ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd26p18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464755.1| Oryza sativa (japonica cultivar-group), mRNA 260 5e-66
2dbj|AK066722.1| Oryza sativa (japonica cultivar-group) cDNA clon... 260 5e-66
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 244 3e-61
4dbj|AP005003.3| Oryza sativa (japonica cultivar-group) genomic D... 244 3e-61
5dbj|AP005394.3| Oryza sativa (japonica cultivar-group) genomic D... 244 3e-61
6dbj|AK068719.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 1e-17
7dbj|AK068350.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 1e-17
8dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
9dbj|AP004739.3| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
10dbj|AP003713.3| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
11gb|AC138109.3| Mus musculus BAC clone RP24-444I15 from chromosom... 42 2.2
12dbj|AK143363.1| Mus musculus 2 days pregnant adult female ovary ... 42 2.2
13gb|AY752342.1| Nesocichla eremita NADH dehydrogenase subunit 2 (... 42 2.2
14gb|AY739093.1| Takifugu rubripes frMUT, frGPR136L1, and frGPR136... 40 8.7
15gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 40 8.7
16ref|XM_382320.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 40 8.7
17ref|XM_447173.1| Candida glabrata CBS138, CAGL0H08580g partial mRNA 40 8.7
18gb|AC124259.6| Homo sapiens chromosome 11, clone RP11-21N2, comp... 40 8.7
19ref|XM_662608.1| Cryptosporidium hominis TU502 protease (Chro.60... 40 8.7
20emb|AL353700.14| Human DNA sequence from clone RP3-350J21 on chr... 40 8.7
21gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 8.7
22emb|AL035604.16|HS38C16 Human DNA sequence from clone RP1-38C16 ... 40 8.7
23emb|CR380954.1| Candida glabrata strain CBS138 chromosome H comp... 40 8.7
24emb|BX538350.1| Cryptosporidium parvum chromosome 6, complete se... 40 8.7
25emb|AL031745.8|PFMAL1P2 Plasmodium falciparum DNA from MAL1P2 40 8.7
26emb|AL731867.27| Mouse DNA sequence from clone RP23-73A4 on chro... 40 8.7
27gb|AY821914.1| Didelphis virginiana blcap (Blcap) gene, complete... 40 8.7
28gb|AC152833.3| Ornithorhynchus anatinus BAC clone OABb-6A1 from ... 40 8.7
29gb|AC099329.2| Homo sapiens chromosome 3 clone RP11-70C1, comple... 40 8.7
30gb|AC044810.7| Homo sapiens chromosome 11, clone RP11-494M8, com... 40 8.7
31ref|XM_625346.1| Cryptosporidium parvum Iowa II hypothetical pro... 40 8.7
32gb|AC092043.3| Homo sapiens chromosome 3 clone RP11-141M3, compl... 40 8.7
33ref|XM_395197.2| PREDICTED: Apis mellifera similar to ENSANGP000... 40 8.7
34gb|AC154517.2| Mus musculus BAC clone RP24-85L11 from chromosome... 40 8.7
35emb|CT025539.18| Mouse DNA sequence from clone RP23-221K23 on ch... 40 8.7
36gb|AC007012.1|AC007012 Homo sapiens chromosome 16, clone 185J20,... 40 8.7
37dbj|AP000926.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.7
38emb|AL731554.13| Mouse DNA sequence from clone RP23-337H1 on chr... 40 8.7 
>ref|XM_464755.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 808

 Score =  260 bits (131), Expect = 5e-66
 Identities = 281/331 (84%)
 Strand = Plus / Minus

                                                                       
Query: 94  atatgcatttgtacatcttccttgttctggtgtgcaggtaaattggcactgctgtacaag 153
           ||||||||||||||||||| |||| ||||||||| ||||   || ||||||||| ||| |
Sbjct: 672 atatgcatttgtacatctttcttgctctggtgtgtaggtggtttagcactgctgcacagg 613

                                                                       
Query: 154 aggttggtgctgcttgctctggacatttgacaagcaaatgaaccttttgaggacctcttt 213
           ||| |||||||||||| ||| ||||   |||| | |||||| ||||| |||| |||||| 
Sbjct: 612 aggctggtgctgcttggtcttgacagcagacaggtaaatgatcctttcgagggcctcttc 553

