ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd27f21 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_183466.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1093 Score = 159 bits (80), Expect = 1e-35 Identities = 170/200 (85%) Strand = Plus / Minus Query: 323 tcaccaggcaacgatcttccagcgctggttgtcgccctcagtccactcccacagaatgag 382 |||||||| ||| |||||||||||||||||||| ||||| ||||||||| || | || Sbjct: 810 tcaccagggaacaatcttccagcgctggttgtcaccctcgcaccactcccagagcaccag 751 Query: 383 ggtggttccatcgcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaa 442 ||||||||| |||||||| ||||| ||||||||||| ||||||||||| || ||||| | Sbjct: 750 ggtggttccgtcgcgcacgccgccgtggtccttgtctccatggagcgcgtcgaagttgag 691 Query: 443 gtagatgttgttcaccatcctgatgcagcggtagcctgccccaacatccctgctctcggt 502 ||||||||||||||||||||||||||| || | || |||||| ||||||||||| || Sbjct: 690 gtagatgttgttcaccatcctgatgcaccgaaacccactcccaacgtccctgctctccgt 631 Query: 503 ccaaaggaccgactcgtcca 522 ||| || || |||||||||| Sbjct: 630 ccacagcacagactcgtcca 611
>dbj|AK104820.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-A11, full insert sequence Length = 1093 Score = 159 bits (80), Expect = 1e-35 Identities = 170/200 (85%) Strand = Plus / Minus Query: 323 tcaccaggcaacgatcttccagcgctggttgtcgccctcagtccactcccacagaatgag 382 |||||||| ||| |||||||||||||||||||| ||||| ||||||||| || | || Sbjct: 810 tcaccagggaacaatcttccagcgctggttgtcaccctcgcaccactcccagagcaccag 751 Query: 383 ggtggttccatcgcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaa 442 ||||||||| |||||||| ||||| ||||||||||| ||||||||||| || ||||| | Sbjct: 750 ggtggttccgtcgcgcacgccgccgtggtccttgtctccatggagcgcgtcgaagttgag 691 Query: 443 gtagatgttgttcaccatcctgatgcagcggtagcctgccccaacatccctgctctcggt 502 ||||||||||||||||||||||||||| || | || |||||| ||||||||||| || Sbjct: 690 gtagatgttgttcaccatcctgatgcaccgaaacccactcccaacgtccctgctctccgt 631 Query: 503 ccaaaggaccgactcgtcca 522 ||| || || |||||||||| Sbjct: 630 ccacagcacagactcgtcca 611
>dbj|AK104555.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-F10, full insert sequence Length = 1088 Score = 159 bits (80), Expect = 1e-35 Identities = 170/200 (85%) Strand = Plus / Minus Query: 323 tcaccaggcaacgatcttccagcgctggttgtcgccctcagtccactcccacagaatgag 382 |||||||| ||| |||||||||||||||||||| ||||| ||||||||| || | || Sbjct: 807 tcaccagggaacaatcttccagcgctggttgtcaccctcgcaccactcccagagcaccag 748 Query: 383 ggtggttccatcgcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaa 442 ||||||||| |||||||| ||||| ||||||||||| ||||||||||| || ||||| | Sbjct: 747 ggtggttccgtcgcgcacgccgccgtggtccttgtctccatggagcgcgtcgaagttgag 688 Query: 443 gtagatgttgttcaccatcctgatgcagcggtagcctgccccaacatccctgctctcggt 502 ||||||||||||||||||||||||||| || | || |||||| ||||||||||| || Sbjct: 687 gtagatgttgttcaccatcctgatgcaccgaaacccactcccaacgtccctgctctccgt 628 Query: 503 ccaaaggaccgactcgtcca 522 ||| || || |||||||||| Sbjct: 627 ccacagcacagactcgtcca 608
>dbj|AK071375.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095C18, full insert sequence Length = 1392 Score = 159 bits (80), Expect = 1e-35 Identities = 170/200 (85%) Strand = Plus / Minus Query: 323 tcaccaggcaacgatcttccagcgctggttgtcgccctcagtccactcccacagaatgag 382 |||||||| ||| |||||||||||||||||||| ||||| ||||||||| || | || Sbjct: 1093 tcaccagggaacaatcttccagcgctggttgtcaccctcgcaccactcccagagcaccag 1034 Query: 383 ggtggttccatcgcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaa 442 ||||||||| |||||||| ||||| ||||||||||| ||||||||||| || ||||| | Sbjct: 1033 ggtggttccgtcgcgcacgccgccgtggtccttgtctccatggagcgcgtcgaagttgag 974 Query: 443 gtagatgttgttcaccatcctgatgcagcggtagcctgccccaacatccctgctctcggt 502 ||||||||||||||||||||||||||| || | || |||||| ||||||||||| || Sbjct: 973 gtagatgttgttcaccatcctgatgcaccgaaacccactcccaacgtccctgctctccgt 914 Query: 503 ccaaaggaccgactcgtcca 522 ||| || || |||||||||| Sbjct: 913 ccacagcacagactcgtcca 894
>dbj|AK060132.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C04, full insert sequence Length = 1220 Score = 159 bits (80), Expect = 1e-35 Identities = 170/200 (85%) Strand = Plus / Minus Query: 323 tcaccaggcaacgatcttccagcgctggttgtcgccctcagtccactcccacagaatgag 382 |||||||| ||| |||||||||||||||||||| ||||| ||||||||| || | || Sbjct: 850 tcaccagggaacaatcttccagcgctggttgtcaccctcgcaccactcccagagcaccag 791 Query: 383 ggtggttccatcgcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaa 442 ||||||||| |||||||| ||||| ||||||||||| ||||||||||| || ||||| | Sbjct: 790 ggtggttccgtcgcgcacgccgccgtggtccttgtctccatggagcgcgtcgaagttgag 731 Query: 443 gtagatgttgttcaccatcctgatgcagcggtagcctgccccaacatccctgctctcggt 502 ||||||||||||||||||||||||||| || | || |||||| ||||||||||| || Sbjct: 730 gtagatgttgttcaccatcctgatgcaccgaaacccactcccaacgtccctgctctccgt 671 Query: 503 ccaaaggaccgactcgtcca 522 ||| || || |||||||||| Sbjct: 670 ccacagcacagactcgtcca 651
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 157 bits (79), Expect = 4e-35 Identities = 169/199 (84%) Strand = Plus / Minus Query: 324 caccaggcaacgatcttccagcgctggttgtcgccctcagtccactcccacagaatgagg 383 ||||||| ||| |||||||||||||||||||| ||||| ||||||||| || | ||| Sbjct: 227786 caccagggaacaatcttccagcgctggttgtcaccctcgcaccactcccagagcaccagg 227727 Query: 384 gtggttccatcgcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaag 443 |||||||| |||||||| ||||| ||||||||||| ||||||||||| || ||||| | | Sbjct: 227726 gtggttccgtcgcgcacgccgccgtggtccttgtctccatggagcgcgtcgaagttgagg 227667 Query: 444 tagatgttgttcaccatcctgatgcagcggtagcctgccccaacatccctgctctcggtc 503 |||||||||||||||||||||||||| || | || |||||| ||||||||||| ||| Sbjct: 227666 tagatgttgttcaccatcctgatgcaccgaaacccactcccaacgtccctgctctccgtc 227607 Query: 504 caaaggaccgactcgtcca 522 || || || |||||||||| Sbjct: 227606 cacagcacagactcgtcca 227588
>dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0436E04 Length = 144644 Score = 157 bits (79), Expect = 4e-35 Identities = 169/199 (84%) Strand = Plus / Minus Query: 324 caccaggcaacgatcttccagcgctggttgtcgccctcagtccactcccacagaatgagg 383 ||||||| ||| |||||||||||||||||||| ||||| ||||||||| || | ||| Sbjct: 69456 caccagggaacaatcttccagcgctggttgtcaccctcgcaccactcccagagcaccagg 69397 Query: 384 gtggttccatcgcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaag 443 |||||||| |||||||| ||||| ||||||||||| ||||||||||| || ||||| | | Sbjct: 69396 gtggttccgtcgcgcacgccgccgtggtccttgtctccatggagcgcgtcgaagttgagg 69337 Query: 444 tagatgttgttcaccatcctgatgcagcggtagcctgccccaacatccctgctctcggtc 503 |||||||||||||||||||||||||| || | || |||||| ||||||||||| ||| Sbjct: 69336 tagatgttgttcaccatcctgatgcaccgaaacccactcccaacgtccctgctctccgtc 69277 Query: 504 caaaggaccgactcgtcca 522 || || || |||||||||| Sbjct: 69276 cacagcacagactcgtcca 69258
>ref|XM_479570.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1209 Score = 123 bits (62), Expect = 6e-25 Identities = 158/190 (83%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatc 394 |||||||||||||||||||||||||| | ||||||||| || | || |||||| || || Sbjct: 1191 gatcttccagcgctggttgtcgcccttacaccactcccagagcacgacggtggtgccgtc 1132 Query: 395 gcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaagtagatgttgtt 454 | | || ||||| ||||||||||||||||||| || |||||||| | |||||||||||| Sbjct: 1131 gtggacgccgccgtggtccttgtcgccatggaaggcgtcaaagttgaggtagatgttgtt 1072 Query: 455 caccatcctgatgcagcggtagcctgccccaacatccctgctctcggtccaaaggaccga 514 |||||| | || ||||||| |||| || || ||| ||||||| ||||| || ||||| Sbjct: 1071 caccatgcggacgcagcggaagccatggccgacgtccttgctctccgtccacagcaccga 1012 Query: 515 ctcgtccagg 524 |||||||||| Sbjct: 1011 ctcgtccagg 1002 Score = 85.7 bits (43), Expect = 1e-13 Identities = 151/187 (80%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatc 394 ||||||||||| |||||||||||||| ||||||||| || | || |||||| || || Sbjct: 503 gatcttccagcactggttgtcgcccttgcaccactcccagagcacgacggtggtgccgtc 444 Query: 395 gcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaagtagatgttgtt 454 | |||| ||||| ||| ||||||||| |||| || || ||||| | |||||||||||| Sbjct: 443 gtgcacgccgccgtgggacttgtcgccgtggaaggcgtccaagttgaggtagatgttgtt 384 Query: 455 caccatcctgatgcagcggtagcctgccccaacatccctgctctcggtccaaaggaccga 514 ||||| | |||||||||| |||| || || ||| ||||||||||||| || ||||| Sbjct: 383 gaccatgcggatgcagcggaagccatggccgacgtccttgctctcggtccacagcaccga 324 Query: 515 ctcgtcc 521 ||||||| Sbjct: 323 ctcgtcc 317
