ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd27f07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY220734.1| Hordeum vulgare pathogenesis-related protein 10 (... 638 e-180
2dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 66 2e-07
3gb|AF274851.1|AF274851 Oryza sativa pathogenesis-related protein... 66 2e-07
4dbj|AK099157.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 2e-07
5dbj|AK070762.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 2e-07
6gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 66 2e-07
7emb|AL954871.5|CNS08CDA Oryza sativa chromosome 12, . BAC OSJNBb... 66 2e-07
8emb|AL845342.2|CNS08CB4 Oryza sativa chromosome 12, . BAC OSJNBa... 66 2e-07
9gb|AF274850.1|AF274850 Oryza sativa pathogenesis-related protein... 50 0.010
10dbj|AK071613.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.010
11dbj|D38170.1| Rice mRNA for probenazole-inducible protein PBZ1, ... 50 0.010
12dbj|D82066.1| Oryza sativa gene for PBZ1, complete cds 50 0.010
13gb|AY310323.1| Streptomyces sp. FR-008 heptaene macrolide comple... 44 0.59
14gb|AC122533.4| Mus musculus BAC clone RP24-538L1 from chromosome... 44 0.59
15dbj|AP003732.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 44 0.59
16gb|AC069218.13| Homo sapiens 3 BAC RP11-393N4 (Roswell Park Canc... 42 2.3
17gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 42 2.3
18gb|CP000249.1| Frankia sp. CcI3, complete genome 42 2.3
19gb|AC133781.4| Homo sapiens BAC clone RP11-756K13 from 2, comple... 42 2.3
20gb|AC114730.5| Homo sapiens BAC clone RP13-925E23 from 2, comple... 42 2.3
21dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 2.3
22ref|XM_481204.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.2
23ref|NM_002900.2| Homo sapiens retinol binding protein 3, interst... 40 9.2
24gb|AC158990.2| Mus musculus BAC clone RP23-416E18 from chromosom... 40 9.2
25gb|AC149779.3| Bos taurus BAC CH240-5F6 (Children's Hospital Oa... 40 9.2
26ref|XM_748110.1| Aspergillus fumigatus Af293 MFS monosaccharide ... 40 9.2
27gb|AC144508.3| Mus musculus BAC clone RP24-152C23 from chromosom... 40 9.2
28gb|AC135892.1| Homo sapiens 12 BAC RP11-433J6 (Roswell Park Canc... 40 9.2
29gb|AC124534.4| Mus musculus BAC clone RP23-316G7 from chromosome... 40 9.2
30emb|AM048829.1| Triticum aestivum mRNA for sialyltransferase-lik... 40 9.2
31gb|AC118198.7| Mus musculus chromosome 10, clone RP23-179O14, co... 40 9.2
32emb|BX649443.16| Human DNA sequence from clone CTD-2589D3 on chr... 40 9.2
33emb|AL731561.12| Human DNA sequence from clone RP11-463P17 on ch... 40 9.2
34emb|AL589952.2| Human DNA sequence from clone RP11-122L16 on chr... 40 9.2
35gb|DQ452070.1| Salmo salar myogenic regulatory factor 5 mRNA, co... 40 9.2
36gb|CP000284.1| Methylobacillus flagellatus KT, complete genome 40 9.2
37gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 9.2
38gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 9.2
39gb|AE014821.1| Plasmodium falciparum 3D7 chromosome 14 section 6... 40 9.2
40emb|AL353769.19| Human DNA sequence from clone RP11-188L14 on ch... 40 9.2
41emb|AL132793.24|HSDJ324B8 Human DNA sequence from clone RP3-324B... 40 9.2
42gb|CP000088.1| Thermobifida fusca YX, complete genome 40 9.2
43emb|BX640434.1| Bordetella parapertussis strain 12822, complete ... 40 9.2
44gb|AC096566.2| Homo sapiens BAC clone RP11-292B1 from 4, complet... 40 9.2
45ref|NM_016162.2| Homo sapiens inhibitor of growth family, member... 40 9.2
46dbj|AK161420.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 9.2
47gb|AF105219.1|AF105219 Thermomonospora curvata putative regulato... 40 9.2
48gb|AF299334.1|AF299334 Mus musculus endopeptidase PHEX (Phex) ge... 40 9.2
49gb|AC159327.8| Mus musculus 10 BAC RP23-207L3 (Roswell Park Canc... 40 9.2
50dbj|AK077686.1| Mus musculus 8 days embryo whole body cDNA, RIKE... 40 9.2
51dbj|AK085094.1| Mus musculus 13 days embryo lung cDNA, RIKEN ful... 40 9.2
52gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 9.2
53dbj|AK041361.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 40 9.2
54dbj|AK041331.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 40 9.2
55dbj|AK033288.1| Mus musculus 15 days embryo male testis cDNA, RI... 40 9.2
56dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
57dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
58emb|AL929396.18| Zebrafish DNA sequence from clone CH211-93G23 i... 40 9.2
59ref|NM_001017938.1| Bos taurus GTP binding protein 1 (GTPBP1), mRNA 40 9.2
60gb|AY899214.1| Streptomyces aizunensis strain NRRL B-11277 glyco... 40 9.2
61dbj|AP003412.4| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
62dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
63dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 9.2
64gb|AF142648.1|AF142648 Mus musculus PEX protein gene, promoter a... 40 9.2
65ref|NM_175494.2| Mus musculus zinc finger protein 367 (Zfp367), ... 40 9.2
66ref|XM_573970.1| PREDICTED: Rattus norvegicus zinc finger protei... 40 9.2
67gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 9.2
68dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 9.2
69gb|AY751283.1| Oncorhynchus mykiss Myf5 (Myf5) mRNA, complete cds 40 9.2
70gb|BT021672.1| Bos taurus GTP binding protein 1 (GTPBP1), mRNA, ... 40 9.2
71dbj|AP004158.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
72dbj|AP004130.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
73gb|BC039844.1| Homo sapiens retinol binding protein 3, interstit... 40 9.2
74gb|AC153829.7| Mus musculus 10 BAC RP23-116E8 (Roswell Park Canc... 40 9.2
75emb|BX005145.8| Zebrafish DNA sequence from clone CH211-120O1, c... 40 9.2
76gb|BC085804.1| Rattus norvegicus zinc finger protein 367, mRNA (... 40 9.2
77gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 9.2
78emb|CT009655.2| Medicago truncatula chromosome 5 clone mth2-121g... 40 9.2
79emb|BX000434.11| Zebrafish DNA sequence from clone CH211-2E18, c... 40 9.2
80ref|NM_001012051.1| Rattus norvegicus zinc finger protein 367 (Z... 40 9.2
81gb|J05253.1|HUMIRBPG Homo sapiens interstitial retinol-binding p... 40 9.2
82dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 9.2
83emb|AJ303378.1|PPE303378 Phlebotomus perniciosus microsatellite ... 40 9.2
84emb|AL663072.12| Mouse DNA sequence from clone RP23-22J3 on chro... 40 9.2
85gb|M33864.1|HUMIRBPG1 Human (cline HGL-3) interstitial retinoid-... 40 9.2
86gb|J03912.1|HUMIRBPM Human interstitial retinol binding protein ... 40 9.2
87gb|M22453.1|HUMIRBP Human interphotoreceptor retinoid-binding pr... 40 9.2 
>gb|AY220734.1| Hordeum vulgare pathogenesis-related protein 10 (PR-10) mRNA,
           complete cds
          Length = 866

