ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd27g02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_190942.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1272 Score = 107 bits (54), Expect = 5e-20 Identities = 180/222 (81%) Strand = Plus / Minus Query: 460 tggcggcaaactgggcaggagttgtgctgaaccaaccaggggatgatgcagttggcatgg 519 |||||||||||||| || || ||||||||||||| |||||| |||||||| | |||||| Sbjct: 983 tggcggcaaactggacaagaattgtgctgaaccagccagggaatgatgcattcagcatgg 924 Query: 520 tacaggtgcttgcacggcatctccctcgcctccgagccgacttcgaatctctccgtgcag 579 ||||| |||||||| |||||||||| ||||| | || || || ||| | || ||||| Sbjct: 923 tacagatgcttgcatggcatctcccgtgcctctgttccaacctcaaatttgtctgtgcaa 864 Query: 580 actgggcaaactggatcatcgctcagatgcctgcgggttatcctcaccaccggcatggag 639 ||||| || |||||||| || || |||||| || ||||| | ||||| ||||||||| Sbjct: 863 actggacagtgaggatcatctctaaggtgcctgaggtttatctttaccacaggcatggag 804 Query: 640 tcgatcgcggactgcggagccggcgctggtccttgacggtta 681 || || || ||||| ||||| || | |||||||||||||||| Sbjct: 803 tcaattgcagactgtggagctggtggtggtccttgacggtta 762
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 107 bits (54), Expect = 5e-20 Identities = 180/222 (81%) Strand = Plus / Minus Query: 460 tggcggcaaactgggcaggagttgtgctgaaccaaccaggggatgatgcagttggcatgg 519 |||||||||||||| || || ||||||||||||| |||||| |||||||| | |||||| Sbjct: 33963513 tggcggcaaactggacaagaattgtgctgaaccagccagggaatgatgcattcagcatgg 33963454 Query: 520 tacaggtgcttgcacggcatctccctcgcctccgagccgacttcgaatctctccgtgcag 579 ||||| |||||||| |||||||||| ||||| | || || || ||| | || ||||| Sbjct: 33963453 tacagatgcttgcatggcatctcccgtgcctctgttccaacctcaaatttgtctgtgcaa 33963394 Query: 580 actgggcaaactggatcatcgctcagatgcctgcgggttatcctcaccaccggcatggag 639 ||||| || |||||||| || || |||||| || ||||| | ||||| ||||||||| Sbjct: 33963393 actggacagtgaggatcatctctaaggtgcctgaggtttatctttaccacaggcatggag 33963334 Query: 640 tcgatcgcggactgcggagccggcgctggtccttgacggtta 681 || || || ||||| ||||| || | |||||||||||||||| Sbjct: 33963333 tcaattgcagactgtggagctggtggtggtccttgacggtta 33963292 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 517 tggtacaggtgcttgcacggcatct 541 ||||| ||||||||||||||||||| Sbjct: 4924361 tggtataggtgcttgcacggcatct 4924337
>dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0003D09 Length = 161970 Score = 107 bits (54), Expect = 5e-20 Identities = 180/222 (81%) Strand = Plus / Minus Query: 460 tggcggcaaactgggcaggagttgtgctgaaccaaccaggggatgatgcagttggcatgg 519 |||||||||||||| || || ||||||||||||| |||||| |||||||| | |||||| Sbjct: 94956 tggcggcaaactggacaagaattgtgctgaaccagccagggaatgatgcattcagcatgg 94897 Query: 520 tacaggtgcttgcacggcatctccctcgcctccgagccgacttcgaatctctccgtgcag 579 ||||| |||||||| |||||||||| ||||| | || || || ||| | || ||||| Sbjct: 94896 tacagatgcttgcatggcatctcccgtgcctctgttccaacctcaaatttgtctgtgcaa 94837 Query: 580 actgggcaaactggatcatcgctcagatgcctgcgggttatcctcaccaccggcatggag 639 ||||| || |||||||| || || |||||| || ||||| | ||||| ||||||||| Sbjct: 94836 actggacagtgaggatcatctctaaggtgcctgaggtttatctttaccacaggcatggag 94777 Query: 640 tcgatcgcggactgcggagccggcgctggtccttgacggtta 681 || || || ||||| ||||| || | |||||||||||||||| Sbjct: 94776 tcaattgcagactgtggagctggtggtggtccttgacggtta 94735
>dbj|AK103314.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125G22, full insert sequence Length = 1509 Score = 107 bits (54), Expect = 5e-20 Identities = 180/222 (81%) Strand = Plus / Minus Query: 460 tggcggcaaactgggcaggagttgtgctgaaccaaccaggggatgatgcagttggcatgg 519 |||||||||||||| || || ||||||||||||| |||||| |||||||| | |||||| Sbjct: 959 tggcggcaaactggacaagaattgtgctgaaccagccagggaatgatgcattcagcatgg 900 Query: 520 tacaggtgcttgcacggcatctccctcgcctccgagccgacttcgaatctctccgtgcag 579 ||||| |||||||| |||||||||| ||||| | || || || ||| | || ||||| Sbjct: 899 tacagatgcttgcatggcatctcccgtgcctctgttccaacctcaaatttgtctgtgcaa 840 Query: 580 actgggcaaactggatcatcgctcagatgcctgcgggttatcctcaccaccggcatggag 639 ||||| || |||||||| || || |||||| || ||||| | ||||| ||||||||| Sbjct: 839 actggacagtgaggatcatctctaaggtgcctgaggtttatctttaccacaggcatggag 780 Query: 640 tcgatcgcggactgcggagccggcgctggtccttgacggtta 681 || || || ||||| ||||| || | |||||||||||||||| Sbjct: 779 tcaattgcagactgtggagctggtggtggtccttgacggtta 738
>gb|AY107323.1| Zea mays PCO119739 mRNA sequence Length = 712 Score = 105 bits (53), Expect = 2e-19 Identities = 77/85 (90%) Strand = Plus / Minus Query: 460 tggcggcaaactgggcaggagttgtgctgaaccaaccaggggatgatgcagttggcatgg 519 ||||||||||| ||||| || ||||||||||||| ||||||||||||||||| | |||| Sbjct: 120 tggcggcaaacagggcaagaattgtgctgaaccagccaggggatgatgcagtcagtatgg 61 Query: 520 tacaggtgcttgcacggcatctccc 544 |||||||||||||| |||||||||| Sbjct: 60 tacaggtgcttgcatggcatctccc 36
>gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1579_G03, complete sequence Length = 121466 Score = 91.7 bits (46), Expect = 3e-15 Identities = 91/106 (85%) Strand = Plus / Plus Query: 446 gcggcggcagcgagtggcggcaaactgggcaggagttgtgctgaaccaaccaggggatga 505 |||||||||||||||||||||| || || ||||||||||| || |||| ||| || | || Sbjct: 51149 gcggcggcagcgagtggcggcagacgggacaggagttgtgatggaccagccacggcacga 51208 Query: 506 tgcagttggcatggtacaggtgcttgcacggcatctccctcgcctc 551 |||||| ||| ||||||||||| |||||||||||||| |||||| Sbjct: 51209 tgcagtcggcgtggtacaggtgggcgcacggcatctcccgcgcctc 51254
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 91.7 bits (46), Expect = 3e-15 Identities = 91/106 (85%) Strand = Plus / Plus Query: 446 gcggcggcagcgagtggcggcaaactgggcaggagttgtgctgaaccaaccaggggatga 505 |||||||||||||||||||||| || || ||||||||||| || |||| ||| || | || Sbjct: 24164911 gcggcggcagcgagtggcggcagacgggacaggagttgtgatggaccagccacggcacga 24164970 Query: 506 tgcagttggcatggtacaggtgcttgcacggcatctccctcgcctc 551 |||||| ||| ||||||||||| |||||||||||||| |||||| Sbjct: 24164971 tgcagtcggcgtggtacaggtgggcgcacggcatctcccgcgcctc 24165016
>gb|AY108177.1| Zea mays PCO119740 mRNA sequence Length = 795 Score = 73.8 bits (37), Expect = 7e-10 Identities = 133/165 (80%) Strand = Plus / Minus Query: 516 atggtacaggtgcttgcacggcatctccctcgcctccgagccgacttcgaatctctccgt 575 |||||||||||||||||| |||||||||| ||||| | || || |||||| | || | Sbjct: 784 atggtacaggtgcttgcatggcatctcccgtgcctctgctccaacctcgaatttgtcttt 725 Query: 576 gcagactgggcaaactggatcatcgctcagatgcctgcgggttatcctcaccaccggcat 635 ||| |||| ||| |||||| ||| |||||||||||| ||||| | ||||| ||||| Sbjct: 724 gcaaactgcgcactgtggatcgtcgtcaagatgcctgcggtttatctttaccacaggcat 665 Query: 636 ggagtcgatcgcggactgcggagccggcgctggtccttgacggtt 680 |||||| || || ||||| ||||| || ||||| ||||||||||| Sbjct: 664 ggagtcaatagctgactgtggagcaggtgctgggccttgacggtt 620