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 123 bits (62), Expect = 6e-25 Identities = 158/190 (83%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatc 394 |||||||||||||||||||||||||| | ||||||||| || | || |||||| || || Sbjct: 28940894 gatcttccagcgctggttgtcgcccttacaccactcccagagcacgacggtggtgccgtc 28940835 Query: 395 gcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaagtagatgttgtt 454 | | || ||||| ||||||||||||||||||| || |||||||| | |||||||||||| Sbjct: 28940834 gtggacgccgccgtggtccttgtcgccatggaaggcgtcaaagttgaggtagatgttgtt 28940775 Query: 455 caccatcctgatgcagcggtagcctgccccaacatccctgctctcggtccaaaggaccga 514 |||||| | || ||||||| |||| || || ||| ||||||| ||||| || ||||| Sbjct: 28940774 caccatgcggacgcagcggaagccatggccgacgtccttgctctccgtccacagcaccga 28940715 Query: 515 ctcgtccagg 524 |||||||||| Sbjct: 28940714 ctcgtccagg 28940705 Score = 85.7 bits (43), Expect = 1e-13 Identities = 151/187 (80%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatc 394 ||||||||||| |||||||||||||| ||||||||| || | || |||||| || || Sbjct: 28939892 gatcttccagcactggttgtcgcccttgcaccactcccagagcacgacggtggtgccgtc 28939833 Query: 395 gcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaagtagatgttgtt 454 | |||| ||||| ||| ||||||||| |||| || || ||||| | |||||||||||| Sbjct: 28939832 gtgcacgccgccgtgggacttgtcgccgtggaaggcgtccaagttgaggtagatgttgtt 28939773 Query: 455 caccatcctgatgcagcggtagcctgccccaacatccctgctctcggtccaaaggaccga 514 ||||| | |||||||||| |||| || || ||| ||||||||||||| || ||||| Sbjct: 28939772 gaccatgcggatgcagcggaagccatggccgacgtccttgctctcggtccacagcaccga 28939713 Query: 515 ctcgtcc 521 ||||||| Sbjct: 28939712 ctcgtcc 28939706 Score = 77.8 bits (39), Expect = 3e-11 Identities = 150/187 (80%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatc 394 ||||||||||||||||||||| ||||| ||||| |||||| | || ||| ||||| Sbjct: 28952104 gatcttccagcgctggttgtcaccctcgcaccacttccacagcacgatctcggtgccatc 28952045 Query: 395 gcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaagtagatgttgtt 454 | | | ||||| || |||||||||||||||| || || ||||| | |||||||||||| Sbjct: 28952044 gtggatgccgccgtgatccttgtcgccatggaaggcgtcgaagttgaggtagatgttgtt 28951985 Query: 455 caccatcctgatgcagcggtagcctgccccaacatccctgctctcggtccaaaggaccga 514 |||||| | |||||||||| |||| || |||||| ||||||| ||||| || || || Sbjct: 28951984 caccatgcggatgcagcggaagcccttgcccacatccttgctctccgtccacagcacaga 28951925 Query: 515 ctcgtcc 521 ||||||| Sbjct: 28951924 ctcgtcc 28951918 Score = 69.9 bits (35), Expect = 8e-09 Identities = 110/135 (81%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatc 394 ||||||||||||||||||||||||||| ||||| ||| || | || | ||| || || Sbjct: 28956076 gatcttccagcgctggttgtcgccctcgcaccacttccagagcacgatgtcggtgccgtc 28956017 Query: 395 gcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaagtagatgttgtt 454 ||| || ||||| |||| ||||||||| |||| || || ||||| | |||||||||||| Sbjct: 28956016 gcggacgccgccgtggtacttgtcgccgtggaaggcgtcgaagttgaggtagatgttgtt 28955957 Query: 455 caccatcctgatgca 469 |||||| | |||||| Sbjct: 28955956 caccatgcggatgca 28955942 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatc 394 ||||||||||| |||||||||||||| ||||||||| || | || |||||| || || Sbjct: 28951417 gatcttccagctctggttgtcgcccttgcaccactcccagagcacgacggtggtgccgtc 28951358 Query: 395 gcgcacaccgccatggtccttgtcgccatgga 426 ||| || ||||| |||||||||||||| |||| Sbjct: 28951357 gcggacgccgccgtggtccttgtcgccgtgga 28951326
>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0060O17 Length = 180015 Score = 123 bits (62), Expect = 6e-25 Identities = 158/190 (83%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatc 394 |||||||||||||||||||||||||| | ||||||||| || | || |||||| || || Sbjct: 58431 gatcttccagcgctggttgtcgcccttacaccactcccagagcacgacggtggtgccgtc 58372 Query: 395 gcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaagtagatgttgtt 454 | | || ||||| ||||||||||||||||||| || |||||||| | |||||||||||| Sbjct: 58371 gtggacgccgccgtggtccttgtcgccatggaaggcgtcaaagttgaggtagatgttgtt 58312 Query: 455 caccatcctgatgcagcggtagcctgccccaacatccctgctctcggtccaaaggaccga 514 |||||| | || ||||||| |||| || || ||| ||||||| ||||| || ||||| Sbjct: 58311 caccatgcggacgcagcggaagccatggccgacgtccttgctctccgtccacagcaccga 58252 Query: 515 ctcgtccagg 524 |||||||||| Sbjct: 58251 ctcgtccagg 58242 Score = 85.7 bits (43), Expect = 1e-13 Identities = 151/187 (80%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatc 394 ||||||||||| |||||||||||||| ||||||||| || | || |||||| || || Sbjct: 57429 gatcttccagcactggttgtcgcccttgcaccactcccagagcacgacggtggtgccgtc 57370 Query: 395 gcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaagtagatgttgtt 454 | |||| ||||| ||| ||||||||| |||| || || ||||| | |||||||||||| Sbjct: 57369 gtgcacgccgccgtgggacttgtcgccgtggaaggcgtccaagttgaggtagatgttgtt 57310 Query: 455 caccatcctgatgcagcggtagcctgccccaacatccctgctctcggtccaaaggaccga 514 ||||| | |||||||||| |||| || || ||| ||||||||||||| || ||||| Sbjct: 57309 gaccatgcggatgcagcggaagccatggccgacgtccttgctctcggtccacagcaccga 57250 Query: 515 ctcgtcc 521 ||||||| Sbjct: 57249 ctcgtcc 57243 Score = 77.8 bits (39), Expect = 3e-11 Identities = 150/187 (80%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatc 394 ||||||||||||||||||||| ||||| ||||| |||||| | || ||| ||||| Sbjct: 69641 gatcttccagcgctggttgtcaccctcgcaccacttccacagcacgatctcggtgccatc 69582 Query: 395 gcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaagtagatgttgtt 454 | | | ||||| || |||||||||||||||| || || ||||| | |||||||||||| Sbjct: 69581 gtggatgccgccgtgatccttgtcgccatggaaggcgtcgaagttgaggtagatgttgtt 69522 Query: 455 caccatcctgatgcagcggtagcctgccccaacatccctgctctcggtccaaaggaccga 514 |||||| | |||||||||| |||| || |||||| ||||||| ||||| || || || Sbjct: 69521 caccatgcggatgcagcggaagcccttgcccacatccttgctctccgtccacagcacaga 69462 Query: 515 ctcgtcc 521 ||||||| Sbjct: 69461 ctcgtcc 69455 Score = 69.9 bits (35), Expect = 8e-09 Identities = 110/135 (81%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatc 394 ||||||||||||||||||||||||||| ||||| ||| || | || | ||| || || Sbjct: 73613 gatcttccagcgctggttgtcgccctcgcaccacttccagagcacgatgtcggtgccgtc 73554 Query: 395 gcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaagtagatgttgtt 454 ||| || ||||| |||| ||||||||| |||| || || ||||| | |||||||||||| Sbjct: 73553 gcggacgccgccgtggtacttgtcgccgtggaaggcgtcgaagttgaggtagatgttgtt 73494 Query: 455 caccatcctgatgca 469 |||||| | |||||| Sbjct: 73493 caccatgcggatgca 73479 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatc 394 ||||||||||| |||||||||||||| ||||||||| || | || |||||| || || Sbjct: 68954 gatcttccagctctggttgtcgcccttgcaccactcccagagcacgacggtggtgccgtc 68895 Query: 395 gcgcacaccgccatggtccttgtcgccatgga 426 ||| || ||||| |||||||||||||| |||| Sbjct: 68894 gcggacgccgccgtggtccttgtcgccgtgga 68863
>ref|NM_187532.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1122 Score = 115 bits (58), Expect = 2e-22 Identities = 163/198 (82%) Strand = Plus / Minus Query: 324 caccaggcaacgatcttccagcgctggttgtcgccctcagtccactcccacagaatgagg 383 ||||||| ||||||||||||||||||||||||||||| ||||| ||| || || | Sbjct: 1046 caccaggggacgatcttccagcgctggttgtcgccctcgcaccacttccagagcgcgacg 987 Query: 384 gtggttccatcgcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaag 443 ||||| || ||||| || ||||| |||||||||||||| ||||| || || ||||| | | Sbjct: 986 gtggtgccgtcgcggacgccgccgtggtccttgtcgccgtggagggcgtcgaagttgagg 927 Query: 444 tagatgttgttcaccatcctgatgcagcggtagcctgccccaacatccctgctctcggtc 503 ||||||||||||||||| | |||||||||| |||| ||| || || | |||||| ||| Sbjct: 926 tagatgttgttcaccatgcggatgcagcggaagccgtgcccgacgtcgcggctctccgtc 867 Query: 504 caaaggaccgactcgtcc 521 || || |||||||||||| Sbjct: 866 cacagcaccgactcgtcc 849 Score = 85.7 bits (43), Expect = 1e-13 Identities = 115/139 (82%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatc 394 ||||||||||| |||||||||||||| | ||||||||| || | || |||||| || || Sbjct: 528 gatcttccagcactggttgtcgcccttggcccactcccagagcacgatggtggtgccgtc 469 Query: 395 gcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaagtagatgttgtt 454 | |||| ||||| |||||||||||||| |||| ||| || ||||| | | ||||||||| Sbjct: 468 gtgcacgccgccgtggtccttgtcgccgtggaacgcgtcgaagttgaggcggatgttgtt 409 Query: 455 caccatcctgatgcagcgg 473 || ||| | |||||||||| Sbjct: 408 cagcatgcggatgcagcgg 390
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 115 bits (58), Expect = 2e-22 Identities = 163/198 (82%) Strand = Plus / Plus Query: 324 caccaggcaacgatcttccagcgctggttgtcgccctcagtccactcccacagaatgagg 383 ||||||| ||||||||||||||||||||||||||||| ||||| ||| || || | Sbjct: 11931353 caccaggggacgatcttccagcgctggttgtcgccctcgcaccacttccagagcgcgacg 11931412 Query: 384 gtggttccatcgcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaag 443 ||||| || ||||| || ||||| |||||||||||||| ||||| || || ||||| | | Sbjct: 11931413 gtggtgccgtcgcggacgccgccgtggtccttgtcgccgtggagggcgtcgaagttgagg 11931472 Query: 444 tagatgttgttcaccatcctgatgcagcggtagcctgccccaacatccctgctctcggtc 503 ||||||||||||||||| | |||||||||| |||| ||| || || | |||||| ||| Sbjct: 11931473 tagatgttgttcaccatgcggatgcagcggaagccgtgcccgacgtcgcggctctccgtc 11931532 Query: 504 caaaggaccgactcgtcc 521 || || |||||||||||| Sbjct: 11931533 cacagcaccgactcgtcc 11931550 Score = 85.7 bits (43), Expect = 1e-13 Identities = 115/139 (82%) Strand = Plus / Plus Query: 335 gatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatc 394 ||||||||||| |||||||||||||| | ||||||||| || | || |||||| || || Sbjct: 11931980 gatcttccagcactggttgtcgcccttggcccactcccagagcacgatggtggtgccgtc 11932039 Query: 395 gcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaagtagatgttgtt 454 | |||| ||||| |||||||||||||| |||| ||| || ||||| | | ||||||||| Sbjct: 11932040 gtgcacgccgccgtggtccttgtcgccgtggaacgcgtcgaagttgaggcggatgttgtt 11932099 Query: 455 caccatcctgatgcagcgg 473 || ||| | |||||||||| Sbjct: 11932100 cagcatgcggatgcagcgg 11932118 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 498 tcggtccaaaggaccgactcgtccag 523 |||||||| ||||||||||||||||| Sbjct: 11854088 tcggtccacaggaccgactcgtccag 11854063
