagtctgcgccccacgagttcctgacgat 935
>dbj|AK099308.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144C09, full insert sequence Length = 1437 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 225 cttcatcctgatgtaacccttctcgccccactgggcgccccacgagttcctcacgat 281 |||||||| |||||| |||||||| ||||| | ||||||||||||||||| ||||| Sbjct: 1077 cttcatccggatgtagcccttctcaccccagtctgcgccccacgagttcctgacgat 1021
>dbj|AK072235.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001J24, full insert sequence Length = 1437 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 225 cttcatcctgatgtaacccttctcgccccactgggcgccccacgagttcctcacgat 281 |||||||| |||||| |||||||| ||||| | ||||||||||||||||| ||||| Sbjct: 1077 cttcatccggatgtagcccttctcaccccagtctgcgccccacgagttcctgacgat 1021
>gb|AY111799.1| Zea mays CL872_-2 mRNA sequence Length = 1761 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 246 ctcgccccactgggcgccccacgagttcctcacgat 281 |||||||||||||| ||||||||||||| ||||||| Sbjct: 1111 ctcgccccactgggtgccccacgagttcttcacgat 1076
>gb|AF019146.1|AF019146 Zea mays cysteine proteinase Mir2 (mir2) mRNA, complete cds Length = 1761 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 246 ctcgccccactgggcgccccacgagttcctcacgat 281 |||||||||||||| ||||||||||||| ||||||| Sbjct: 1111 ctcgccccactgggtgccccacgagttcttcacgat 1076
>gb|AY504967.1| Iris hollandica putative cysteine protease 2 (CYS2) mRNA, complete cds Length = 1282 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 228 catcctgatgtaacccttctcgccccactgggcgccccacgagttcctcac 278 |||||||||||| |||||||| ||||||| || ||||| ||||||||||| Sbjct: 966 catcctgatgtagcccttctctccccactcagctccccatgagttcctcac 916
>emb|Z97022.1|HVZ97022 Hordeum vulgare gene encoding cysteine proteinase Length = 5593 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 411 gatggccacggacacgggctggtgggcgagagccttgatcagcgcctgctcgtcattggc 470 |||||||||||||||||||||||| || | ||| ||||||||| ||||| ||||| Sbjct: 4663 gatggccacggacacgggctggtgcgccacggccgccatcagcgccgcctcgttgttggc 4604 Query: 471 cggcacatcctcgta 485 |||||| |||||||| Sbjct: 4603 cggcacgtcctcgta 4589
>emb|Z97023.1|HVZ97023 Hordeum vulgare mRNA encoding cysteine endopeptidase EP-A Length = 1299 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 228 catcctgatgtaacccttctcgccccactgggcgccccacgagttcctcacgat 281 ||||||||||||||||||||| ||||| | | |||||||||||| ||||||| Sbjct: 1020 catcctgatgtaacccttctcaccccagtcctctccccacgagttcttcacgat 967
>emb|Z97021.1|HVZ97021 Hordeum vulgare gene encoding cysteine endopeptidase EP-A Length = 2752 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 228 catcctgatgtaacccttctcgccccactgggcgccccacgagttcctcacgat 281 ||||||||||||||||||||| ||||| | | |||||||||||| ||||||| Sbjct: 2397 catcctgatgtaacccttctcaccccagtcctctccccacgagttcttcacgat 2344
>gb|U94591.1|HVU94591 Hordeum vulgare cysteine proteinase precursor, mRNA, complete cds Length = 1328 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 228 catcctgatgtaacccttctcgccccactgggcgccccacgagttcctcacgat 281 ||||||||||||||||||||| ||||| | | |||||||||||| ||||||| Sbjct: 1028 catcctgatgtaacccttctcaccccagtcctctccccacgagttcttcacgat 975
>gb|AY974330.1| Saprolegnia parasitica SPM9F1 cysteine protease mRNA, complete cds Length = 1633 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 233 tgatgtaacccttctcgccccactgggcgccccacgagttc 273 ||||||| ||||| |||||||| | |||||||||||||||| Sbjct: 934 tgatgtagcccttgtcgccccagtcggcgccccacgagttc 894 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 454 gcctgctcgtcattggccggcacatc 479 ||||||||||| |||||||||||||| Sbjct: 719 gcctgctcgtcgttggccggcacatc 694
>ref|XM_536212.2| PREDICTED: Canis familiaris similar to Cathepsin H precursor (LOC479065), mRNA Length = 1206 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 249 gccccactgggcgccccacgagttcctcacgat 281 ||||||||||| ||||||||||||| ||||||| Sbjct: 831 gccccactgggggccccacgagttcttcacgat 799
>gb|U19384.1|HVU19384 Hordeum vulgare cysteine proteinase EPB2 gene, complete cds Length = 2714 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 405 ggcctcgatggccacggacacgggctggt 433 |||||||| |||||||||||||||||||| Sbjct: 1666 ggcctcgacggccacggacacgggctggt 1638 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 312 cccgtacccgaccgccgccacgccgtg 338 ||||||||||||| ||||||||||||| Sbjct: 1759 cccgtacccgaccaccgccacgccgtg 1733
>gb|U19359.1|HVU19359 Hordeum vulgare cysteine proteinase EPB1 gene, complete cds Length = 2880 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 405 ggcctcgatggccacggacacgggctggt 433 |||||||| |||||||||||||||||||| Sbjct: 1861 ggcctcgacggccacggacacgggctggt 1833 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 312 cccgtacccgaccgccgccacgccgtg 338 ||||||||||||| ||||||||||||| Sbjct: 1954 cccgtacccgaccaccgccacgccgtg 1928
