ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd27e17 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK121220.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090H02, full insert sequence Length = 694 Score = 347 bits (175), Expect = 3e-92 Identities = 265/295 (89%) Strand = Plus / Minus Query: 243 tcatttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgat 302 |||||| |||||||| || |||||||||||||| || || || |||||||||||||| || Sbjct: 437 tcatttcgggttcctgagcacaatgatgaccgaatccccacgtaggaacatcttgctaat 378 Query: 303 gaacctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctc 362 |||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||| Sbjct: 377 gaacctgtccttgttcactggaagagccttcttcttgcctttaccagtctttggtacctc 318 Query: 363 agtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcat 422 |||||||||||||||||| ||||| ||||||||||||||||| || |||||||| |||| Sbjct: 317 agtccacatctccctaacattctcaagaaccatgttgcaatggcgatcaaatgccctcac 258 Query: 423 gcgaccaagtagcttcttgttgttccggcagttgataagtacctgggtattgttcttgac 482 |||||||| | |||||||||||||||||| |||||||| |||||||| |||||||| || Sbjct: 257 acgaccaagcaacttcttgttgttccggcaattgataagcacctgggtgttgttcttcac 198 Query: 483 gctcatcatgagcagggacaggggcccggtgctgaactcctcctcctccttcttc 537 ||||||||| |||| |||||| ||||| || ||||| |||||||||||||||||| Sbjct: 197 gctcatcatcagcacggacagcggccccgtactgaattcctcctcctccttcttc 143
>gb|AY103713.1| Zea mays PCO076540 mRNA sequence Length = 785 Score = 196 bits (99), Expect = 7e-47 Identities = 243/291 (83%) Strand = Plus / Minus Query: 247 ttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgatgaac 306 ||||||||||| || || ||||||||||||||||| | ||||||||||||||||||||| Sbjct: 457 ttggggttcctcagcacgatgatgaccgagtcgcccctgaggaacatcttgctgatgaat 398 Query: 307 ctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtc 366 || ||||||||||| || || |||||||| ||||| ||||||||||| || ||||| ||| Sbjct: 397 ctatccttgttcacaggcagagccttctttttgcccttgccagtcttggggacctctgtc 338 Query: 367 cacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcatgcga 426 |||||||||| ||||||||||| |||||||| || || || ||||| || | | || Sbjct: 337 cacatctcccgcacgttctcgagcaccatgttacagtggcgatcaaaagcacgaacccgg 278 Query: 427 ccaagtagcttcttgttgttccggcagttgataagtacctgggtattgttcttgacgctc 486 ||||| |||||||||||||| ||||| ||||| || |||||||| |||||||| || ||| Sbjct: 277 ccaagcagcttcttgttgttgcggcaattgatgagaacctgggtgttgttcttaacactc 218 Query: 487 atcatgagcagggacaggggcccggtgctgaactcctcctcctccttcttc 537 ||||| || | ||||| || || ||||| || ||||| ||||| |||||| Sbjct: 217 atcattagtactgacagagggcctgtgctaaattcctcttcctctttcttc 167
>dbj|AK105062.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-B09, full insert sequence Length = 360 Score = 190 bits (96), Expect = 4e-45 Identities = 132/144 (91%) Strand = Plus / Minus Query: 243 tcatttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgat 302 |||||| |||||||| || |||||||||||||| || || || |||||||||||||| || Sbjct: 145 tcatttcgggttcctgagcacaatgatgaccgaatccccacgtaggaacatcttgctaat 86 Query: 303 gaacctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctc 362 |||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||| Sbjct: 85 gaacctgtccttgttcactggaagagccttcttcttgcctttaccagtctttggtacctc 26 Query: 363 agtccacatctccctaacgttctc 386 |||||||||||||||||| ||||| Sbjct: 25 agtccacatctccctaacattctc 2
>ref|NM_189410.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 153 Score = 186 bits (94), Expect = 7e-44 Identities = 124/134 (92%) Strand = Plus / Minus Query: 262 acaatgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcact 321 ||||||||||||||||| || || |||||||||||||||||||||||||||||||||||| Sbjct: 134 acaatgatgaccgagtccccacgtaggaacatcttgctgatgaacctgtccttgttcact 75 Query: 322 ggaagggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacg 381 ||||| ||||||||||||||||| ||||||||||| ||||| |||||||||||||| || Sbjct: 74 ggaagagccttcttcttgcctttaccagtctttggtacctcggtccacatctccctgaca 15 Query: 382 ttctcgagaaccat 395 ||||| |||||||| Sbjct: 14 ttctcaagaaccat 1