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 115 bits (58), Expect = 2e-22 Identities = 163/198 (82%) Strand = Plus / Plus Query: 324 caccaggcaacgatcttccagcgctggttgtcgccctcagtccactcccacagaatgagg 383 ||||||| ||||||||||||||||||||||||||||| ||||| ||| || || | Sbjct: 11928116 caccaggggacgatcttccagcgctggttgtcgccctcgcaccacttccagagcgcgacg 11928175 Query: 384 gtggttccatcgcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaag 443 ||||| || ||||| || ||||| |||||||||||||| ||||| || || ||||| | | Sbjct: 11928176 gtggtgccgtcgcggacgccgccgtggtccttgtcgccgtggagggcgtcgaagttgagg 11928235 Query: 444 tagatgttgttcaccatcctgatgcagcggtagcctgccccaacatccctgctctcggtc 503 ||||||||||||||||| | |||||||||| |||| ||| || || | |||||| ||| Sbjct: 11928236 tagatgttgttcaccatgcggatgcagcggaagccgtgcccgacgtcgcggctctccgtc 11928295 Query: 504 caaaggaccgactcgtcc 521 || || |||||||||||| Sbjct: 11928296 cacagcaccgactcgtcc 11928313 Score = 85.7 bits (43), Expect = 1e-13 Identities = 115/139 (82%) Strand = Plus / Plus Query: 335 gatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatc 394 ||||||||||| |||||||||||||| | ||||||||| || | || |||||| || || Sbjct: 11928743 gatcttccagcactggttgtcgcccttggcccactcccagagcacgatggtggtgccgtc 11928802 Query: 395 gcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaagtagatgttgtt 454 | |||| ||||| |||||||||||||| |||| ||| || ||||| | | ||||||||| Sbjct: 11928803 gtgcacgccgccgtggtccttgtcgccgtggaacgcgtcgaagttgaggcggatgttgtt 11928862 Query: 455 caccatcctgatgcagcgg 473 || ||| | |||||||||| Sbjct: 11928863 cagcatgcggatgcagcgg 11928881 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 498 tcggtccaaaggaccgactcgtccag 523 |||||||| ||||||||||||||||| Sbjct: 11850851 tcggtccacaggaccgactcgtccag 11850826
>gb|AC126222.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0014I10, complete sequence Length = 113946 Score = 115 bits (58), Expect = 2e-22 Identities = 163/198 (82%) Strand = Plus / Plus Query: 324 caccaggcaacgatcttccagcgctggttgtcgccctcagtccactcccacagaatgagg 383 ||||||| ||||||||||||||||||||||||||||| ||||| ||| || || | Sbjct: 32615 caccaggggacgatcttccagcgctggttgtcgccctcgcaccacttccagagcgcgacg 32674 Query: 384 gtggttccatcgcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaag 443 ||||| || ||||| || ||||| |||||||||||||| ||||| || || ||||| | | Sbjct: 32675 gtggtgccgtcgcggacgccgccgtggtccttgtcgccgtggagggcgtcgaagttgagg 32734 Query: 444 tagatgttgttcaccatcctgatgcagcggtagcctgccccaacatccctgctctcggtc 503 ||||||||||||||||| | |||||||||| |||| ||| || || | |||||| ||| Sbjct: 32735 tagatgttgttcaccatgcggatgcagcggaagccgtgcccgacgtcgcggctctccgtc 32794 Query: 504 caaaggaccgactcgtcc 521 || || |||||||||||| Sbjct: 32795 cacagcaccgactcgtcc 32812 Score = 85.7 bits (43), Expect = 1e-13 Identities = 115/139 (82%) Strand = Plus / Plus Query: 335 gatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatc 394 ||||||||||| |||||||||||||| | ||||||||| || | || |||||| || || Sbjct: 33242 gatcttccagcactggttgtcgcccttggcccactcccagagcacgatggtggtgccgtc 33301 Query: 395 gcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaagtagatgttgtt 454 | |||| ||||| |||||||||||||| |||| ||| || ||||| | | ||||||||| Sbjct: 33302 gtgcacgccgccgtggtccttgtcgccgtggaacgcgtcgaagttgaggcggatgttgtt 33361 Query: 455 caccatcctgatgcagcgg 473 || ||| | |||||||||| Sbjct: 33362 cagcatgcggatgcagcgg 33380
>emb|X95402.1|OSOSR40C1 O.sativa mRNA for novel protein, osr40c1 Length = 1458 Score = 113 bits (57), Expect = 6e-22 Identities = 156/189 (82%) Strand = Plus / Minus Query: 333 acgatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttcca 392 ||||||||||||||||||||||||||||| ||||| ||| || || |||||| || Sbjct: 1099 acgatcttccagcgctggttgtcgccctcgcaccacttccagagcgcgacggtggtgccg 1040 Query: 393 tcgcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaagtagatgttg 452 ||||| || ||||| |||||||||||||| ||||| || || ||||| | |||||||||| Sbjct: 1039 tcgcggacgccgccgtggtccttgtcgccgtggagggcgtcgaagttgaggtagatgttg 980 Query: 453 ttcaccatcctgatgcagcggtagcctgccccaacatccctgctctcggtccaaaggacc 512 |||||||| | |||||||||| |||| ||| || || | |||||| ||||| || ||| Sbjct: 979 ttcaccatgcggatgcagcggaagccgtgcccgacgtcgcggctctccgtccacagcacc 920 Query: 513 gactcgtcc 521 ||||||||| Sbjct: 919 gactcgtcc 911 Score = 77.8 bits (39), Expect = 3e-11 Identities = 114/139 (82%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatc 394 ||||||||||| |||||||||||||| | ||||||||| || | || |||||| || || Sbjct: 590 gatcttccagcactggttgtcgcccttggcccactcccagagcacgatggtggtgccgtc 531 Query: 395 gcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaagtagatgttgtt 454 | |||| ||||| |||||||||||||| |||| ||| || ||||| | | ||||||||| Sbjct: 530 gtgcacgccgccgtggtccttgtcgccgtggaacgcgtcgaagttgaggcggatgttgtt 471 Query: 455 caccatcctgatgcagcgg 473 || ||| | ||||||||| Sbjct: 470 cagcatgcgaatgcagcgg 452
>dbj|AK069815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031K10, full insert sequence Length = 1765 Score = 113 bits (57), Expect = 6e-22 Identities = 156/189 (82%) Strand = Plus / Minus Query: 333 acgatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttcca 392 ||||||||||||||||||||||||||||| ||||| ||| || || |||||| || Sbjct: 1112 acgatcttccagcgctggttgtcgccctcgcaccacttccagagcgcgacggtggtgccg 1053 Query: 393 tcgcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaagtagatgttg 452 ||||| || ||||| |||||||||||||| ||||| || || ||||| | |||||||||| Sbjct: 1052 tcgcggacgccgccgtggtccttgtcgccgtggagggcgtcgaagttgaggtagatgttg 993 Query: 453 ttcaccatcctgatgcagcggtagcctgccccaacatccctgctctcggtccaaaggacc 512 |||||||| | |||||||||| |||| ||| || || | |||||| ||||| || ||| Sbjct: 992 ttcaccatgcggatgcagcggaagccgtgcccgacgtcgcggctctccgtccacagcacc 933 Query: 513 gactcgtcc 521 ||||||||| Sbjct: 932 gactcgtcc 924 Score = 85.7 bits (43), Expect = 1e-13 Identities = 115/139 (82%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatc 394 ||||||||||| |||||||||||||| | ||||||||| || | || |||||| || || Sbjct: 603 gatcttccagcactggttgtcgcccttggcccactcccagagcacgatggtggtgccgtc 544 Query: 395 gcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaagtagatgttgtt 454 | |||| ||||| |||||||||||||| |||| ||| || ||||| | | ||||||||| Sbjct: 543 gtgcacgccgccgtggtccttgtcgccgtggaacgcgtcgaagttgaggcggatgttgtt 484 Query: 455 caccatcctgatgcagcgg 473 || ||| | |||||||||| Sbjct: 483 cagcatgcggatgcagcgg 465
>gb|BT016654.1| Zea mays clone Contig487 mRNA sequence Length = 905 Score = 91.7 bits (46), Expect = 2e-15 Identities = 121/146 (82%) Strand = Plus / Minus Query: 333 acgatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttcca 392 ||||||||||||||||||||||||||||| ||||| ||| || | || | |||| || Sbjct: 549 acgatcttccagcgctggttgtcgccctcgcaccacttccagagcacgatgttggtgccg 490 Query: 393 tcgcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaagtagatgttg 452 |||||||| ||||| |||||||||||||| |||| || || ||||| | |||||||||| Sbjct: 489 tcgcgcacgccgccgtggtccttgtcgccgtggaaggcgtcgaagttgaggtagatgttg 430 Query: 453 ttcaccatcctgatgcagcggtagcc 478 || ||||| | || ||||||| |||| Sbjct: 429 ttgaccatgcggacgcagcggaagcc 404
>gb|BT017376.1| Zea mays clone EL01N0325G07.c mRNA sequence Length = 778 Score = 79.8 bits (40), Expect = 8e-12 Identities = 118/144 (81%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatc 394 ||||||||||| |||||||||||||| | |||||||||||| | | |||||| || || Sbjct: 682 gatcttccagctctggttgtcgcccttggcccactcccacagcaccacggtggtgccgtc 623 Query: 395 gcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaagtagatgttgtt 454 | |||| ||||| ||| |||||||||| |||| || || ||||| | | ||||||||| Sbjct: 622 gtgcacgccgccgtggcccttgtcgccgtggaaggcgtcgaagttgaggcggatgttgtt 563 Query: 455 caccatcctgatgcagcggtagcc 478 |||||| | |||||||||| |||| Sbjct: 562 caccatgcggatgcagcggaagcc 539
>ref|XM_479572.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1239 Score = 77.8 bits (39), Expect = 3e-11 Identities = 150/187 (80%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatc 394 ||||||||||||||||||||| ||||| ||||| |||||| | || ||| ||||| Sbjct: 885 gatcttccagcgctggttgtcaccctcgcaccacttccacagcacgatctcggtgccatc 826 Query: 395 gcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaagtagatgttgtt 454 | | | ||||| || |||||||||||||||| || || ||||| | |||||||||||| Sbjct: 825 gtggatgccgccgtgatccttgtcgccatggaaggcgtcgaagttgaggtagatgttgtt 766 Query: 455 caccatcctgatgcagcggtagcctgccccaacatccctgctctcggtccaaaggaccga 514 |||||| | |||||||||| |||| || |||||| ||||||| ||||| || || || Sbjct: 765 caccatgcggatgcagcggaagcccttgcccacatccttgctctccgtccacagcacaga 706 Query: 515 ctcgtcc 521 ||||||| Sbjct: 705 ctcgtcc 699 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatc 394 ||||||||||| |||||||||||||| ||||||||| || | || |||||| || || Sbjct: 366 gatcttccagctctggttgtcgcccttgcaccactcccagagcacgacggtggtgccgtc 307 Query: 395 gcgcacaccgccatggtccttgtcgccatgga 426 ||| || ||||| |||||||||||||| |||| Sbjct: 306 gcggacgccgccgtggtccttgtcgccgtgga 275