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 525 gtgcttgcacggcatctccctcgcctc 551 ||||||||||||||||||||||||||| Sbjct: 11790895 gtgcttgcacggcatctccctcgcctc 11790869 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 504 gatgcagttggcatggtacaggtgcttgcacggcatct 541 |||||||| || ||||||| ||||||||||||||||| Sbjct: 29902586 gatgcagtcggagtggtacacgtgcttgcacggcatct 29902549 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 gtgcttgcacggcatctccc 544 |||||||||||||||||||| Sbjct: 9057447 gtgcttgcacggcatctccc 9057428
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 525 gtgcttgcacggcatctccctcgcctc 551 ||||||||||||||||||||||||||| Sbjct: 11787658 gtgcttgcacggcatctccctcgcctc 11787632 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 504 gatgcagttggcatggtacaggtgcttgcacggcatct 541 |||||||| || ||||||| ||||||||||||||||| Sbjct: 29994008 gatgcagtcggagtggtacacgtgcttgcacggcatct 29993971 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 gtgcttgcacggcatctccc 544 |||||||||||||||||||| Sbjct: 9055280 gtgcttgcacggcatctccc 9055261
>gb|AC137070.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0035J18, from chromsome 3, complete sequence Length = 162711 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 525 gtgcttgcacggcatctccctcgcctc 551 ||||||||||||||||||||||||||| Sbjct: 119758 gtgcttgcacggcatctccctcgcctc 119784
>dbj|AK068144.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135G08, full insert sequence Length = 1362 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 525 gtgcttgcacggcatctccctcgcctc 551 ||||||||||||||||||||||||||| Sbjct: 983 gtgcttgcacggcatctccctcgcctc 957
>gb|AC167243.3| Mus musculus BAC clone RP24-144E2 from chromosome 9, complete sequence Length = 193364 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Plus Query: 256 ctgggaccggggccggggccggggctc 282 ||||| ||||||||||||||||||||| Sbjct: 112134 ctggggccggggccggggccggggctc 112160
>gb|AC137848.31| Mus musculus chromosome 9, clone RP24-118I23, complete sequence Length = 190317 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 256 ctgggaccggggccggggccggggctc 282 ||||| ||||||||||||||||||||| Sbjct: 58378 ctggggccggggccggggccggggctc 58352
>gb|AC104241.7| Homo sapiens chromosome 11, clone RP11-45A12, complete sequence Length = 147821 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 258 gggaccggggccggggccggggc 280 ||||||||||||||||||||||| Sbjct: 52402 gggaccggggccggggccggggc 52380 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 52380 ccggggccggggccggggct 52361 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 256 ctgggaccggggccggggccggggctcg 283 ||||| ||||||||||||| |||||||| Sbjct: 52362 ctggggccggggccggggctggggctcg 52335
>ref|XM_543280.2| PREDICTED: Canis familiaris similar to solute carrier family 16 (monocarboxylic acid transporters), member 14 (LOC486154), mRNA Length = 1455 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 258 gggaccggggccggggccggggc 280 ||||||||||||||||||||||| Sbjct: 690 gggaccggggccggggccggggc 712
>gb|AC099668.2| Homo sapiens chromosome 3 clone RP11-901L6, complete sequence Length = 242222 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 258 gggaccggggccggggccggggc 280 ||||||||||||||||||||||| Sbjct: 181464 gggaccggggccggggccggggc 181486
>ref|NM_003458.2| Homo sapiens bassoon (presynaptic cytomatrix protein) (BSN), mRNA Length = 15966 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 258 gggaccggggccggggccggggc 280 ||||||||||||||||||||||| Sbjct: 321 gggaccggggccggggccggggc 299
>ref|NM_054085.1| Mus musculus alpha-kinase 3 (Alpk3), mRNA Length = 6373 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 255 actgggaccggggccggggccggggct 281 |||||||| |||||||||||||||||| Sbjct: 1292 actgggacaggggccggggccggggct 1266
>gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthetic gene cluster and flanking regions Length = 116831 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 258 gggaccggggccggggccggggc 280 ||||||||||||||||||||||| Sbjct: 27733 gggaccggggccggggccggggc 27711
>gb|AC104452.2| Homo sapiens chromosome 3 clone RP11-949J7, complete sequence Length = 186563 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 258 gggaccggggccggggccggggc 280 ||||||||||||||||||||||| Sbjct: 12649 gggaccggggccggggccggggc 12671
>gb|AF338872.1|AF338872 Mus musculus myocytic induction/differentiation originator mRNA, complete cds Length = 6373 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 255 actgggaccggggccggggccggggct 281 |||||||| |||||||||||||||||| Sbjct: 1292 actgggacaggggccggggccggggct 1266
>gb|AF052224.1|AF052224 Homo sapiens neuronal double zinc finger protein (ZNF231) mRNA, complete cds Length = 15964 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 258 gggaccggggccggggccggggc 280 ||||||||||||||||||||||| Sbjct: 322 gggaccggggccggggccggggc 300
>ref|XM_467971.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1023 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 504 gatgcagttggcatggtacaggtgcttgcacggcatct 541 |||||||| || ||||||| ||||||||||||||||| Sbjct: 678 gatgcagtcggagtggtacacgtgcttgcacggcatct 641
>gb|AC123751.6| Mus musculus chromosome 8, clone RP24-187F1, complete sequence Length = 159523 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 256 ctgggaccggggccggggccggggct 281 ||||| |||||||||||||||||||| Sbjct: 74219 ctggggccggggccggggccggggct 74244
>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete sequence Length = 159661 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 504 gatgcagttggcatggtacaggtgcttgcacggcatct 541 |||||||| || ||||||| ||||||||||||||||| Sbjct: 108020 gatgcagtcggagtggtacacgtgcttgcacggcatct 108057
>gb|AC005817.8| Mus musculus strain 129/Sv clone ct7-581i11 map 16, complete sequence Length = 188708 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 259 ggaccggggccggggccggggc 280 |||||||||||||||||||||| Sbjct: 166045 ggaccggggccggggccggggc 166066
