ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd27f19 |
|---|---|
| Clone Library Name | barley_pub |
>TX26_PHONI (P29425) Neurotoxin Tx2-6 precursor| Length = 82 Score = 32.7 bits (73), Expect = 0.99 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%) Frame = -2 Query: 651 VEERVIATARATDEFCYDTC--CGHPGACTCHRLCYC 547 VEE AT D+ C +TC CG G C C C C Sbjct: 29 VEELGRATCAGQDQPCKETCDCCGERGECVCGGPCIC 65
>TX25A_PHONI (O76199) Neurotoxin Pn2-5A precursor| Length = 82 Score = 31.6 bits (70), Expect = 2.2 Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 2/37 (5%) Frame = -2 Query: 651 VEERVIATARATDEFCYDTC--CGHPGACTCHRLCYC 547 VEE AT D+ C TC CG G C C C C Sbjct: 29 VEELGRATCAGQDQTCKVTCDCCGERGECVCGGPCIC 65
>LEPA_MYCHJ (Q4AAQ8) GTP-binding protein lepA| Length = 598 Score = 31.2 bits (69), Expect = 2.9 Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 3/67 (4%) Frame = -3 Query: 635 LPQLEPQMNSVTTHAVDTPVHVPATDCVT---VNSEGTVLLPPASQAMDANMDSATTVLP 465 L ++ + NS H +DTP HV T V+ +EG +LL ASQ + A + V Sbjct: 58 LNAVQIRYNSYIFHLIDTPGHVDFTYEVSRSLAATEGALLLVDASQGIQA--QTLANVYL 115 Query: 464 RLENGAE 444 LEN E Sbjct: 116 ALENNLE 122
>LEPA_MYCH7 (Q4A8T9) GTP-binding protein lepA| Length = 598 Score = 31.2 bits (69), Expect = 2.9 Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 3/67 (4%) Frame = -3 Query: 635 LPQLEPQMNSVTTHAVDTPVHVPATDCVT---VNSEGTVLLPPASQAMDANMDSATTVLP 465 L ++ + NS H +DTP HV T V+ +EG +LL ASQ + A + V Sbjct: 58 LNAVQIRYNSYIFHLIDTPGHVDFTYEVSRSLAATEGALLLVDASQGIQA--QTLANVYL 115 Query: 464 RLENGAE 444 LEN E Sbjct: 116 ALENNLE 122
>LEPA_MYCH2 (Q9ZHZ8) GTP-binding protein lepA| Length = 598 Score = 31.2 bits (69), Expect = 2.9 Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 3/67 (4%) Frame = -3 Query: 635 LPQLEPQMNSVTTHAVDTPVHVPATDCVT---VNSEGTVLLPPASQAMDANMDSATTVLP 465 L ++ + NS H +DTP HV T V+ +EG +LL ASQ + A + V Sbjct: 58 LNAVQIRYNSYIFHLIDTPGHVDFTYEVSRSLAATEGALLLVDASQGIQA--QTLANVYL 115 Query: 464 RLENGAE 444 LEN E Sbjct: 116 ALENNLE 122
>M10L1_HUMAN (Q9BXT6) Putative helicase Mov10l1 (EC 3.6.1.-) (Moloney leukemia| virus 10-like protein 1) (MOV10-like 1) Length = 1211 Score = 30.4 bits (67), Expect = 4.9 Identities = 10/28 (35%), Positives = 17/28 (60%) Frame = +2 Query: 113 NFSDKKTQRTFNRRSPKRIHXAMSHIVH 196 NF + T+NR + +R H A+ H++H Sbjct: 625 NFEPMDVEFTYNRTTSRRCHFALEHVIH 652
>TX25_PHONI (P29424) Neurotoxin Tx2-5| Length = 49 Score = 30.0 bits (66), Expect = 6.4 Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 2/49 (4%) Frame = -2 Query: 633 ATARATDEFCYDTC--CGHPGACTCHRLCYC*LRGNSSATASIAGDGCK 493 AT D+ C TC CG G C C C C A +A CK Sbjct: 1 ATCAGQDQTCKVTCDCCGERGECVCGGPCICRQGNFLIAAYKLASCKCK 49