>ref|NM_180146.3| Arabidopsis thaliana unknown protein AT2G47640 transcript variant AT2G47640.2 mRNA, complete cds Length = 586 Score = 151 bits (76), Expect = 4e-33 Identities = 235/288 (81%) Strand = Plus / Minus Query: 243 tcatttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgat 302 |||||| || ||||| || || || ||||||||||| || || || ||||||||||| || Sbjct: 418 tcattttggattcctgaggacgataatgaccgagtctccacgtagaaacatcttgcttat 359 Query: 303 gaacctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctc 362 ||||| || ||||||| ||||| || |||||||||||||| ||||| || |||||||| Sbjct: 358 gaaccgatctctgttcaccggaagtgctttcttcttgcctttcccagttttcggaacctc 299 Query: 363 agtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcat 422 |||||||||||| || || || || |||||||||||||| || | |||||| || |||| Sbjct: 298 agtccacatctctctgacattttcaagaaccatgttgcagtgtctgtcaaacgccctcac 239 Query: 423 gcgaccaagtagcttcttgttgttccggcagttgataagtacctgggtattgttcttgac 482 || ||||| || ||| ||||||||||||| ||||| | ||||| || || |||||||| Sbjct: 238 tcgcccaagaagtttcctgttgttccggcaattgattaaaacctgagtgttattcttgac 179 Query: 483 gctcatcatgagcagggacaggggcccggtgctgaactcctcctcctc 530 ||||||||| || | || || ||||||||| |||| ||||| ||||| Sbjct: 178 gctcatcataagaacagagagtggcccggtgttgaattcctcttcctc 131
>ref|NM_201981.2| Arabidopsis thaliana unknown protein AT2G47640 transcript variant AT2G47640.3 mRNA, complete cds Length = 594 Score = 151 bits (76), Expect = 4e-33 Identities = 235/288 (81%) Strand = Plus / Minus Query: 243 tcatttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgat 302 |||||| || ||||| || || || ||||||||||| || || || ||||||||||| || Sbjct: 426 tcattttggattcctgaggacgataatgaccgagtctccacgtagaaacatcttgcttat 367 Query: 303 gaacctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctc 362 ||||| || ||||||| ||||| || |||||||||||||| ||||| || |||||||| Sbjct: 366 gaaccgatctctgttcaccggaagtgctttcttcttgcctttcccagttttcggaacctc 307 Query: 363 agtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcat 422 |||||||||||| || || || || |||||||||||||| || | |||||| || |||| Sbjct: 306 agtccacatctctctgacattttcaagaaccatgttgcagtgtctgtcaaacgccctcac 247 Query: 423 gcgaccaagtagcttcttgttgttccggcagttgataagtacctgggtattgttcttgac 482 || ||||| || ||| ||||||||||||| ||||| | ||||| || || |||||||| Sbjct: 246 tcgcccaagaagtttcctgttgttccggcaattgattaaaacctgagtgttattcttgac 187 Query: 483 gctcatcatgagcagggacaggggcccggtgctgaactcctcctcctc 530 ||||||||| || | || || ||||||||| |||| ||||| ||||| Sbjct: 186 gctcatcataagaacagagagtggcccggtgttgaattcctcttcctc 139
>ref|NM_130332.2| Arabidopsis thaliana unknown protein AT2G47640 transcript variant AT2G47640.1 mRNA, complete cds Length = 624 Score = 151 bits (76), Expect = 4e-33 Identities = 235/288 (81%) Strand = Plus / Minus Query: 243 tcatttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgat 302 |||||| || ||||| || || || ||||||||||| || || || ||||||||||| || Sbjct: 456 tcattttggattcctgaggacgataatgaccgagtctccacgtagaaacatcttgcttat 397 Query: 303 gaacctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctc 362 ||||| || ||||||| ||||| || |||||||||||||| ||||| || |||||||| Sbjct: 396 gaaccgatctctgttcaccggaagtgctttcttcttgcctttcccagttttcggaacctc 337 Query: 363 agtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcat 422 |||||||||||| || || || || |||||||||||||| || | |||||| || |||| Sbjct: 336 agtccacatctctctgacattttcaagaaccatgttgcagtgtctgtcaaacgccctcac 277 Query: 423 gcgaccaagtagcttcttgttgttccggcagttgataagtacctgggtattgttcttgac 482 || ||||| || ||| ||||||||||||| ||||| | ||||| || || |||||||| Sbjct: 276 tcgcccaagaagtttcctgttgttccggcaattgattaaaacctgagtgttattcttgac 217 Query: 483 gctcatcatgagcagggacaggggcccggtgctgaactcctcctcctc 530 ||||||||| || | || || ||||||||| |||| ||||| ||||| Sbjct: 216 gctcatcataagaacagagagtggcccggtgttgaattcctcttcctc 169
