ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd27f18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK061556.1| Oryza sativa (japonica cultivar-group) cDNA clon... 515 e-143
2dbj|AK073271.1| Oryza sativa (japonica cultivar-group) cDNA clon... 507 e-140
3dbj|AK062241.1| Oryza sativa (japonica cultivar-group) cDNA clon... 476 e-131
4gb|AY108395.1| Zea mays PCO142081 mRNA sequence 319 7e-84
5gb|AY103604.1| Zea mays PCO142082 mRNA sequence 311 2e-81
6gb|BT017634.1| Zea mays clone EL01N0437H07.c mRNA sequence 196 7e-47
7dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 168 2e-38
8dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic D... 168 2e-38
9dbj|AP004993.3| Oryza sativa (japonica cultivar-group) genomic D... 168 2e-38
10ref|XM_482516.1| Oryza sativa (japonica cultivar-group), mRNA 90 1e-14
11dbj|AK064881.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 1e-14
12dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 78 5e-11
13dbj|AP003881.3| Oryza sativa (japonica cultivar-group) genomic D... 78 5e-11
14dbj|AK063768.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 5e-11
15dbj|AK103728.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 2e-10
16dbj|AK103130.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 2e-10
17gb|U63530.1|OSU63530 Oryza sativa osRAD23 mRNA, complete cds 76 2e-10
18dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 70 1e-08
19dbj|AP005722.3| Oryza sativa (japonica cultivar-group) genomic D... 70 1e-08
20dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic D... 70 1e-08
21ref|XM_752001.1| Ustilago maydis 521 hypothetical protein (UM009... 54 7e-04
22emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 52 0.003
23gb|CP000249.1| Frankia sp. CcI3, complete genome 52 0.003
24gb|AC097674.6| Rattus norvegicus 2 CH230-75D18 (Children's Hospi... 52 0.003
25gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 52 0.003
26gb|AY609404.1| Sus scrofa clone Clu_10503.scr.msk.p1.Contig5, mR... 52 0.003
27ref|XM_364590.1| Magnaporthe grisea 70-15 hypothetical protein (... 50 0.011
28gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 50 0.011
29gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence 50 0.011
30ref|XM_480516.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.042
31dbj|AP005499.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.042
32dbj|AP004746.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.042
33gb|AY107093.1| Zea mays PCO127836 mRNA sequence 48 0.042
34gb|AC120496.2| Genomic sequence for Sorghum bicolor, clone SBBBc... 46 0.17
35gb|AC155270.3| Mus musculus BAC clone RP23-195H19 from chromosom... 46 0.17
36emb|BX324153.4| Zebrafish DNA sequence from clone CH211-160M3 in... 46 0.17
37ref|XM_678316.1| PREDICTED: Danio rerio similar to gonadotropin-... 46 0.17
38gb|AY108301.1| Zea mays PCO104381 mRNA sequence 46 0.17
39gb|AC158383.3| Mus musculus BAC clone RP23-135O16 from chromosom... 46 0.17
40gb|AC129945.9| Mus musculus chromosome 3, clone RP24-512A14, com... 44 0.66
41ref|XM_360477.1| Magnaporthe grisea 70-15 predicted protein (MG1... 44 0.66
42ref|XM_365030.1| Magnaporthe grisea 70-15 hypothetical protein (... 44 0.66
43gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 44 0.66
44emb|AL121938.10|HSDJ167O5 Human DNA sequence from clone RP1-167O... 44 0.66
45emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete ... 44 0.66
46gb|AY106748.1| Zea mays PCO104379 mRNA sequence 44 0.66
47gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 42 2.6
48gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chr... 42 2.6
49gb|AC138654.4| Mus musculus BAC clone RP23-344O11 from chromosom... 42 2.6
50gb|DQ415922.1| Cleome spinosa clone BAC Cs1, complete sequence 42 2.6
51ref|XM_572203.1| Cryptococcus neoformans var. neoformans JEC21 h... 42 2.6
52gb|CP000316.1| Polaromonas sp. JS666, complete genome 42 2.6
53ref|XM_503441.1| Yarrowia lipolytica CLIB122, YALI0E02024g predi... 42 2.6
54emb|BX295540.1|NC49D12 Neurospora crassa DNA linkage group VI Co... 42 2.6
55emb|AL954258.2| Pan troglodytes chromosome 22 clone PTB-146D01 m... 42 2.6
56emb|AL116512.1|CNS01D8O Botrytis cinerea strain T4 cDNA library 42 2.6
57gb|AF190427.1|AF190427 Colletotrichum lindemuthianum putative GA... 42 2.6
58gb|AF226688.1|AF226688 Bombyx mori fibroin heavy chain Fib-H (fi... 42 2.6
59emb|AL163302.2|HS21C102 Homo sapiens chromosome 21 segment HS21C102 42 2.6
60emb|BX322563.1|HSQ21G24 Homo sapiens chromosome 21 from cosmid L... 42 2.6
61emb|BX322561.1|HSE12310 Homo sapiens chromosome 21 from PAC RPCI... 42 2.6
62emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 42 2.6

>dbj|AK061556.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-C08, full
            insert sequence
          Length = 1567

 Score =  515 bits (260), Expect = e-143
 Identities = 488/563 (86%), Gaps = 12/563 (2%)
 Strand = Plus / Minus

                                                                        
Query: 161  aacatctattgttgttcctcaaactcgtggccatgatccaaaagatagttggcagccagt 220
            |||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||| 
Sbjct: 1361 aacacctattgttgatcctcaaactcatggccatgatccaaaagatagttggcagccagc 1302

                                                                        
Query: 221  tcttcatccctgttgcatgcaaagaagacctccaacacaagctcacgattgaaccccatt 280
            ||||||||| |||||||||| |||||||||||||| || |||||||| ||||||||||||
Sbjct: 1301 tcttcatccttgttgcatgcgaagaagacctccaaaacgagctcacggttgaaccccatt 1242

                                                                        
Query: 281  gactcaagccgctggatggcctcccgttcttctggagtaacttgaactgcctgtggcatt 340
            | ||| |||||||| |||||||||||||| ||||||||||||  || |||||||||||| 
Sbjct: 1241 gcctccagccgctgaatggcctcccgttcctctggagtaactgtaagtgcctgtggcata 1182

                                                                        
Query: 341  tgagctgccagtgcgcctagtatatttccgccagca---ccactctcaggtgtttcattt 397
               ||||| |||   |||||||| ||||| ||||||   || || ||||| | |||||| 
Sbjct: 1181 gcggctgctagttgacctagtatgtttcccccagcagcgccgctatcaggagattcattc 1122

                                                                        
Query: 398  accaggcggagaaactcagcctgattttcctgaatcaaccgcaggatctgtggattttgt 457
            ||||| |||||||| |||||||||||||||||||||||||||| ||| || ||||| || 
Sbjct: 1121 accagacggagaaattcagcctgattttcctgaatcaaccgcaagatttgcggattctgc 1062

                                                                        
Query: 458  ttccccagctcttgaagcattggctgtaggatttggggattagcctggaccaatgcaagc 517
            ||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 1061 ttcccaagctcttgaagcattggctgcaagatttggggattagcctggaccaatgcaagc 1002

                                                                        
Query: 518  agtgcttggaactgtggaagctgtcgcaatgcatcaagggcaccggcaccggcacccaca 577
            || ||||||||||||||||| ||||||||||||||||||||||| |||||||||||  ||
Sbjct: 1001 agcgcttggaactgtggaagttgtcgcaatgcatcaagggcaccagcaccggcaccggca 942