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 458 gctcgtcattggccggcacatcctcgtagccgctgat 494 ||||||| ||||||||||| ||||||||||| ||||| Sbjct: 10053929 gctcgtcgttggccggcacgtcctcgtagcccctgat 10053893
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 458 gctcgtcattggccggcacatcctcgtagccgctgat 494 ||||||| ||||||||||| ||||||||||| ||||| Sbjct: 10053814 gctcgtcgttggccggcacgtcctcgtagcccctgat 10053778
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145890 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 458 gctcgtcattggccggcacatcctcgtagccgctgat 494 ||||||| ||||||||||| ||||||||||| ||||| Sbjct: 108692 gctcgtcgttggccggcacgtcctcgtagcccctgat 108728
>emb|AL732642.4|CNS08C9H Oryza sativa chromosome 12, . BAC OSJNBb0071E08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132906 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 458 gctcgtcattggccggcacatcctcgtagccgctgat 494 ||||||| ||||||||||| ||||||||||| ||||| Sbjct: 4145 gctcgtcgttggccggcacgtcctcgtagcccctgat 4181
>ref|XM_467463.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1101 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Minus Query: 261 gccccacgagttcctcacgatgatgtagtcgtggcc 296 ||||||||||||| ||| |||||||||||| ||||| Sbjct: 978 gccccacgagttcttcatgatgatgtagtcctggcc 943
>emb|BX066013.1|CNS09N3L Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC5AF02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 281 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Plus Query: 313 ccgtacccgaccgccgccacgccgtgatctagctgc 348 ||||||||||||||| |||||||||||| |||||| Sbjct: 190 ccgtacccgaccgccaacacgccgtgatcgagctgc 225
>emb|BX035610.1|CNS08ZN2 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA7AB08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 980 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Plus Query: 313 ccgtacccgaccgccgccacgccgtgatctagctgc 348 ||||||||||||||| |||||||||||| |||||| Sbjct: 558 ccgtacccgaccgccagcacgccgtgatcgagctgc 593
>emb|BX031213.1|CNS08W8X Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA46CC08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 839 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Plus Query: 313 ccgtacccgaccgccgccacgccgtgatctagctgc 348 ||||||||||||||| |||||||||||| |||||| Sbjct: 507 ccgtacccgaccgccagcacgccgtgatcgagctgc 542
>emb|BX030429.1|CNS08VN5 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA45BF11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 961 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Plus Query: 313 ccgtacccgaccgccgccacgccgtgatctagctgc 348 ||||||||||||||| |||||||||||| |||||| Sbjct: 532 ccgtacccgaccgccagcacgccgtgatcgagctgc 567
>emb|BX026447.1|CNS08SKJ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA4CH09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 497 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Plus Query: 313 ccgtacccgaccgccgccacgccgtgatctagctgc 348 ||||||||||||||| |||||||||||| |||||| Sbjct: 65 ccgtacccgaccgccagcacgccgtgatcgagctgc 100
>emb|BX021934.1|CNS08P36 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA32CC05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 362 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Plus Query: 313 ccgtacccgaccgccgccacgccgtgatctagctgc 348 ||||||||||||||| |||||||||||| |||||| Sbjct: 144 ccgtacccgaccgccagcacgccgtgatcgagctgc 179
>emb|BX017985.1|CNS08M1H Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA27AG02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 994 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Plus Query: 313 ccgtacccgaccgccgccacgccgtgatctagctgc 348 ||||||||||||||| |||||||||||| |||||| Sbjct: 549 ccgtacccgaccgccagcacgccgtgatcgagctgc 584
>emb|BX018704.1|CNS08MLG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA28BF05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 796 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Plus Query: 313 ccgtacccgaccgccgccacgccgtgatctagctgc 348 ||||||||||||||| |||||||||||| |||||| Sbjct: 498 ccgtacccgaccgccagcacgccgtgatcgagctgc 533
>emb|BX009597.1|CNS08FKH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA15CB03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 760 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Plus Query: 313 ccgtacccgaccgccgccacgccgtgatctagctgc 348 ||||||||||||||| |||||||||||| |||||| Sbjct: 533 ccgtacccgaccgccagcacgccgtgatcgagctgc 568