 Score =  638 bits (322), Expect = e-180
 Identities = 425/458 (92%), Gaps = 1/458 (0%)
 Strand = Plus / Minus

                                                                       
Query: 218 ttgatttatttctgatgtttctcgttttggtttaattaggcgtactcggcaggatgggcg 277
           |||||||||||||||||||| |||  ||| ||||||||| ||||||||||||| ||||||
Sbjct: 598 ttgatttatttctgatgtttgtcgcgttgttttaattagacgtactcggcagggtgggcg 539

                                                                       
Query: 278 accaggtatgcctcgaccatcttgagcaggtcgaggtaccccggcggcgagcgccgcctg 337
           ||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||
Sbjct: 538 accaggtatgcctcgaccatcttgagctggtcgaggtaccc-ggcggcgagtgccgcctg 480

                                                                       
Query: 338 gtcctccgccgacagcgccccgccgccgtccagcctctcgtactctaccctgagctttgc 397
           |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||
Sbjct: 479 gtcctccgccgacagcgccccgccgccgtcgagcctctcgtactccaccctgagcttcgc 420

                                                                       
Query: 398 cacgcaagcaccatccccggccgcctcgagcttcatctcgaccgcctgtgacttgagctg 457
           ||| |||||||| |||||||||||||| ||||||||||||||| |||| |||||||||||
Sbjct: 419 cacacaagcaccgtccccggccgcctcaagcttcatctcgaccacctgcgacttgagctg 360

                                                                       
Query: 458 gccacttaccttgtcgccctccagcacctctgtcttgaacaccctggccgcgttgtcgcg 517
           ||| || |||||| |||||||||| | ||| |||||||||||||| ||||||||||||||
Sbjct: 359 gccgctcaccttgccgccctccagtatctccgtcttgaacaccctagccgcgttgtcgcg 300

                                                                       
Query: 518 cgccaccacgcggctcttcatcacgtccgagcctgacagctccgccgccgccgggctgag 577
            |||| |||||||||| |||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 299 ggccatcacgcggctcctcatcacgcccgagcctgacagctccgccgccgccggactgag 240

                                                                       
Query: 578 cgtcatggtgaagacgctgccgggtccgccgtcgccctcgacgtccacggcgtcgatgaa 637
           ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||
Sbjct: 239 cgtcatggtgaagacgctgccgggtccgccgtcgccctcgacgtccacaacgtcgatgaa 180

                                                 
Query: 638 tcctgcgcaggccttgggcagggcggccgtgtcctcgc 675
            || ||||||||||||||||||||||||||||||||||
Sbjct: 179 gcccgcgcaggccttgggcagggcggccgtgtcctcgc 142