>ref|XM_479571.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1511 Score = 77.8 bits (39), Expect = 3e-11 Identities = 150/187 (80%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatc 394 ||||||||||||||||||||| ||||| ||||| |||||| | || ||| ||||| Sbjct: 1100 gatcttccagcgctggttgtcaccctcgcaccacttccacagcacgatctcggtgccatc 1041 Query: 395 gcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaagtagatgttgtt 454 | | | ||||| || |||||||||||||||| || || ||||| | |||||||||||| Sbjct: 1040 gtggatgccgccgtgatccttgtcgccatggaaggcgtcgaagttgaggtagatgttgtt 981 Query: 455 caccatcctgatgcagcggtagcctgccccaacatccctgctctcggtccaaaggaccga 514 |||||| | |||||||||| |||| || |||||| ||||||| ||||| || || || Sbjct: 980 caccatgcggatgcagcggaagcccttgcccacatccttgctctccgtccacagcacaga 921 Query: 515 ctcgtcc 521 ||||||| Sbjct: 920 ctcgtcc 914 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatc 394 ||||||||||| |||||||||||||| ||||||||| || | || |||||| || || Sbjct: 581 gatcttccagctctggttgtcgcccttgcaccactcccagagcacgacggtggtgccgtc 522 Query: 395 gcgcacaccgccatggtccttgtcgccatgga 426 ||| || ||||| |||||||||||||| |||| Sbjct: 521 gcggacgccgccgtggtccttgtcgccgtgga 490
>dbj|AK103324.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125K07, full insert sequence Length = 1512 Score = 77.8 bits (39), Expect = 3e-11 Identities = 150/187 (80%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatc 394 ||||||||||||||||||||| ||||| ||||| |||||| | || ||| ||||| Sbjct: 1100 gatcttccagcgctggttgtcaccctcgcaccacttccacagcacgatctcggtgccatc 1041 Query: 395 gcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaagtagatgttgtt 454 | | | ||||| || |||||||||||||||| || || ||||| | |||||||||||| Sbjct: 1040 gtggatgccgccgtgatccttgtcgccatggaaggcgtcgaagttgaggtagatgttgtt 981 Query: 455 caccatcctgatgcagcggtagcctgccccaacatccctgctctcggtccaaaggaccga 514 |||||| | |||||||||| |||| || |||||| ||||||| ||||| || || || Sbjct: 980 caccatgcggatgcagcggaagcccttgcccacatccttgctctccgtccacagcacaga 921 Query: 515 ctcgtcc 521 ||||||| Sbjct: 920 ctcgtcc 914 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatc 394 ||||||||||| |||||||||||||| ||||||||| || | || |||||| || || Sbjct: 581 gatcttccagctctggttgtcgcccttgcaccactcccagagcacgacggtggtgccgtc 522 Query: 395 gcgcacaccgccatggtccttgtcgccatgga 426 ||| || ||||| |||||||||||||| |||| Sbjct: 521 gcggacgccgccgtggtccttgtcgccgtgga 490
>dbj|AK060899.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D04, full insert sequence Length = 1239 Score = 77.8 bits (39), Expect = 3e-11 Identities = 150/187 (80%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatc 394 ||||||||||||||||||||| ||||| ||||| |||||| | || ||| ||||| Sbjct: 885 gatcttccagcgctggttgtcaccctcgcaccacttccacagcacgatctcggtgccatc 826 Query: 395 gcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaagtagatgttgtt 454 | | | ||||| || |||||||||||||||| || || ||||| | |||||||||||| Sbjct: 825 gtggatgccgccgtgatccttgtcgccatggaaggcgtcgaagttgaggtagatgttgtt 766 Query: 455 caccatcctgatgcagcggtagcctgccccaacatccctgctctcggtccaaaggaccga 514 |||||| | |||||||||| |||| || |||||| ||||||| ||||| || || || Sbjct: 765 caccatgcggatgcagcggaagcccttgcccacatccttgctctccgtccacagcacaga 706 Query: 515 ctcgtcc 521 ||||||| Sbjct: 705 ctcgtcc 699 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatc 394 ||||||||||| |||||||||||||| ||||||||| || | || |||||| || || Sbjct: 366 gatcttccagctctggttgtcgcccttgcaccactcccagagcacgacggtggtgccgtc 307 Query: 395 gcgcacaccgccatggtccttgtcgccatgga 426 ||| || ||||| |||||||||||||| |||| Sbjct: 306 gcggacgccgccgtggtccttgtcgccgtgga 275
>emb|Y08987.1|OSR40G2 O.sativa osr40g2 gene Length = 2101 Score = 71.9 bits (36), Expect = 2e-09 Identities = 117/144 (81%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatc 394 ||||||||||||||||||||| ||||| ||||| |||||| | || ||| ||||| Sbjct: 2031 gatcttccagcgctggttgtcaccctcgcaccacttccacagcacgatctcggtgccatc 1972 Query: 395 gcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaagtagatgttgtt 454 | | | ||||| || |||||||||||||||| || || ||||| | |||||||||||| Sbjct: 1971 gtggatgccgccgtgatccttgtcgccatggaaggcgtcgaagttgaggtagatgttgtt 1912 Query: 455 caccatcctgatgcagcggtagcc 478 |||||| | |||||||||| |||| Sbjct: 1911 caccatgcggatgcagcggaagcc 1888 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatc 394 ||||||||||| |||||||||||||| ||||||||| || | || |||||| || || Sbjct: 1344 gatcttccagctctggttgtcgcccttgcaccactcccagagcacgacggtggtgccgtc 1285 Query: 395 gcgcacaccgccatggtccttgtcgccatgga 426 ||| || ||||| |||||||||||||| |||| Sbjct: 1284 gcggacgccgccgtggtccttgtcgccgtgga 1253
>ref|XM_479573.1| Oryza sativa (japonica cultivar-group), mRNA Length = 988 Score = 69.9 bits (35), Expect = 8e-09 Identities = 110/135 (81%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatc 394 ||||||||||||||||||||||||||| ||||| ||| || | || | ||| || || Sbjct: 699 gatcttccagcgctggttgtcgccctcgcaccacttccagagcacgatgtcggtgccgtc 640 Query: 395 gcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaagtagatgttgtt 454 ||| || ||||| |||| ||||||||| |||| || || ||||| | |||||||||||| Sbjct: 639 gcggacgccgccgtggtacttgtcgccgtggaaggcgtcgaagttgaggtagatgttgtt 580 Query: 455 caccatcctgatgca 469 |||||| | |||||| Sbjct: 579 caccatgcggatgca 565
>emb|Y08988.1|OSR40G3 O.sativa osr40g3 gene Length = 1531 Score = 69.9 bits (35), Expect = 8e-09 Identities = 110/135 (81%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatc 394 ||||||||||||||||||||||||||| ||||| ||| || | || | ||| || || Sbjct: 1316 gatcttccagcgctggttgtcgccctcgcaccacttccagagcacgatgtcggtgccgtc 1257 Query: 395 gcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaagtagatgttgtt 454 ||| || ||||| |||| ||||||||| |||| || || ||||| | |||||||||||| Sbjct: 1256 gcggacgccgccgtggtacttgtcgccgtggaaggcgtcgaagttgaggtagatgttgtt 1197 Query: 455 caccatcctgatgca 469 |||||| | |||||| Sbjct: 1196 caccatgcggatgca 1182
>dbj|AK072989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145K15, full insert sequence Length = 987 Score = 69.9 bits (35), Expect = 8e-09 Identities = 110/135 (81%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatc 394 ||||||||||||||||||||||||||| ||||| ||| || | || | ||| || || Sbjct: 698 gatcttccagcgctggttgtcgccctcgcaccacttccagagcacgatgtcggtgccgtc 639 Query: 395 gcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaagtagatgttgtt 454 ||| || ||||| |||| ||||||||| |||| || || ||||| | |||||||||||| Sbjct: 638 gcggacgccgccgtggtacttgtcgccgtggaaggcgtcgaagttgaggtagatgttgtt 579 Query: 455 caccatcctgatgca 469 |||||| | |||||| Sbjct: 578 caccatgcggatgca 564
>gb|BT017211.1| Zea mays clone EL01N0372B08.c mRNA sequence Length = 567 Score = 67.9 bits (34), Expect = 3e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 333 acgatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttcca 392 ||||||||||||||||||||||||||||| ||||| ||| || | || | ||| || Sbjct: 233 acgatcttccagcgctggttgtcgccctcgcaccacttccagagcacgatgttggggccg 174 Query: 393 tcgcgcacaccgccatggtccttgtcgccatgga 426 |||||||| ||||| |||||||||||||| |||| Sbjct: 173 tcgcgcacgccgccgtggtccttgtcgccgtgga 140
>gb|DQ022951.1| Triticum aestivum stress responsive protein mRNA, complete cds Length = 846 Score = 61.9 bits (31), Expect = 2e-06 Identities = 100/123 (81%) Strand = Plus / Minus Query: 338 cttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatcgcg 397 |||||||||||||||||||||||| ||||| ||| || | || ||| || ||||| Sbjct: 592 cttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtcgcg 533 Query: 398 cacaccgccatggtccttgtcgccatggagcgcatcaaagttcaagtagatgttgttcac 457 ||| ||||| |||| ||||||||| | ||| || || ||||| | ||||||||||||||| Sbjct: 532 cacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgttcac 473 Query: 458 cat 460 ||| Sbjct: 472 cat 470 Score = 48.1 bits (24), Expect = 0.030 Identities = 33/36 (91%) Strand = Plus / Minus Query: 489 tccctgctctcggtccaaaggaccgactcgtccagg 524 ||||||||||| ||||| || ||||||||||||||| Sbjct: 441 tccctgctctccgtccacagcaccgactcgtccagg 406