                                                                        
Query: 578  c------cagcaccagcattggccccaccacttggaacaccctgtgggaaaaggtttaga 631
            |      ||||||||| ||| | |||| |||||||||  ||||| ||||| |||||||||
Sbjct: 941  ccagcagcagcaccaggatttgacccagcacttggaatgccctgggggaataggtttaga 882

                                                                        
Query: 632  ggattcgcattaggcccagcagagacaccaccagatggctgcactgccggtagaggtgca 691
            |||||||||||||| |   | ||| ||||||||| ||||||||| | |||| ||||||||
Sbjct: 881  ggattcgcattaggtc---ctgaggcaccaccagctggctgcacaggcggtggaggtgca 825

                                   
Query: 692  gcctgagcctgggatggagcctg 714
            ||||||||||| |||||| ||||
Sbjct: 824  gcctgagcctgagatggaacctg 802



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>dbj|AK073271.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033029B07, full
            insert sequence
          Length = 1629

 Score =  507 bits (256), Expect = e-140
 Identities = 488/563 (86%), Gaps = 13/563 (2%)
 Strand = Plus / Minus

                                                                        
Query: 161  aacatctattgttgttcctcaaactcgtggccatgatccaaaagatagttggcagccagt 220
            |||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||| 
Sbjct: 1395 aacacctattgttgatcctcaaactcatggccatgatccaaaagatagttggcagccagc 1336

                                                                        
Query: 221  tcttcatccctgttgcatgcaaagaagacctccaacacaagctcacgattgaaccccatt 280
            ||||||||| |||||||||| |||||||||||||| || |||||||| ||||||||||||
Sbjct: 1335 tcttcatccttgttgcatgcgaagaagacctccaa-acgagctcacggttgaaccccatt 1277

                                                                        
Query: 281  gactcaagccgctggatggcctcccgttcttctggagtaacttgaactgcctgtggcatt 340
            | ||| |||||||| |||||||||||||| ||||||||||||  || |||||||||||| 
Sbjct: 1276 gcctccagccgctgaatggcctcccgttcctctggagtaactgtaagtgcctgtggcata 1217

                                                                        
Query: 341  tgagctgccagtgcgcctagtatatttccgccagca---ccactctcaggtgtttcattt 397
               ||||| |||   |||||||| ||||| ||||||   || || ||||| | |||||| 
Sbjct: 1216 gcggctgctagttgacctagtatgtttcccccagcagcgccgctatcaggagattcattc 1157

                                                                        
Query: 398  accaggcggagaaactcagcctgattttcctgaatcaaccgcaggatctgtggattttgt 457
            ||||| |||||||| |||||||||||||||||||||||||||| ||| || ||||| || 
Sbjct: 1156 accagacggagaaattcagcctgattttcctgaatcaaccgcaagatttgcggattctgc 1097

                                                                        
Query: 458  ttccccagctcttgaagcattggctgtaggatttggggattagcctggaccaatgcaagc 517
            ||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 1096 ttcccaagctcttgaagcattggctgcaagatttggggattagcctggaccaatgcaagc 1037

                                                                        
Query: 518  agtgcttggaactgtggaagctgtcgcaatgcatcaagggcaccggcaccggcacccaca 577
            || ||||||||||||||||| ||||||||||||||||||||||| |||||||||||  ||
Sbjct: 1036 agcgcttggaactgtggaagttgtcgcaatgcatcaagggcaccagcaccggcaccggca 977

                                                                        
Query: 578  c------cagcaccagcattggccccaccacttggaacaccctgtgggaaaaggtttaga 631
            |      ||||||||| ||| | |||| |||||||||  ||||| ||||| |||||||||
Sbjct: 976  ccagcagcagcaccaggatttgacccagcacttggaatgccctgggggaataggtttaga 917

                                                                        
Query: 632  ggattcgcattaggcccagcagagacaccaccagatggctgcactgccggtagaggtgca 691
            |||||||||||||| |   | ||| ||||||||| ||||||||| | |||| ||||||||
Sbjct: 916  ggattcgcattaggtc---ctgaggcaccaccagctggctgcacaggcggtggaggtgca 860

                                   
Query: 692  gcctgagcctgggatggagcctg 714
            ||||||||||| |||||| ||||
Sbjct: 859  gcctgagcctgagatggaacctg 837



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>dbj|AK062241.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-E09, full
           insert sequence
          Length = 726

 Score =  476 bits (240), Expect = e-131
 Identities = 430/493 (87%), Gaps = 9/493 (1%)
 Strand = Plus / Minus

                                                                       
Query: 161 aacatctattgttgttcctcaaactcgtggccatgatccaaaagatagttggcagccagt 220
           |||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||| 
Sbjct: 493 aacacctattgttgatcctcaaactcatggccatgatccaaaagatagttggcagccagc 434

                                                                       
Query: 221 tcttcatccctgttgcatgcaaagaagacctccaacacaagctcacgattgaaccccatt 280
           ||||||||| |||||||||| |||||||||||||| || |||||||| ||||||||||||
Sbjct: 433 tcttcatccttgttgcatgcgaagaagacctccaaaacgagctcacggttgaaccccatt 374

                                                                       
Query: 281 gactcaagccgctggatggcctcccgttcttctggagtaacttgaactgcctgtggcatt 340
           | ||| |||||||| |||||||||||||| ||||||||||||  || |||||||||||| 
Sbjct: 373 gcctccagccgctgaatggcctcccgttcctctggagtaactgtaagtgcctgtggcata 314

                                                                       
Query: 341 tgagctgccagtgcgcctagtatatttccgccagca---ccactctcaggtgtttcattt 397
              ||||| |||   |||||||| ||||| ||||||   || || ||||| | |||||| 
Sbjct: 313 gcggctgctagttgacctagtatgtttcccccagcagcgccgctatcaggagattcattc 254

                                                                       
Query: 398 accaggcggagaaactcagcctgattttcctgaatcaaccgcaggatctgtggattttgt 457
           ||||| |||||||| |||||||||||||||||||||||||||| ||| || ||||| || 
Sbjct: 253 accagacggagaaattcagcctgattttcctgaatcaaccgcaagatttgcggattctgc 194

                                                                       
Query: 458 ttccccagctcttgaagcattggctgtaggatttggggattagcctggaccaatgcaagc 517
           ||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 193 ttcccaagctcttgaagcattggctgcaagatttggggattagcctggaccaatgcaagc 134

                                                                       
Query: 518 agtgcttggaactgtggaagctgtcgcaatgcatcaagggcaccggcaccggcacccaca 577
           || ||||||||||||||||| ||||||||||||||||||||||| |||||||||||  ||
Sbjct: 133 agcgcttggaactgtggaagttgtcgcaatgcatcaagggcaccagcaccggcaccggca 74

                                                                       
Query: 578 c------cagcaccagcattggccccaccacttggaacaccctgtgggaaaaggtttaga 631
           |      ||||||||| ||| | |||| |||||||||  ||||| ||||| |||||||||
Sbjct: 73  ccagcagcagcaccaggatttgacccagcacttggaatgccctgggggaataggtttaga 14

                        
Query: 632 ggattcgcattag 644
           |||||||||||||
Sbjct: 13  ggattcgcattag 1



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>gb|AY108395.1| Zea mays PCO142081 mRNA sequence
          Length = 1776

 Score =  319 bits (161), Expect = 7e-84
 Identities = 392/469 (83%)
 Strand = Plus / Minus