>emb|Z94044.2|HS154P24 Human DNA sequence from clone RP1-154P24 on chromosome Xp11.1-11.23 Contains the 5' end of the gene for upstream regulatory element binding protein 1 (UREB1) and three CpG islands, complete sequence Length = 110870 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 259 ggaccggggccggggccggggc 280 |||||||||||||||||||||| Sbjct: 7028 ggaccggggccggggccggggc 7049
>gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genomic sequence, complete sequence Length = 139946 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 504 gatgcagttggcatggtacaggtgcttgcacggcatct 541 |||||||| || ||||||| ||||||||||||||||| Sbjct: 68527 gatgcagtcggagtggtacacgtgcttgcacggcatct 68490
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 504 gatgcagttggcatggtacaggtgcttgcacggcatct 541 |||||||| || ||||||| ||||||||||||||||| Sbjct: 32343644 gatgcagtcggagtggtacacgtgcttgcacggcatct 32343607
>gb|AC079043.27| Mus musculus strain C57BL/6J chromosome 16 clone rp23-397e16, complete sequence Length = 214471 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 259 ggaccggggccggggccggggc 280 |||||||||||||||||||||| Sbjct: 166079 ggaccggggccggggccggggc 166100
>gb|AC118542.20| Mus musculus strain C57BL/6J chromosome 16 clone rp23-117j21, complete sequence Length = 215057 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 259 ggaccggggccggggccggggc 280 |||||||||||||||||||||| Sbjct: 159041 ggaccggggccggggccggggc 159020
>dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A11 Length = 132352 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 504 gatgcagttggcatggtacaggtgcttgcacggcatct 541 |||||||| || ||||||| ||||||||||||||||| Sbjct: 119476 gatgcagtcggagtggtacacgtgcttgcacggcatct 119439
>dbj|AP004125.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1767_D02 Length = 139145 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 504 gatgcagttggcatggtacaggtgcttgcacggcatct 541 |||||||| || ||||||| ||||||||||||||||| Sbjct: 5157 gatgcagtcggagtggtacacgtgcttgcacggcatct 5120
>gb|AC133197.3| Mus musculus BAC clone RP23-228E15 from 8, complete sequence Length = 197899 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 256 ctgggaccggggccggggccggggct 281 ||||| |||||||||||||||||||| Sbjct: 35615 ctggggccggggccggggccggggct 35640
>gb|AC087064.27| Mus musculus strain C57BL/6J chromosome 16 clone rp23-428i4, complete sequence Length = 211848 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 259 ggaccggggccggggccggggc 280 |||||||||||||||||||||| Sbjct: 68696 ggaccggggccggggccggggc 68675
>emb|AL611984.15| Mouse DNA sequence from clone RP23-416J8 on chromosome 4, complete sequence Length = 209904 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 255 actgggaccggggccggggccggggc 280 |||||| ||||||||||||||||||| Sbjct: 105054 actggggccggggccggggccggggc 105079 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 256 ctgggaccggggccggggccggggc 280 ||||||| ||||||||||||||||| Sbjct: 105049 ctgggactggggccggggccggggc 105073 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 105067 ccggggccggggccggggct 105086
>gb|AC165948.2| Mus musculus BAC clone RP24-430M9 from chromosome 17, complete sequence Length = 176267 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 ctgggaccggggccggggccggggc 280 ||||| ||||||||||||||||||| Sbjct: 99476 ctggggccggggccggggccggggc 99452 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 99428 ccggggccggggccggggct 99409
>gb|AC148870.2| Chlamydomonas reinhardtii clone cr-13O11, complete sequence Length = 56858 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 256 ctgggaccggggccggggccggggc 280 ||||| ||||||||||||||||||| Sbjct: 44144 ctggggccggggccggggccggggc 44168 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 44210 ccggggccggggccggggct 44229
>ref|XM_369056.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00188.4) partial mRNA Length = 1644 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 448 ggcggcagcgagtggcggcaa 468 ||||||||||||||||||||| Sbjct: 651 ggcggcagcgagtggcggcaa 671
>gb|AC147555.2| Mus musculus BAC clone RP23-478E6 from chromosome 5, complete sequence Length = 176491 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 256 ctgggaccggggccggggccggggc 280 ||||| ||||||||||||||||||| Sbjct: 45054 ctggggccggggccggggccggggc 45078
>ref|XM_543585.2| PREDICTED: Canis familiaris similar to cleavage stimulation factor, 3 pre-RNA subunit 2, tau (LOC486459), mRNA Length = 1380 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 ctgggaccggggccggggccggggc 280 |||| |||||||||||||||||||| Sbjct: 845 ctggaaccggggccggggccggggc 821
>gb|AY459339.1| Oryza sativa (japonica cultivar-group) clone CL005170.5 R2R3-MYB gene region Length = 9432 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 517 tggtacaggtgcttgcacggcatct 541 ||||| ||||||||||||||||||| Sbjct: 8516 tggtataggtgcttgcacggcatct 8492
>ref|XM_547204.2| PREDICTED: Canis familiaris similar to K11G12.6 (LOC490083), mRNA Length = 1722 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 267 gccggggccggggctcgaccc 287 ||||||||||||||||||||| Sbjct: 99 gccggggccggggctcgaccc 119
>emb|AL442125.13| Human DNA sequence from clone RP11-230F18 on chromosome 13 Contains the 5' end of the gene for FLJ10704 (FLJ20092), a novel gene, a novel gene (FLJ20623), the TFDP1 gene for transcription factor Dp-1 (DP-1, DRTF1) and 5 CpG islands, complete sequence Length = 184889 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 257 tgggaccggggccggggccggggct 281 |||| |||||||||||||||||||| Sbjct: 120863 tggggccggggccggggccggggct 120887
>emb|AL355297.20| Human DNA sequence from clone RP11-230C9 on chromosome 6 Contains the gene for DAN15 protein, a H3 histone, family 3A (H3F3A) (H3F3, H3.3A) pseudogene, the 5' end of the gene for BRG1-binding protein ELD/OSA1 (p250R KIAA1235) and four CpG islands, complete sequence Length = 169218 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 ctgggaccggggccggggccggggc 280 ||||| ||||||||||||||||||| Sbjct: 152107 ctggggccggggccggggccggggc 152083
>gb|AF527735.1| Homo sapiens medulloblastoma antigen MU-MB-2.32 mRNA, partial cds Length = 360 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 256 ctgggaccggggccggggccggggc 280 ||||| ||||||||||||||||||| Sbjct: 208 ctggggccggggccggggccggggc 232 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 tgggaccggggccggggccggggc 280 |||| ||||||||||||||||||| Sbjct: 251 tggggccggggccggggccggggc 274