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 151 bits (76), Expect = 4e-33 Identities = 94/100 (94%) Strand = Plus / Plus Query: 262 acaatgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcact 321 ||||||||||||||||| || || |||||||||||||||||||||||||||||||||||| Sbjct: 42631233 acaatgatgaccgagtccccacgtaggaacatcttgctgatgaacctgtccttgttcact 42631292 Query: 322 ggaagggccttcttcttgcctttgccagtctttggaacct 361 ||||| ||||||||||||||||| ||||||||||| |||| Sbjct: 42631293 ggaagagccttcttcttgcctttaccagtctttggtacct 42631332 Score = 97.6 bits (49), Expect = 5e-17 Identities = 94/109 (86%) Strand = Plus / Plus Query: 358 acctcagtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgct 417 ||||| |||||||||||||| || ||||| ||||||||||||||||| | |||||||| Sbjct: 42631421 acctcggtccacatctccctgacattctcaagaaccatgttgcaatggctatcaaatgcc 42631480 Query: 418 ctcatgcgaccaagtagcttcttgttgttccggcagttgataagtacct 466 |||| ||||| |||| ||||||||||||| |||| |||||||| |||| Sbjct: 42631481 ctcacacgacctagtaacttcttgttgttctggcaattgataagcacct 42631529 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttcac 539 ||||||||||||||||||||| Sbjct: 18074093 ctcctcctcctccttcttcac 18074073 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 gaactcctcctcctccttct 535 |||||||||||||||||||| Sbjct: 25297924 gaactcctcctcctccttct 25297943
>emb|BX821379.1|CNS0AA65 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL37ZF02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 586 Score = 151 bits (76), Expect = 4e-33 Identities = 235/288 (81%) Strand = Plus / Minus Query: 243 tcatttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgat 302 |||||| || ||||| || || || ||||||||||| || || || ||||||||||| || Sbjct: 426 tcattttggattcctgaggacgataatgaccgagtctccacgtagaaacatcttgcttat 367 Query: 303 gaacctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctc 362 ||||| || ||||||| ||||| || |||||||||||||| ||||| || |||||||| Sbjct: 366 gaaccgatctctgttcaccggaagtgctttcttcttgcctttcccagttttcggaacctc 307 Query: 363 agtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcat 422 |||||||||||| || || || || |||||||||||||| || | |||||| || |||| Sbjct: 306 agtccacatctctctgacattttcaagaaccatgttgcagtgtctgtcaaacgccctcac 247 Query: 423 gcgaccaagtagcttcttgttgttccggcagttgataagtacctgggtattgttcttgac 482 || ||||| || ||| ||||||||||||| ||||| | ||||| || || |||||||| Sbjct: 246 tcgcccaagaagtttcctgttgttccggcaattgattaaaacctgagtgttattcttgac 187 Query: 483 gctcatcatgagcagggacaggggcccggtgctgaactcctcctcctc 530 ||||||||| || | || || ||||||||| |||| ||||| ||||| Sbjct: 186 gctcatcataagaacagagagtggcccggtgttgaattcctcttcctc 139
>dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0458E05 Length = 193577 Score = 151 bits (76), Expect = 4e-33 Identities = 94/100 (94%) Strand = Plus / Plus Query: 262 acaatgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcact 321 ||||||||||||||||| || || |||||||||||||||||||||||||||||||||||| Sbjct: 152116 acaatgatgaccgagtccccacgtaggaacatcttgctgatgaacctgtccttgttcact 152175 Query: 322 ggaagggccttcttcttgcctttgccagtctttggaacct 361 ||||| ||||||||||||||||| ||||||||||| |||| Sbjct: 152176 ggaagagccttcttcttgcctttaccagtctttggtacct 152215 Score = 97.6 bits (49), Expect = 5e-17 Identities = 94/109 (86%) Strand = Plus / Plus Query: 358 acctcagtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgct 417 ||||| |||||||||||||| || ||||| ||||||||||||||||| | |||||||| Sbjct: 152304 acctcggtccacatctccctgacattctcaagaaccatgttgcaatggctatcaaatgcc 152363 Query: 418 ctcatgcgaccaagtagcttcttgttgttccggcagttgataagtacct 466 |||| ||||| |||| ||||||||||||| |||| |||||||| |||| Sbjct: 152364 ctcacacgacctagtaacttcttgttgttctggcaattgataagcacct 152412
>gb|BT004783.1| Arabidopsis thaliana At2g47640 gene, complete cds Length = 327 Score = 151 bits (76), Expect = 4e-33 Identities = 235/288 (81%) Strand = Plus / Minus Query: 243 tcatttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgat 302 |||||| || ||||| || || || ||||||||||| || || || ||||||||||| || Sbjct: 327 tcattttggattcctgaggacgataatgaccgagtctccacgtagaaacatcttgcttat 268 Query: 303 gaacctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctc 362 ||||| || ||||||| ||||| || |||||||||||||| ||||| || |||||||| Sbjct: 267 gaaccgatctctgttcaccggaagtgctttcttcttgcctttcccagttttcggaacctc 208 Query: 363 agtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcat 422 |||||||||||| || || || || |||||||||||||| || | |||||| || |||| Sbjct: 207 agtccacatctctctgacattttcaagaaccatgttgcagtgtctgtcaaacgccctcac 148 Query: 423 gcgaccaagtagcttcttgttgttccggcagttgataagtacctgggtattgttcttgac 482 || ||||| || ||| ||||||||||||| ||||| | ||||| || || |||||||| Sbjct: 147 tcgcccaagaagtttcctgttgttccggcaattgattaaaacctgagtgttattcttgac 88 Query: 483 gctcatcatgagcagggacaggggcccggtgctgaactcctcctcctc 530 ||||||||| || | || || ||||||||| |||| ||||| ||||| Sbjct: 87 gctcatcataagaacagagagtggcccggtgttgaattcctcttcctc 40
