>CAPP_BURPS (Q63W75) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)|
           (PEPC)
          Length = 994

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
 Frame = -3

Query: 526 NGSLRTKRRSSFSNSEYP---ESGTKNTPVPSRK-----PSYMAPTESLKAKLRGPPRLD 371
           +GS R  RR++ S+S  P   E   +    P+RK        +APT +  AK +G  R D
Sbjct: 4   SGSARATRRNAVSSSSAPAHAEPPARRAAKPARKLDGAAARPLAPTNAASAKPQGRTRED 63

Query: 370 SDLPV 356
            D P+
Sbjct: 64  KDRPL 68

>CAPP_BURMA (Q62LC1) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)|
           (PEPC)
          Length = 994

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
 Frame = -3

Query: 526 NGSLRTKRRSSFSNSEYP---ESGTKNTPVPSRK-----PSYMAPTESLKAKLRGPPRLD 371
           +GS R  RR++ S+S  P   E   +    P+RK        +APT +  AK +G  R D
Sbjct: 4   SGSARATRRNAVSSSSAPAHAEPPARRAAKPARKLDGAAARPLAPTNAASAKPQGRTRED 63

Query: 370 SDLPV 356
            D P+
Sbjct: 64  KDRPL 68

>VE2_HPV49 (P36795) Regulatory protein E2|
          Length = 488

 Score = 30.8 bits (68), Expect = 4.5
 Identities = 22/81 (27%), Positives = 32/81 (39%)
 Frame = -3

Query: 490 SNSEYPESGTKNTPVPSRKPSYMAPTESLKAKLRGPPRLDSDLPVDKNGFTRRQSLPSAA 311
           SN+         TP  +   +    T +  A   G P L S     K  + R+ S P+AA
Sbjct: 212 SNASPVHDTVDETPTSTTATTTTFSTTTATATATGAPELSSKTGTRKGRYGRKDSSPTAA 271

Query: 310 NNRGIKTEWRR*RGYQTSIRR 248
           +N   +   RR R    + RR
Sbjct: 272 SNSRKEVSRRRSRSRTRTRRR 292

>KCM1_XENLA (Q91636) Kinesin central motor 1 (XKCM1)|
          Length = 730

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = -3

Query: 472 ESGTKNTPVPSRKPSYMAPTESLKAKLRGPPRLDSDLPVDKNGFTRRQSLPSAANNRG 299
           E   ++TP+P ++ S  A + S K  +   PRL + +          +SLPS  NN+G
Sbjct: 140 EMEAESTPLPIQQNSVQARSRSTKVSIAEEPRLQTRI-----SEIVEESLPSGRNNQG 192

>JIP4_HUMAN (O60271) C-jun-amino-terminal kinase-interacting protein 4|
           (JNK-interacting protein 4) (JIP-4) (JNK-associated
           leucine-zipper protein) (JLP) (Sperm-associated antigen
           9) (Mitogen-activated protein kinase 8-interacting
           protein 4) (Human lung ca
          Length = 1321

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 7/90 (7%)
 Frame = -3

Query: 526 NGSLRTKRRSS----FSNSEYPESGTKNTPVPSRKPSYMAPTESLKAKLRGPPRLDSDLP 359
           N +++ K+RSS    FS      S T   P P     Y APT  +   ++      S LP
Sbjct: 541 NPAMQEKKRSSIWQFFSRLFSSSSNTTKKPEPPVNLKYNAPTSHVTPSVKKRSSTLSQLP 600

Query: 358 VDKN---GFTRRQSLPSAANNRGIKTEWRR 278
            DK+    F   ++  S A+ R  K E  R
Sbjct: 601 GDKSKAFDFLSEETEASLASRREQKREQYR 630

>YMF11_MARPO (P38456) Hypothetical 83.1 kDa protein in COB-ATPA intergenic|
           region (ORF 732)
          Length = 732

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 16/52 (30%), Positives = 29/52 (55%)
 Frame = -1

Query: 573 LQKGKKRLGPRKNLCLMEALEPREGLRSLIQNTRRVEPRILQFHQGSQAIWL 418
           L++G K LGP        AL+ +   R  + +   + PR+L+ H+ S+A+W+
Sbjct: 175 LERGSKALGPESPKETSLALQKKRR-RPEMASPHTILPRVLRTHKVSRALWV 225