                                                                       
Query: 214 gttatcatcttgttgcatgtccttggtaagtgatttgaccgctgcttcatgcctaatcct 273
           | ||||||||||||||||| | |||| ||||||||||| || || |||||| ||| ||||
Sbjct: 552 gctatcatcttgttgcatggctttggcaagtgatttgatcgttgattcatgtctagtcct 493

                                                                       
Query: 274 gatgtatagctcttgcatgtcttcatcctcttgctgtaggtaacttcctttccaaggtct 333
           | || |||||| ||||| | ||||||||||||  ||||||||| || |||| ||||||| 
Sbjct: 492 gctgcatagcttttgcacgccttcatcctcttattgtaggtaattttctttgcaaggtcc 433

                                                                       
Query: 334 tgaagacatgtagcataagatatcgatgtgaatgattgggacttcccttggtagtacttg 393
           |||| ||||||||||| |||||||||||||||||||||||| || |||||||| || |||
Sbjct: 432 tgaacacatgtagcatcagatatcgatgtgaatgattgggattttccttggtaatagttg 373

                                          
Query: 394 gacagccctgtcctggcaggaagctgggcta 424
           ||||||||| |||||  ||||||||||||||
Sbjct: 372 gacagccctctcctgataggaagctgggcta 342



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 466 tccagctgcaaggtgctcgacgatgctga 494
           ||||||||||| |||||||| ||||||||
Sbjct: 306 tccagctgcaatgtgctcgaagatgctga 278
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>dbj|AK066722.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013087K21, full
           insert sequence
          Length = 808

 Score =  260 bits (131), Expect = 5e-66
 Identities = 281/331 (84%)
 Strand = Plus / Minus

                                                                       
Query: 94  atatgcatttgtacatcttccttgttctggtgtgcaggtaaattggcactgctgtacaag 153
           ||||||||||||||||||| |||| ||||||||| ||||   || ||||||||| ||| |
Sbjct: 672 atatgcatttgtacatctttcttgctctggtgtgtaggtggtttagcactgctgcacagg 613

                                                                       
Query: 154 aggttggtgctgcttgctctggacatttgacaagcaaatgaaccttttgaggacctcttt 213
           ||| |||||||||||| ||| ||||   |||| | |||||| ||||| |||| |||||| 
Sbjct: 612 aggctggtgctgcttggtcttgacagcagacaggtaaatgatcctttcgagggcctcttc 553

                                                                       
Query: 214 gttatcatcttgttgcatgtccttggtaagtgatttgaccgctgcttcatgcctaatcct 273
           | ||||||||||||||||| | |||| ||||||||||| || || |||||| ||| ||||
Sbjct: 552 gctatcatcttgttgcatggctttggcaagtgatttgatcgttgattcatgtctagtcct 493

                                                                       
Query: 274 gatgtatagctcttgcatgtcttcatcctcttgctgtaggtaacttcctttccaaggtct 333
           | || |||||| ||||| | ||||||||||||  ||||||||| || |||| ||||||| 
Sbjct: 492 gctgcatagcttttgcacgccttcatcctcttattgtaggtaattttctttgcaaggtcc 433

                                                                       
Query: 334 tgaagacatgtagcataagatatcgatgtgaatgattgggacttcccttggtagtacttg 393
           |||| ||||||||||| |||||||||||||||||||||||| || |||||||| || |||
Sbjct: 432 tgaacacatgtagcatcagatatcgatgtgaatgattgggattttccttggtaatagttg 373

                                          
Query: 394 gacagccctgtcctggcaggaagctgggcta 424
           ||||||||| |||||  ||||||||||||||
Sbjct: 372 gacagccctctcctgataggaagctgggcta 342



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 466 tccagctgcaaggtgctcgacgatgctga 494
           ||||||||||| |||||||| ||||||||
Sbjct: 306 tccagctgcaatgtgctcgaagatgctga 278
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  244 bits (123), Expect = 3e-61
 Identities = 267/315 (84%)
 Strand = Plus / Plus

                                                                           
Query: 94      atatgcatttgtacatcttccttgttctggtgtgcaggtaaattggcactgctgtacaag 153
               ||||||||||||||||||| |||| ||||||||| ||||   || ||||||||| ||| |
Sbjct: 7131270 atatgcatttgtacatctttcttgctctggtgtgtaggtggtttagcactgctgcacagg 7131329