>gb|AY086601.1| Arabidopsis thaliana clone 26123 mRNA, complete sequence Length = 619 Score = 151 bits (76), Expect = 4e-33 Identities = 235/288 (81%) Strand = Plus / Minus Query: 243 tcatttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgat 302 |||||| || ||||| || || || ||||||||||| || || || ||||||||||| || Sbjct: 451 tcattttggattcctgaggacgataatgaccgagtctccacgtagaaacatcttgcttat 392 Query: 303 gaacctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctc 362 ||||| || ||||||| ||||| || |||||||||||||| ||||| || |||||||| Sbjct: 391 gaaccgatctctgttcaccggaagtgctttcttcttgcctttcccagttttcggaacctc 332 Query: 363 agtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcat 422 |||||||||||| || || || || |||||||||||||| || | |||||| || |||| Sbjct: 331 agtccacatctctctgacattttcaagaaccatgttgcagtgtctgtcaaacgccctcac 272 Query: 423 gcgaccaagtagcttcttgttgttccggcagttgataagtacctgggtattgttcttgac 482 || ||||| || ||| ||||||||||||| ||||| | ||||| || || |||||||| Sbjct: 271 tcgcccaagaagtttcctgttgttccggcaattgattaaaacctgagtgttattcttgac 212 Query: 483 gctcatcatgagcagggacaggggcccggtgctgaactcctcctcctc 530 ||||||||| || | || || ||||||||| |||| ||||| ||||| Sbjct: 211 gctcatcataagaacagagagtggcccggtgttgaattcctcttcctc 164
>gb|AC104271.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1308_D01, complete sequence Length = 117724 Score = 149 bits (75), Expect = 2e-32 Identities = 108/119 (90%) Strand = Plus / Plus Query: 243 tcatttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgat 302 |||||| |||||||| || |||||||||||||| || || || |||||||||||||| || Sbjct: 45272 tcatttcgggttcctgagcacaatgatgaccgaatccccacgtaggaacatcttgctaat 45331 Query: 303 gaacctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacct 361 |||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||| Sbjct: 45332 gaacctgtccttgttcactggaagagccttcttcttgcctttaccagtctttggtacct 45390 Score = 129 bits (65), Expect = 1e-26 Identities = 98/109 (89%) Strand = Plus / Plus Query: 358 acctcagtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgct 417 ||||||||||||||||||||||| ||||| ||||||||||||||||| || |||||||| Sbjct: 45473 acctcagtccacatctccctaacattctcaagaaccatgttgcaatggcgatcaaatgcc 45532 Query: 418 ctcatgcgaccaagtagcttcttgttgttccggcagttgataagtacct 466 |||| |||||||| | |||||||||||||||||| |||||||| |||| Sbjct: 45533 ctcacacgaccaagcaacttcttgttgttccggcaattgataagcacct 45581 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 463 acctgggtattgttcttgacgctcatcatgagcagggacaggggcccggtgctgaactcc 522 |||||||| |||||||| ||||||||||| |||| |||||| ||||| || ||||| ||| Sbjct: 47190 acctgggtgttgttcttcacgctcatcatcagcacggacagcggccccgtactgaattcc 47249 Query: 523 tcctcctccttcttc 537 ||||||||||||||| Sbjct: 47250 tcctcctccttcttc 47264
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 149 bits (75), Expect = 2e-32 Identities = 108/119 (90%) Strand = Plus / Plus Query: 243 tcatttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgat 302 |||||| |||||||| || |||||||||||||| || || || |||||||||||||| || Sbjct: 14316486 tcatttcgggttcctgagcacaatgatgaccgaatccccacgtaggaacatcttgctaat 14316545 Query: 303 gaacctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacct 361 |||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||| Sbjct: 14316546 gaacctgtccttgttcactggaagagccttcttcttgcctttaccagtctttggtacct 14316604 Score = 129 bits (65), Expect = 1e-26 Identities = 98/109 (89%) Strand = Plus / Plus Query: 358 acctcagtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgct 417 ||||||||||||||||||||||| ||||| ||||||||||||||||| || |||||||| Sbjct: 14316687 acctcagtccacatctccctaacattctcaagaaccatgttgcaatggcgatcaaatgcc 14316746 Query: 418 ctcatgcgaccaagtagcttcttgttgttccggcagttgataagtacct 466 |||| |||||||| | |||||||||||||||||| |||||||| |||| Sbjct: 14316747 ctcacacgaccaagcaacttcttgttgttccggcaattgataagcacct 14316795 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 463 acctgggtattgttcttgacgctcatcatgagcagggacaggggcccggtgctgaactcc 522 |||||||| |||||||| ||||||||||| |||| |||||| ||||| || ||||| ||| Sbjct: 14318404 acctgggtgttgttcttcacgctcatcatcagcacggacagcggccccgtactgaattcc 14318463 Query: 523 tcctcctccttcttc 537 ||||||||||||||| Sbjct: 14318464 tcctcctccttcttc 14318478