>emb|AL031258.12|HS335H7 Human DNA sequence from clone LA16c-335H7 on chromosome 16 Contains the MSLN (mesothelin) gene, GSSs and CpG islands, complete sequence Length = 37307 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 ctgggaccggggccggggccggggc 280 ||||| ||||||||||||||||||| Sbjct: 22177 ctggggccggggccggggccggggc 22153 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 ctgggaccggggccggggccggggc 280 ||||| ||||||||||||||||||| Sbjct: 22129 ctggggccggggccggggccggggc 22105
>emb|BX548154.1|CNS09SBK clone A24K23, A41I8 of Tetraodon nigroviridis Length = 265677 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 ggaccggggccggggccgggg 279 ||||||||||||||||||||| Sbjct: 21631 ggaccggggccggggccgggg 21651
>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29 Length = 339650 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 260 gaccggggccggggccggggc 280 ||||||||||||||||||||| Sbjct: 221563 gaccggggccggggccggggc 221543
>gb|AC080005.24| Homo sapiens 3 BAC RP11-475N22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 169583 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 ctgggaccggggccggggccggggc 280 ||||| ||||||||||||||||||| Sbjct: 65216 ctggggccggggccggggccggggc 65192
>gb|AE006464.1| Homo sapiens 16p13.3 sequence section 3 of 8 Length = 256073 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 ctgggaccggggccggggccggggc 280 ||||| ||||||||||||||||||| Sbjct: 241475 ctggggccggggccggggccggggc 241451 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 ctgggaccggggccggggccggggc 280 ||||| ||||||||||||||||||| Sbjct: 241427 ctggggccggggccggggccggggc 241403
>gb|AC112706.2| Homo sapiens chromosome 19 clone CTD-3195E18, complete sequence Length = 65069 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 257 tgggaccggggccggggccggggct 281 |||| |||||||||||||||||||| Sbjct: 31489 tggggccggggccggggccggggct 31465 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 31968 ccggggccggggccggggct 31949
>gb|AC113133.5| Homo sapiens chromosome 8, clone RP11-930P14, complete sequence Length = 137390 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggctc 282 ||||||||||||||||||||| Sbjct: 120319 ccggggccggggccggggctc 120299
>emb|BX572609.1|CNS09SBP Tetraodon nigroviridis BAC sequence Length = 265677 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 ggaccggggccggggccgggg 279 ||||||||||||||||||||| Sbjct: 21631 ggaccggggccggggccgggg 21651
>gb|AC090436.37| Chlamydomonas reinhardtii clone cr-3h1, complete sequence Length = 102653 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 257 tgggaccggggccggggccggggct 281 |||| |||||||||||||||||||| Sbjct: 31504 tggggccggggccggggccggggct 31528
>gb|AC090434.43| Chlamydomonas reinhardtii clone cr-1j6, complete sequence Length = 127686 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 257 tgggaccggggccggggccggggct 281 |||| |||||||||||||||||||| Sbjct: 116131 tggggccggggccggggccggggct 116155
>dbj|AB210214.1| Setaria italica GBSS1 gene, transposable element TSI-3 and transposable element TSI-6 in intron 1 Length = 4881 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 223 ggctcgcccccgcctcctccg 243 ||||||||||||||||||||| Sbjct: 1349 ggctcgcccccgcctcctccg 1369
>gb|DQ314862.1| Streptomyces hygroscopicus strain NRRL 2388 hygromycin A biosynthetic gene cluster, complete sequence Length = 39151 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 260 gaccggggccggggccggggc 280 ||||||||||||||||||||| Sbjct: 27319 gaccggggccggggccggggc 27299
>emb|CR354017.1| Gallus gallus finished cDNA, clone ChEST595d11 Length = 979 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 256 ctgggaccggggccggggccggggc 280 ||||| ||||||||||||||||||| Sbjct: 55 ctggggccggggccggggccggggc 79
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 gggaccggggccggggccggg 278 ||||||||||||||||||||| Sbjct: 5808386 gggaccggggccggggccggg 5808366 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 260 gaccggggccggggccggggc 280 ||||||||||||||||||||| Sbjct: 2354248 gaccggggccggggccggggc 2354268
>ref|XM_341626.2| PREDICTED: Rattus norvegicus guanine nucleotide binding protein, alpha stimulating, olfactory type (Gnal), mRNA Length = 1523 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 ctgggaccggggccggggccggggc 280 |||||| |||||||||||||||||| Sbjct: 303 ctgggatcggggccggggccggggc 279
>dbj|AP002746.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0671B11 Length = 168372 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 517 tggtacaggtgcttgcacggcatct 541 ||||| ||||||||||||||||||| Sbjct: 24814 tggtataggtgcttgcacggcatct 24790
>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710E05 Length = 179714 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 517 tggtacaggtgcttgcacggcatct 541 ||||| ||||||||||||||||||| Sbjct: 169010 tggtataggtgcttgcacggcatct 168986
>gb|AC004151.1|AC004151 Homo sapiens chromosome 19, cosmid R28738, complete sequence Length = 35116 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 cggggccggggccggggctcg 283 ||||||||||||||||||||| Sbjct: 9982 cggggccggggccggggctcg 10002
>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome Length = 156487 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 cggggccggggccggggctcg 283 ||||||||||||||||||||| Sbjct: 155422 cggggccggggccggggctcg 155442 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 263 cggggccggggccggggctcg 283 ||||||||||||||||||||| Sbjct: 127881 cggggccggggccggggctcg 127861
>gb|AC165951.3| Mus musculus BAC clone RP24-137B13 from chromosome 17, complete sequence Length = 209191 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 256 ctgggaccggggccggggccggggc 280 ||||| ||||||||||||||||||| Sbjct: 32037 ctggggccggggccggggccggggc 32061 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 32085 ccggggccggggccggggct 32104
>gb|AC164560.3| Mus musculus BAC clone RP23-192D6 from chromosome 3, complete sequence Length = 200505 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 tgacaggcccagggccagctc 361 ||||||||||||||||||||| Sbjct: 111314 tgacaggcccagggccagctc 111334
>gb|AC158219.4| Mus musculus chromosome 8, clone RP23-189N10, complete sequence Length = 215819 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 256 ctgggaccggggccggggccggggc 280 |||||||| |||||||||||||||| Sbjct: 19974 ctgggaccagggccggggccggggc 19998