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 126/150 (84%), Gaps = 3/150 (2%)
 Strand = Plus / Minus

                                                                       
Query: 9   aatatttatct-catcaatgcttgaagcaacttacacacgaaatgcgagcttaaaacagg 67
           ||||||||||| ||| ||||||||||| |||||||||||||||| | | |||||||||||
Sbjct: 836 aatatttatctacattaatgcttgaagtaacttacacacgaaatacaaacttaaaacagg 777

                                                                       
Query: 68  gattaaacactc-atatatacctc-aataatttatactaaagcttaccaattgatttttc 125
           ||| ||| |||| ||| | ||| | || |||||||||||| | |||| | |||||| |||
Sbjct: 776 gatgaaaaactcaatacacaccccaaacaatttatactaatgattactacttgattcttc 717

                                         
Query: 126 tcccgaagtcgatcaggaggcaaacaacac 155
           || ||||||| | || || |||||||||||
Sbjct: 716 tcgcgaagtcaaccacgaagcaaacaacac 687
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                                 
Query: 612      ccctcgacgtccacggcgtcgatgaatcctgcgcaggccttgggcaggg 660
                |||||||| || ||||||||||||||||| |||||| ||||||||||||
Sbjct: 22625527 ccctcgacctcgacggcgtcgatgaatccggcgcagaccttgggcaggg 22625479



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                     
Query: 253      ttaggcgtactcggcaggatgggcgaccaggtatgcctcgaccatcttgagca 305
                ||||||||| |||||||| || ||||| |||||  |||||| |||||||||||
Sbjct: 22634586 ttaggcgtattcggcagggtgagcgacgaggtagtcctcgatcatcttgagca 22634534



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                     
Query: 253      ttaggcgtactcggcaggatgggcgaccaggtatgcctcgaccatcttgagca 305
                |||||||||||| ||||| || ||||| ||||| ||||||| ||||| |||||
Sbjct: 22626892 ttaggcgtactcagcagggtgagcgacgaggtacgcctcgatcatctggagca 22626840
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>gb|AF274851.1|AF274851 Oryza sativa pathogenesis-related protein PR-10b (PR10b) gene,
           complete cds
          Length = 2308

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                            
Query: 612 ccctcgacgtccacggcgtcgatgaatcctgcgcaggccttgggcaggg 660
           |||||||| || ||||||||||||||||| |||||| ||||||||||||
Sbjct: 504 ccctcgacctcgacggcgtcgatgaatccggcgcagaccttgggcaggg 456
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>dbj|AK099157.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064O18, full
           insert sequence
          Length = 807

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                            
Query: 612 ccctcgacgtccacggcgtcgatgaatcctgcgcaggccttgggcaggg 660
           |||||||| || ||||||||||||||||| |||||| ||||||||||||
Sbjct: 207 ccctcgacctcgacggcgtcgatgaatccggcgcagaccttgggcaggg 159



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 253 ttaggcgtactcggcaggatgggcgaccaggtatgcctcgaccatcttgagca 305
           |||||||||||| ||||| || ||||| ||||| ||||||| ||||| |||||
Sbjct: 553 ttaggcgtactcagcagggtgagcgacgaggtacgcctcgatcatctggagca 501
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>dbj|AK070762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064O19, full
           insert sequence
          Length = 807

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                            
Query: 612 ccctcgacgtccacggcgtcgatgaatcctgcgcaggccttgggcaggg 660
           |||||||| || ||||||||||||||||| |||||| ||||||||||||
Sbjct: 207 ccctcgacctcgacggcgtcgatgaatccggcgcagaccttgggcaggg 159



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 253 ttaggcgtactcggcaggatgggcgaccaggtatgcctcgaccatcttgagca 305
           |||||||||||| ||||| || ||||| ||||| ||||||| ||||| |||||
Sbjct: 553 ttaggcgtactcagcagggtgagcgacgaggtacgcctcgatcatctggagca 501
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                                 
Query: 612      ccctcgacgtccacggcgtcgatgaatcctgcgcaggccttgggcaggg 660
                |||||||| || ||||||||||||||||| |||||| ||||||||||||
Sbjct: 22553718 ccctcgacctcgacggcgtcgatgaatccggcgcagaccttgggcaggg 22553670



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                     
Query: 253      ttaggcgtactcggcaggatgggcgaccaggtatgcctcgaccatcttgagca 305
                ||||||||| |||||||| || ||||| |||||  |||||| |||||||||||
Sbjct: 22562777 ttaggcgtattcggcagggtgagcgacgaggtagtcctcgatcatcttgagca 22562725



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                     
Query: 253      ttaggcgtactcggcaggatgggcgaccaggtatgcctcgaccatcttgagca 305
                |||||||||||| ||||| || ||||| ||||| ||||||| ||||| |||||
Sbjct: 22555083 ttaggcgtactcagcagggtgagcgacgaggtacgcctcgatcatctggagca 22555031
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>emb|AL954871.5|CNS08CDA Oryza sativa chromosome 12, . BAC OSJNBb0085B24 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 131441