                                                                        
Query: 179  tcaaactcgtggccatgatccaaaagatagttggcagccagttcttcatccctgttgcat 238
            |||||||||||||||||||| |  || |||||||| || || ||||| ||| ||||||||
Sbjct: 1349 tcaaactcgtggccatgatcaaggaggtagttggctgcaagctcttcgtccttgttgcat 1290

                                                                        
Query: 239  gcaaagaagacctccaacacaagctcacgattgaaccccattgactcaagccgctggatg 298
            |||||||| || || | |||||||||| | ||||| ||||||  ||||||||||||||||
Sbjct: 1289 gcaaagaaaacttctagcacaagctcatggttgaagcccattccctcaagccgctggatg 1230

                                                                        
Query: 299  gcctcccgttcttctggagtaacttgaactgcctgtggcatttgagctgccagtgcgcct 358
            ||||| ||||| ||||| ||||||   || |  || |||||   ||||||||||   |||
Sbjct: 1229 gcctctcgttcctctggggtaactgtcaccgattgcggcatagcagctgccagttgacct 1170

                                                                        
Query: 359  agtatatttccgccagcaccactctcaggtgtttcatttaccaggcggagaaactcagcc 418
            | ||| ||||| |||| ||||| ||| || ||||| || |||| ||||| ||||||||| 
Sbjct: 1169 aatatgtttcctccaggaccaccctccggagtttcgttcaccaagcggacaaactcagct 1110

                                                                        
Query: 419  tgattttcctgaatcaaccgcaggatctgtggattttgtttccccagctcttgaagcatt 478
            ||||||||||||||||| |||||||| ||||| |||||||| || || ||||||||||||
Sbjct: 1109 tgattttcctgaatcaaacgcaggatttgtgggttttgtttgcctagttcttgaagcatt 1050

                                                                        
Query: 479  ggctgtaggatttggggattagcctggaccaatgcaagcagtgcttggaactgtggaagc 538
            ||||| | |||||| |||||||||||||||||   |||||||||||| ||||||||||||
Sbjct: 1049 ggctgcaagatttgaggattagcctggaccaactgaagcagtgcttgaaactgtggaagc 990

                                                                        
Query: 539  tgtcgcaatgcatcaagggcaccggcaccggcacccacaccagcaccagcattggcccca 598
            |||||||| |||||||||||||| |  || ||| |   | || |||| | ||||||||||
Sbjct: 989  tgtcgcaaggcatcaagggcaccagatcctgcagctggaacaacacctggattggcccca 930

                                                             
Query: 599  ccacttggaacaccctgtgggaaaaggtttagaggattcgcattaggcc 647
            |||||||| |||||||| || |||||||| |||||||| ||||||||||
Sbjct: 929  ccacttgggacaccctgaggaaaaaggttcagaggatttgcattaggcc 881



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>gb|AY103604.1| Zea mays PCO142082 mRNA sequence
          Length = 1672

 Score =  311 bits (157), Expect = 2e-81
 Identities = 397/477 (83%)
 Strand = Plus / Minus

                                                                        
Query: 179  tcaaactcgtggccatgatccaaaagatagttggcagccagttcttcatccctgttgcat 238
            |||||||| |||||||||||||  || |||||||| |  || ||||| ||| ||||||||
Sbjct: 1331 tcaaactcatggccatgatccaggaggtagttggctgtaagctcttcgtccttgttgcat 1272

                                                                        
Query: 239  gcaaagaagacctccaacacaagctcacgattgaaccccattgactcaagccgctggatg 298
            |||||||| || || | |||||||||||| ||||||||||||  ||| ||||||||||| 
Sbjct: 1271 gcaaagaaaacttctagcacaagctcacggttgaaccccattccctcgagccgctggata 1212

                                                                        
Query: 299  gcctcccgttcttctggagtaacttgaactgcctgtggcatttgagctgccagtgcgcct 358
            ||||||||||| ||||| ||||||   |  |  |||||||    ||||||||||   |||
Sbjct: 1211 gcctcccgttcctctggggtaactgtcagcgtttgtggcacagcagctgccagttgacct 1152

                                                                        
Query: 359  agtatatttccgccagcaccactctcaggtgtttcatttaccaggcggagaaactcagcc 418
            ||||| || || |||| ||||| |||||| | |||||| |||| ||||||||||||||| 
Sbjct: 1151 agtatgttccctccaggaccaccctcaggagattcattcaccaagcggagaaactcagct 1092

                                                                        
Query: 419  tgattttcctgaatcaaccgcaggatctgtggattttgtttccccagctcttgaagcatt 478
            ||||||||||||||||||||||| || ||||| |||||||| || |||||||||||||||
Sbjct: 1091 tgattttcctgaatcaaccgcagaatttgtgggttttgtttacctagctcttgaagcatt 1032

                                                                        
Query: 479  ggctgtaggatttggggattagcctggaccaatgcaagcagtgcttggaactgtggaagc 538
            ||||| | |||||| |||||||||||||| ||   ||| |||||||| ||||||||||||
Sbjct: 1031 ggctgcaagatttgaggattagcctggactaactgaaggagtgcttgaaactgtggaagc 972

                                                                        
Query: 539  tgtcgcaatgcatcaagggcaccggcaccggcacccacaccagcaccagcattggcccca 598
            |||||||| |||||||| ||||| |  || |||||   | || |||| |  |||| ||||
Sbjct: 971  tgtcgcaaggcatcaagagcaccagatcctgcacctggaacaacacctgggttggaccca 912

                                                                     
Query: 599  ccacttggaacaccctgtgggaaaaggtttagaggattcgcattaggcccagcagag 655
            ||||||||||||||||| || |||||||| | |||||| ||||||||||| ||||||
Sbjct: 911  ccacttggaacaccctgaggaaaaaggttcaaaggatttgcattaggccctgcagag 855



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>gb|BT017634.1| Zea mays clone EL01N0437H07.c mRNA sequence
          Length = 819

 Score =  196 bits (99), Expect = 7e-47
 Identities = 189/219 (86%)
 Strand = Plus / Plus

                                                                       
Query: 343 agctgccagtgcgcctagtatatttccgccagcaccactctcaggtgtttcatttaccag 402
           ||||||||||   |||||||| || || |||| ||||| |||||| | |||||| |||| 
Sbjct: 377 agctgccagttgacctagtatgttccctccaggaccaccctcaggagattcattcaccaa 436

                                                                       
Query: 403 gcggagaaactcagcctgattttcctgaatcaaccgcaggatctgtggattttgtttccc 462
           ||||||||||||||| ||||||||||||||||||||||  || || || |||||||| ||
Sbjct: 437 gcggagaaactcagcttgattttcctgaatcaaccgcaaaatttgggggttttgtttacc 496

                                                                       
Query: 463 cagctcttgaagcattggctgtaggatttggggattagcctggaccaatgcaagcagtgc 522
            |||||||||||||||||||| | |||||| |||||||||||||| ||   ||| |||||
Sbjct: 497 tagctcttgaagcattggctgcaagatttgaggattagcctggactaactgaaggagtgc 556

                                                  
Query: 523 ttggaactgtggaagctgtcgcaatgcatcaagggcacc 561
           ||| |||||||||||||||||||| ||||||||||||||
Sbjct: 557 ttgaaactgtggaagctgtcgcaaggcatcaagggcacc 595



 Score =  111 bits (56), Expect = 3e-21
 Identities = 122/144 (84%)
 Strand = Plus / Plus