>gb|BT016442.1| Zea mays clone Contig275 mRNA sequence Length = 1443 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatc 394 ||||||||||| |||||||||||||| ||||||||| || | || || ||| || || Sbjct: 559 gatcttccagctctggttgtcgcccttgcaccactcccagagcacgacggcggtgccgtc 500 Query: 395 gcgcacaccgccatggtccttgtcgccatgga 426 | |||| ||||| |||||||||||||| |||| Sbjct: 499 gtgcacgccgccgtggtccttgtcgccgtgga 468 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgccctc 361 ||||||||||||||||||||||||||| Sbjct: 1057 gatcttccagcgctggttgtcgccctc 1031 Score = 42.1 bits (21), Expect = 1.8 Identities = 63/77 (81%) Strand = Plus / Minus Query: 402 ccgccatggtccttgtcgccatggagcgcatcaaagttcaagtagatgttgttcaccatc 461 ||||| ||| |||||||||| |||| || || ||||| | |||||||||||| ||||| Sbjct: 990 ccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggtagatgttgttgaccatg 931 Query: 462 ctgatgcagcggtagcc 478 | || ||||||| |||| Sbjct: 930 cggacgcagcggaagcc 914
>gb|BT018086.1| Zea mays clone EL01N0552C09.c mRNA sequence Length = 666 Score = 56.0 bits (28), Expect = 1e-04 Identities = 115/144 (79%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgccctcagtccactcccacagaatgagggtggttccatc 394 ||||||||||||||||||||||||||| ||||| ||| || | || | |||| || || Sbjct: 424 gatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacgttggtgccgtc 365 Query: 395 gcgcacaccgccatggtccttgtcgccatggagcgcatcaaagttcaagtagatgttgtt 454 || || ||||| || ||||||||| ||||| || || ||||| | |||||||||||| Sbjct: 364 acggacgccgccgtgccacttgtcgccgtggagggcgtcgaagttgaggtagatgttgtt 305 Query: 455 caccatcctgatgcagcggtagcc 478 ||||| | || ||||||| |||| Sbjct: 304 gaccatgcggacgcagcggaagcc 281
>gb|BT018342.1| Zea mays clone EL01T0403C03.c mRNA sequence Length = 690 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgccctc 361 ||||||||||||||||||||||||||| Sbjct: 309 gatcttccagcgctggttgtcgccctc 283
>gb|BT018000.1| Zea mays clone EL01N0526G03.c mRNA sequence Length = 842 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgccctc 361 ||||||||||||||||||||||||||| Sbjct: 491 gatcttccagcgctggttgtcgccctc 465 Score = 42.1 bits (21), Expect = 1.8 Identities = 63/77 (81%) Strand = Plus / Minus Query: 402 ccgccatggtccttgtcgccatggagcgcatcaaagttcaagtagatgttgttcaccatc 461 ||||| ||| |||||||||| |||| || || ||||| | |||||||||||| ||||| Sbjct: 424 ccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggtagatgttgttgaccatg 365 Query: 462 ctgatgcagcggtagcc 478 | || ||||||| |||| Sbjct: 364 cggacgcagcggaagcc 348
>gb|DQ083207.1| Oryza sativa (indica cultivar-group) clone 6S8A23 mRNA sequence Length = 332 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 333 acgatcttccagcgctggttgtcgcc 358 |||||||||||||||||||||||||| Sbjct: 26 acgatcttccagcgctggttgtcgcc 1
>gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold Length = 1743090 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 83 atgtatatatatatgcataataac 106 |||||||||||||||||||||||| Sbjct: 1572054 atgtatatatatatgcataataac 1572031
>gb|AC146532.3| Otolemur garnettii clone CH256-151F13, complete sequence Length = 197659 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 83 atgtatatatatatgcataataac 106 |||||||||||||||||||||||| Sbjct: 26623 atgtatatatatatgcataataac 26600
>dbj|AP007256.1| Danio rerio DNA, clone:DKEY-188F22, complete sequence Length = 155274 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 477 cctgccccaacatccctgctctc 499 ||||||||||||||||||||||| Sbjct: 86442 cctgccccaacatccctgctctc 86420
>gb|AY815769.1| Schistosoma japonicum SJCHGC01083 protein mRNA, complete cds Length = 1358 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 86 tatatatatatgcataataaca 107 |||||||||||||||||||||| Sbjct: 1324 tatatatatatgcataataaca 1345
>gb|AC007152.9| Arabidopsis thaliana chromosome I BAC F1O19 genomic sequence, complete sequence Length = 90387 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 84 tgtatatatatatgcataataacaag 109 |||||||||||||||||| ||||||| Sbjct: 65555 tgtatatatatatgcatactaacaag 65530
>gb|AC137070.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0035J18, from chromsome 3, complete sequence Length = 162711 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 498 tcggtccaaaggaccgactcgtccag 523 |||||||| ||||||||||||||||| Sbjct: 56565 tcggtccacaggaccgactcgtccag 56590
>emb|AL732322.10| Mouse DNA sequence from clone RP23-234H9 on chromosome X, complete sequence Length = 114453 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 83 atgtatatatatatgcataata 104 |||||||||||||||||||||| Sbjct: 67628 atgtatatatatatgcataata 67649
>gb|AC129319.4| Mus musculus BAC clone RP24-127J16 from chromosome 8, complete sequence Length = 169835 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 gcatgtatatatatatgcata 101 ||||||||||||||||||||| Sbjct: 36466 gcatgtatatatatatgcata 36486
>gb|AC162282.6| Mus musculus chromosome 8, clone RP23-154H18, complete sequence Length = 217566 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 gcatgtatatatatatgcata 101 ||||||||||||||||||||| Sbjct: 508 gcatgtatatatatatgcata 488
>emb|BX571723.7| Zebrafish DNA sequence from clone DKEYP-51D5 in linkage group 17, complete sequence Length = 201159 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 81 gcatgtatatatatatgcataataa 105 |||||||| |||||||||||||||| Sbjct: 88223 gcatgtatttatatatgcataataa 88247
>gb|AC087516.12| Homo sapiens chromosome 15, clone RP11-475A13, complete sequence Length = 187299 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 gcatgtatatatatatgcata 101 ||||||||||||||||||||| Sbjct: 7706 gcatgtatatatatatgcata 7686
>gb|AC103988.7| Homo sapiens chromosome 15, clone RP11-618N24, complete sequence Length = 192400 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 gcatgtatatatatatgcata 101 ||||||||||||||||||||| Sbjct: 49311 gcatgtatatatatatgcata 49331
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 418 cgccatggagcgcatcaaagt 438 ||||||||||||||||||||| Sbjct: 3551481 cgccatggagcgcatcaaagt 3551461
>dbj|AK132639.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4833441J21 product:hypothetical Immunoglobulin-like/Immunoglobulin subtype/Immunoglobulin V-type/Ig-like domain profile containing protein, full insert sequence Length = 1298 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 tcacaaacatgtcacatggca 83 ||||||||||||||||||||| Sbjct: 817 tcacaaacatgtcacatggca 837
>gb|AC021180.6| Homo sapiens BAC clone RP11-727M10 from 4, complete sequence Length = 173940 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 gcatgtatatatatatgcata 101 ||||||||||||||||||||| Sbjct: 158323 gcatgtatatatatatgcata 158303
>gb|AC102625.8| Mus musculus chromosome 8, clone RP23-453E3, complete sequence Length = 167288 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 gcatgtatatatatatgcata 101 ||||||||||||||||||||| Sbjct: 121990 gcatgtatatatatatgcata 122010
>ref|XM_393548.2| PREDICTED: Apis mellifera similar to CG33249-PA (LOC410061), mRNA Length = 4535 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 atgtatatatatatgcataat 103 ||||||||||||||||||||| Sbjct: 4154 atgtatatatatatgcataat 4134
>emb|BX842671.2| Mouse DNA sequence from clone RP23-282E22 on chromosome 4, complete sequence Length = 6510 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 tcacaaacatgtcacatggca 83 ||||||||||||||||||||| Sbjct: 5795 tcacaaacatgtcacatggca 5815
>emb|BX537328.7| Mouse DNA sequence from clone RP23-269E13 on chromosome 4, complete sequence Length = 16634 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 tcacaaacatgtcacatggca 83 ||||||||||||||||||||| Sbjct: 1285 tcacaaacatgtcacatggca 1305
>dbj|AB028609.2| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K7P8 Length = 78529 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 atgtatatatatatgcataat 103 ||||||||||||||||||||| Sbjct: 64516 atgtatatatatatgcataat 64536
>gb|AC091254.77| Mus musculus strain C57BL/6J clone rp23-364j24 map 17, complete sequence Length = 187696 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 198 tcctcaaacaaaacagaaaca 218 ||||||||||||||||||||| Sbjct: 140032 tcctcaaacaaaacagaaaca 140052
>gb|AC091484.8| Mus musculus strain C57BL/6J chromosome 17 clone rp23-386a1, complete sequence Length = 205343 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 tcctcaaacaaaacagaaaca 218 ||||||||||||||||||||| Sbjct: 176428 tcctcaaacaaaacagaaaca 176408
>gb|AC149584.4| Mus musculus BAC clone RP24-298L13 from 8, complete sequence Length = 182904 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 gcatgtatatatatatgcata 101 ||||||||||||||||||||| Sbjct: 10868 gcatgtatatatatatgcata 10848
>gb|AC140929.4| Mus musculus BAC clone RP23-258I3 from 8, complete sequence Length = 221905 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 gcatgtatatatatatgcata 101 ||||||||||||||||||||| Sbjct: 116901 gcatgtatatatatatgcata 116921
>gb|AC116759.13| Mus musculus chromosome 18, clone RP23-383E12, complete sequence Length = 203049 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 atggcatgtatatatatatg 97 |||||||||||||||||||| Sbjct: 8791 atggcatgtatatatatatg 8810
>gb|AC123698.15| Mus musculus chromosome 15, clone RP23-331P14, complete sequence Length = 201739 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 catgtatatatatatgcata 101 |||||||||||||||||||| Sbjct: 163178 catgtatatatatatgcata 163159