                                                                           
Query: 154     aggttggtgctgcttgctctggacatttgacaagcaaatgaaccttttgaggacctcttt 213
               ||| |||||||||||| ||| ||||   |||| | |||||| ||||| |||| |||||| 
Sbjct: 7131330 aggctggtgctgcttggtcttgacagcagacaggtaaatgatcctttcgagggcctcttc 7131389

                                                                           
Query: 214     gttatcatcttgttgcatgtccttggtaagtgatttgaccgctgcttcatgcctaatcct 273
               | ||||||||||||||||| | |||| ||||||||||| || || |||||| ||| ||||
Sbjct: 7131390 gctatcatcttgttgcatggctttggcaagtgatttgatcgttgattcatgtctagtcct 7131449

                                                                           
Query: 274     gatgtatagctcttgcatgtcttcatcctcttgctgtaggtaacttcctttccaaggtct 333
               | || |||||| ||||| | ||||||||||||  ||||||||| || |||| ||||||| 
Sbjct: 7131450 gctgcatagcttttgcacgccttcatcctcttattgtaggtaattttctttgcaaggtcc 7131509

                                                                           
Query: 334     tgaagacatgtagcataagatatcgatgtgaatgattgggacttcccttggtagtacttg 393
               |||| ||||||||||| |||||||||||||||||||||||| || |||||||| || |||
Sbjct: 7131510 tgaacacatgtagcatcagatatcgatgtgaatgattgggattttccttggtaatagttg 7131569

                              
Query: 394     gacagccctgtcctg 408
               ||||||||| |||||
Sbjct: 7131570 gacagccctctcctg 7131584



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 466     tccagctgcaaggtgctcgacgatgctga 494
               ||||||||||| |||||||| ||||||||
Sbjct: 7132178 tccagctgcaatgtgctcgaagatgctga 7132206
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>dbj|AP005003.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0495C02
          Length = 151467

 Score =  244 bits (123), Expect = 3e-61
 Identities = 267/315 (84%)
 Strand = Plus / Plus

                                                                          
Query: 94     atatgcatttgtacatcttccttgttctggtgtgcaggtaaattggcactgctgtacaag 153
              ||||||||||||||||||| |||| ||||||||| ||||   || ||||||||| ||| |
Sbjct: 134689 atatgcatttgtacatctttcttgctctggtgtgtaggtggtttagcactgctgcacagg 134748

                                                                          
Query: 154    aggttggtgctgcttgctctggacatttgacaagcaaatgaaccttttgaggacctcttt 213
              ||| |||||||||||| ||| ||||   |||| | |||||| ||||| |||| |||||| 
Sbjct: 134749 aggctggtgctgcttggtcttgacagcagacaggtaaatgatcctttcgagggcctcttc 134808

                                                                          
Query: 214    gttatcatcttgttgcatgtccttggtaagtgatttgaccgctgcttcatgcctaatcct 273
              | ||||||||||||||||| | |||| ||||||||||| || || |||||| ||| ||||
Sbjct: 134809 gctatcatcttgttgcatggctttggcaagtgatttgatcgttgattcatgtctagtcct 134868

                                                                          
Query: 274    gatgtatagctcttgcatgtcttcatcctcttgctgtaggtaacttcctttccaaggtct 333
              | || |||||| ||||| | ||||||||||||  ||||||||| || |||| ||||||| 
Sbjct: 134869 gctgcatagcttttgcacgccttcatcctcttattgtaggtaattttctttgcaaggtcc 134928

                                                                          
Query: 334    tgaagacatgtagcataagatatcgatgtgaatgattgggacttcccttggtagtacttg 393
              |||| ||||||||||| |||||||||||||||||||||||| || |||||||| || |||
Sbjct: 134929 tgaacacatgtagcatcagatatcgatgtgaatgattgggattttccttggtaatagttg 134988

                             
Query: 394    gacagccctgtcctg 408
              ||||||||| |||||
Sbjct: 134989 gacagccctctcctg 135003



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 466    tccagctgcaaggtgctcgacgatgctga 494
              ||||||||||| |||||||| ||||||||
Sbjct: 135597 tccagctgcaatgtgctcgaagatgctga 135625
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>dbj|AP005394.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0620H05
          Length = 161808

 Score =  244 bits (123), Expect = 3e-61
 Identities = 267/315 (84%)
 Strand = Plus / Plus