>gb|AY610377.1| Sus scrofa clone reli1115b_h17.y1.abd, mRNA sequence Length = 415 Score = 123 bits (62), Expect = 9e-25 Identities = 216/266 (81%), Gaps = 1/266 (0%) Strand = Plus / Minus Query: 267 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 326 |||||||||||| ||||| |||||||||||| |||| | | ||||||||| || || Sbjct: 373 gatgaccgagtccccgcgcaggaacatcttggagatgtagcggtccttgttgacgggctt 314 Query: 327 ggccttcttcttgc-ctttgccagtctttggaacctcagtccacatctccctaacgttct 385 || ||||||||||| | ||||| |||| || |||||||||||||||||| | ||||||| Sbjct: 313 ggacttcttcttgcaccttgccgctcttggggacctcagtccacatctccttcacgttct 254 Query: 386 cgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgt 445 | || ||||||||||| || | |||||| || ||| ||| || || ||||||||||||| Sbjct: 253 ccagcaccatgttgcagtgcctgtcaaaggccttcacgcggcccaggagcttcttgttgt 194 Query: 446 tccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacaggg 505 | ||||||||||| || || ||||| ||||||||||| | |||||| |||||| | Sbjct: 193 tgcggcagttgatgagcacttgggtgttgttcttgaccgactgtgtgagcacggacagcg 134 Query: 506 gcccggtgctgaactcctcctcctcc 531 |||| ||| | ||||||||||||||| Sbjct: 133 gccccgtgttaaactcctcctcctcc 108
>gb|AC151604.2| Emiliania huxleyi clone JGIACCU-13A1, complete sequence Length = 36530 Score = 117 bits (59), Expect = 5e-23 Identities = 215/267 (80%) Strand = Plus / Plus Query: 265 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 324 ||||||||||||||||| | ||||||||||| |||||| | ||| ||||| || || Sbjct: 3010 atgatgaccgagtcgcctctcaggaacatcttcgagatgaagcggtctttgttgacgggc 3069 Query: 325 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 384 ||||||||| ||| ||||| | || |||||||| |||||||||||| | |||||| Sbjct: 3070 ttggccttcttgacgcccttgccctttttgggaacctccgtccacatctccttgacgttc 3129 Query: 385 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 444 ||||| ||||||||||| || |||||||| || | | ||| || || |||||||||||| Sbjct: 3130 tcgagcaccatgttgcagtgccggtcaaaggccttgacgcggccgagcagcttcttgttg 3189 Query: 445 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 504 || ||||||||||| || ||||| || ||| |||||||||| | |||||| || || Sbjct: 3190 ttgcggcagttgatgagcacctgcgtgttggacttgacgctctgcgtgagcaccgagagc 3249 Query: 505 ggcccggtgctgaactcctcctcctcc 531 ||||||||| |||||||||||||||| Sbjct: 3250 ggcccggtgtggaactcctcctcctcc 3276
>emb|CR714634.2|CNS0GED2 Tetraodon nigroviridis full-length cDNA Length = 610 Score = 115 bits (58), Expect = 2e-22 Identities = 214/266 (80%) Strand = Plus / Minus Query: 265 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 324 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 401 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 342 Query: 325 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 384 || |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 341 ttggacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 282 Query: 385 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 444 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 281 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 222 Query: 445 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 504 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 221 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 162 Query: 505 ggcccggtgctgaactcctcctcctc 530 ||||| ||| |||||||||||||||| Sbjct: 161 ggccccgtgttgaactcctcctcctc 136