>ref|NM_129462.2| Arabidopsis thaliana unknown protein AT2G39050 mRNA, complete cds Length = 1271 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgcc 358 |||||||||| ||||||||||||| Sbjct: 966 gatcttccagagctggttgtcgcc 943
>gb|AC122011.3| Mus musculus chromosome 10 clone RP24-352E6, complete sequence Length = 181468 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 catgtatatatatatgcata 101 |||||||||||||||||||| Sbjct: 114111 catgtatatatatatgcata 114092
>gb|DQ213100.1| Taeniopygia guttata clone 0058P0015F04 MGC75753-like mRNA, complete sequence Length = 1368 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 459 atcctgatgcagcggtagcc 478 |||||||||||||||||||| Sbjct: 455 atcctgatgcagcggtagcc 436
>ref|XM_530087.1| PREDICTED: Pan troglodytes LOC456449 (LOC456449), mRNA Length = 1546 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 ctcatgcatccatcacacat 139 |||||||||||||||||||| Sbjct: 1122 ctcatgcatccatcacacat 1141
>gb|AC147352.2| Xenopus tropicalis clone CH216-157J16, complete sequence Length = 141579 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 aatatgatgagataaaccaa 50 |||||||||||||||||||| Sbjct: 13878 aatatgatgagataaaccaa 13897
>gb|AC106842.7| Mus musculus chromosome 7, clone RP24-165F13, complete sequence Length = 140252 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 catgtatatatatatgcata 101 |||||||||||||||||||| Sbjct: 81205 catgtatatatatatgcata 81186
>gb|AC005742.1| Mus musculus chromosome 11, BAC clone CT7-111I18 (LBNL M01), complete sequence Length = 159500 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 catgtatatatatatgcata 101 |||||||||||||||||||| Sbjct: 102488 catgtatatatatatgcata 102507
>gb|AC162892.7| Mus musculus chromosome 5, clone RP23-257D19, complete sequence Length = 155647 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 catgtatatatatatgcata 101 |||||||||||||||||||| Sbjct: 23938 catgtatatatatatgcata 23957
>gb|AC166079.2| Mus musculus BAC clone RP23-51L15 from chromosome 7, complete sequence Length = 193749 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 atgtatatatatatgcataa 102 |||||||||||||||||||| Sbjct: 70123 atgtatatatatatgcataa 70142
>gb|AC123992.8| Mus musculus chromosome 15, clone RP24-308E20, complete sequence Length = 170609 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 catgtatatatatatgcata 101 |||||||||||||||||||| Sbjct: 4017 catgtatatatatatgcata 3998
>gb|AC122941.3| Mus musculus BAC clone RP23-1E3 from chromosome 8, complete sequence Length = 244220 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 catgtatatatatatgcata 101 |||||||||||||||||||| Sbjct: 109345 catgtatatatatatgcata 109326
>gb|AC125406.4| Mus musculus BAC clone RP23-32C18 from chromosome 19, complete sequence Length = 208557 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 atgtatatatatatgcataa 102 |||||||||||||||||||| Sbjct: 121670 atgtatatatatatgcataa 121651
>gb|AC137583.7| Mus musculus chromosome 13, clone RP23-140F24, complete sequence Length = 218518 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 atgtatatatatatgcataa 102 |||||||||||||||||||| Sbjct: 78818 atgtatatatatatgcataa 78837
>gb|AC115954.11| Mus musculus chromosome 16, clone RP24-62P21, complete sequence Length = 205819 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 catgtatatatatatgcata 101 |||||||||||||||||||| Sbjct: 65580 catgtatatatatatgcata 65561
>gb|AC161364.4| Mus musculus BAC clone RP24-353J16 from chromosome 6, complete sequence Length = 182872 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 acatgtcacatggcatgtat 88 |||||||||||||||||||| Sbjct: 80082 acatgtcacatggcatgtat 80063
>gb|AC124980.7| Mus musculus chromosome 13, clone RP24-133J11, complete sequence Length = 215331 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 atgtatatatatatgcataa 102 |||||||||||||||||||| Sbjct: 194721 atgtatatatatatgcataa 194740
>gb|AC115357.5| Mus musculus BAC clone RP23-81J4 from chromosome 14, complete sequence Length = 233685 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 gaaacattcagtacttgctt 270 |||||||||||||||||||| Sbjct: 149003 gaaacattcagtacttgctt 148984
>gb|AC136513.2| Mus musculus BAC clone RP23-477N9 from chromosome 5, complete sequence Length = 188517 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 gcatgtatatatatatgcat 100 |||||||||||||||||||| Sbjct: 134577 gcatgtatatatatatgcat 134596
>gb|AC129336.4| Mus musculus BAC clone RP23-113I7 from chromosome 10, complete sequence Length = 215437 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 catgtatatatatatgcata 101 |||||||||||||||||||| Sbjct: 22367 catgtatatatatatgcata 22348
>gb|AC135362.3| Mus musculus BAC clone RP23-286J13 from chromosome 8, complete sequence Length = 173357 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 catgtatatatatatgcata 101 |||||||||||||||||||| Sbjct: 144235 catgtatatatatatgcata 144254
>gb|AC133509.2| Mus musculus BAC clone RP23-402L22 from chromosome 19, complete sequence Length = 214658 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 catgtatatatatatgcata 101 |||||||||||||||||||| Sbjct: 119042 catgtatatatatatgcata 119023
>gb|AC124383.3| Mus musculus BAC clone RP24-411E14 from chromosome 18, complete sequence Length = 175177 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 atgtatatatatatgcataa 102 |||||||||||||||||||| Sbjct: 71617 atgtatatatatatgcataa 71636
>gb|AC084392.1| Mus musculus BAC clone GS1-182G5 from UL, complete sequence Length = 142732 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 catgtatatatatatgcata 101 |||||||||||||||||||| Sbjct: 41211 catgtatatatatatgcata 41230
>ref|XM_736171.1| Plasmodium chabaudi chabaudi hypothetical protein (PC109152.00.0) partial mRNA Length = 180 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 catgtatatatatatgcata 101 |||||||||||||||||||| Sbjct: 169 catgtatatatatatgcata 150
>gb|AC004413.2| Homo sapiens PAC clone RP4-650P9 from 7, complete sequence Length = 114827 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 aaccaacaaacttcagcata 314 |||||||||||||||||||| Sbjct: 26467 aaccaacaaacttcagcata 26448
>gb|AC113292.6| Mus musculus chromosome 15, clone RP23-418M3, complete sequence Length = 218109 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 tatatatatatgcataataa 105 |||||||||||||||||||| Sbjct: 190497 tatatatatatgcataataa 190516
>gb|AC146202.3| Pan troglodytes BAC clone RP43-35A11 from 7, complete sequence Length = 161532 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 catgtatatatatatgcata 101 |||||||||||||||||||| Sbjct: 47315 catgtatatatatatgcata 47296
>emb|Z97353.3|HS90L6 Human DNA sequence from clone RP1-90L6 on chromosome 22q11.21-11.23, complete sequence Length = 190837 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 cacaaacatgtcacatggca 83 |||||||||||||||||||| Sbjct: 189641 cacaaacatgtcacatggca 189622
>emb|AL512600.5| Human DNA sequence from clone RP11-452A14 on chromosome 6, complete sequence Length = 141172 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 aatatgatgagataaaccaa 50 |||||||||||||||||||| Sbjct: 27780 aatatgatgagataaaccaa 27761
>emb|AL355482.13| Human DNA sequence from clone RP11-538D16 on chromosome 1q25.1-31.3 Contains the gene for a protein similar to zinc finger protein 135 (clone pHZ-17) zinc finger protein 61 (LOC127665) and two novel genes (LOC149157), complete sequence Length = 74515 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 ctcatgcatccatcacacat 139 |||||||||||||||||||| Sbjct: 39384 ctcatgcatccatcacacat 39403
>gb|AC158960.4| Mus musculus chromosome 1, clone RP23-315O2, complete sequence Length = 176947 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 atgtatatatatatgcataa 102 |||||||||||||||||||| Sbjct: 524 atgtatatatatatgcataa 543
>emb|CR385039.8| Zebrafish DNA sequence from clone DKEYP-31D1 in linkage group 24, complete sequence Length = 166302 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 gcatgtatatatatatgcataata 104 |||||||||||||||| ||||||| Sbjct: 70486 gcatgtatatatatatccataata 70509
>gb|AC128692.11| Homo sapiens 3 BAC RP11-743G11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 83627 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 catgtatatatatatgcata 101 |||||||||||||||||||| Sbjct: 3012 catgtatatatatatgcata 3031
>emb|CR382398.1| Plasmodium falciparum chromosome 6, complete sequence; segment 1/5 Length = 349418 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 tatatatatatgcataataacaag 109 |||||||||||| ||||||||||| Sbjct: 24496 tatatatatatgtataataacaag 24473
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 tatatatatatgcataataa 105 |||||||||||||||||||| Sbjct: 427961 tatatatatatgcataataa 427980