                                                                       
Query: 179 tcaaactcgtggccatgatccaaaagatagttggcagccagttcttcatccctgttgcat 238
           |||||||| ||||| |||||||||||  ||||||| |  || ||||| ||| ||||||||
Sbjct: 213 tcaaactcatggccgtgatccaaaagggagttggctgtaagctcttcgtccttgttgcat 272

                                                                       
Query: 239 gcaaagaagacctccaacacaagctcacgattgaaccccattgactcaagccgctggatg 298
           |||||||| || || | ||||||||||||  |||||||||||  ||| ||||||||||| 
Sbjct: 273 gcaaagaaaacttctagcacaagctcacgggtgaaccccattccctcgagccgctggata 332

                                   
Query: 299 gcctcccgttcttctggagtaact 322
           ||||||||||| ||||| ||||||
Sbjct: 333 gcctcccgttcctctggggtaact 356



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 59/66 (89%)
 Strand = Plus / Plus

                                                                       
Query: 590 ttggccccaccacttggaacaccctgtgggaaaaggtttagaggattcgcattaggccca 649
           |||| ||||||||||||||||||||| || |||||||| | |||||| ||||||||||| 
Sbjct: 624 ttggacccaccacttggaacaccctgaggaaaaaggttcaaaggatttgcattaggccct 683

                 
Query: 650 gcagag 655
           ||||||
Sbjct: 684 gcagag 689



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  168 bits (85), Expect = 2e-38
 Identities = 112/121 (92%)
 Strand = Plus / Minus

                                                                           
Query: 161     aacatctattgttgttcctcaaactcgtggccatgatccaaaagatagttggcagccagt 220
               |||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||| 
Sbjct: 8737228 aacacctattgttgatcctcaaactcatggccatgatccaaaagatagttggcagccagc 8737169

                                                                           
Query: 221     tcttcatccctgttgcatgcaaagaagacctccaacacaagctcacgattgaaccccatt 280
               ||||||||| |||||||||| |||||||||||||| || |||||||| ||||||||||||
Sbjct: 8737168 tcttcatccttgttgcatgcgaagaagacctccaaaacgagctcacggttgaaccccatt 8737109

                
Query: 281     g 281
               |
Sbjct: 8737108 g 8737108



 Score =  115 bits (58), Expect = 2e-22
 Identities = 85/94 (90%)
 Strand = Plus / Minus

                                                                           
Query: 391     ttcatttaccaggcggagaaactcagcctgattttcctgaatcaaccgcaggatctgtgg 450
               |||||| ||||| |||||||| |||||||||||||||||||||||||||| ||| || ||
Sbjct: 8736536 ttcattcaccagacggagaaattcagcctgattttcctgaatcaaccgcaagatttgcgg 8736477

                                                 
Query: 451     attttgtttccccagctcttgaagcattggctgt 484
               ||| || ||||| |||||||||||||||||||||
Sbjct: 8736476 attctgcttcccaagctcttgaagcattggctgt 8736443



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 89/103 (86%), Gaps = 3/103 (2%)
 Strand = Plus / Minus

                                                                           
Query: 612     cctgtgggaaaaggtttagaggattcgcattaggcccagcagagacaccaccagatggct 671
               |||| ||||| ||||||||||||||||||||||| || |   || ||||||||| |||||
Sbjct: 8735507 cctgggggaataggtttagaggattcgcattaggtcctg---aggcaccaccagctggct 8735451

                                                          
Query: 672     gcactgccggtagaggtgcagcctgagcctgggatggagcctg 714
               |||| | |||| ||||||||||||||||||| |||||| ||||
Sbjct: 8735450 gcacaggcggtggaggtgcagcctgagcctgagatggaacctg 8735408



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 44/45 (97%)
 Strand = Plus / Minus

                                                            
Query: 487     gatttggggattagcctggaccaatgcaagcagtgcttggaactg 531
               ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 8736325 gatttggggattagcctggaccaatgcaagcagcgcttggaactg 8736281



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 56/61 (91%)
 Strand = Plus / Minus

                                                                           
Query: 529     ctgtggaagctgtcgcaatgcatcaagggcaccggcaccggcacccacaccagcaccagc 588
               ||||||||| ||||||||||||||||||||||| |||||||||||  |||||||| ||||
Sbjct: 8736202 ctgtggaagttgtcgcaatgcatcaagggcaccagcaccggcaccggcaccagcagcagc 8736143

                
Query: 589     a 589
               |
Sbjct: 8736142 a 8736142



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                  
Query: 289     ccgctggatggcctcccgttcttctggagtaacttgaactgcctgtggcat 339
               |||||| |||||||||||||| ||||||||||||  || ||||||||||||
Sbjct: 8736733 ccgctgaatggcctcccgttcctctggagtaactgtaagtgcctgtggcat 8736683



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>dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OJ1001_B06
          Length = 134810

 Score =  168 bits (85), Expect = 2e-38
 Identities = 112/121 (92%)
 Strand = Plus / Minus

                                                                        
Query: 161  aacatctattgttgttcctcaaactcgtggccatgatccaaaagatagttggcagccagt 220
            |||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||| 
Sbjct: 7549 aacacctattgttgatcctcaaactcatggccatgatccaaaagatagttggcagccagc 7490

                                                                        
Query: 221  tcttcatccctgttgcatgcaaagaagacctccaacacaagctcacgattgaaccccatt 280
            ||||||||| |||||||||| |||||||||||||| || |||||||| ||||||||||||
Sbjct: 7489 tcttcatccttgttgcatgcgaagaagacctccaaaacgagctcacggttgaaccccatt 7430

             
Query: 281  g 281
            |
Sbjct: 7429 g 7429



 Score =  115 bits (58), Expect = 2e-22
 Identities = 85/94 (90%)
 Strand = Plus / Minus

                                                                        
Query: 391  ttcatttaccaggcggagaaactcagcctgattttcctgaatcaaccgcaggatctgtgg 450
            |||||| ||||| |||||||| |||||||||||||||||||||||||||| ||| || ||
Sbjct: 6857 ttcattcaccagacggagaaattcagcctgattttcctgaatcaaccgcaagatttgcgg 6798

                                              
Query: 451  attttgtttccccagctcttgaagcattggctgt 484
            ||| || ||||| |||||||||||||||||||||
Sbjct: 6797 attctgcttcccaagctcttgaagcattggctgt 6764



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 89/103 (86%), Gaps = 3/103 (2%)
 Strand = Plus / Minus

                                                                        
Query: 612  cctgtgggaaaaggtttagaggattcgcattaggcccagcagagacaccaccagatggct 671
            |||| ||||| ||||||||||||||||||||||| || |   || ||||||||| |||||
Sbjct: 5828 cctgggggaataggtttagaggattcgcattaggtcctg---aggcaccaccagctggct 5772

                                                       
Query: 672  gcactgccggtagaggtgcagcctgagcctgggatggagcctg 714
            |||| | |||| ||||||||||||||||||| |||||| ||||
Sbjct: 5771 gcacaggcggtggaggtgcagcctgagcctgagatggaacctg 5729



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 44/45 (97%)
 Strand = Plus / Minus

                                                         
Query: 487  gatttggggattagcctggaccaatgcaagcagtgcttggaactg 531
            ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 6646 gatttggggattagcctggaccaatgcaagcagcgcttggaactg 6602



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 56/61 (91%)
 Strand = Plus / Minus

                                                                        
Query: 529  ctgtggaagctgtcgcaatgcatcaagggcaccggcaccggcacccacaccagcaccagc 588
            ||||||||| ||||||||||||||||||||||| |||||||||||  |||||||| ||||
Sbjct: 6523 ctgtggaagttgtcgcaatgcatcaagggcaccagcaccggcaccggcaccagcagcagc 6464