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                               
Query: 612    ccctcgacgtccacggcgtcgatgaatcctgcgcaggccttgggcaggg 660
              |||||||| || ||||||||||||||||| |||||| ||||||||||||
Sbjct: 128106 ccctcgacctcgacggcgtcgatgaatccggcgcagaccttgggcaggg 128058



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                   
Query: 253    ttaggcgtactcggcaggatgggcgaccaggtatgcctcgaccatcttgagca 305
              |||||||||||| ||||| || ||||| ||||| ||||||| ||||| |||||
Sbjct: 129471 ttaggcgtactcagcagggtgagcgacgaggtacgcctcgatcatctggagca 129419
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>emb|AL845342.2|CNS08CB4 Oryza sativa chromosome 12, . BAC OSJNBa0027H05 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 138368

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                              
Query: 612   ccctcgacgtccacggcgtcgatgaatcctgcgcaggccttgggcaggg 660
             |||||||| || ||||||||||||||||| |||||| ||||||||||||
Sbjct: 70647 ccctcgacctcgacggcgtcgatgaatccggcgcagaccttgggcaggg 70599



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                  
Query: 253   ttaggcgtactcggcaggatgggcgaccaggtatgcctcgaccatcttgagca 305
             ||||||||| |||||||| || ||||| |||||  |||||| |||||||||||
Sbjct: 79706 ttaggcgtattcggcagggtgagcgacgaggtagtcctcgatcatcttgagca 79654



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                  
Query: 253   ttaggcgtactcggcaggatgggcgaccaggtatgcctcgaccatcttgagca 305
             |||||||||||| ||||| || ||||| ||||| ||||||| ||||| |||||
Sbjct: 72012 ttaggcgtactcagcagggtgagcgacgaggtacgcctcgatcatctggagca 71960
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>gb|AF274850.1|AF274850 Oryza sativa pathogenesis-related protein PR-10a (PR10a) gene,
            complete cds
          Length = 2594

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 253  ttaggcgtactcggcaggatgggcgaccaggtatgcctcgaccatcttgagca 305
            ||||||||| |||||||| || ||||| |||||  |||||| |||||||||||
Sbjct: 2291 ttaggcgtattcggcagggtgagcgacgaggtagtcctcgatcatcttgagca 2239
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>dbj|AK071613.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023104B18, full
           insert sequence
          Length = 814

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 253 ttaggcgtactcggcaggatgggcgaccaggtatgcctcgaccatcttgagca 305
           ||||||||| |||||||| || ||||| |||||  |||||| |||||||||||
Sbjct: 577 ttaggcgtattcggcagggtgagcgacgaggtagtcctcgatcatcttgagca 525
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>dbj|D38170.1| Rice mRNA for probenazole-inducible protein PBZ1, complete cds
          Length = 833

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 253 ttaggcgtactcggcaggatgggcgaccaggtatgcctcgaccatcttgagca 305
           ||||||||| |||||||| || ||||| |||||  |||||| |||||||||||
Sbjct: 559 ttaggcgtattcggcagggtgagcgacgaggtagtcctcgatcatcttgagca 507
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>dbj|D82066.1| Oryza sativa gene for PBZ1, complete cds
          Length = 3188

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 253  ttaggcgtactcggcaggatgggcgaccaggtatgcctcgaccatcttgagca 305
            ||||||||| |||||||| || ||||| |||||  |||||| |||||||||||
Sbjct: 2258 ttaggcgtattcggcagggtgagcgacgaggtagtcctcgatcatcttgagca 2206
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>gb|AY310323.1| Streptomyces sp. FR-008 heptaene macrolide complex synthesis gene
              cluster, complete sequence
          Length = 138203

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 610    cgccctcgacgtccacggcgtcgatg 635
              |||||||||||||||||||| |||||
Sbjct: 104002 cgccctcgacgtccacggcggcgatg 104027



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 610   cgccctcgacgtccacggcgtcgatg 635
             |||||||||||||||||||| |||||
Sbjct: 97861 cgccctcgacgtccacggcggcgatg 97886
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>gb|AC122533.4| Mus musculus BAC clone RP24-538L1 from chromosome 13, complete sequence
          Length = 159734

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 167   tcatattactttatttatttat 188
             ||||||||||||||||||||||
Sbjct: 77933 tcatattactttatttatttat 77954
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>dbj|AP003732.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-682D22, complete
             sequence
          Length = 193132

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 218   ttgatttatttctgatgtttct 239
             ||||||||||||||||||||||
Sbjct: 32448 ttgatttatttctgatgtttct 32427
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>gb|AC069218.13| Homo sapiens 3 BAC RP11-393N4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 164007

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 169   atattactttatttatttatgcgacaaat 197
             ||||||||||||||||||||  |||||||
Sbjct: 85256 atattactttatttatttatttgacaaat 85228
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 424    cgagcttcatctcgaccgcct 444
              |||||||||||||||||||||
Sbjct: 225092 cgagcttcatctcgaccgcct 225072
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 593     gctgccgggtccgccgtcgcc 613
               |||||||||||||||||||||
Sbjct: 3369000 gctgccgggtccgccgtcgcc 3369020
to top
>gb|AC133781.4| Homo sapiens BAC clone RP11-756K13 from 2, complete sequence
          Length = 185571