>gb|AC102876.31| Mus musculus chromosome 1, clone RP24-492P7, complete sequence Length = 185929 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 catgtatatatatatgcata 101 |||||||||||||||||||| Sbjct: 164808 catgtatatatatatgcata 164827
>emb|AL593845.5| Zebrafish DNA sequence from clone BUSM1-142B24 in linkage group 17 Contains a novel gene for a protein similar to human FLJ11186, a novel gene similar to human KIAA1316 and fly CG2747, a novel gene for a protein with a HECT-domain (ubiquitin-transferase) and a CpG island, complete sequence Length = 89159 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 78 atggcatgtatatatatatgcata 101 |||| ||||||||||||||||||| Sbjct: 9266 atggtatgtatatatatatgcata 9289
>emb|AL645741.15| Mouse DNA sequence from clone RP23-239O19 on chromosome 11 Contains the Rad50 gene for RAD50 homolog (S. cerevisiae), the Il5 gene for interleukin 5, a pseudogene similar to part of glyceraldehyde-3-phosphate dehydrogenase (Gapd), a novel gene, a ribosomal protein S2 (Rps2) pseudogene, the Il13 gene for interleukin 13, the 5' end of the Il4 gene for interleukin 4 and a CpG island, complete sequence Length = 121121 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 catgtatatatatatgcata 101 |||||||||||||||||||| Sbjct: 16473 catgtatatatatatgcata 16492
>emb|AL592185.35| Mouse DNA sequence from clone RP23-341J22 on chromosome 11 Contains a novel gene, the Nos2 gene for inducible macrophage nitric oxide synthase 2 and the 3' end of the Lgals9 gene for soluble galactose binding lectin 9, complete sequence Length = 178443 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 tatatatatatgcataataa 105 |||||||||||||||||||| Sbjct: 22033 tatatatatatgcataataa 22052
>emb|AL672026.11| Mouse DNA sequence from clone RP23-403O11 on chromosome X, complete sequence Length = 200566 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atatatatgcataataacaa 108 |||||||||||||||||||| Sbjct: 186346 atatatatgcataataacaa 186327
>gb|AC122938.3| Homo sapiens BAC clone RP11-201O10 from 4, complete sequence Length = 149028 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 tatatatatatgcataataa 105 |||||||||||||||||||| Sbjct: 37374 tatatatatatgcataataa 37393
>gb|AF525421.1| Mus musculus adenosine deaminase ADAR2 mRNA, complete cds; alternatively spliced Length = 6917 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 ccatcctttttattccagaaacat 257 ||||| |||||||||||||||||| Sbjct: 417 ccatcatttttattccagaaacat 440
>emb|BX324186.12| Zebrafish DNA sequence from clone DKEY-18B8 in linkage group 17, complete sequence Length = 153540 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 78 atggcatgtatatatatatgcata 101 |||| ||||||||||||||||||| Sbjct: 129832 atggtatgtatatatatatgcata 129855
>gb|AC116562.6| Homo sapiens BAC clone RP11-489M13 from 4, complete sequence Length = 174826 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 catgtatatatatatgcata 101 |||||||||||||||||||| Sbjct: 18159 catgtatatatatatgcata 18178
>ref|NM_001024838.1| Mus musculus adenosine deaminase, RNA-specific, B1 (Adarb1), transcript variant 3, mRNA Length = 6662 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 ccatcctttttattccagaaacat 257 ||||| |||||||||||||||||| Sbjct: 465 ccatcatttttattccagaaacat 488
>gb|AC080081.5| Homo sapiens BAC clone RP11-530E5 from 4, complete sequence Length = 77730 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 tgtatatatatatgcataat 103 |||||||||||||||||||| Sbjct: 69267 tgtatatatatatgcataat 69248
>gb|AC005770.3| Arabidopsis thaliana chromosome 2 clone T7F6 map CIC10A06, complete sequence Length = 96827 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgcc 358 |||||||||| ||||||||||||| Sbjct: 77194 gatcttccagagctggttgtcgcc 77171
>gb|AC002510.3| Arabidopsis thaliana chromosome 2 clone T32G6 map CIC11C08, complete sequence Length = 91979 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 atgatgagataaaccaattctatt 57 ||||||||| |||||||||||||| Sbjct: 11432 atgatgagacaaaccaattctatt 11409
>gb|AY093795.1| Arabidopsis thaliana At2g39050/T7F6.22 mRNA, complete cds Length = 954 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgcc 358 |||||||||| ||||||||||||| Sbjct: 942 gatcttccagagctggttgtcgcc 919
>gb|AC107055.3| Homo sapiens BAC clone RP11-436G13 from 4, complete sequence Length = 144794 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 catgtatatatatatgcata 101 |||||||||||||||||||| Sbjct: 60045 catgtatatatatatgcata 60026
>gb|AC018953.11| Homo sapiens chromosome 8, clone RP11-573J24, complete sequence Length = 182712 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 gcatgtatatatatatgcat 100 |||||||||||||||||||| Sbjct: 83111 gcatgtatatatatatgcat 83092
>gb|AC079403.3| Homo sapiens BAC clone RP11-704A20 from 4, complete sequence Length = 180699 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 tatatatatatgcataataa 105 |||||||||||||||||||| Sbjct: 14707 tatatatatatgcataataa 14688
>gb|AC023670.6| Homo sapiens BAC clone RP11-457M7 from Xq23, complete sequence Length = 59565 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 catgtatatatatatgcata 101 |||||||||||||||||||| Sbjct: 42004 catgtatatatatatgcata 41985
>gb|AC008426.4| Homo sapiens chromosome 5 clone CTC-307A7, complete sequence Length = 150870 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 gcatgtatatatatatgcat 100 |||||||||||||||||||| Sbjct: 25149 gcatgtatatatatatgcat 25168
>dbj|AK164931.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched library, clone:E030028L10 product:adenosine deaminase, RNA-specific, B1, full insert sequence Length = 3291 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 ccatcctttttattccagaaacat 257 ||||| |||||||||||||||||| Sbjct: 433 ccatcatttttattccagaaacat 456
>gb|DP000045.1| Pongo pygmaeus target 106 genomic scaffold Length = 644818 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 catgtatatatatatgcata 101 |||||||||||||||||||| Sbjct: 269985 catgtatatatatatgcata 269966
>gb|AF411801.1|AF411801 Arabidopsis thaliana At2g39050/T7F6.22 mRNA, complete cds Length = 1209 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgcc 358 |||||||||| ||||||||||||| Sbjct: 966 gatcttccagagctggttgtcgcc 943
>gb|AC158380.2| Mus musculus BAC clone RP24-178I16 from chromosome 6, complete sequence Length = 168179 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 catgtatatatatatgcata 101 |||||||||||||||||||| Sbjct: 51876 catgtatatatatatgcata 51895
>gb|AC157772.4| Mus musculus chromosome 15, clone RP24-323B16, complete sequence Length = 182149 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 catgtatatatatatgcata 101 |||||||||||||||||||| Sbjct: 181811 catgtatatatatatgcata 181830
>dbj|AK089594.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830003P06 product:hypothetical protein, full insert sequence Length = 1807 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 atgtatatatatatgcataa 102 |||||||||||||||||||| Sbjct: 1024 atgtatatatatatgcataa 1005
>gb|BC062806.1| Mus musculus adenosine deaminase, RNA-specific, B1, mRNA (cDNA clone IMAGE:1244670) Length = 730 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 ccatcctttttattccagaaacat 257 ||||| |||||||||||||||||| Sbjct: 594 ccatcatttttattccagaaacat 617
>gb|AC155909.9| Mus musculus 10 BAC RP24-477D23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 195877 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 catgtatatatatatgcata 101 |||||||||||||||||||| Sbjct: 113275 catgtatatatatatgcata 113294
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 tatatatatatgcataataa 105 |||||||||||||||||||| Sbjct: 506400 tatatatatatgcataataa 506381
>emb|BX819436.1|CNS0A8S2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB77ZF10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1226 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgcc 358 |||||||||| ||||||||||||| Sbjct: 952 gatcttccagagctggttgtcgcc 929
>gb|AC068042.5| Homo sapiens BAC clone RP11-535B12 from 2, complete sequence Length = 172617 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 atggcatgtatatatatatg 97 |||||||||||||||||||| Sbjct: 120964 atggcatgtatatatatatg 120983
>gb|AC152834.2| Pan troglodytes BAC clone CH251-513M11 from chromosome unknown, complete sequence Length = 213409 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 tatatatatatgcataataa 105 |||||||||||||||||||| Sbjct: 169595 tatatatatatgcataataa 169576
>gb|AC123690.19| Mus musculus chromosome 1, clone RP23-322M7, complete sequence Length = 191990 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 atgtatatatatatgcataa 102 |||||||||||||||||||| Sbjct: 138448 atgtatatatatatgcataa 138467
>gb|AF463769.1| Mus musculus strain C57BL/6J cytokine gene cluster, partial sequence Length = 34408 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 catgtatatatatatgcata 101 |||||||||||||||||||| Sbjct: 11795 catgtatatatatatgcata 11776