>AP3D_YEAST (Q08951) AP-3 complex subunit delta (Adapter-related protein|
           complex 3 delta subunit) (Delta-adaptin 3) (AP-3 complex
           delta subunit) (Delta-adaptin)
          Length = 932

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -3

Query: 691 KLASDTKYDLETPFLTGDKVNEPTTVSQADEVN 593
           KLA D   DLETPFLT +  +E     ++D ++
Sbjct: 648 KLAVDENLDLETPFLTKEAADELLDEQKSDAIS 680

>NSD1_MOUSE (O88491) Histone-lysine N-methyltransferase, H3 lysine-36 and H4|
           lysine-20 specific (EC 2.1.1.43) (H3-K36-HMTase)
           (H4-K20-HMTase) (Nuclear receptor binding SET domain
           containing protein 1) (NR-binding SET domain containing
           protein)
          Length = 2588

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
 Frame = -3

Query: 523 GSLRTKRRSSFSNSEYPESGTK-NTPVPSRKPSYMAPTESLKAKLRGPPRLDSDLPVDKN 347
           GS +T    +   S+   S  K ++P+P  +P +    + L  K   PP + ++ P+ K 
Sbjct: 609 GSTKTMEPETAELSQVNLSDLKISSPIPKPQPEFR--NDGLTTKFSAPPGIRNENPLTKG 666

Query: 346 GFTRRQSLP 320
           G   +  LP
Sbjct: 667 GLANQTLLP 675

>RPB1_YEAST (P04050) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
            (RNA polymerase II subunit 1) (B220)
          Length = 1733

 Score = 29.6 bits (65), Expect = 10.0
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -3

Query: 673  KYDLETPFLTGDKVNEPTTVSQADEVNL 590
            KYD + P  TG+ V EP  V + D VNL
Sbjct: 1286 KYDRKVPSPTGEYVKEPEWVLETDGVNL 1313

>YQ56_CAEEL (Q09252) Hypothetical protein C16C10.6|
          Length = 392

 Score = 29.6 bits (65), Expect = 10.0
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = -3

Query: 529 PNGSLRTKRRSSFSNS--EYPESGTKNTPVPSRKPSYMAPTESLKAKLRGPPRLDSDLPV 356
           P    RT   S  S    E  ESG++ +P    + S  AP  SLK KL+ P ++D +  +
Sbjct: 298 PRARRRTSSPSPTSRKSIESRESGSRRSPEGKSEKSEKAPKISLKDKLK-PKKIDKEARL 356

Query: 355 D 353
           D
Sbjct: 357 D 357

>KI18A_HUMAN (Q8NI77) Kinesin family member 18A|
          Length = 898

 Score = 29.6 bits (65), Expect = 10.0
 Identities = 27/72 (37%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
 Frame = -3

Query: 532 LPNGSLRTKRR---SSFSNSEYPESGTKNTPVPSRKPSYMAPTESLKAKLR-GPPRLDSD 365
           LPN +    +R   SSFS          + PVPS  PSYMA T + K K +      +S 
Sbjct: 789 LPNDNKDILQRLDPSSFSTKH-------SMPVPSMVPSYMAMTTAAKRKRKLTSSTSNSS 841

Query: 364 LPVDKN-GFTRR 332
           L  D N GF +R
Sbjct: 842 LTADVNSGFAKR 853

>PO121_RAT (P52591) Nuclear envelope pore membrane protein POM 121 (Pore|
           membrane protein of 121 kDa) (P145)
          Length = 1199

 Score = 29.6 bits (65), Expect = 10.0
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = -3

Query: 535 PLPNGSLRTKRRSSFSNSEYPESGTKNTPVPSRKPSYMAPTESLKAKLRGP 383
           PL     + +   + S+SE PE+ T   P P + PS +AP   L + L GP
Sbjct: 571 PLLESLKKMQESPAPSSSEPPEAATVAAPSPPKTPSLLAP---LVSPLTGP 618


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,211,742
Number of Sequences: 219361
Number of extensions: 1870130
Number of successful extensions: 5100
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5100
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7536258401
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)