>DXS_PSESM (Q889Q1) 1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7)|
           (1-deoxyxylulose-5-phosphate synthase) (DXP synthase)
           (DXPS)
          Length = 631

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = -1

Query: 247 KDGVDVSGVSVLFEELYIHIYVDELVMVVLLA*IMCDGCMSKPVLVIMHIYI 92
           K+G D+   S  F E Y  + + E   V L A + C+G  SKPV+ I   ++
Sbjct: 355 KEGSDLVDFSERFPERYFDVAIAEQHAVTLAAGMACEG--SKPVVAIYSTFL 404

>ENVE_SALTY (Q56030) Probable lipoprotein envE precursor|
          Length = 173

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 409 GVRDGTTLILWEWTEGDNQRW 347
           G ++GT +IL+  T  DNQRW
Sbjct: 108 GTKEGTPIILYSCTGNDNQRW 128

>DXS_PSEPK (Q88QG7) 1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7)|
           (1-deoxyxylulose-5-phosphate synthase) (DXP synthase)
           (DXPS)
          Length = 631

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = -1

Query: 247 KDGVDVSGVSVLFEELYIHIYVDELVMVVLLA*IMCDGCMSKPVLVIMHIYI 92
           K+G D+   S  + E Y  + + E   V L A + C+G  SKPV+ I   ++
Sbjct: 354 KEGSDLVDFSERYPERYFDVAIAEQHAVTLAAGMACEG--SKPVVAIYSTFL 403

>FINC_RAT (P04937) Fibronectin precursor (FN)|
          Length = 2477

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
 Frame = +3

Query: 291  ALFEPTNFSICIVHQATIFQRWLSPSVH--SHRMRVVP-SRTPPW---SLSPWSAS 440
            A+  PTN     V   T+  +W +PSV    +R+RV P  +T P    +LSP S S
Sbjct: 1811 AIPAPTNLKFTQVSPTTLTAQWTAPSVKLTGYRVRVTPKEKTGPMKEINLSPDSTS 1866

>MDL4_PRUSE (O82784) (R)-mandelonitrile lyase 4 precursor (EC 4.1.2.10)|
           (Hydroxynitrile lyase 4) ((R)-oxynitrilase 4)
          Length = 574

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
 Frame = +3

Query: 219 ETPLTSTPSFLFQKHSVLAYY*DRALFEPTNFSICI----VHQATIFQRWLSPSVHSHRM 386
           E+ LTS    +   H  +  Y +     P NF   +    +  +T+    ++   +   +
Sbjct: 303 ESYLTSLNISVVASHPYVGQYVND---NPRNFINILPPNPIEPSTVTVLGITSDFYQCSL 359

Query: 387 RVVPSRTPPWSLSPWSASKFK*MLFTILMQR*PAPTSLLSVQRTDSSRVS 536
             +P  TPP+SL P ++       F  ++ + P P S  S+    SS VS
Sbjct: 360 SSLPFDTPPFSLFPTTSYPLPNQTFAHIVSKVPGPLSAGSLTLQSSSNVS 409


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,357,759
Number of Sequences: 219361
Number of extensions: 1635781
Number of successful extensions: 3513
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3513
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4200495993
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)