                                                                         
Query: 94    atatgcatttgtacatcttccttgttctggtgtgcaggtaaattggcactgctgtacaag 153
             ||||||||||||||||||| |||| ||||||||| ||||   || ||||||||| ||| |
Sbjct: 31207 atatgcatttgtacatctttcttgctctggtgtgtaggtggtttagcactgctgcacagg 31266

                                                                         
Query: 154   aggttggtgctgcttgctctggacatttgacaagcaaatgaaccttttgaggacctcttt 213
             ||| |||||||||||| ||| ||||   |||| | |||||| ||||| |||| |||||| 
Sbjct: 31267 aggctggtgctgcttggtcttgacagcagacaggtaaatgatcctttcgagggcctcttc 31326

                                                                         
Query: 214   gttatcatcttgttgcatgtccttggtaagtgatttgaccgctgcttcatgcctaatcct 273
             | ||||||||||||||||| | |||| ||||||||||| || || |||||| ||| ||||
Sbjct: 31327 gctatcatcttgttgcatggctttggcaagtgatttgatcgttgattcatgtctagtcct 31386

                                                                         
Query: 274   gatgtatagctcttgcatgtcttcatcctcttgctgtaggtaacttcctttccaaggtct 333
             | || |||||| ||||| | ||||||||||||  ||||||||| || |||| ||||||| 
Sbjct: 31387 gctgcatagcttttgcacgccttcatcctcttattgtaggtaattttctttgcaaggtcc 31446

                                                                         
Query: 334   tgaagacatgtagcataagatatcgatgtgaatgattgggacttcccttggtagtacttg 393
             |||| ||||||||||| |||||||||||||||||||||||| || |||||||| || |||
Sbjct: 31447 tgaacacatgtagcatcagatatcgatgtgaatgattgggattttccttggtaatagttg 31506

                            
Query: 394   gacagccctgtcctg 408
             ||||||||| |||||
Sbjct: 31507 gacagccctctcctg 31521



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 466   tccagctgcaaggtgctcgacgatgctga 494
             ||||||||||| |||||||| ||||||||
Sbjct: 32115 tccagctgcaatgtgctcgaagatgctga 32143
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>dbj|AK068719.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162F05, full
           insert sequence
          Length = 1104

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 68/74 (91%)
 Strand = Plus / Minus

                                                                       
Query: 357 cgatgtgaatgattgggacttcccttggtagtacttggacagccctgtcctggcaggaag 416
           ||||||||| ||||||||||||||||||||||||||||| ||||||||||||  ||||||
Sbjct: 494 cgatgtgaaggattgggacttcccttggtagtacttggatagccctgtcctgagaggaag 435

                         
Query: 417 ctgggctagcagcg 430
           ||| || |||||||
Sbjct: 434 ctgcgccagcagcg 421
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>dbj|AK068350.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013142H05, full
           insert sequence
          Length = 1176

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 68/74 (91%)
 Strand = Plus / Minus

                                                                       
Query: 357 cgatgtgaatgattgggacttcccttggtagtacttggacagccctgtcctggcaggaag 416
           ||||||||| ||||||||||||||||||||||||||||| ||||||||||||  ||||||
Sbjct: 573 cgatgtgaaggattgggacttcccttggtagtacttggatagccctgtcctgagaggaag 514

                         
Query: 417 ctgggctagcagcg 430
           ||| || |||||||
Sbjct: 513 ctgcgccagcagcg 500
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                                    
Query: 357      cgatgtgaatgattgggacttcccttggtagtacttggacagccctgtcctg 408
                ||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 21025647 cgatgtgaaggattgggacttcccttggtagtacttggatagccctgtcctg 21025596
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>dbj|AP004739.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0090E14
          Length = 161119

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                                  
Query: 357    cgatgtgaatgattgggacttcccttggtagtacttggacagccctgtcctg 408
              ||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 152571 cgatgtgaaggattgggacttcccttggtagtacttggatagccctgtcctg 152520
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>dbj|AP003713.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0528E12
          Length = 139750

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                                 
Query: 357   cgatgtgaatgattgggacttcccttggtagtacttggacagccctgtcctg 408
             ||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 22648 cgatgtgaaggattgggacttcccttggtagtacttggatagccctgtcctg 22597
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>gb|AC138109.3| Mus musculus BAC clone RP24-444I15 from chromosome 1, complete sequence
          Length = 209820