>emb|BX009596.1|CNS08FKG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA15CB03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 699 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Minus Query: 313 ccgtacccgaccgccgccacgccgtgatctagctgc 348 ||||||||||||||| |||||||||||| |||||| Sbjct: 290 ccgtacccgaccgccagcacgccgtgatcgagctgc 255
>emb|BX008183.1|CNS08EH7 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA13CB08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 954 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Plus Query: 313 ccgtacccgaccgccgccacgccgtgatctagctgc 348 ||||||||||||||| |||||||||||| |||||| Sbjct: 561 ccgtacccgaccgccagcacgccgtgatcgagctgc 596
>emb|BX007759.1|CNS08E5F Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA12DF06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 991 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Minus Query: 313 ccgtacccgaccgccgccacgccgtgatctagctgc 348 ||||||||||||||| |||||||||||| |||||| Sbjct: 858 ccgtacccgaccgccagcacgccgtgatcgagctgc 823
>emb|X62163.1|LMLCPA L.mexicana LCPa mRNA for cysteine proteinase Length = 2355 Score = 48.1 bits (24), Expect = 0.035 Identities = 42/48 (87%) Strand = Plus / Minus Query: 234 gatgtaacccttctcgccccactgggcgccccacgagttcctcacgat 281 |||||| |||||||| |||||| || ||||||||||||| ||||||| Sbjct: 2190 gatgtaccccttctcaccccacgaggagccccacgagttcttcacgat 2143
>emb|AJ420285.1|LIN420285 Leishmania infantum cpa gene for cysteine proteinase Length = 1665 Score = 48.1 bits (24), Expect = 0.035 Identities = 42/48 (87%) Strand = Plus / Minus Query: 234 gatgtaacccttctcgccccactgggcgccccacgagttcctcacgat 281 |||||| |||||||| |||||| || ||||||||||||| ||||||| Sbjct: 1053 gatgtaccccttctcaccccacgaggagccccacgagttcttcacgat 1006
>gb|AF309687.1|AF309687 Leishmania donovani cysteine protease gene, complete cds Length = 1062 Score = 48.1 bits (24), Expect = 0.035 Identities = 42/48 (87%) Strand = Plus / Minus Query: 234 gatgtaacccttctcgccccactgggcgccccacgagttcctcacgat 281 |||||| |||||||| |||||| || ||||||||||||| ||||||| Sbjct: 960 gatgtaccccttctcaccccacgaggagccccacgagttcttcacgat 913
>gb|AF538038.1| Leishmania mexicana amazonensis cysteine proteinase (cys1) gene, complete cds Length = 1065 Score = 48.1 bits (24), Expect = 0.035 Identities = 42/48 (87%) Strand = Plus / Minus Query: 234 gatgtaacccttctcgccccactgggcgccccacgagttcctcacgat 281 |||||| |||||||| |||||| || ||||||||||||| ||||||| Sbjct: 963 gatgtaccccttctcaccccacgaggagccccacgagttcttcacgat 916
>gb|AY141759.1| Leishmania mexicana amazonensis clone 2A1 cysteine proteinase mRNA, complete cds Length = 1568 Score = 48.1 bits (24), Expect = 0.035 Identities = 42/48 (87%) Strand = Plus / Minus Query: 234 gatgtaacccttctcgccccactgggcgccccacgagttcctcacgat 281 |||||| |||||||| |||||| || ||||||||||||| ||||||| Sbjct: 1011 gatgtaccccttctcaccccacgaggagccccacgagttcttcacgat 964
>gb|AY141758.1| Leishmania mexicana amazonensis clone 3A4 cysteine proteinase mRNA, complete cds Length = 2431 Score = 48.1 bits (24), Expect = 0.035 Identities = 42/48 (87%) Strand = Plus / Minus Query: 234 gatgtaacccttctcgccccactgggcgccccacgagttcctcacgat 281 |||||| |||||||| |||||| || ||||||||||||| ||||||| Sbjct: 1129 gatgtaccccttctcaccccacgaggagccccacgagttcttcacgat 1082
>gb|AY028171.1| Leishmania donovani extra chromosome XC290, partial sequence Length = 44273 Score = 48.1 bits (24), Expect = 0.035 Identities = 42/48 (87%) Strand = Plus / Minus Query: 234 gatgtaacccttctcgccccactgggcgccccacgagttcctcacgat 281 |||||| |||||||| |||||| || ||||||||||||| ||||||| Sbjct: 27783 gatgtaccccttctcaccccacgaggagccccacgagttcttcacgat 27736
>gb|AF004593.2|AF004593 Leishmania donovani chagasi promastigote-specific cysteine protease (ldccys2) gene, complete cds Length = 2684 Score = 48.1 bits (24), Expect = 0.035 Identities = 42/48 (87%) Strand = Plus / Minus Query: 234 gatgtaacccttctcgccccactgggcgccccacgagttcctcacgat 281 |||||| |||||||| |||||| || ||||||||||||| ||||||| Sbjct: 1318 gatgtaccccttctcaccccacgaggagccccacgagttcttcacgat 1271
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Minus Query: 261 gccccacgagttcctcacgatgatgtagtcgtggcc 296 ||||||||||||| ||| |||||||||||| ||||| Sbjct: 29687792 gccccacgagttcttcatgatgatgtagtcctggcc 29687757
>dbj|AP004047.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1191_G08 Length = 172832 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Minus Query: 261 gccccacgagttcctcacgatgatgtagtcgtggcc 296 ||||||||||||| ||| |||||||||||| ||||| Sbjct: 56771 gccccacgagttcttcatgatgatgtagtcctggcc 56736