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 170    tattactttatttatttatgcgaca 194
              |||||||||||||||||||| ||||
Sbjct: 134551 tattactttatttatttatgagaca 134575
to top
>gb|AC114730.5| Homo sapiens BAC clone RP13-925E23 from 2, complete sequence
          Length = 193894

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 170    tattactttatttatttatgcgaca 194
              |||||||||||||||||||| ||||
Sbjct: 130792 tattactttatttatttatgagaca 130768
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 467     cttgtcgccctccagcacctc 487
               |||||||||||||||||||||
Sbjct: 6076759 cttgtcgccctccagcacctc 6076739
to top
>ref|XM_481204.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1908

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 359  gccgccgtccagcctctcgt 378
            ||||||||||||||||||||
Sbjct: 1695 gccgccgtccagcctctcgt 1676
to top
>ref|NM_002900.2| Homo sapiens retinol binding protein 3, interstitial (RBP3), mRNA
          Length = 4289

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 479  cagcacctctgtcttgaaca 498
            ||||||||||||||||||||
Sbjct: 2331 cagcacctctgtcttgaaca 2312
to top
>gb|AC158990.2| Mus musculus BAC clone RP23-416E18 from chromosome 13, complete
             sequence
          Length = 191036

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 559   ccgccgccgccgggctgagcgtca 582
             |||||||| |||||||||||||||
Sbjct: 88884 ccgccgcccccgggctgagcgtca 88861
to top
>gb|AC149779.3| Bos taurus  BAC CH240-5F6 (Children's Hospital Oakland Research Institute
              Bovine BAC Library (male)) complete sequence
          Length = 181013

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 169    atattactttatttatttat 188
              ||||||||||||||||||||
Sbjct: 137439 atattactttatttatttat 137458
to top
>ref|XM_748110.1| Aspergillus fumigatus Af293 MFS monosaccharide transporter
            (Afu5g14540) partial mRNA
          Length = 1596

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 485  ctctgtcttgaacaccctgg 504
            ||||||||||||||||||||
Sbjct: 1551 ctctgtcttgaacaccctgg 1570
to top
>gb|AC144508.3| Mus musculus BAC clone RP24-152C23 from chromosome 15, complete
             sequence
          Length = 155524

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 169   atattactttatttatttat 188
             ||||||||||||||||||||
Sbjct: 20127 atattactttatttatttat 20108
to top
>gb|AC135892.1| Homo sapiens 12 BAC RP11-433J6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 56520

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 474   ccctccagcacctctgtctt 493
             ||||||||||||||||||||
Sbjct: 50487 ccctccagcacctctgtctt 50506
to top
>gb|AC124534.4| Mus musculus BAC clone RP23-316G7 from chromosome 1, complete sequence
          Length = 177675

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   atattactttatttatttat 188
             ||||||||||||||||||||
Sbjct: 78222 atattactttatttatttat 78241
to top
>emb|AM048829.1| Triticum aestivum mRNA for sialyltransferase-like protein (stv2
           gene)
          Length = 1756

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 321 gcggcgagcgccgcctggtcctccgccgacagcgccccgccgcc 364
           ||||||||||||||| ||||| || |||| ||| || |||||||
Sbjct: 226 gcggcgagcgccgccaggtccgcctccgagagccccgcgccgcc 183
to top
>gb|AC118198.7| Mus musculus chromosome 10, clone RP23-179O14, complete sequence
          Length = 225267

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   tcatattactttatttattt 186
             ||||||||||||||||||||
Sbjct: 85648 tcatattactttatttattt 85667
to top
>emb|BX649443.16| Human DNA sequence from clone CTD-2589D3 on chromosome X Contains part
             of the DHRSX gene for dehydrogenase/reductase (SDR family)
             X-linked and a novel gene, complete sequence
          Length = 79564

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 169   atattactttatttatttat 188
             ||||||||||||||||||||
Sbjct: 29793 atattactttatttatttat 29774
to top
>emb|AL731561.12| Human DNA sequence from clone RP11-463P17 on chromosome 10 Contains a
              novel gene, gene FLJ32104, a novel gene, the RBP3 gene for
              retinol binding protein 3, the GDF2 gene for growth
              differentiation factor 2, the GDF10 gene for growth
              differentiation factor 10 and three CpG islands, complete
              sequence
          Length = 204512

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 479    cagcacctctgtcttgaaca 498
              ||||||||||||||||||||
Sbjct: 111254 cagcacctctgtcttgaaca 111273
to top
>emb|AL589952.2| Human DNA sequence from clone RP11-122L16 on chromosome 6, complete
             sequence
          Length = 40893

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   atattactttatttatttat 188
             ||||||||||||||||||||
Sbjct: 16971 atattactttatttatttat 16990
to top
>gb|DQ452070.1| Salmo salar myogenic regulatory factor 5 mRNA, complete cds
          Length = 720