>gb|AC161433.5| Mus musculus chromosome 8, clone RP23-50F12, complete sequence Length = 253440 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 256 ctgggaccggggccggggccggggc 280 |||||||| |||||||||||||||| Sbjct: 234808 ctgggaccagggccggggccggggc 234832
>emb|AL732626.8| Mouse DNA sequence from clone RP23-191F22 on chromosome 4, complete sequence Length = 151688 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 ctgggaccggggccggggccggggc 280 ||||| ||||||||||||||||||| Sbjct: 106960 ctggggccggggccggggccggggc 106936
>ref|NM_201922.1| Arabidopsis thaliana RHC1A; protein binding / ubiquitin-protein ligase/ zinc ion binding AT2G40830 (RHC1A) transcript variant AT2G40830.2 mRNA, complete cds Length = 1494 Score = 40.1 bits (20), Expect = 9.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 472 gggcaggagttgtgctgaaccaaccaggggatgatgcagt 511 ||||| |||||||||||||||| ||| |||| ||||||| Sbjct: 961 gggcaagagttgtgctgaaccagccacgggacaatgcagt 922
>ref|NM_201923.1| Arabidopsis thaliana RHC1A; protein binding / ubiquitin-protein ligase/ zinc ion binding AT2G40830 (RHC1A) transcript variant AT2G40830.3 mRNA, complete cds Length = 1398 Score = 40.1 bits (20), Expect = 9.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 472 gggcaggagttgtgctgaaccaaccaggggatgatgcagt 511 ||||| |||||||||||||||| ||| |||| ||||||| Sbjct: 865 gggcaagagttgtgctgaaccagccacgggacaatgcagt 826
>ref|NM_129646.3| Arabidopsis thaliana RHC1A; protein binding / ubiquitin-protein ligase/ zinc ion binding AT2G40830 (RHC1A) transcript variant AT2G40830.1 mRNA, complete cds Length = 1419 Score = 40.1 bits (20), Expect = 9.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 472 gggcaggagttgtgctgaaccaaccaggggatgatgcagt 511 ||||| |||||||||||||||| ||| |||| ||||||| Sbjct: 884 gggcaagagttgtgctgaaccagccacgggacaatgcagt 845
>ref|NM_187510.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 840 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 gtgcttgcacggcatctccc 544 |||||||||||||||||||| Sbjct: 465 gtgcttgcacggcatctccc 446
>gb|DQ213285.1| Taeniopygia guttata clone 0061P0019F06 C35 protein cDNA-like mRNA, complete sequence Length = 987 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 gggaccggggccggggccggggct 281 |||||||||||||||| ||||||| Sbjct: 62 gggaccggggccggggacggggct 85
>gb|BT018499.1| Zea mays clone EL01N0427A08.d mRNA sequence Length = 1431 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 gtgcttgcacggcatctccc 544 |||||||||||||||||||| Sbjct: 658 gtgcttgcacggcatctccc 639
>gb|AC161812.3| Mus musculus chromosome 15, clone RP23-195I24, complete sequence Length = 204464 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 258 gggaccggggccggggccggggct 281 ||||||||| |||||||||||||| Sbjct: 176977 gggaccgggaccggggccggggct 176954
>ref|XM_871006.1| PREDICTED: Bos taurus similar to zinc finger protein 579 (LOC618680), mRNA Length = 1215 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 accggggccggggccggggc 280 |||||||||||||||||||| Sbjct: 314 accggggccggggccggggc 333
>ref|XM_864654.1| PREDICTED: Bos taurus similar to gametogenetin isoform 1 (LOC613654), mRNA Length = 1851 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 tgggaccggggccggggccggggc 280 |||| ||||||||||||||||||| Sbjct: 1398 tggggccggggccggggccggggc 1375
>gb|AY458590.1| Mus musculus transcriptional intermediary factor 1 gamma (Tif1g) mRNA, complete cds Length = 5686 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 914 ccggggccggggccggggct 895
>ref|XM_585605.2| PREDICTED: Bos taurus similar to 150 kDa oxygen-regulated protein precursor (Orp150) (Hypoxia up-regulated 1) (LOC508773), mRNA Length = 4298 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 3003 ccggggccggggccggggct 2984
>gb|BC064443.1| Mus musculus serine/threonine kinase 39, STE20/SPS1 homolog (yeast), mRNA (cDNA clone MGC:69607 IMAGE:6843981), complete cds Length = 3268 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 228 ccggggccggggccggggct 209
>gb|BC051964.1| Mus musculus serine/threonine kinase 39, STE20/SPS1 homolog (yeast), mRNA (cDNA clone MGC:62237 IMAGE:5698326), complete cds Length = 3555 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 515 ccggggccggggccggggct 496
>ref|XM_957085.1| Neurospora crassa OR74A hypothetical protein (NCU07039.1) partial mRNA Length = 1248 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 1108 ccggggccggggccggggct 1089
>ref|XM_327324.1| Neurospora crassa OR74A hypothetical protein (NCU07039.1) partial mRNA Length = 1248 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 1108 ccggggccggggccggggct 1089
>ref|NM_001040602.1| Bos taurus similar to Rho-related GTP-binding protein RhoF (Rho-family GTPase Rif) (Rho in filopodia) (LOC617894), mRNA Length = 2088 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 tgggaccggggccggggccggggc 280 |||| ||||||||||||||||||| Sbjct: 60 tggggccggggccggggccggggc 37
>ref|NM_000076.1| Homo sapiens cyclin-dependent kinase inhibitor 1C (p57, Kip2) (CDKN1C), mRNA Length = 1511 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 879 ccggggccggggccggggct 860
>ref|NM_002824.4| Homo sapiens parathymosin (PTMS), mRNA Length = 1150 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 327 ccggggccggggccggggct 308
>ref|NM_033112.2| Homo sapiens chromosome 6 open reading frame 153 (C6orf153), mRNA Length = 1177 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 262 ccggggccggggccggggctcgac 285 ||||||||||||||||||| |||| Sbjct: 37 ccggggccggggccggggcccgac 60
>gb|AC079871.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-128P4, complete sequence Length = 125209 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 18337 ccggggccggggccggggct 18356
>gb|BC017025.1| Homo sapiens parathymosin, mRNA (cDNA clone IMAGE:3900998), partial cds Length = 875 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 46 ccggggccggggccggggct 27
>gb|AC147136.2| Pan troglodytes BAC clone CH251-334C1 from Y, complete sequence Length = 161852 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 tggcatggtacaggtgcttg 531 |||||||||||||||||||| Sbjct: 83799 tggcatggtacaggtgcttg 83818