>ref|XM_320687.2| Anopheles gambiae str. PEST ENSANGP00000020002 (ENSANGG00000017513), partial mRNA Length = 1558 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Minus Query: 313 ccgtacccgaccgccgccacgccgtgatctagctgc 348 ||||||||||||||| |||||||||||| |||||| Sbjct: 995 ccgtacccgaccgccagcacgccgtgatcgagctgc 960
>dbj|AK104296.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-H03, full insert sequence Length = 1251 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Minus Query: 261 gccccacgagttcctcacgatgatgtagtcgtggcc 296 ||||||||||||| ||| |||||||||||| ||||| Sbjct: 978 gccccacgagttcttcatgatgatgtagtcctggcc 943
>dbj|AK060534.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-A12, full insert sequence Length = 1251 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Minus Query: 261 gccccacgagttcctcacgatgatgtagtcgtggcc 296 ||||||||||||| ||| |||||||||||| ||||| Sbjct: 978 gccccacgagttcttcatgatgatgtagtcctggcc 943
>gb|L29168.1|LEICYSTPRO Leishmania pifanoi cysteine proteinase gene, complete cds Length = 1377 Score = 48.1 bits (24), Expect = 0.035 Identities = 42/48 (87%) Strand = Plus / Minus Query: 234 gatgtaacccttctcgccccactgggcgccccacgagttcctcacgat 281 |||||| |||||||| |||||| || ||||||||||||| ||||||| Sbjct: 1163 gatgtaccccttctcaccccacgaggagccccacgagttcttcacgat 1116
>gb|BC019136.1| Mus musculus cathepsin W, mRNA (cDNA clone IMAGE:5040853), containing frame-shift errors Length = 1521 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Minus Query: 231 cctgatgtaacccttctcgccccactgggcgccccacgagttc 273 ||||| |||||||||||||||||| || || ||||| |||||| Sbjct: 1110 cctgaagtaacccttctcgccccagtgagctccccaggagttc 1068
>emb|BX067338.1|CNS09O4E Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC51AA02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 993 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 313 ccgtacccgaccgccgccacgccgtgatctagctg 347 ||||||||||||||| |||||||||||| ||||| Sbjct: 541 ccgtacccgaccgccagcacgccgtgatcgagctg 575
>ref|NM_137061.2| Drosophila melanogaster CG6337-RA (CG6337), mRNA Length = 1115 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 229 atcctgatgtaacccttctcgccccac 255 |||||||||||||||| |||||||||| Sbjct: 988 atcctgatgtaaccctcctcgccccac 962
>gb|AY084123.1| Drosophila melanogaster RE20049 full insert cDNA Length = 1131 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 229 atcctgatgtaacccttctcgccccac 255 |||||||||||||||| |||||||||| Sbjct: 988 atcctgatgtaaccctcctcgccccac 962
>gb|AC108071.2| Homo sapiens BAC clone RP11-688P1 from 4, complete sequence Length = 64873 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 gtaacccttctcgccccactggg 259 ||||||||||||||||||||||| Sbjct: 46626 gtaacccttctcgccccactggg 46648
>dbj|AK163626.1| Mus musculus 4 days neonate thymus cDNA, RIKEN full-length enriched library, clone:B630006D19 product:cathepsin W, full insert sequence Length = 1565 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Minus Query: 231 cctgatgtaacccttctcgccccactgggcgccccacgagttc 273 ||||| |||||||||||||||||| || || ||||| |||||| Sbjct: 1365 cctgaagtaacccttctcgccccagtgagctccccaggagttc 1323
>gb|AC099008.1| Drosophila melanogaster, chromosome 2R, region 50B-50C, BAC clone BACR16G12, complete sequence Length = 154681 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 229 atcctgatgtaacccttctcgccccac 255 |||||||||||||||| |||||||||| Sbjct: 113606 atcctgatgtaaccctcctcgccccac 113580
>dbj|AK088375.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430014D23 product:cathepsin W, full insert sequence Length = 1231 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Minus Query: 231 cctgatgtaacccttctcgccccactgggcgccccacgagttc 273 ||||| |||||||||||||||||| || || ||||| |||||| Sbjct: 1033 cctgaagtaacccttctcgccccagtgagctccccaggagttc 991
>gb|AF014941.1|AF014941 Mus musculus lymphopain mRNA, complete cds Length = 1116 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Minus Query: 231 cctgatgtaacccttctcgccccactgggcgccccacgagttc 273 ||||| |||||||||||||||||| || || ||||| |||||| Sbjct: 1017 cctgaagtaacccttctcgccccagtgagctccccaggagttc 975
>gb|AY110563.1| Zea mays CL897_1 mRNA sequence Length = 794 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 405 ggcctcgatggccacggacacgggctg 431 ||||||||||| ||||||||||||||| Sbjct: 393 ggcctcgatggacacggacacgggctg 367
>gb|AY109416.1| Zea mays CL694_1 mRNA sequence Length = 3272 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 411 gatggccacggacacgggctggt 433 ||||||||||||||||||||||| Sbjct: 2846 gatggccacggacacgggctggt 2868
>gb|AE003817.3| Drosophila melanogaster chromosome 2R, section 33 of 73 of the complete sequence Length = 265472 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 229 atcctgatgtaacccttctcgccccac 255 |||||||||||||||| |||||||||| Sbjct: 240615 atcctgatgtaaccctcctcgccccac 240641