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 39     gtatgttcattggaagtggag 59
              |||||||||||||||||||||
Sbjct: 121125 gtatgttcattggaagtggag 121105
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>dbj|AK143363.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN
            full-length enriched library, clone:E330015O06
            product:hypothetical protein, full insert sequence
          Length = 2644

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 39   gtatgttcattggaagtggag 59
            |||||||||||||||||||||
Sbjct: 2334 gtatgttcattggaagtggag 2354
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>gb|AY752342.1| Nesocichla eremita NADH dehydrogenase subunit 2 (ND2) gene,
           complete cds; mitochondrial
          Length = 1041

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 255 ctgcttcatgcctaatcctga 275
           |||||||||||||||||||||
Sbjct: 275 ctgcttcatgcctaatcctga 295
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>gb|AY739093.1| Takifugu rubripes frMUT, frGPR136L1, and frGPR136L2 genes, complete
              sequence; frRUNX2 (frRUNX2) gene, complete cds; and
              frCLIC5, frENPP5, frPHIP, frIRAK1BP1, and frTBX18 genes,
              complete sequence
          Length = 235024

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 307    ctgtaggtaacttcctttcc 326
              ||||||||||||||||||||
Sbjct: 227824 ctgtaggtaacttcctttcc 227843
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 244     tgatttgaccgctgcttcatgcctaatc 271
               ||||||||||||| ||||||||| ||||
Sbjct: 2707404 tgatttgaccgctccttcatgcccaatc 2707377
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>ref|XM_382320.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG02144.1)
           partial mRNA
          Length = 819

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 492 tgaagatgaccctgaagaac 511
           ||||||||||||||||||||
Sbjct: 279 tgaagatgaccctgaagaac 298
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>ref|XM_447173.1| Candida glabrata CBS138, CAGL0H08580g partial mRNA
          Length = 1866

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 277  gtatagctcttgcatgtcttcatc 300
            ||||||||||||||| ||||||||
Sbjct: 1122 gtatagctcttgcatatcttcatc 1099
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>gb|AC124259.6| Homo sapiens chromosome 11, clone RP11-21N2, complete sequence
          Length = 99973

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 289   catgtcttcatcctcttgct 308
             ||||||||||||||||||||
Sbjct: 48285 catgtcttcatcctcttgct 48266
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>ref|XM_662608.1| Cryptosporidium hominis TU502 protease (Chro.60016) partial mRNA
          Length = 4710

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 492  tgaagatgaccctgaagaac 511
            ||||||||||||||||||||
Sbjct: 4278 tgaagatgaccctgaagaac 4259
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>emb|AL353700.14| Human DNA sequence from clone RP3-350J21 on chromosome 6 Contains part
             of the DNAH8 gene for dynein axonemal heavy polypeptide 8
             and the 5' part of a novel gene, complete sequence
          Length = 56509

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    catttgtacatcttccttgt 118
             ||||||||||||||||||||
Sbjct: 22085 catttgtacatcttccttgt 22066
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 552     cgacgccaatgagcacaacgacgacccg 579
               ||||| |||||||| |||||||||||||
Sbjct: 2205195 cgacggcaatgagcgcaacgacgacccg 2205222
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>emb|AL035604.16|HS38C16 Human DNA sequence from clone RP1-38C16 on chromosome 6q22.33-24.1
             Contains a glyceraldehde-3-phosphate dehydrogenase (GAPD)
             pseudogene, a novel gene, a high-mobility group
             (non-histone chromosomal) protein 1-like 1 (HMG1L1)
             pseudogene and a novel gene, complete sequence
          Length = 139515

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 95    tatgcatttgtacatcttccttgt 118
             |||||||||||||| |||||||||
Sbjct: 46163 tatgcatttgtacaacttccttgt 46186
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>emb|CR380954.1| Candida glabrata strain CBS138 chromosome H complete sequence
          Length = 1050361

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 277    gtatagctcttgcatgtcttcatc 300
              ||||||||||||||| ||||||||
Sbjct: 841782 gtatagctcttgcatatcttcatc 841805
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>emb|BX538350.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 1/4
          Length = 287050

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 492   tgaagatgaccctgaagaac 511
             ||||||||||||||||||||
Sbjct: 16683 tgaagatgaccctgaagaac 16664
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>emb|AL031745.8|PFMAL1P2 Plasmodium falciparum DNA from MAL1P2
          Length = 384550