>ref|XM_921450.2| PREDICTED: Mus musculus rearranged L-myc fusion sequence, transcript variant 7 (Rlf), mRNA Length = 2752 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 48 ccggggccggggccggggct 67
>ref|XM_909848.2| PREDICTED: Mus musculus rearranged L-myc fusion sequence, transcript variant 5 (Rlf), mRNA Length = 6705 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 43 ccggggccggggccggggct 62
>ref|XM_543678.2| PREDICTED: Canis familiaris aquaporin 2 (aqp2), mRNA Length = 1019 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 902 ccggggccggggccggggct 883
>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome Length = 135301 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 ctgggaccggggccggggccgggg 279 ||||| |||||||||||||||||| Sbjct: 101257 ctggggccggggccggggccgggg 101280
>gb|AC121833.3| Mus musculus BAC clone RP24-69C16 from chromosome 3, complete sequence Length = 224456 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 15245 ccggggccggggccggggct 15226
>gb|AC006333.3| Homo sapiens BAC clone RP11-390E23 from 7, complete sequence Length = 187532 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 183275 ccggggccggggccggggct 183294
>ref|XM_544373.2| PREDICTED: Canis familiaris similar to Ectoderm-neural cortex-1 protein (ENC-1) (p53-induced protein 10) (Nuclear matrix protein NRP/B) (LOC487247), mRNA Length = 1944 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ccagggccagctccggctcc 368 |||||||||||||||||||| Sbjct: 206 ccagggccagctccggctcc 225
>gb|AC164089.4| Mus musculus BAC clone RP23-70G12 from chromosome 3, complete sequence Length = 223387 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 95658 ccggggccggggccggggct 95639
>gb|AC136953.17| Medicago truncatula clone mth2-20h6, complete sequence Length = 94019 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 tgggaccggggccggggccggggc 280 ||||| |||||||||||||||||| Sbjct: 7511 tgggagcggggccggggccggggc 7534
>gb|AC150446.8| Medicago truncatula clone mth2-101n14, complete sequence Length = 109162 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 tgggaccggggccggggccggggc 280 ||||| |||||||||||||||||| Sbjct: 7711 tgggagcggggccggggccggggc 7688
>gb|BC103016.1| Bos taurus similar to Rho-related GTP-binding protein RhoF (Rho-family GTPase Rif) (Rho in filopodia), mRNA (cDNA clone MGC:128150 IMAGE:7945736), complete cds Length = 2088 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 tgggaccggggccggggccggggc 280 |||| ||||||||||||||||||| Sbjct: 60 tggggccggggccggggccggggc 37
>emb|BX649589.3| Human DNA sequence from clone RP5-1175C6 on chromosome 9, complete sequence Length = 35831 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 5239 ccggggccggggccggggct 5258
>emb|AL356740.19| Human DNA sequence from clone RP11-120K24 on chromosome 13 Contains the 3' end of the ATP11A gene for ATPase Class VI type 11A, the 5' end of the MCF2L gene for a MCF.2 cell line derived transforming sequence-like gene, a novel gene and eight CpG islands, complete sequence Length = 170928 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 32041 ccggggccggggccggggct 32022
>emb|AL354836.13| Human DNA sequence from clone RP11-157P1 on chromosome 20 Contains the LAMA5 gene for laminin alpha 5 (KIAA0533), the GP110 gene for cell membrane glycoprotein (surface antigen), 110000M(r), the KIAA0772 gene with similarity to the gene for oxysterol-binding protein and two putative novel genes, complete sequence Length = 141056 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 3179 ccggggccggggccggggct 3160
>emb|AL136304.10| Human DNA sequence from clone RP1-20C7 on chromosome 6p12.3-21.2 Contains the PPP2R5D gene for delta variant of protein phosphatase 2 regulatory subunit B (B56), the MEA gene for male-enhanced antigen, the gene for testis intracellular mediator protein (PEAS), the gene for a novel protein (LOC88745), the 3' end of a gene for a novel protein (KIAA0076 KIAA0708) and a CpG island, complete sequence Length = 65612 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 262 ccggggccggggccggggctcgac 285 ||||||||||||||||||| |||| Sbjct: 39265 ccggggccggggccggggcccgac 39288
>emb|AL109947.19|HSJ919F19 Human DNA sequence from clone RP5-919F19 on chromosome 6q16.3-22.1 Contains the PPIL6 gene for peptidylprolyl isomerase (cyclophilin)-like 6 protein, the SMPD2 gene for sphingomyelin phosphodiesterase 2 neutral membrane (neutral sphingomyelinase), the MICAL1 gene for microtubule associated monoxygenase, calponin and LIM domain containing 1, the ZNF450 gene for zinc finger protein 450 and three CpG islands, complete sequence Length = 128960 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 tgggaccggggccggggccggggc 280 |||| ||||||||||||||||||| Sbjct: 82698 tggggccggggccggggccggggc 82721
>gb|AC013791.9| Homo sapiens chromosome 11, clone RP11-19N21, complete sequence Length = 174569 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 57512 ccggggccggggccggggct 57493
>emb|BX883045.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 4/11 Length = 346406 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 97486 ccggggccggggccggggct 97505
>gb|BC067842.1| Homo sapiens cyclin-dependent kinase inhibitor 1C (p57, Kip2), mRNA (cDNA clone MGC:87429 IMAGE:30332904), complete cds Length = 1584 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 904 ccggggccggggccggggct 885
>emb|BX284747.1|NCB9B11 Neurospora crassa DNA linkage group II BAC clone B9B11 Length = 103284 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 95164 ccggggccggggccggggct 95145
>gb|BT008726.1| Arabidopsis thaliana At2g40830 gene, complete cds Length = 987 Score = 40.1 bits (20), Expect = 9.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 472 gggcaggagttgtgctgaaccaaccaggggatgatgcagt 511 ||||| |||||||||||||||| ||| |||| ||||||| Sbjct: 683 gggcaagagttgtgctgaaccagccacgggacaatgcagt 644
>gb|AY139987.1| Arabidopsis thaliana expressed protein (At2g40830) mRNA, complete cds Length = 1377 Score = 40.1 bits (20), Expect = 9.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 472 gggcaggagttgtgctgaaccaaccaggggatgatgcagt 511 ||||| |||||||||||||||| ||| |||| ||||||| Sbjct: 881 gggcaagagttgtgctgaaccagccacgggacaatgcagt 842