>gb|AC005643.1|AC005643 Drosophila melanogaster, chromosome 2R, region 50C5-50C8, P1 clone DS02972, complete sequence Length = 80389 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 229 atcctgatgtaacccttctcgccccac 255 |||||||||||||||| |||||||||| Sbjct: 4250 atcctgatgtaaccctcctcgccccac 4224
>gb|BC093401.1| Rattus norvegicus cathepsin W, mRNA (cDNA clone MGC:112764 IMAGE:7389584), complete cds Length = 1272 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Minus Query: 231 cctgatgtaacccttctcgccccactgggcgccccacgagttc 273 ||||| |||||||||||||||||||| || ||||| |||||| Sbjct: 1022 cctgaagtaacccttctcgccccactcagctccccaggagttc 980
>ref|NM_001024242.1| Rattus norvegicus cathepsin W (Ctsw), mRNA Length = 1272 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Minus Query: 231 cctgatgtaacccttctcgccccactgggcgccccacgagttc 273 ||||| |||||||||||||||||||| || ||||| |||||| Sbjct: 1022 cctgaagtaacccttctcgccccactcagctccccaggagttc 980
>ref|NM_009985.2| Mus musculus cathepsin W (Ctsw), mRNA Length = 1231 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Minus Query: 231 cctgatgtaacccttctcgccccactgggcgccccacgagttc 273 ||||| |||||||||||||||||| || || ||||| |||||| Sbjct: 1033 cctgaagtaacccttctcgccccagtgagctccccaggagttc 991
>gb|AY432200.1| Aedes aegypti ASAP ID: 43331 cathepsin F mRNA sequence Length = 692 Score = 44.1 bits (22), Expect = 0.54 Identities = 37/42 (88%) Strand = Plus / Minus Query: 237 gtaacccttctcgccccactgggcgccccacgagttcctcac 278 |||||||| ||||||||||| || |||||||||||| |||| Sbjct: 617 gtaaccctgctcgccccacttgggaccccacgagttcttcac 576
>gb|BC053088.1| Mus musculus RIKEN cDNA 2310067B10 gene, mRNA (cDNA clone MGC:62470 IMAGE:5709104), complete cds Length = 4928 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 208 ccgttgctggtgcccctcttca 229 |||||||||||||||||||||| Sbjct: 3059 ccgttgctggtgcccctcttca 3080
>gb|BC007157.1| Mus musculus RIKEN cDNA 2310067B10 gene, mRNA (cDNA clone IMAGE:3487340), partial cds Length = 3250 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 208 ccgttgctggtgcccctcttca 229 |||||||||||||||||||||| Sbjct: 1390 ccgttgctggtgcccctcttca 1411
>gb|BC115845.1| Mus musculus secretory blood group 1, mRNA (cDNA clone IMAGE:40044957), partial cds Length = 925 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 208 ccgttgctggtgcccctcttca 229 |||||||||||||||||||||| Sbjct: 744 ccgttgctggtgcccctcttca 765
>gb|BC030865.1| Mus musculus RIKEN cDNA 2310067B10 gene, mRNA (cDNA clone IMAGE:4215557), partial cds Length = 2788 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 208 ccgttgctggtgcccctcttca 229 |||||||||||||||||||||| Sbjct: 911 ccgttgctggtgcccctcttca 932
>emb|AJ130942.1|LMA130942 Leishmania major (MRHO/IR/75/ER), amastigote cpa gene encoding cysteine proteinase A Length = 697 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Minus Query: 236 tgtaacccttctcgccccactgggcgccccacgagttcctcacgat 281 |||| |||||||| |||||| || ||||||||||||| ||||||| Sbjct: 587 tgtaccccttctcaccccacgaggtgccccacgagttcttcacgat 542
>dbj|AK155233.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630210E08 product:Hypothetical membrane all-alpha structure containing protein (Fragment) homolog [Mus musculus], full insert sequence Length = 3135 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 208 ccgttgctggtgcccctcttca 229 |||||||||||||||||||||| Sbjct: 3019 ccgttgctggtgcccctcttca 3040
>dbj|AK047622.1| Mus musculus adult male corpus striatum cDNA, RIKEN full-length enriched library, clone:C030003A12 product:hypothetical Membrane all-alpha structure containing protein, full insert sequence Length = 3462 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 208 ccgttgctggtgcccctcttca 229 |||||||||||||||||||||| Sbjct: 1278 ccgttgctggtgcccctcttca 1299
>gb|AY109437.1| Zea mays CL903_-1 mRNA sequence Length = 1664 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 313 ccgtacccgaccgccgccacgccgtg 338 ||||| |||||||||||||||||||| Sbjct: 1002 ccgtagccgaccgccgccacgccgtg 977
>dbj|AK122217.1| Mus musculus mRNA for mKIAA0195 protein Length = 5678 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 208 ccgttgctggtgcccctcttca 229 |||||||||||||||||||||| Sbjct: 3386 ccgttgctggtgcccctcttca 3407
>ref|NM_028014.2| Mus musculus RIKEN cDNA 2310067B10 gene (2310067B10Rik), mRNA Length = 4928 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 208 ccgttgctggtgcccctcttca 229 |||||||||||||||||||||| Sbjct: 3059 ccgttgctggtgcccctcttca 3080