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 462 cttaccttgtcgccctccagcacc 485
           |||||||| |||||||||||||||
Sbjct: 637 cttaccttctcgccctccagcacc 660
to top
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome
          Length = 2971517

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 340    cctccgccgacagcgccccgccgc 363
              |||||||||||| |||||||||||
Sbjct: 322833 cctccgccgacaccgccccgccgc 322810
to top
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 318     ccggcggcgagcgccgcctg 337
               ||||||||||||||||||||
Sbjct: 3007059 ccggcggcgagcgccgcctg 3007040
to top
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 613     cctcgacgtccacggcgtcg 632
               ||||||||||||||||||||
Sbjct: 4636997 cctcgacgtccacggcgtcg 4636978
to top
>gb|AE014821.1| Plasmodium falciparum 3D7 chromosome 14 section 6 of 13 of the complete
              sequence
          Length = 250823

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 169    atattactttatttatttat 188
              ||||||||||||||||||||
Sbjct: 230870 atattactttatttatttat 230889
to top
>emb|AL353769.19| Human DNA sequence from clone RP11-188L14 on chromosome 10 Contains a
             CpG island, complete sequence
          Length = 79509

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 169   atattactttatttatttat 188
             ||||||||||||||||||||
Sbjct: 10315 atattactttatttatttat 10296
to top
>emb|AL132793.24|HSDJ324B8 Human DNA sequence from clone RP3-324B8 on chromosome 6q12-13, complete
             sequence
          Length = 120535

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   catattactttatttattta 187
             ||||||||||||||||||||
Sbjct: 47126 catattactttatttattta 47145
to top
>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 287    gcctcgaccatcttgagcaggtcg 310
              |||||||| |||||||||||||||
Sbjct: 985938 gcctcgacgatcttgagcaggtcg 985961
to top
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14
          Length = 344805

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 333    gcctggtcctccgccgacag 352
              ||||||||||||||||||||
Sbjct: 192283 gcctggtcctccgccgacag 192264
to top
>gb|AC096566.2| Homo sapiens BAC clone RP11-292B1 from 4, complete sequence
          Length = 101931

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 176   tttatttatttatgcgacaaataatttc 203
             ||||||||||||||| ||||||| ||||
Sbjct: 96390 tttatttatttatgccacaaatattttc 96363
to top
>ref|NM_016162.2| Homo sapiens inhibitor of growth family, member 4 (ING4), mRNA
          Length = 1717

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 474  ccctccagcacctctgtctt 493
            ||||||||||||||||||||
Sbjct: 1575 ccctccagcacctctgtctt 1556
to top
>dbj|AK161420.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4930568A15 product:unclassifiable, full
           insert sequence
          Length = 2020

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 559 ccgccgccgccgggctgagcgtca 582
           |||||||| |||||||||||||||
Sbjct: 163 ccgccgcccccgggctgagcgtca 186
to top
>gb|AF105219.1|AF105219 Thermomonospora curvata putative regulatory protein (aglR),
            alpha-1,4-glucosidase (aglA), and putative maltose
            binding protein (aglE) genes, complete cds; and
            transporter protein (aglF) gene, partial cds
          Length = 5521

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 287  gcctcgaccatcttgagcaggtcg 310
            |||||||| |||||||||||||||
Sbjct: 4338 gcctcgacgatcttgagcaggtcg 4315
to top
>gb|AF299334.1|AF299334 Mus musculus endopeptidase PHEX (Phex) gene, promoter region and
            partial cds
          Length = 4513

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 161  acttggtcatattactttatttatttat 188
            |||||||||||||  |||||||||||||
Sbjct: 1288 acttggtcatatttatttatttatttat 1315
to top
>gb|AC159327.8| Mus musculus 10 BAC RP23-207L3 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 215004

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 167   tcatattactttatttattt 186
             ||||||||||||||||||||
Sbjct: 91409 tcatattactttatttattt 91390
to top
>dbj|AK077686.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:5730521N16 product:zinc finger
           protein 367, full insert sequence
          Length = 1971

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 559 ccgccgccgccgggctgagcgtca 582
           |||||||| |||||||||||||||
Sbjct: 528 ccgccgcccccgggctgagcgtca 505
to top
>dbj|AK085094.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched
           library, clone:D430035L18 product:weakly similar to ZINC
           FINGER PROTEIN 4 (FRAGMENT) [Rattus norvegicus], full
           insert sequence
          Length = 3083

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 559 ccgccgccgccgggctgagcgtca 582
           |||||||| |||||||||||||||
Sbjct: 187 ccgccgcccccgggctgagcgtca 164
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 514     cgcgcgccaccacgcggctc 533
               ||||||||||||||||||||
Sbjct: 4110539 cgcgcgccaccacgcggctc 4110520
to top
>dbj|AK041361.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A630005F21 product:weakly similar to ZINC
           FINGER PROTEIN 4 (FRAGMENT) [Rattus norvegicus], full
           insert sequence
          Length = 2753