>gb|AC104450.2| Homo sapiens chromosome 3 clone RP11-493K19, complete sequence Length = 217337 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 tgggaccggggccggggccggggc 280 |||| ||||||||||||||||||| Sbjct: 51793 tggggccggggccggggccggggc 51816
>dbj|BS000634.2| Pan troglodytes chromosome Y clone: PTB-592K24, complete sequence Length = 170276 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 tggcatggtacaggtgcttg 531 |||||||||||||||||||| Sbjct: 9112 tggcatggtacaggtgcttg 9131
>dbj|BS000575.1| Pan troglodytes chromosome Y clone:PTB-031L12, complete sequences Length = 158061 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 tggcatggtacaggtgcttg 531 |||||||||||||||||||| Sbjct: 55202 tggcatggtacaggtgcttg 55183
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 tggcatggtacaggtgcttg 531 |||||||||||||||||||| Sbjct: 17487889 tggcatggtacaggtgcttg 17487870
>gb|AC104834.4| Mus Musculus Strain C57BL6/J Chromosome 15 RP23-274F23, complete sequence Length = 215113 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 gggaccggggccggggccggggct 281 ||||||||| |||||||||||||| Sbjct: 103056 gggaccgggaccggggccggggct 103079
>emb|CR600415.1| full-length cDNA clone CS0DD007YL20 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 2156 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 27 ccggggccggggccggggct 8
>gb|AC002409.3| Arabidopsis thaliana chromosome 2 clone T20B5 map CIC11C08, complete sequence Length = 72839 Score = 40.1 bits (20), Expect = 9.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 472 gggcaggagttgtgctgaaccaaccaggggatgatgcagt 511 ||||| |||||||||||||||| ||| |||| ||||||| Sbjct: 14120 gggcaagagttgtgctgaaccagccacgggacaatgcagt 14081
>dbj|AK148456.1| Mus musculus adult pancreas islet cells cDNA, RIKEN full-length enriched library, clone:C820004K09 product:serine/threonine kinase 39, STE20/SPS1 homolog (yeast), full insert sequence Length = 1955 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 264 ccggggccggggccggggct 245
>gb|AC093429.2| Homo sapiens chromosome 1 clone RP11-465K1, complete sequence Length = 182165 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 103121 ccggggccggggccggggct 103140
>ref|NM_016866.2| Mus musculus serine/threonine kinase 39, STE20/SPS1 homolog (yeast) (Stk39), mRNA Length = 3268 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 228 ccggggccggggccggggct 209
>ref|NM_053170.1| Mus musculus tripartite motif protein 33 (Trim33), mRNA Length = 5686 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 914 ccggggccggggccggggct 895
>gb|AC135207.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1261C08, complete sequence Length = 99910 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 gtgcttgcacggcatctccc 544 |||||||||||||||||||| Sbjct: 64483 gtgcttgcacggcatctccc 64464
>gb|AF328738.1|AF328738 Agelaius phoeniceus cosmid Rwcos3, partial sequence Length = 45375 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 648 ggactgcggagccggcgctg 667 |||||||||||||||||||| Sbjct: 10594 ggactgcggagccggcgctg 10613
>dbj|AK017292.1| Mus musculus 6 days neonate head cDNA, RIKEN full-length enriched library, clone:5430411A13 product:serine/threonine kinase 39, STE20/SPS1 homolog (yeast), full insert sequence Length = 2039 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 186 ccggggccggggccggggct 167
>gb|AC134238.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0016G06, complete sequence Length = 119910 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 gtgcttgcacggcatctccc 544 |||||||||||||||||||| Sbjct: 627 gtgcttgcacggcatctccc 608
>emb|BX819627.1|CNS0A8XL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB95ZG01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1299 Score = 40.1 bits (20), Expect = 9.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 472 gggcaggagttgtgctgaaccaaccaggggatgatgcagt 511 ||||| |||||||||||||||| ||| |||| ||||||| Sbjct: 849 gggcaagagttgtgctgaaccagccacgggacaatgcagt 810
>emb|BX819266.1|CNS0A8TG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB61ZG11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1332 Score = 40.1 bits (20), Expect = 9.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 472 gggcaggagttgtgctgaaccaaccaggggatgatgcagt 511 ||||| |||||||||||||||| ||| |||| ||||||| Sbjct: 884 gggcaagagttgtgctgaaccagccacgggacaatgcagt 845
>emb|BX820191.1|CNS0A8HO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS8ZG11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1407 Score = 40.1 bits (20), Expect = 9.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 472 gggcaggagttgtgctgaaccaaccaggggatgatgcagt 511 ||||| |||||||||||||||| ||| |||| ||||||| Sbjct: 961 gggcaagagttgtgctgaaccagccacgggacaatgcagt 922
>gb|AC148307.3| Pan troglodytes BAC clone RP43-44G20 from chromosome 11, complete sequence Length = 199161 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 135587 ccggggccggggccggggct 135606
>gb|AC125494.2| Homo sapiens 12 PAC RP4-761J14 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 143979 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 31714 ccggggccggggccggggct 31733
>gb|AF319953.1|AF319953 Neurospora crassa GATA type zinc finger protein ASD4 (Asd-4) gene, complete cds Length = 2215 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 1476 ccggggccggggccggggct 1457
>dbj|D64137.1|HUMKIP2 Homo sapiens KIP2 gene for Cdk-inhibitor p57KIP2, complete cds (exon1-4) Length = 3158 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 1846 ccggggccggggccggggct 1827
>gb|AC093802.3| Homo sapiens BAC clone RP11-315F22 from 2, complete sequence Length = 165535 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 tgggaccggggccggggccggggc 280 |||| ||||||||||||||||||| Sbjct: 41340 tggggccggggccggggccggggc 41317
>gb|AF099988.1|AF099988 Mus musculus Ste-20 related kinase SPAK mRNA, complete cds Length = 1928 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 204 ccggggccggggccggggct 185
>gb|BC008535.1| Mus musculus Traf3 interacting protein 2, mRNA (cDNA clone IMAGE:3492600) Length = 1565 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 accggggccggggccggggc 280 |||||||||||||||||||| Sbjct: 85 accggggccggggccggggc 66
>gb|BC008534.1| Mus musculus Traf3 interacting protein 2, mRNA (cDNA clone IMAGE:3492576) Length = 1565 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 accggggccggggccggggc 280 |||||||||||||||||||| Sbjct: 85 accggggccggggccggggc 66