>emb|AL645852.23| Mouse DNA sequence from clone RP23-354K2 on chromosome 11, complete sequence Length = 158089 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 208 ccgttgctggtgcccctcttca 229 |||||||||||||||||||||| Sbjct: 113291 ccgttgctggtgcccctcttca 113312
>ref|NM_119701.2| Arabidopsis thaliana XCP1 (XYLEM CYSTEINE PEPTIDASE 1); cysteine-type endopeptidase/ cysteine-type peptidase AT4G35350 (XCP1) transcript variant AT4G35350.1 mRNA, complete cds Length = 1244 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 162 cttggttgggtaggaggccatcttgttgatgccgcagaggccctc 206 |||||| || || ||||||||||||||||| || ||||| ||||| Sbjct: 1106 cttggtaggatatgaggccatcttgttgattccacagagtccctc 1062
>ref|NM_202958.1| Arabidopsis thaliana XCP1 (XYLEM CYSTEINE PEPTIDASE 1); cysteine-type endopeptidase/ cysteine-type peptidase AT4G35350 (XCP1) transcript variant AT4G35350.2 mRNA, complete cds Length = 1340 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 162 cttggttgggtaggaggccatcttgttgatgccgcagaggccctc 206 |||||| || || ||||||||||||||||| || ||||| ||||| Sbjct: 1202 cttggtaggatatgaggccatcttgttgattccacagagtccctc 1158
>ref|XM_474131.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1377 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 gccccacgagttcctcacgat 281 ||||||||||||||||||||| Sbjct: 936 gccccacgagttcctcacgat 916
>gb|AC005220.1| Homo sapiens chromosome 20, BAC clone 99 (LBNL H80), complete sequence Length = 163196 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 53 aaagaaaaagcagggaaatgcaaag 77 |||||||||| |||||||||||||| Sbjct: 65260 aaagaaaaaggagggaaatgcaaag 65236
>gb|AY662988.1| Petunia x hybrida cysteine proteinase (CP2) mRNA, partial cds Length = 872 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 231 cctgatgtaacccttctcgccccactgggcgccccacgagttcct 275 ||||| |||||||||||| ||||| ||||||||||||||||| Sbjct: 114 cctgaggtaacccttctctccccaggaagcgccccacgagttcct 70
>emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 83 Length = 197859 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 162 cttggttgggtaggaggccatcttgttgatgccgcagaggccctc 206 |||||| || || ||||||||||||||||| || ||||| ||||| Sbjct: 76482 cttggtaggatatgaggccatcttgttgattccacagagtccctc 76438
>emb|AL022604.1|ATF23E12 Arabidopsis thaliana DNA chromosome 4, BAC clone F23E12 (ESSA project) Length = 86710 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 162 cttggttgggtaggaggccatcttgttgatgccgcagaggccctc 206 |||||| || || ||||||||||||||||| || ||||| ||||| Sbjct: 26869 cttggtaggatatgaggccatcttgttgattccacagagtccctc 26913
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 415 gccacggacacgggctggtgggcga 439 ||||||||||| ||||||||||||| Sbjct: 22432812 gccacggacacaggctggtgggcga 22432788
>emb|BX828945.1|CNS0A2LF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL53ZB08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1195 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 162 cttggttgggtaggaggccatcttgttgatgccgcagaggccctc 206 |||||| || || ||||||||||||||||| || ||||| ||||| Sbjct: 1094 cttggtaggatatgaggccatcttgttgattccacagagtccctc 1050
>gb|BT005179.1| Arabidopsis thaliana clone U50467 unknown protein (At4g35350) mRNA, complete cds Length = 1099 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 162 cttggttgggtaggaggccatcttgttgatgccgcagaggccctc 206 |||||| || || ||||||||||||||||| || ||||| ||||| Sbjct: 1059 cttggtaggatatgaggccatcttgttgattccacagagtccctc 1015
>emb|BX323843.9| Zebrafish DNA sequence from clone CH211-10A23 in linkage group 19, complete sequence Length = 128245 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 364 tcgaaaactcccccgctgtag 384 ||||||||||||||||||||| Sbjct: 72662 tcgaaaactcccccgctgtag 72682
>gb|AF191027.1|AF191027 Arabidopsis thaliana papain-type cysteine endopeptidase XCP1 mRNA, complete cds Length = 1214 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 162 cttggttgggtaggaggccatcttgttgatgccgcagaggccctc 206 |||||| || || ||||||||||||||||| || ||||| ||||| Sbjct: 1059 cttggtaggatatgaggccatcttgttgattccacagagtccctc 1015
>dbj|AP003724.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0498C03 Length = 146394 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 415 gccacggacacgggctggtgggcga 439 ||||||||||| ||||||||||||| Sbjct: 69945 gccacggacacaggctggtgggcga 69921
>dbj|AK117394.1| Arabidopsis thaliana At4g35350 mRNA for putative cysteine proteinase, complete cds, clone: RAFL16-98-B02 Length = 1244 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 162 cttggttgggtaggaggccatcttgttgatgccgcagaggccctc 206 |||||| || || ||||||||||||||||| || ||||| ||||| Sbjct: 1106 cttggtaggatatgaggccatcttgttgattccacagagtccctc 1062