             
Query: 589  a 589
            |
Sbjct: 6463 a 6463



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                               
Query: 289  ccgctggatggcctcccgttcttctggagtaacttgaactgcctgtggcat 339
            |||||| |||||||||||||| ||||||||||||  || ||||||||||||
Sbjct: 7054 ccgctgaatggcctcccgttcctctggagtaactgtaagtgcctgtggcat 7004



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>dbj|AP004993.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0037N01
          Length = 174085

 Score =  168 bits (85), Expect = 2e-38
 Identities = 112/121 (92%)
 Strand = Plus / Minus

                                                                          
Query: 161    aacatctattgttgttcctcaaactcgtggccatgatccaaaagatagttggcagccagt 220
              |||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||| 
Sbjct: 152210 aacacctattgttgatcctcaaactcatggccatgatccaaaagatagttggcagccagc 152151

                                                                          
Query: 221    tcttcatccctgttgcatgcaaagaagacctccaacacaagctcacgattgaaccccatt 280
              ||||||||| |||||||||| |||||||||||||| || |||||||| ||||||||||||
Sbjct: 152150 tcttcatccttgttgcatgcgaagaagacctccaaaacgagctcacggttgaaccccatt 152091

               
Query: 281    g 281
              |
Sbjct: 152090 g 152090



 Score =  115 bits (58), Expect = 2e-22
 Identities = 85/94 (90%)
 Strand = Plus / Minus

                                                                          
Query: 391    ttcatttaccaggcggagaaactcagcctgattttcctgaatcaaccgcaggatctgtgg 450
              |||||| ||||| |||||||| |||||||||||||||||||||||||||| ||| || ||
Sbjct: 151518 ttcattcaccagacggagaaattcagcctgattttcctgaatcaaccgcaagatttgcgg 151459

                                                
Query: 451    attttgtttccccagctcttgaagcattggctgt 484
              ||| || ||||| |||||||||||||||||||||
Sbjct: 151458 attctgcttcccaagctcttgaagcattggctgt 151425



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 89/103 (86%), Gaps = 3/103 (2%)
 Strand = Plus / Minus

                                                                          
Query: 612    cctgtgggaaaaggtttagaggattcgcattaggcccagcagagacaccaccagatggct 671
              |||| ||||| ||||||||||||||||||||||| || |   || ||||||||| |||||
Sbjct: 150489 cctgggggaataggtttagaggattcgcattaggtcctg---aggcaccaccagctggct 150433

                                                         
Query: 672    gcactgccggtagaggtgcagcctgagcctgggatggagcctg 714
              |||| | |||| ||||||||||||||||||| |||||| ||||
Sbjct: 150432 gcacaggcggtggaggtgcagcctgagcctgagatggaacctg 150390



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 44/45 (97%)
 Strand = Plus / Minus

                                                           
Query: 487    gatttggggattagcctggaccaatgcaagcagtgcttggaactg 531
              ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 151307 gatttggggattagcctggaccaatgcaagcagcgcttggaactg 151263



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 56/61 (91%)
 Strand = Plus / Minus

                                                                          
Query: 529    ctgtggaagctgtcgcaatgcatcaagggcaccggcaccggcacccacaccagcaccagc 588
              ||||||||| ||||||||||||||||||||||| |||||||||||  |||||||| ||||
Sbjct: 151184 ctgtggaagttgtcgcaatgcatcaagggcaccagcaccggcaccggcaccagcagcagc 151125

               
Query: 589    a 589
              |
Sbjct: 151124 a 151124



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                 
Query: 289    ccgctggatggcctcccgttcttctggagtaacttgaactgcctgtggcat 339
              |||||| |||||||||||||| ||||||||||||  || ||||||||||||
Sbjct: 151715 ccgctgaatggcctcccgttcctctggagtaactgtaagtgcctgtggcat 151665



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>ref|XM_482516.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1526

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 87/101 (86%)
 Strand = Plus / Minus

                                                                        
Query: 410  aactcagcctgattttcctgaatcaaccgcaggatctgtggattttgtttccccagctct 469
            ||||||||||| |||||||||||||   |||  |||||||||||||||||||||| ||||
Sbjct: 1029 aactcagcctggttttcctgaatcagttgcaaaatctgtggattttgtttccccaactct 970

                                                     
Query: 470  tgaagcattggctgtaggatttggggattagcctggaccaa 510
            |||||||  ||||| || ||||| || |||||||| |||||
Sbjct: 969  tgaagcaaaggctgcagaatttgagggttagcctgcaccaa 929



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>dbj|AK064881.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000J24, full
            insert sequence
          Length = 1526

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 87/101 (86%)
 Strand = Plus / Minus

                                                                        
Query: 410  aactcagcctgattttcctgaatcaaccgcaggatctgtggattttgtttccccagctct 469
            ||||||||||| |||||||||||||   |||  |||||||||||||||||||||| ||||
Sbjct: 1029 aactcagcctggttttcctgaatcagttgcaaaatctgtggattttgtttccccaactct 970

                                                     
Query: 470  tgaagcattggctgtaggatttggggattagcctggaccaa 510
            |||||||  ||||| || ||||| || |||||||| |||||
Sbjct: 969  tgaagcaaaggctgcagaatttgagggttagcctgcaccaa 929



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 60/67 (89%)
 Strand = Plus / Minus

                                                                            
Query: 410      aactcagcctgattttcctgaatcaaccgcaggatctgtggattttgtttccccagctct 469
                ||||||||||| |||||||||||||   |||  |||||||||||||||||||||| ||||
Sbjct: 20793697 aactcagcctggttttcctgaatcagttgcaaaatctgtggattttgtttccccaactct 20793638

                       
Query: 470      tgaagca 476
                |||||||
Sbjct: 20793637 tgaagca 20793631



 Score = 48.1 bits (24), Expect = 0.042
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 673     cactgccggtagaggtgcagcctgagcc 700
               ||||||||||||| ||||||||||||||
Sbjct: 5549427 cactgccggtagacgtgcagcctgagcc 5549454



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>dbj|AP003881.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1124_B05
          Length = 109917

 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 60/67 (89%)
 Strand = Plus / Minus

                                                                         
Query: 410   aactcagcctgattttcctgaatcaaccgcaggatctgtggattttgtttccccagctct 469
             ||||||||||| |||||||||||||   |||  |||||||||||||||||||||| ||||
Sbjct: 24830 aactcagcctggttttcctgaatcagttgcaaaatctgtggattttgtttccccaactct 24771

                    
Query: 470   tgaagca 476
             |||||||
Sbjct: 24770 tgaagca 24764



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>dbj|AK063768.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B09, full
           insert sequence
          Length = 621

 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 60/67 (89%)
 Strand = Plus / Minus

                                                                       
Query: 410 aactcagcctgattttcctgaatcaaccgcaggatctgtggattttgtttccccagctct 469
           ||||||||||| |||||||||||||   |||  |||||||||||||||||||||| ||||
Sbjct: 70  aactcagcctggttttcctgaatcagttgcaaaatctgtggattttgtttccccaactct 11

                  
Query: 470 tgaagca 476
           |||||||
Sbjct: 10  tgaagca 4



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>dbj|AK103728.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138E11, full
           insert sequence
          Length = 2031

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 80/94 (85%)
 Strand = Plus / Minus

                                                                       
Query: 405 ggagaaactcagcctgattttcctgaatcaaccgcaggatctgtggattttgtttcccca 464
           |||| |||||||| || ||||||||||||| | |||  ||||| ||||||||||||||||
Sbjct: 997 ggaggaactcagcttggttttcctgaatcagctgcaaaatctggggattttgtttcccca 938