>emb|CR709252.2|CNS0GA7K Tetraodon nigroviridis full-length cDNA Length = 634 Score = 115 bits (58), Expect = 2e-22 Identities = 214/266 (80%) Strand = Plus / Minus Query: 265 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 324 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 420 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 361 Query: 325 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 384 || |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 360 ttggacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 301 Query: 385 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 444 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 300 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 241 Query: 445 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 504 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 240 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 181 Query: 505 ggcccggtgctgaactcctcctcctc 530 ||||| ||| |||||||||||||||| Sbjct: 180 ggccccgtgttgaactcctcctcctc 155
>emb|CR707901.2|CNS0G961 Tetraodon nigroviridis full-length cDNA Length = 630 Score = 115 bits (58), Expect = 2e-22 Identities = 214/266 (80%) Strand = Plus / Minus Query: 265 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 324 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 416 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 357 Query: 325 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 384 || |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 356 ttggacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 297 Query: 385 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 444 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 296 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 237 Query: 445 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 504 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 236 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 177 Query: 505 ggcccggtgctgaactcctcctcctc 530 ||||| ||| |||||||||||||||| Sbjct: 176 ggccccgtgttgaactcctcctcctc 151
>ref|XM_512755.1| PREDICTED: Pan troglodytes LOC456134 (LOC456134), mRNA Length = 393 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Minus Query: 267 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 326 |||||||||||| ||||| |||||||||||| |||| | | ||| ||||| ||||| Sbjct: 342 gatgaccgagtccccgcgcaggaacatcttggagatgtagcggtctttgttgactggctt 283 Query: 327 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 386 || |||||||||||| ||||| |||| || |||||||||||||||||| | |||||||| Sbjct: 282 ggacttcttcttgcccttgccgctcttgggtacctcagtccacatctccttcacgttctc 223 Query: 387 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 446 || ||||||||||| || | || || || ||| ||| || || || ||||| ||||| Sbjct: 222 cagcaccatgttgcagtgcctatcgaaggccttcacgcggcccaggagtttcttattgtt 163 Query: 447 ccggcagttgataagtacctgggtattgttcttgac 482 ||||||||||| || || ||||||||||||||||| Sbjct: 162 gcggcagttgatgagcacttgggtattgttcttgac 127
>gb|BC000486.2| Homo sapiens small nuclear ribonucleoprotein D2 polypeptide 16.5kDa, transcript variant 1, mRNA (cDNA clone MGC:8353 IMAGE:2819767), complete cds Length = 492 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Minus Query: 267 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 326 |||||| ||||| ||||| |||||||||||| |||| | | ||| ||||| ||||| Sbjct: 347 gatgactgagtccccgcgcaggaacatcttggagatgtagcggtctttgttgactggctt 288 Query: 327 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 386 || |||||||||||| |||||| |||| || |||||||||||||||||| | |||||||| Sbjct: 287 ggacttcttcttgcccttgccactcttgggtacctcagtccacatctccttcacgttctc 228 Query: 387 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 446 || ||||||||||| || | || || || ||| ||| || || || ||||| ||||| Sbjct: 227 cagcaccatgttgcagtgcctatcgaaggccttcacgcggcccaggagtttcttattgtt 168 Query: 447 ccggcagttgataagtacctgggtattgttcttgac 482 ||||||||||| || || ||||||||||||||||| Sbjct: 167 gcggcagttgatgagcacttgggtattgttcttgac 132
>gb|BC001930.2| Homo sapiens small nuclear ribonucleoprotein D2 polypeptide 16.5kDa, transcript variant 1, mRNA (cDNA clone MGC:3995 IMAGE:2819767), complete cds Length = 470 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Minus Query: 267 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 326 |||||| ||||| ||||| |||||||||||| |||| | | ||| ||||| ||||| Sbjct: 325 gatgactgagtccccgcgcaggaacatcttggagatgtagcggtctttgttgactggctt 266 Query: 327 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 386 || |||||||||||| |||||| |||| || |||||||||||||||||| | |||||||| Sbjct: 265 ggacttcttcttgcccttgccactcttgggtacctcagtccacatctccttcacgttctc 206 Query: 387 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 446 || ||||||||||| || | || || || ||| ||| || || || ||||| ||||| Sbjct: 205 cagcaccatgttgcagtgcctatcgaaggccttcacgcggcccaggagtttcttattgtt 146 Query: 447 ccggcagttgataagtacctgggtattgttcttgac 482 ||||||||||| || || ||||||||||||||||| Sbjct: 145 gcggcagttgatgagcacttgggtattgttcttgac 110