>dbj|AK109160.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-G07, full insert sequence Length = 1304 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 309 cgacccgtacccgaccgccgccacgccgtgatc 341 ||||||||| ||||| |||| |||||||||||| Sbjct: 958 cgacccgtagccgacggccgtcacgccgtgatc 926
>dbj|AK098910.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H09, full insert sequence Length = 1753 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 gccccacgagttcctcacgat 281 ||||||||||||||||||||| Sbjct: 1001 gccccacgagttcctcacgat 981
>dbj|AK071913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065M08, full insert sequence Length = 1774 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 gccccacgagttcctcacgat 281 ||||||||||||||||||||| Sbjct: 1001 gccccacgagttcctcacgat 981
>dbj|AK067453.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106H06, full insert sequence Length = 1365 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 415 gccacggacacgggctggtgggcga 439 ||||||||||| ||||||||||||| Sbjct: 965 gccacggacacaggctggtgggcga 941
>dbj|AK061729.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-B12, full insert sequence Length = 976 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 gccccacgagttcctcacgat 281 ||||||||||||||||||||| Sbjct: 203 gccccacgagttcctcacgat 183
>gb|AY110841.1| Zea mays CL908_1 mRNA sequence Length = 916 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 241 cccttctcgccccactgggcgccccacgagttc 273 |||||||||||||||| |||||||||||||| Sbjct: 640 cccttctcgccccacttctcgccccacgagttc 608
>emb|AL442007.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0212B02, complete sequence Length = 118971 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 gccccacgagttcctcacgat 281 ||||||||||||||||||||| Sbjct: 48487 gccccacgagttcctcacgat 48507
>dbj|D90406.1|RICOZA Oryza sativa (japonica cultivar-group) mRNA for oryzain alpha, complete cds Length = 1929 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 gccccacgagttcctcacgat 281 ||||||||||||||||||||| Sbjct: 981 gccccacgagttcctcacgat 961
>emb|BX908786.9| Zebrafish DNA sequence from clone CH211-13O8 in linkage group 3, complete sequence Length = 121030 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 364 tcgaaaactcccccgctgtag 384 ||||||||||||||||||||| Sbjct: 34531 tcgaaaactcccccgctgtag 34551
>emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0059K02, complete sequence Length = 165745 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 gccccacgagttcctcacgat 281 ||||||||||||||||||||| Sbjct: 40744 gccccacgagttcctcacgat 40764
>gb|M95060.1|MZEORFA Zea mays putative thiol protease homolog mRNA, partial cds Length = 171 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 241 cccttctcgccccactgggcgccccacgagttc 273 |||||||||||||||| |||||||||||||| Sbjct: 115 cccttctcgccccacttctcgccccacgagttc 83
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 cggaggcctcgatggccacg 420 |||||||||||||||||||| Sbjct: 1080820 cggaggcctcgatggccacg 1080801
>ref|XM_419652.1| PREDICTED: Gallus gallus similar to metabotropic glutamate receptor (LOC421614), mRNA Length = 2796 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 418 acggacacgggctggtgggcgaga 441 |||||||| ||||||||||||||| Sbjct: 2716 acggacactggctggtgggcgaga 2693
>ref|XM_585928.2| PREDICTED: Bos taurus similar to Scaffold attachment factor B2 (LOC509045), mRNA Length = 2431 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 gtgcctgccggaggcctcga 412 |||||||||||||||||||| Sbjct: 2095 gtgcctgccggaggcctcga 2114
>gb|AY251055.1| Anthurium andraeanum senescence-associated cysteine protease mRNA, complete cds Length = 1703 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccccacgagttcctcacgat 281 |||||||||||||||||||| Sbjct: 1003 ccccacgagttcctcacgat 984
>gb|DQ000609.1| Globodera pallida cathepsin L-like cysteine proteinase (cpl-1) gene, complete cds Length = 5203 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 239 aacccttctcgccccactgggcgcccca 266 |||||| ||||||||| ||||||||||| Sbjct: 4877 aaccctgctcgccccagtgggcgcccca 4850
>gb|AY491402.1| Capsicum annuum cysteine protease mRNA, partial sequence Length = 662 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 gcgccccacgagttcctcac 278 |||||||||||||||||||| Sbjct: 218 gcgccccacgagttcctcac 199
>emb|BX908755.10| Zebrafish DNA sequence from clone DKEY-67F11 in linkage group 3, complete sequence Length = 160005 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 cgaaaactcccccgctgtag 384 |||||||||||||||||||| Sbjct: 71502 cgaaaactcccccgctgtag 71483
>gb|AC079597.13| Homo sapiens 12q BAC RP11-324H9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 156766 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 catcagttgtccttggttgg 170 |||||||||||||||||||| Sbjct: 40212 catcagttgtccttggttgg 40193