>gb|AY087909.1| Arabidopsis thaliana clone 39558 mRNA, complete sequence Length = 1186 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 335 gatcttccagcgctggttgtcgcc 358 |||||||||| ||||||||||||| Sbjct: 966 gatcttccagagctggttgtcgcc 943
>gb|AC138085.2| Homo sapiens X BAC RP11-146D5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 75932 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 catgtatatatatatgcata 101 |||||||||||||||||||| Sbjct: 42002 catgtatatatatatgcata 41983
>gb|AY162454.1| Mus musculus adenosine deaminase (Adarb1) mRNA, complete cds, alternatively spliced Length = 6583 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 ccatcctttttattccagaaacat 257 ||||| |||||||||||||||||| Sbjct: 417 ccatcatttttattccagaaacat 440
>gb|AC111094.12| Mus musculus chromosome 3, clone RP23-171O7, complete sequence Length = 187464 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 gcatgtatatatatatgcat 100 |||||||||||||||||||| Sbjct: 161277 gcatgtatatatatatgcat 161258
>gb|AC101851.11| Mus musculus chromosome 7, clone RP23-276E14, complete sequence Length = 175088 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 catgtatatatatatgcata 101 |||||||||||||||||||| Sbjct: 163255 catgtatatatatatgcata 163236
>emb|CR954168.11| Zebrafish DNA sequence from clone DKEY-264P5 in linkage group 19, complete sequence Length = 128597 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 cacatggcatgtatatatatatgc 98 ||||||||| |||||||||||||| Sbjct: 76529 cacatggcacgtatatatatatgc 76552
>gb|AC154694.2| Mus musculus BAC clone RP24-341A16 from 16, complete sequence Length = 171564 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 catgtatatatatatgcataataa 105 ||||||||| |||||||||||||| Sbjct: 88363 catgtatatgtatatgcataataa 88340
>emb|BX664631.6| Zebrafish DNA sequence from clone DKEY-28H18 in linkage group 22, complete sequence Length = 220242 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 cacatggcatgtatatatatatgc 98 ||||||||| |||||||||||||| Sbjct: 67767 cacatggcacgtatatatatatgc 67744
>emb|BX927293.15| Zebrafish DNA sequence from clone DKEY-95H12 in linkage group 18, complete sequence Length = 150229 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 tatatatatatgcataataa 105 |||||||||||||||||||| Sbjct: 134231 tatatatatatgcataataa 134212
>emb|CR450840.18| Zebrafish DNA sequence from clone CH211-261D9 in linkage group 14, complete sequence Length = 194617 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 cacatggcatgtatatatatatgc 98 ||||||||| |||||||||||||| Sbjct: 185059 cacatggcacgtatatatatatgc 185036 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 cacatggcatgtatatatatatgc 98 ||||||||| |||||||||||||| Sbjct: 184716 cacatggcacgtatatatatatgc 184693 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 cacatggcatgtatatatatatgc 98 ||||||||| |||||||||||||| Sbjct: 184373 cacatggcacgtatatatatatgc 184350 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 cacatggcatgtatatatatatgc 98 ||||||||| |||||||||||||| Sbjct: 184030 cacatggcacgtatatatatatgc 184007 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 cacatggcatgtatatatatatgc 98 ||||||||| |||||||||||||| Sbjct: 183687 cacatggcacgtatatatatatgc 183664 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 cacatggcatgtatatatatatgc 98 ||||||||| |||||||||||||| Sbjct: 183344 cacatggcacgtatatatatatgc 183321
>gb|AC155176.6| Mus musculus 10 BAC RP24-219F17 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 186725 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 ccatcctttttattccagaaacat 257 ||||| |||||||||||||||||| Sbjct: 81187 ccatcatttttattccagaaacat 81210
>emb|AL357172.3|CNS05TDW Human chromosome 14 DNA sequence BAC R-789A21 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 198714 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 gcatgtatatatatatgcat 100 |||||||||||||||||||| Sbjct: 156385 gcatgtatatatatatgcat 156404
>gb|AC121315.14| Mus musculus chromosome 3, clone RP24-488I7, complete sequence Length = 153807 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 atgtatatatatatgcataa 102 |||||||||||||||||||| Sbjct: 46746 atgtatatatatatgcataa 46765
>dbj|AP003094.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-659O1, complete sequences Length = 179724 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 gcatgtatatatatatgcat 100 |||||||||||||||||||| Sbjct: 178997 gcatgtatatatatatgcat 178978
>dbj|AP001561.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-732G1, complete sequences Length = 195800 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 gcatgtatatatatatgcat 100 |||||||||||||||||||| Sbjct: 47252 gcatgtatatatatatgcat 47233
>gb|AC161802.7| Mus musculus chromosome 5, clone RP23-477G6, complete sequence Length = 176484 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 catgtatatatatatgcata 101 |||||||||||||||||||| Sbjct: 29801 catgtatatatatatgcata 29782
>gb|AC137126.13| Mus musculus chromosome 15, clone RP24-250I9, complete sequence Length = 193459 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 gcatgtatatatatatgcat 100 |||||||||||||||||||| Sbjct: 175485 gcatgtatatatatatgcat 175466
>gb|AC119921.12| Mus musculus chromosome 12, clone RP24-252B23, complete sequence Length = 162290 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 catgtatatatatatgcata 101 |||||||||||||||||||| Sbjct: 106233 catgtatatatatatgcata 106252
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 tatatatatatgcataataa 105 |||||||||||||||||||| Sbjct: 506400 tatatatatatgcataataa 506381
>emb|BX000493.1|CNS08CDJ Oryza sativa chromosome 11, . BAC OSJNBb0037D03 of library OSJNBb from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 130544 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 tatatatatatgcataataa 105 |||||||||||||||||||| Sbjct: 63912 tatatatatatgcataataa 63931
>gb|AC002406.1|AC002406 Mouse chromosome X BAC B178A13 (Research Genetics mouse BAC library) complete sequence Length = 194985 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 atatatatgcataataacaa 108 |||||||||||||||||||| Sbjct: 121202 atatatatgcataataacaa 121221
>gb|AC136147.4| Mus musculus BAC clone RP23-18B3 from 8, complete sequence Length = 210916 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 catgtatatatatatgcata 101 |||||||||||||||||||| Sbjct: 47369 catgtatatatatatgcata 47350
>gb|AC138621.4| Mus musculus BAC clone RP23-273E16 from 6, complete sequence Length = 225376 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 catgtatatatatatgcata 101 |||||||||||||||||||| Sbjct: 176669 catgtatatatatatgcata 176688
>emb|AL731697.16| Mouse DNA sequence from clone RP23-188L7 on chromosome X, complete sequence Length = 200250 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 atgtatatatatatgcataa 102 |||||||||||||||||||| Sbjct: 144513 atgtatatatatatgcataa 144532
>emb|AL929143.5| Mouse DNA sequence from clone RP23-339G18 on chromosome 2, complete sequence Length = 30695 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 gtatatatatatgcataataacaa 108 ||||||||||||| |||||||||| Sbjct: 19931 gtatatatatatgtataataacaa 19954
>emb|AL845543.5| Mouse DNA sequence from clone RP23-257O6 on chromosome 2, complete sequence Length = 108221 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 atgtatatatatatgcataa 102 |||||||||||||||||||| Sbjct: 99265 atgtatatatatatgcataa 99284
>emb|AL772293.7| Mouse DNA sequence from clone RP23-57D24 on chromosome 4, complete sequence Length = 251930 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 atgtatatatatatgcataa 102 |||||||||||||||||||| Sbjct: 228864 atgtatatatatatgcataa 228845
>gb|AC124634.24| Mus musculus chromosome 18, clone RP23-450K16, complete sequence Length = 178989 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 atggcatgtatatatatatg 97 |||||||||||||||||||| Sbjct: 146829 atggcatgtatatatatatg 146848
>gb|AF478849.1| Etlingera littoralis tRNA-Lys (trnK) gene, intron; and maturase K (matK) gene, complete cds; chloroplast genes for chloroplast products Length = 2680 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 tatatatatatgcataataa 105 |||||||||||||||||||| Sbjct: 711 tatatatatatgcataataa 730 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 14,148,732 Number of Sequences: 3902068 Number of extensions: 14148732 Number of successful extensions: 253309 Number of sequences better than 10.0: 156 Number of HSP's better than 10.0 without gapping: 156 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 251984 Number of HSP's gapped (non-prelim): 1294 length of query: 532 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 509 effective length of database: 17,143,297,704 effective search space: 8725938531336 effective search space used: 8725938531336 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