                                             
Query: 465 gctcttgaagcattggctgtaggatttggggatt 498
             |||||||||| ||||||||  ||||| |||||
Sbjct: 937 attcttgaagcaatggctgtaaaatttgaggatt 904



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>dbj|AK103130.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119P16, full
           insert sequence
          Length = 1513

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 80/94 (85%)
 Strand = Plus / Minus

                                                                       
Query: 405 ggagaaactcagcctgattttcctgaatcaaccgcaggatctgtggattttgtttcccca 464
           |||| |||||||| || ||||||||||||| | |||  ||||| ||||||||||||||||
Sbjct: 997 ggaggaactcagcttggttttcctgaatcagctgcaaaatctggggattttgtttcccca 938

                                             
Query: 465 gctcttgaagcattggctgtaggatttggggatt 498
             |||||||||| ||||||||  ||||| |||||
Sbjct: 937 attcttgaagcaatggctgtaaaatttgaggatt 904



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>gb|U63530.1|OSU63530 Oryza sativa osRAD23 mRNA, complete cds
          Length = 1533

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 80/94 (85%)
 Strand = Plus / Minus

                                                                       
Query: 405 ggagaaactcagcctgattttcctgaatcaaccgcaggatctgtggattttgtttcccca 464
           |||| |||||||| || ||||||||||||| | |||  ||||| ||||||||||||||||
Sbjct: 991 ggaggaactcagcttggttttcctgaatcagctgcaaaatctggggattttgtttcccca 932

                                             
Query: 465 gctcttgaagcattggctgtaggatttggggatt 498
             |||||||||| ||||||||  ||||| |||||
Sbjct: 931 attcttgaagcaatggctgtaaaatttgaggatt 898



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                            
Query: 405      ggagaaactcagcctgattttcctgaatcaaccgcaggatctgtggattttgtttcccca 464
                |||| |||||||| || ||||||||||||| | |||  ||||| ||||||||||||||||
Sbjct: 14311582 ggaggaactcagcttggttttcctgaatcagctgcaaaatctggggattttgtttcccca 14311523

                                   
Query: 465      gctcttgaagcattggctg 483
                  |||||||||| ||||||
Sbjct: 14311522 attcttgaagcaatggctg 14311504



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>dbj|AP005722.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1261_A08
          Length = 162113

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                          
Query: 405    ggagaaactcagcctgattttcctgaatcaaccgcaggatctgtggattttgtttcccca 464
              |||| |||||||| || ||||||||||||| | |||  ||||| ||||||||||||||||
Sbjct: 128127 ggaggaactcagcttggttttcctgaatcagctgcaaaatctggggattttgtttcccca 128068

                                 
Query: 465    gctcttgaagcattggctg 483
                |||||||||| ||||||
Sbjct: 128067 attcttgaagcaatggctg 128049



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>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
            clone:P0465E03
          Length = 151206

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                        
Query: 405  ggagaaactcagcctgattttcctgaatcaaccgcaggatctgtggattttgtttcccca 464
            |||| |||||||| || ||||||||||||| | |||  ||||| ||||||||||||||||
Sbjct: 3385 ggaggaactcagcttggttttcctgaatcagctgcaaaatctggggattttgtttcccca 3326

                               
Query: 465  gctcttgaagcattggctg 483
              |||||||||| ||||||
Sbjct: 3325 attcttgaagcaatggctg 3307



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>ref|XM_752001.1| Ustilago maydis 521 hypothetical protein (UM00947.1) partial mRNA
          Length = 2946

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 555  gggcaccggcaccggcacccacaccagcaccagca 589
            |||||||||||||||||||  ||||||||||||||
Sbjct: 2161 gggcaccggcaccggcaccagcaccagcaccagca 2127



 Score = 44.1 bits (22), Expect = 0.66
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 556  ggcaccggcaccggcacccacaccagcaccagca 589
            |||||||||||| |||||  ||||||||||||||
Sbjct: 2154 ggcaccggcaccagcaccagcaccagcaccagca 2121



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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                 
Query: 556     ggcaccggcaccggcacccacaccagcaccagca 589
               ||||||||||||||||||  ||||||||||||||
Sbjct: 1038193 ggcaccggcaccggcaccagcaccagcaccagca 1038160



 Score = 44.1 bits (22), Expect = 0.66
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 560     ccggcaccggcacccacaccagcaccagca 589
               ||||||||||||||  ||||||||||||||
Sbjct: 1038195 ccggcaccggcaccggcaccagcaccagca 1038166



 Score = 44.1 bits (22), Expect = 0.66
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 556     ggcaccggcaccggcacccacaccagcaccagca 589
               |||||||||||| |||||  ||||||||||||||
Sbjct: 1038187 ggcaccggcaccagcaccagcaccagcaccagca 1038154



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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                
Query: 556    ggcaccggcaccggcacccacaccagcaccagca 589
              ||||||||||||||||||  ||||||||||||||
Sbjct: 868350 ggcaccggcaccggcaccagcaccagcaccagca 868383



 Score = 44.1 bits (22), Expect = 0.66
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 556    ggcaccggcaccggcacccacaccagcaccagca 589
              |||||||||||| |||||  ||||||||||||||
Sbjct: 868356 ggcaccggcaccagcaccagcaccagcaccagca 868389



 Score = 44.1 bits (22), Expect = 0.66
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 560    ccggcaccggcacccacaccagcaccagca 589
              ||||||||||||||  ||||||||||||||
Sbjct: 868348 ccggcaccggcaccggcaccagcaccagca 868377



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>gb|AC097674.6| Rattus norvegicus 2 CH230-75D18 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 227596

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                
Query: 556    ggcaccggcaccggcacccacaccagcaccagca 589
              ||||||||||||||||||  ||||||||||||||
Sbjct: 188638 ggcaccggcaccggcaccggcaccagcaccagca 188671



 Score = 46.1 bits (23), Expect = 0.17
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 556    ggcaccggcaccggcacccacaccagcacca 586
              ||||||||||||||||||  |||||||||||
Sbjct: 188644 ggcaccggcaccggcaccagcaccagcacca 188674



 Score = 44.1 bits (22), Expect = 0.66
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 556    ggcaccggcaccggcacccacaccagcaccagca 589
              ||||||||||||||||||  |||| |||||||||
Sbjct: 188632 ggcaccggcaccggcaccggcaccggcaccagca 188665



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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                
Query: 556    ggcaccggcaccggcacccacaccagcaccagca 589
              ||||||||||||||||||  ||||||||||||||
Sbjct: 631945 ggcaccggcaccggcaccggcaccagcaccagca 631912



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                
Query: 556    ggcaccggcaccggcacccacaccagcaccagca 589
              ||||||||||||||||||  ||||||||||||||
Sbjct: 631939 ggcaccggcaccggcaccagcaccagcaccagca 631906



 Score = 44.1 bits (22), Expect = 0.66
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 556    ggcaccggcaccggcacccacaccagcaccagca 589
              ||||||||||||||||||  |||| |||||||||
Sbjct: 631951 ggcaccggcaccggcaccggcaccggcaccagca 631918



 Score = 44.1 bits (22), Expect = 0.66
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 556    ggcaccggcaccggcacccacaccagcaccagca 589
              |||||||||||| |||||  ||||||||||||||
Sbjct: 631933 ggcaccggcaccagcaccagcaccagcaccagca 631900