>emb|BX022234.1|CNS08PBI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA34AC05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 656 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 313 ccgtacccgaccgccgccacgccgtgat 340 ||||||||||||||| ||||||||||| Sbjct: 575 ccgtacccgaccgccagcacgccgtgat 602
>emb|Y14573.1|HVCH4H Hordeum vulgare DNA for chromosome 4H Length = 59748 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 aggccatcttgttgatgccg 195 |||||||||||||||||||| Sbjct: 55959 aggccatcttgttgatgccg 55978
>emb|Y09534.1|RLSPRLVCP R.leguminosarum Symbiosis Plasmid DNA, rlvCP gene Length = 3696 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 gcgcgccgcatggaccgtcg 366 |||||||||||||||||||| Sbjct: 3233 gcgcgccgcatggaccgtcg 3252
>gb|AY148100.1| Homo sapiens colony stimulating factor 3 receptor (granulocyte) (CSF3R) gene, complete cds Length = 18843 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 tcctctggatggatgcagca 137 |||||||||||||||||||| Sbjct: 3413 tcctctggatggatgcagca 3394
>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13 Length = 349306 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 cggaggcctcgatggccacg 420 |||||||||||||||||||| Sbjct: 47020 cggaggcctcgatggccacg 47001
>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14 Length = 327650 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 cggaggcctcgatggccacg 420 |||||||||||||||||||| Sbjct: 94246 cggaggcctcgatggccacg 94227
>gb|AC119675.2| Homo sapiens chromosome 1 clone RP4-731G4, complete sequence Length = 138939 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 tcctctggatggatgcagca 137 |||||||||||||||||||| Sbjct: 114816 tcctctggatggatgcagca 114835
>gb|AC115111.2| Homo sapiens BAC clone RP11-286J9 from 4, complete sequence Length = 113684 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 53 aaagaaaaagcagggaaatgcaaa 76 |||||||| ||||||||||||||| Sbjct: 63917 aaagaaaatgcagggaaatgcaaa 63894
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 501 cgcctccgactcggccttct 520 |||||||||||||||||||| Sbjct: 4452823 cgcctccgactcggccttct 4452842
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 cggaggcctcgatggccacg 420 |||||||||||||||||||| Sbjct: 440203 cggaggcctcgatggccacg 440222
>dbj|AB109188.1| Helianthus annuus scp3 mRNA for cysteine protease-3, complete cds Length = 1286 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccccacgagttcctcacgat 281 |||||||||||||||||||| Sbjct: 950 ccccacgagttcctcacgat 931
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ccgaccgccgccacgccgtg 338 |||||||||||||||||||| Sbjct: 255037 ccgaccgccgccacgccgtg 255018
>emb|AL928726.5| Mouse DNA sequence from clone RP23-397A11 on chromosome 2, complete sequence Length = 120515 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 catcctgatgtaacccttct 247 |||||||||||||||||||| Sbjct: 9231 catcctgatgtaacccttct 9212
>gb|L38514.1|TRBRANGB Trypanosoma rangeli (clone 3) rangelipain gene, 3' end of cds and 5' end of cds Length = 1898 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Minus Query: 234 gatgtaacccttctcgccccactgggcgccccacgagttc 273 ||||||||||| ||| ||||| | ||||||||||||||| Sbjct: 165 gatgtaaccctcctcaccccagtccgcgccccacgagttc 126
>gb|L38513.1|TRBRANGA Trypanosoma rangeli (clone 2) rangelipain gene, 3' end of cds and 5' end of cds Length = 1905 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Minus Query: 234 gatgtaacccttctcgccccactgggcgccccacgagttc 273 ||||||||||| ||| ||||| | ||||||||||||||| Sbjct: 165 gatgtaaccctcctcaccccagtccgcgccccacgagttc 126
>gb|L38512.1|TRBRANG Trypanosoma rangeli (clone 1) rangelipain gene, 3' end of cds and 5' end of cds Length = 1902 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Minus Query: 234 gatgtaacccttctcgccccactgggcgccccacgagttc 273 ||||||||||| ||| ||||| | ||||||||||||||| Sbjct: 165 gatgtaaccctcctcaccccagtccgcgccccacgagttc 126 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,270,855 Number of Sequences: 3902068 Number of extensions: 4270855 Number of successful extensions: 148432 Number of sequences better than 10.0: 146 Number of HSP's better than 10.0 without gapping: 142 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 147512 Number of HSP's gapped (non-prelim): 907 length of query: 618 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 595 effective length of database: 17,143,297,704 effective search space: 10200262133880 effective search space used: 10200262133880 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)