>ref|NM_177542.1| Homo sapiens small nuclear ribonucleoprotein D2 polypeptide 16.5kDa (SNRPD2), transcript variant 2, mRNA Length = 876 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Minus Query: 267 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 326 |||||| ||||| ||||| |||||||||||| |||| | | ||| ||||| ||||| Sbjct: 731 gatgactgagtccccgcgcaggaacatcttggagatgtagcggtctttgttgactggctt 672 Query: 327 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 386 || |||||||||||| |||||| |||| || |||||||||||||||||| | |||||||| Sbjct: 671 ggacttcttcttgcccttgccactcttgggtacctcagtccacatctccttcacgttctc 612 Query: 387 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 446 || ||||||||||| || | || || || ||| ||| || || || ||||| ||||| Sbjct: 611 cagcaccatgttgcagtgcctatcgaaggccttcacgcggcccaggagtttcttattgtt 552 Query: 447 ccggcagttgataagtacctgggtattgttcttgac 482 ||||||||||| || || ||||||||||||||||| Sbjct: 551 gcggcagttgatgagcacttgggtattgttcttgac 516
>ref|NM_004597.4| Homo sapiens small nuclear ribonucleoprotein D2 polypeptide 16.5kDa (SNRPD2), transcript variant 1, mRNA Length = 762 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Minus Query: 267 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 326 |||||| ||||| ||||| |||||||||||| |||| | | ||| ||||| ||||| Sbjct: 617 gatgactgagtccccgcgcaggaacatcttggagatgtagcggtctttgttgactggctt 558 Query: 327 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 386 || |||||||||||| |||||| |||| || |||||||||||||||||| | |||||||| Sbjct: 557 ggacttcttcttgcccttgccactcttgggtacctcagtccacatctccttcacgttctc 498 Query: 387 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 446 || ||||||||||| || | || || || ||| ||| || || || ||||| ||||| Sbjct: 497 cagcaccatgttgcagtgcctatcgaaggccttcacgcggcccaggagtttcttattgtt 438 Query: 447 ccggcagttgataagtacctgggtattgttcttgac 482 ||||||||||| || || ||||||||||||||||| Sbjct: 437 gcggcagttgatgagcacttgggtattgttcttgac 402
>gb|BC051368.1| Homo sapiens cDNA clone IMAGE:3956684, **** WARNING: chimeric clone **** Length = 1322 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Plus Query: 267 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 326 |||||| ||||| ||||| |||||||||||| |||| | | ||| ||||| ||||| Sbjct: 166 gatgactgagtccccgcgcaggaacatcttggagatgtagcggtctttgttgactggctt 225 Query: 327 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 386 || |||||||||||| |||||| |||| || |||||||||||||||||| | |||||||| Sbjct: 226 ggacttcttcttgcccttgccactcttgggtacctcagtccacatctccttcacgttctc 285 Query: 387 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 446 || ||||||||||| || | || || || ||| ||| || || || ||||| ||||| Sbjct: 286 cagcaccatgttgcagtgcctatcgaaggccttcacgcggcccaggagtttcttattgtt 345 Query: 447 ccggcagttgataagtacctgggtattgttcttgac 482 ||||||||||| || || ||||||||||||||||| Sbjct: 346 gcggcagttgatgagcacttgggtattgttcttgac 381
>gb|AY894074.1| Synthetic construct Homo sapiens clone FLH131151.01L small nuclear ribonucleoprotein D2 polypeptide (SNRPD2) mRNA, partial cds Length = 357 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Minus Query: 267 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 326 |||||| ||||| ||||| |||||||||||| |||| | | ||| ||||| ||||| Sbjct: 321 gatgactgagtccccgcgcaggaacatcttggagatgtagcggtctttgttgactggctt 262 Query: 327 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 386 || |||||||||||| |||||| |||| || |||||||||||||||||| | |||||||| Sbjct: 261 ggacttcttcttgcccttgccactcttgggtacctcagtccacatctccttcacgttctc 202 Query: 387 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 446 || ||||||||||| || | || || || ||| ||| || || || ||||| ||||| Sbjct: 201 cagcaccatgttgcagtgcctatcgaaggccttcacgcggcccaggagtttcttattgtt 142 Query: 447 ccggcagttgataagtacctgggtattgttcttgac 482 ||||||||||| || || ||||||||||||||||| Sbjct: 141 gcggcagttgatgagcacttgggtattgttcttgac 106