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>gb|AY609404.1| Sus scrofa clone Clu_10503.scr.msk.p1.Contig5, mRNA sequence
          Length = 1921

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 556 ggcaccggcaccggcacccacaccagcaccagca 589
           ||||||||||||||||||  ||||||||||||||
Sbjct: 327 ggcaccggcaccggcaccggcaccagcaccagca 360



 Score = 44.1 bits (22), Expect = 0.66
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 556 ggcaccggcaccggcacccacaccagcaccagca 589
           ||||||||||||||||||  |||| |||||||||
Sbjct: 321 ggcaccggcaccggcaccggcaccggcaccagca 354



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>ref|XM_364590.1| Magnaporthe grisea 70-15 hypothetical protein (MG09336.4) partial
            mRNA
          Length = 4695

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 561  cggcaccggcacccacaccagcaccagca 589
            ||||||||||||| |||||||||||||||
Sbjct: 1391 cggcaccggcaccaacaccagcaccagca 1419



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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                
Query: 557     gcaccggcaccggcacccacaccagcaccagca 589
               |||||||||||||||||  ||||||||||||||
Sbjct: 2134681 gcaccggcaccggcaccagcaccagcaccagca 2134649



 Score = 44.1 bits (22), Expect = 0.66
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 556     ggcaccggcaccggcacccacaccagcaccagca 589
               |||||||||||| |||||  ||||||||||||||
Sbjct: 2134676 ggcaccggcaccagcaccagcaccagcaccagca 2134643



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 557     gcaccggcaccggcacccacaccagcaccagca 589
               ||||||||||| |||||  ||||||||||||||
Sbjct: 2134711 gcaccggcaccagcaccagcaccagcaccagca 2134679



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 557     gcaccggcaccggcacccacaccagcaccagca 589
               ||||| |||||||||||  ||||||||||||||
Sbjct: 2134687 gcaccagcaccggcaccggcaccagcaccagca 2134655



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>gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence
          Length = 141360

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                   
Query: 202    aagatagttggcagccagttcttcatccctgttgcatgcaaagaagacctcca 254
              |||||||||||||||||| || || | | |||||||||| ||||| |||||||
Sbjct: 128966 aagatagttggcagccagctcctcgttcttgttgcatgcgaagaacacctcca 129018



 Score = 48.1 bits (24), Expect = 0.042
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                      
Query: 445    ctgtggattttgtttccccagctcttgaagcattggctgt 484
              |||||||||||| ||||||||||| || ||||| ||||||
Sbjct: 129395 ctgtggattttgcttccccagctcctgtagcataggctgt 129434



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>ref|XM_480516.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 282

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 673 cactgccggtagaggtgcagcctgagcc 700
           ||||||||||||| ||||||||||||||
Sbjct: 131 cactgccggtagacgtgcagcctgagcc 158



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>dbj|AP005499.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0412D08
          Length = 150188

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 673  cactgccggtagaggtgcagcctgagcc 700
            ||||||||||||| ||||||||||||||
Sbjct: 4803 cactgccggtagacgtgcagcctgagcc 4830



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>dbj|AP004746.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0035F08
          Length = 167446

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 673   cactgccggtagaggtgcagcctgagcc 700
             ||||||||||||| ||||||||||||||
Sbjct: 75655 cactgccggtagacgtgcagcctgagcc 75682



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>gb|AY107093.1| Zea mays PCO127836 mRNA sequence
          Length = 504

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 555 gggcaccggcaccggcacccacaccagcacca 586
           |||||||||||||||||||  |||||||||||
Sbjct: 354 gggcaccggcaccggcaccagcaccagcacca 323



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>gb|AC120496.2| Genomic sequence for Sorghum bicolor, clone SBBBc0267M07, complete
              sequence
          Length = 120132

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                 
Query: 449    ggattttgtttccccagctcttgaagcattggctg 483
              ||||||||||||||||  |||||||||| ||||||
Sbjct: 108144 ggattttgtttccccaattcttgaagcaatggctg 108178



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>gb|AC155270.3| Mus musculus BAC clone RP23-195H19 from chromosome 12, complete sequence
          Length = 215502

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 556    ggcaccggcaccggcacccacaccagcacca 586
              ||||||||||||||||||  |||||||||||
Sbjct: 108888 ggcaccggcaccggcaccggcaccagcacca 108858



 Score = 44.1 bits (22), Expect = 0.66
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 556    ggcaccggcaccggcacccacaccagcaccagca 589
              ||||||||||||||||||  |||| |||||||||
Sbjct: 108894 ggcaccggcaccggcaccggcaccggcaccagca 108861



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>emb|BX324153.4| Zebrafish DNA sequence from clone CH211-160M3 in linkage group 7,
             complete sequence
          Length = 95870

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 173   tgttcctcaaactcgtggccatg 195
             |||||||||||||||||||||||
Sbjct: 18296 tgttcctcaaactcgtggccatg 18318



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>ref|XM_678316.1| PREDICTED: Danio rerio similar to gonadotropin-releasing hormone
           receptor (LOC555723), mRNA
          Length = 1281

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 173 tgttcctcaaactcgtggccatg 195
           |||||||||||||||||||||||
Sbjct: 362 tgttcctcaaactcgtggccatg 384



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>gb|AY108301.1| Zea mays PCO104381 mRNA sequence
          Length = 1521

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                        
Query: 449  ggattttgtttccccagctcttgaagcattggctgtaggatttggggattagcctggacc 508
            ||||||||||| ||||  |||||||||| |||||| |  || || ||||||||||| |||
Sbjct: 1006 ggattttgtttacccaattcttgaagcaatggctgcaaaatctgaggattagcctgcacc 947

                       
Query: 509  aatgcaagcag 519
            ||  |||||||
Sbjct: 946  aaaccaagcag 936



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>gb|AC158383.3| Mus musculus BAC clone RP23-135O16 from chromosome 12, complete
            sequence
          Length = 196552

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 556  ggcaccggcaccggcacccacaccagcacca 586
            ||||||||||||||||||  |||||||||||
Sbjct: 8326 ggcaccggcaccggcaccggcaccagcacca 8356



 Score = 44.1 bits (22), Expect = 0.66
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                              
Query: 556  ggcaccggcaccggcacccacaccagcaccagca 589
            ||||||||||||||||||  |||| |||||||||
Sbjct: 8320 ggcaccggcaccggcaccggcaccggcaccagca 8353



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>gb|AC129945.9| Mus musculus chromosome 3, clone RP24-512A14, complete sequence
          Length = 153430

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 556    ggcaccggcaccggcacccacaccagcaccagca 589
              |||||||||||||||||   ||||||||||||||
Sbjct: 124409 ggcaccggcaccggcactagcaccagcaccagca 124376



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 557    gcaccggcaccggcacccacaccagcaccagca 589
              |||||||||||||||||  ||| ||||||||||
Sbjct: 124414 gcaccggcaccggcaccggcactagcaccagca 124382



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>ref|XM_360477.1| Magnaporthe grisea 70-15 predicted protein (MG10789.4) partial mRNA
          Length = 933

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 557 gcaccggcaccggcacccacaccagcacca 586
           |||||||||||||||||| |||| ||||||
Sbjct: 256 gcaccggcaccggcacccgcacccgcacca 285



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>ref|XM_365030.1| Magnaporthe grisea 70-15 hypothetical protein (MG09875.4) partial
           mRNA
          Length = 828

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 556 ggcaccggcaccggcacccacaccagcaccagca 589
           ||||||||||||||| ||  ||||||||||||||
Sbjct: 654 ggcaccggcaccggctccggcaccagcaccagca 621