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 215    ttatcatcttgttgcatgtccttg 238
              ||||||||||||||||| ||||||
Sbjct: 258387 ttatcatcttgttgcatttccttg 258364
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>emb|AL731867.27| Mouse DNA sequence from clone RP23-73A4 on chromosome 11 Contains the
             5' end of the Kcnip1 gene for Kv channel-interacting
             protein 1, the Kcnmb1 gene for potassium large conductance
             calcium-activated channel, subfamily M, beta member 1 and
             the 3' end of a novel gene, complete sequence
          Length = 173783

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tgctgtatgttcattggaag 54
             ||||||||||||||||||||
Sbjct: 56631 tgctgtatgttcattggaag 56650
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>gb|AY821914.1| Didelphis virginiana blcap (Blcap) gene, complete cds
          Length = 14520

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 194  aaccttttgaggacctcttt 213
            ||||||||||||||||||||
Sbjct: 3813 aaccttttgaggacctcttt 3794
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>gb|AC152833.3| Ornithorhynchus anatinus BAC clone OABb-6A1 from chromosome unknown,
             complete sequence
          Length = 141309

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 617   ggtgatcttcttcttgccaa 636
             ||||||||||||||||||||
Sbjct: 50037 ggtgatcttcttcttgccaa 50056
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>gb|AC099329.2| Homo sapiens chromosome 3 clone RP11-70C1, complete sequence
          Length = 167667

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 121    tggtgtgcaggtaaattggcactg 144
              |||||||| |||||||||||||||
Sbjct: 160821 tggtgtgctggtaaattggcactg 160844
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>gb|AC044810.7| Homo sapiens chromosome 11, clone RP11-494M8, complete sequence
          Length = 194297

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 289    catgtcttcatcctcttgct 308
              ||||||||||||||||||||
Sbjct: 189044 catgtcttcatcctcttgct 189063
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>ref|XM_625346.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd6_60),
            partial mRNA
          Length = 4689

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 492  tgaagatgaccctgaagaac 511
            ||||||||||||||||||||
Sbjct: 4278 tgaagatgaccctgaagaac 4259
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>gb|AC092043.3| Homo sapiens chromosome 3 clone RP11-141M3, complete sequence
          Length = 176140

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 121   tggtgtgcaggtaaattggcactg 144
             |||||||| |||||||||||||||
Sbjct: 88184 tggtgtgctggtaaattggcactg 88207
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>ref|XM_395197.2| PREDICTED: Apis mellifera similar to ENSANGP00000021370 (LOC411729),
            mRNA
          Length = 3004

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 482  tcgacgatgctgaagatgac 501
            ||||||||||||||||||||
Sbjct: 1182 tcgacgatgctgaagatgac 1201
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>gb|AC154517.2| Mus musculus BAC clone RP24-85L11 from chromosome 12, complete sequence
          Length = 167631

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    agtgctgtatgttcattgga 52
             ||||||||||||||||||||
Sbjct: 36583 agtgctgtatgttcattgga 36602
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>emb|CT025539.18| Mouse DNA sequence from clone RP23-221K23 on chromosome 12,
           complete sequence
          Length = 167603

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 33  agtgctgtatgttcattgga 52
           ||||||||||||||||||||
Sbjct: 460 agtgctgtatgttcattgga 441
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>gb|AC007012.1|AC007012 Homo sapiens chromosome 16, clone 185J20, complete sequence
          Length = 168731

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 194   aaccttttgaggacctcttt 213
             ||||||||||||||||||||
Sbjct: 90700 aaccttttgaggacctcttt 90719
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>dbj|AP000926.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-762B21, complete
              sequence
          Length = 196972

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 194    aaccttttgaggacctcttt 213
              ||||||||||||||||||||
Sbjct: 127679 aaccttttgaggacctcttt 127660
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>emb|AL731554.13| Mouse DNA sequence from clone RP23-337H1 on chromosome 5, complete
              sequence
          Length = 159200

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    aggttggtgctgcttgctct 173
              ||||||||||||||||||||
Sbjct: 111235 aggttggtgctgcttgctct 111216


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,248,737
Number of Sequences: 3902068
Number of extensions: 5248737
Number of successful extensions: 99669
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99496
Number of HSP's gapped (non-prelim): 173
length of query: 637
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 614
effective length of database: 17,143,297,704
effective search space: 10525984790256
effective search space used: 10525984790256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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