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 559 ccgccgccgccgggctgagcgtca 582
           |||||||| |||||||||||||||
Sbjct: 460 ccgccgcccccgggctgagcgtca 437
to top
>dbj|AK041331.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A630002D23 product:weakly similar to ZINC
           FINGER PROTEIN 4 (FRAGMENT) [Rattus norvegicus], full
           insert sequence
          Length = 1799

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 559 ccgccgccgccgggctgagcgtca 582
           |||||||| |||||||||||||||
Sbjct: 463 ccgccgcccccgggctgagcgtca 440
to top
>dbj|AK033288.1| Mus musculus 15 days embryo male testis cDNA, RIKEN full-length
           enriched library, clone:8030486J21 product:weakly
           similar to ZINC FINGER PROTEIN 4 (FRAGMENT) [Rattus
           norvegicus], full insert sequence
          Length = 3493

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 559 ccgccgccgccgggctgagcgtca 582
           |||||||| |||||||||||||||
Sbjct: 460 ccgccgcccccgggctgagcgtca 437
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 359      gccgccgtccagcctctcgt 378
                ||||||||||||||||||||
Sbjct: 10586372 gccgccgtccagcctctcgt 10586353
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 166      gtcatattactttatttatttatg 189
                ||||||||| ||||||||||||||
Sbjct: 41203412 gtcatattagtttatttatttatg 41203435
to top
>emb|AL929396.18| Zebrafish DNA sequence from clone CH211-93G23 in linkage group 1,
             complete sequence
          Length = 169067

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   atattactttatttatttat 188
             ||||||||||||||||||||
Sbjct: 60647 atattactttatttatttat 60666
to top
>ref|NM_001017938.1| Bos taurus GTP binding protein 1 (GTPBP1), mRNA
          Length = 1873

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 295  catcttgagcaggtcgaggt 314
            ||||||||||||||||||||
Sbjct: 1127 catcttgagcaggtcgaggt 1108
to top
>gb|AY899214.1| Streptomyces aizunensis strain NRRL B-11277 glycosyltransferase,
             polyketide synthase type Is, acyl transferase, membrane
             protein, ABC transporter, sugar dehydratase/epimerase,
             sugar epimerase, sugar nucleotidyltransferase, sugar
             dehydratase/epimerase, thioesterase, acyl CoA ligase,
             amine oxidase, phosphopantetheinyl transferase,
             transcriptional regulator,
             carboxylase/carboxyltransferase, amidinohydrolase, amide
             synthetase, 5-aminolevulinate synthase, and acyl CoA
             ligase genes, complete cds; and unknown gene
          Length = 161719

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 319   cggcggcgagcgccgcctggtcct 342
             ||||||||||||||||| ||||||
Sbjct: 70348 cggcggcgagcgccgccaggtcct 70325
to top
>dbj|AP003412.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1150F11
          Length = 130355

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 166   gtcatattactttatttatttatg 189
             ||||||||| ||||||||||||||
Sbjct: 20327 gtcatattagtttatttatttatg 20350
to top
>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0504E02
          Length = 137468

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 166    gtcatattactttatttatttatg 189
              ||||||||| ||||||||||||||
Sbjct: 100467 gtcatattagtttatttatttatg 100490
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 315    accccggcggcgagcgccgc 334
              ||||||||||||||||||||
Sbjct: 102283 accccggcggcgagcgccgc 102302
to top
>gb|AF142648.1|AF142648 Mus musculus PEX protein gene, promoter and partial sequence
          Length = 3005

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 161  acttggtcatattactttatttatttat 188
            |||||||||||||  |||||||||||||
Sbjct: 1510 acttggtcatatttatttatttatttat 1537
to top
>ref|NM_175494.2| Mus musculus zinc finger protein 367 (Zfp367), mRNA
          Length = 3493

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 559 ccgccgccgccgggctgagcgtca 582
           |||||||| |||||||||||||||
Sbjct: 460 ccgccgcccccgggctgagcgtca 437
to top
>ref|XM_573970.1| PREDICTED: Rattus norvegicus zinc finger protein 367 (predicted)
           (Zfp367_predicted), mRNA
          Length = 3495

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 559 ccgccgccgccgggctgagcgtca 582
           |||||||| |||||||||||||||
Sbjct: 436 ccgccgcccccgggctgagcgtca 413
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 315     accccggcggcgagcgccgcctgg 338
               ||||||||||| ||||||||||||
Sbjct: 3584635 accccggcggccagcgccgcctgg 3584612
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 556     gctccgccgccgccgggctg 575
               ||||||||||||||||||||
Sbjct: 5603250 gctccgccgccgccgggctg 5603269
to top
>gb|AY751283.1| Oncorhynchus mykiss Myf5 (Myf5) mRNA, complete cds
          Length = 1050

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 462 cttaccttgtcgccctccagcacc 485
           |||||||| |||||||||||||||
Sbjct: 642 cttaccttctcgccctccagcacc 665
to top
>gb|BT021672.1| Bos taurus GTP binding protein 1 (GTPBP1), mRNA, complete cds
          Length = 1873