>KR171_HUMAN (Q9BYP8) Keratin-associated protein 17-1 (Keratin associated| protein 16.1) Length = 105 Score = 30.0 bits (66), Expect = 6.4 Identities = 16/51 (31%), Positives = 19/51 (37%), Gaps = 1/51 (1%) Frame = -2 Query: 630 TARATDEFCYDTCCGHPGAC-TCHRLCYC*LRGNSSATASIAGDGCKHGQC 481 T ++ C + CC PG C C C C G S S G C C Sbjct: 10 TCCTQEQNCCEECCCQPGCCGCCGSCCGC---GGSGCGGSGCGGSCCGSSC 57
>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor| Length = 866 Score = 30.0 bits (66), Expect = 6.4 Identities = 21/65 (32%), Positives = 25/65 (38%), Gaps = 3/65 (4%) Frame = -3 Query: 659 SSPSKSGLLPQLEPQMNSVTTHAVDT---PVHVPATDCVTVNSEGTVLLPPASQAMDANM 489 +S S S P S T A T P P TD T + T P S + A+ Sbjct: 358 TSTSTSAAATTSTPTPTSAATSAESTTEAPTSTPTTDTTTPSEATTATTSPESTTVSAST 417 Query: 488 DSATT 474 SATT Sbjct: 418 TSATT 422
>VGLX_EHV1B (P28968) Glycoprotein X precursor| Length = 797 Score = 30.0 bits (66), Expect = 6.4 Identities = 21/65 (32%), Positives = 25/65 (38%), Gaps = 3/65 (4%) Frame = -3 Query: 659 SSPSKSGLLPQLEPQMNSVTTHAVDT---PVHVPATDCVTVNSEGTVLLPPASQAMDANM 489 +S S S P S T A T P P TD T + T P S + A+ Sbjct: 289 TSTSTSAAATTSTPTPTSAATSAESTTEAPTSTPTTDTTTPSEATTATTSPESTTVSAST 348 Query: 488 DSATT 474 SATT Sbjct: 349 TSATT 353
>YAB4_ARATH (Q9LDT3) Axial regulator YABBY4 (Protein INNER NO OUTER)| Length = 231 Score = 29.6 bits (65), Expect = 8.3 Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 4/47 (8%) Frame = -3 Query: 293 LIAYPRGAVHVQCSACRTINLV----LEAHEVGNVHCGQCETLXDVS 165 L P HVQC C TI LV V V CG C +L V+ Sbjct: 14 LFDLPGQICHVQCGFCTTILLVSVPFTSLSMVVTVRCGHCTSLLSVN 60
>STAM2_MOUSE (O88811) Signal transducing adapter molecule 2 (STAM-2)| (Hrs-binding protein) Length = 523 Score = 29.6 bits (65), Expect = 8.3 Identities = 15/35 (42%), Positives = 16/35 (45%) Frame = -3 Query: 653 PSKSGLLPQLEPQMNSVTTHAVDTPVHVPATDCVT 549 P G L L P MNSVT H V P D V+ Sbjct: 421 PDPMGSLRSLPPNMNSVTAHTVQPPYLSTGQDTVS 455
>FKRP_MOUSE (Q8CG64) Fukutin-related protein (EC 2.-.-.-)| Length = 494 Score = 29.6 bits (65), Expect = 8.3 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = +2 Query: 371 PRPMNKERPEHLEKMTAALAGAMTPLLHSPIAGVL*LHCPCLHPS 505 P E P HLE+M AL G+ L+ +P+A C L+ S Sbjct: 130 PDGARAESPGHLERMVEALRGSSARLVAAPVATANPARCLALNVS 174 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 102,349,664 Number of Sequences: 219361 Number of extensions: 2256921 Number of successful extensions: 6074 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 5779 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6071 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6314008338 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