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 2002147 ccggggccggggccggggct 2002166
>gb|AF170972.1|AF170972 Agelaius phoeniceus cosmid 10, complete sequence Length = 38786 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 648 ggactgcggagccggcgctg 667 |||||||||||||||||||| Sbjct: 7349 ggactgcggagccggcgctg 7330
>gb|AC022167.7| Homo sapiens chromosome 16 clone RP11-77H9, complete sequence Length = 180705 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 63554 ccggggccggggccggggct 63535
>emb|BX842598.1| Neurospora crassa DNA linkage group II BAC clone B8L10 Length = 73541 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 26101 ccggggccggggccggggct 26082
>dbj|AK129293.1| Mus musculus mRNA for mKIAA1113 protein Length = 4871 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 167 ccggggccggggccggggct 148
>dbj|AK099268.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018C07, full insert sequence Length = 1440 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 gtgcttgcacggcatctccc 544 |||||||||||||||||||| Sbjct: 696 gtgcttgcacggcatctccc 677
>dbj|AK067221.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097C11, full insert sequence Length = 1475 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 gtgcttgcacggcatctccc 544 |||||||||||||||||||| Sbjct: 694 gtgcttgcacggcatctccc 675
>gb|BC011933.2| Homo sapiens chromosome 6 open reading frame 153, mRNA (cDNA clone MGC:20327 IMAGE:4300313), complete cds Length = 1177 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 262 ccggggccggggccggggctcgac 285 ||||||||||||||||||| |||| Sbjct: 37 ccggggccggggccggggcccgac 60
>gb|AF119361.1|AF119361 Frankia sp. EuIK1 NifK (nifK), NifE (nifE), NifN (nifN), NifX (nifX), NifW (nifW), NifZ (nifZ), NifB (nifB), NifV (nifV), NifS (nifS), ferredoxin oxidoreductase a-subunit, ferredoxin oxidoreductase b-subunit, and ferredoxin I (fdxI) genes, complete cds; and unknown genes Length = 15056 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 accggggccggggccggggc 280 |||||||||||||||||||| Sbjct: 9499 accggggccggggccggggc 9480 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 253 gaactgggaccggggccggggccggggc 280 |||| ||| ||||||||||||||||||| Sbjct: 9501 gaaccggggccggggccggggccggggc 9474
>emb|AJ223743.2|SSAJ3743 Sus scrofa V-ATPase gene, exon 1 Length = 1766 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 ctgggaccggggccggggccgggg 279 ||||| |||||||||||||||||| Sbjct: 1486 ctggggccggggccggggccgggg 1463
>gb|AF079180.1|AF079180 Arabidopsis thaliana RING-H2 finger protein RHC1a mRNA, complete cds Length = 1422 Score = 40.1 bits (20), Expect = 9.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 472 gggcaggagttgtgctgaaccaaccaggggatgatgcagt 511 ||||| |||||||||||||||| ||| |||| ||||||| Sbjct: 870 gggcaagagttgtgctgaaccagccacgggacaatgcagt 831
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 accggggccggggccggggc 280 |||||||||||||||||||| Sbjct: 4275750 accggggccggggccggggc 4275731
>gb|AC005602.1|AC005602 Homo sapiens chromosome 19, cosmid F19843, complete sequence Length = 39951 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 20418 ccggggccggggccggggct 20399
>gb|AC003047.1|AC003047 Homo sapiens Xp22 Cosmid U152D7 (Lawrence Livermore human cosmid library) complete sequence Length = 39213 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 29073 ccggggccggggccggggct 29054
>gb|U48869.1|HSU48869 Human cdk-inhibitor p57/KIP2 (CDKN1C) gene, complete cds Length = 2211 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 1029 ccggggccggggccggggct 1010
>gb|U22398.1|HSU22398 Human Cdk-inhibitor p57KIP2 (KIP2) mRNA, complete cds Length = 1511 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 879 ccggggccggggccggggct 860
>emb|AL645854.10| Mouse DNA sequence from clone RP23-192P17 on chromosome 11, complete sequence Length = 211829 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 25172 ccggggccggggccggggct 25191
>gb|M24398.1|HUMTHYP Human parathymosin mRNA, complete cds Length = 1109 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 296 ccggggccggggccggggct 277
>gb|M84465.1|HSBP135B Bovine herpesvirus type 1 p135 protein (EI2.9/E2.6) gene, complete cds Length = 2639 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 ctgggaccggggccggggccgggg 279 ||||| |||||||||||||||||| Sbjct: 1780 ctggggccggggccggggccgggg 1757
>gb|M61143.1|HSBLRAA Bovine herpesvirus type 1 latency-related open reading frames 1 and 2, complete cds Length = 2611 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 ctgggaccggggccggggccgggg 279 ||||| |||||||||||||||||| Sbjct: 1565 ctggggccggggccggggccgggg 1588
>emb|AJ001216.1|HSCGGE7 Homo sapiens DNA for (CGG)n trinucleotide repeat region, isolate E7 Length = 6170 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 ctgggaccggggccggggccgggg 279 ||||| |||||||||||||||||| Sbjct: 3732 ctggggccggggccggggccgggg 3755
>gb|BC039188.1| Homo sapiens, clone IMAGE:5186347, mRNA Length = 871 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 728 ccggggccggggccggggct 709
>gb|AC090481.9| Homo sapiens Xp BAC RP11-8H7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 44400 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccggggccggggccggggct 281 |||||||||||||||||||| Sbjct: 32237 ccggggccggggccggggct 32218
>gb|K02182.1|STMENDH Streptomyces plicatus endo-beta-N-acetylglucosaminidase H gene Length = 1104 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 accggggccggggccggggc 280 |||||||||||||||||||| Sbjct: 209 accggggccggggccggggc 190 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,116,959 Number of Sequences: 3902068 Number of extensions: 4116959 Number of successful extensions: 89802 Number of sequences better than 10.0: 166 Number of HSP's better than 10.0 without gapping: 172 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 88397 Number of HSP's gapped (non-prelim): 1372 length of query: 707 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 684 effective length of database: 17,143,297,704 effective search space: 11726015629536 effective search space used: 11726015629536 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