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 295  catcttgagcaggtcgaggt 314
            ||||||||||||||||||||
Sbjct: 1127 catcttgagcaggtcgaggt 1108
to top
>dbj|AP004158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1118_F05
          Length = 134247

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 359   gccgccgtccagcctctcgt 378
             ||||||||||||||||||||
Sbjct: 14012 gccgccgtccagcctctcgt 13993
to top
>dbj|AP004130.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1014_B05
          Length = 121853

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 359    gccgccgtccagcctctcgt 378
              ||||||||||||||||||||
Sbjct: 105840 gccgccgtccagcctctcgt 105821
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>gb|BC039844.1| Homo sapiens retinol binding protein 3, interstitial, mRNA (cDNA
            clone MGC:48862 IMAGE:5578501), complete cds
          Length = 4279

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 479  cagcacctctgtcttgaaca 498
            ||||||||||||||||||||
Sbjct: 2321 cagcacctctgtcttgaaca 2302
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>gb|AC153829.7| Mus musculus 10 BAC RP23-116E8 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 188043

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   tcatattactttatttattt 186
             ||||||||||||||||||||
Sbjct: 26925 tcatattactttatttattt 26944
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>emb|BX005145.8| Zebrafish DNA sequence from clone CH211-120O1, complete sequence
          Length = 181056

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   tattactttatttatttatg 189
             ||||||||||||||||||||
Sbjct: 36518 tattactttatttatttatg 36537
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>gb|BC085804.1| Rattus norvegicus zinc finger protein 367, mRNA (cDNA clone
           MGC:93863 IMAGE:7111996), complete cds
          Length = 3521

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 559 ccgccgccgccgggctgagcgtca 582
           |||||||| |||||||||||||||
Sbjct: 436 ccgccgcccccgggctgagcgtca 413
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 332     cgcctggtcctccgccgaca 351
               ||||||||||||||||||||
Sbjct: 2076644 cgcctggtcctccgccgaca 2076663
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>emb|CT009655.2| Medicago truncatula chromosome 5 clone mth2-121g11, COMPLETE SEQUENCE
          Length = 126690

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 78    tcatatatacctcaataatttata 101
             |||||| |||||||||||||||||
Sbjct: 67859 tcatatttacctcaataatttata 67882
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>emb|BX000434.11| Zebrafish DNA sequence from clone CH211-2E18, complete sequence
          Length = 179109

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   tattactttatttatttatg 189
             ||||||||||||||||||||
Sbjct: 38251 tattactttatttatttatg 38270
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>ref|NM_001012051.1| Rattus norvegicus zinc finger protein 367 (Zfp367), mRNA
          Length = 3521

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 559 ccgccgccgccgggctgagcgtca 582
           |||||||| |||||||||||||||
Sbjct: 436 ccgccgcccccgggctgagcgtca 413
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>gb|J05253.1|HUMIRBPG Homo sapiens interstitial retinol-binding protein precursor (IRBP)
            gene, complete cds
          Length = 9711

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 479  cagcacctctgtcttgaaca 498
            ||||||||||||||||||||
Sbjct: 2343 cagcacctctgtcttgaaca 2324
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 345     gccgacagcgccccgccgcc 364
               ||||||||||||||||||||
Sbjct: 1465510 gccgacagcgccccgccgcc 1465491
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>emb|AJ303378.1|PPE303378 Phlebotomus perniciosus microsatellite DNA, clone AAm24
          Length = 406

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 552 gacagctccgccgccgccgg 571
           ||||||||||||||||||||
Sbjct: 357 gacagctccgccgccgccgg 376
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>emb|AL663072.12| Mouse DNA sequence from clone RP23-22J3 on chromosome X, complete
             sequence
          Length = 249536

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 161   acttggtcatattactttatttatttat 188
             |||||||||||||  |||||||||||||
Sbjct: 54805 acttggtcatatttatttatttatttat 54778
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>gb|M33864.1|HUMIRBPG1 Human (cline HGL-3) interstitial retinoid-binding protein 3 (RBP3)
            gene, exon 1
          Length = 3307

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 479  cagcacctctgtcttgaaca 498
            ||||||||||||||||||||
Sbjct: 2458 cagcacctctgtcttgaaca 2439
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>gb|J03912.1|HUMIRBPM Human interstitial retinol binding protein (IRBP) mRNA, complete cds
          Length = 4124

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 479  cagcacctctgtcttgaaca 498
            ||||||||||||||||||||
Sbjct: 2214 cagcacctctgtcttgaaca 2195
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>gb|M22453.1|HUMIRBP Human interphotoreceptor retinoid-binding protein (IRBP) mRNA,
            complete cds
          Length = 4275

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 479  cagcacctctgtcttgaaca 498
            ||||||||||||||||||||
Sbjct: 2332 cagcacctctgtcttgaaca 2313


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8,064,080
Number of Sequences: 3902068
Number of extensions: 8064080
Number of successful extensions: 199063
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 195946
Number of HSP's gapped (non-prelim): 3116
length of query: 675
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 652
effective length of database: 17,143,297,704
effective search space: 11177430103008
effective search space used: 11177430103008
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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