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 556 ggcaccggcaccggcacccacaccagcaccagc 588
           ||||||||| ||||||||  |||||||||||||
Sbjct: 648 ggcaccggctccggcaccagcaccagcaccagc 616



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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 556     ggcaccggcaccggcacccacaccagcacc 585
               ||||||||||||||||||| |||| |||||
Sbjct: 1993118 ggcaccggcaccggcacccgcacccgcacc 1993089



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>emb|AL121938.10|HSDJ167O5 Human DNA sequence from clone RP1-167O5 on chromosome 6q22.1-23.3
             Contains the 3' end of the TPD52L1 gene encoding two
             variants of tumor protein D52-like 1 protein, the gene for
             CGI-130 protein and a CpG island, complete sequence
          Length = 156054

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 472   aagcattggctgtaggatttggggat 497
             ||||||||||| ||||||||||||||
Sbjct: 33386 aagcattggctttaggatttggggat 33411



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>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29
          Length = 292100

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 556    ggcaccggcaccggcacccaca 577
              ||||||||||||||||||||||
Sbjct: 173742 ggcaccggcaccggcacccaca 173721



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>gb|AY106748.1| Zea mays PCO104379 mRNA sequence
          Length = 779

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                       
Query: 449 ggattttgtttccccagctcttgaagcattggctgtaggatttggggattagcctggacc 508
           ||||||||||||| ||  |||||||||| |||||| |  ||||| || |||||||| |||
Sbjct: 260 ggattttgtttcctcaattcttgaagcaatggctgcaaaatttgagggttagcctgaacc 201

             
Query: 509 aa 510
           ||
Sbjct: 200 aa 199



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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 557     gcaccggcaccggcacccacaccagcacc 585
               |||||||||||||||||| |||| |||||
Sbjct: 1157751 gcaccggcaccggcacccgcaccggcacc 1157723



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>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete
               sequence
          Length = 1194300

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 569     gcacccacaccagcaccagca 589
               |||||||||||||||||||||
Sbjct: 1164534 gcacccacaccagcaccagca 1164514



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>gb|AC138654.4| Mus musculus BAC clone RP23-344O11 from chromosome 5, complete sequence
          Length = 198036

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 691   agcctgagcctgggatggagcctgc 715
             |||||||||| ||||||||||||||
Sbjct: 59009 agcctgagccagggatggagcctgc 58985



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>gb|DQ415922.1| Cleome spinosa clone BAC Cs1, complete sequence
          Length = 146078

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                       
Query: 202    aagatagttggcagccagttcttcatccctgttgcatgcaaagaagacctccaacac 258
              ||||||||| |||||||  ||||| | | ||||||| || ||||| |||||||||||
Sbjct: 128332 aagatagttagcagccaactcttcgttcttgttgcacgcgaagaacacctccaacac 128388



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>ref|XM_572203.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
            (CNH00090) partial mRNA
          Length = 5123

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 569  gcacccacaccagcaccagca 589
            |||||||||||||||||||||
Sbjct: 2613 gcacccacaccagcaccagca 2633



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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 556     ggcaccggcaccggcacccacaccagcaccagc 588
               ||||||||||||||||||  | |||||||||||
Sbjct: 1484554 ggcaccggcaccggcaccagcgccagcaccagc 1484586



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 557     gcaccggcaccggcacccacaccagcaccagca 589
               |||||||||||||||||  ||||||| ||||||
Sbjct: 1484549 gcaccggcaccggcaccggcaccagcgccagca 1484581



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>ref|XM_503441.1| Yarrowia lipolytica CLIB122, YALI0E02024g predicted mRNA
          Length = 3375

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 557  gcaccggcaccggcacccacaccagcaccagca 589
            ||||| ||||| ||||| |||||||||||||||
Sbjct: 1544 gcaccagcaccagcaccgacaccagcaccagca 1512



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>emb|BX295540.1|NC49D12 Neurospora crassa DNA linkage group VI Cosmid contig 49D12
          Length = 95032

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 556   ggcaccggcaccggcacccacaccagcaccagc 588
             ||||||||||||||||||  |||| ||||||||
Sbjct: 64703 ggcaccggcaccggcaccggcaccggcaccagc 64735



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>emb|AL954258.2| Pan troglodytes chromosome 22 clone PTB-146D01 map 22q22.3, complete
             sequence
          Length = 185080

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 558   caccggcaccggcacccacaccagcacca 586
             |||| |||||| |||||||||||||||||
Sbjct: 61617 caccagcaccgccacccacaccagcacca 61589



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 558   caccggcaccggcacccacaccagcacca 586
             |||| |||||| |||||||||||||||||
Sbjct: 61509 caccagcaccgccacccacaccagcacca 61481



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 558   caccggcaccggcacccacaccagcacca 586
             |||| |||||| |||||||||||||||||
Sbjct: 60070 caccagcaccgccacccacaccagcacca 60042



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>emb|AL116512.1|CNS01D8O Botrytis cinerea strain T4 cDNA library
          Length = 720

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 207 agttggcagccagttcttcatccctgttgcatgcaaa 243
           |||||||||||| |||||||| | ||| |||||||||
Sbjct: 352 agttggcagccaattcttcattcttgtcgcatgcaaa 316



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>gb|AF190427.1|AF190427 Colletotrichum lindemuthianum putative GAL4-like transcriptional
            activator (CLTA1) gene, complete cds
          Length = 4130

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 569  gcacccacaccagcaccagca 589
            |||||||||||||||||||||
Sbjct: 3654 gcacccacaccagcaccagca 3674



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>gb|AF226688.1|AF226688 Bombyx mori fibroin heavy chain Fib-H (fib-H) gene, complete cds
          Length = 80009

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 557   gcaccggcaccggcacccacaccagcaccagca 589
             ||||| |||||||||||  ||||||||||||||
Sbjct: 78707 gcaccagcaccggcaccagcaccagcaccagca 78675



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>emb|AL163302.2|HS21C102 Homo sapiens chromosome 21 segment HS21C102
          Length = 340000

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 558    caccggcaccggcacccacaccagcacca 586
              |||| |||||| |||||||||||||||||
Sbjct: 141765 caccagcaccgccacccacaccagcacca 141737



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>emb|BX322563.1|HSQ21G24 Homo sapiens chromosome 21 from cosmid LL21NC02-21G24 map 21q22.3
             region D21S171-LA161, complete sequence
          Length = 38665

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 558   caccggcaccggcacccacaccagcacca 586
             |||| |||||| |||||||||||||||||
Sbjct: 34470 caccagcaccgccacccacaccagcacca 34442



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>emb|BX322561.1|HSE12310 Homo sapiens chromosome 21 from PAC RPCI-1 RP1-310E12 map 21q22.3
            region D21S171-LA161, complete sequence
          Length = 131563

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 558  caccggcaccggcacccacaccagcacca 586
            |||| |||||| |||||||||||||||||
Sbjct: 2077 caccagcaccgccacccacaccagcacca 2049



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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia
              lipolytica
          Length = 4224103

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 557    gcaccggcaccggcacccacaccagcaccagca 589
              ||||| ||||| ||||| |||||||||||||||
Sbjct: 214270 gcaccagcaccagcaccgacaccagcaccagca 214238


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,675,111
Number of Sequences: 3902068
Number of extensions: 6675111
Number of successful extensions: 143933
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 143062
Number of HSP's gapped (non-prelim): 822
length of query: 750
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 727
effective length of database: 17,143,297,704
effective search space: 12463177430808
effective search space used: 12463177430808
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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