>gb|U15008.1|HSU15008 Human SnRNP core protein Sm D2 mRNA, complete cds Length = 479 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Minus Query: 267 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 326 |||||| ||||| ||||| |||||||||||| |||| | | ||| ||||| ||||| Sbjct: 351 gatgactgagtccccgcgcaggaacatcttggagatgtagcggtctttgttgactggctt 292 Query: 327 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 386 || |||||||||||| |||||| |||| || |||||||||||||||||| | |||||||| Sbjct: 291 ggacttcttcttgcccttgccactcttgggtacctcagtccacatctccttcacgttctc 232 Query: 387 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 446 || ||||||||||| || | || || || ||| ||| || || || ||||| ||||| Sbjct: 231 cagcaccatgttgcagtgcctatcgaaggccttcacgcggcccaggagtttcttattgtt 172 Query: 447 ccggcagttgataagtacctgggtattgttcttgac 482 ||||||||||| || || ||||||||||||||||| Sbjct: 171 gcggcagttgatgagcacttgggtattgttcttgac 136
>emb|CR718739.2|CNS0GHIX Tetraodon nigroviridis full-length cDNA Length = 630 Score = 107 bits (54), Expect = 5e-20 Identities = 213/266 (80%) Strand = Plus / Minus Query: 265 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 324 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 416 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 357 Query: 325 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 384 | |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 356 ttagacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 297 Query: 385 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 444 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 296 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 237 Query: 445 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 504 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 236 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 177 Query: 505 ggcccggtgctgaactcctcctcctc 530 ||||| ||| |||||||||||||||| Sbjct: 176 ggccccgtgttgaactcctcctcctc 151
>emb|CR711244.2|CNS0GBQW Tetraodon nigroviridis full-length cDNA Length = 604 Score = 107 bits (54), Expect = 5e-20 Identities = 213/266 (80%) Strand = Plus / Minus Query: 265 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 324 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 395 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 336 Query: 325 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 384 | |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 335 ttagacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 276 Query: 385 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 444 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 275 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 216 Query: 445 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 504 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 215 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 156 Query: 505 ggcccggtgctgaactcctcctcctc 530 ||||| ||| |||||||||||||||| Sbjct: 155 ggccccgtgttgaactcctcctcctc 130
>emb|CR711029.2|CNS0GBKX Tetraodon nigroviridis full-length cDNA Length = 626 Score = 107 bits (54), Expect = 5e-20 Identities = 213/266 (80%) Strand = Plus / Minus Query: 265 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 324 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 412 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 353 Query: 325 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 384 | |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 352 ttagacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 293 Query: 385 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 444 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 292 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 233 Query: 445 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 504 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 232 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 173 Query: 505 ggcccggtgctgaactcctcctcctc 530 ||||| ||| |||||||||||||||| Sbjct: 172 ggccccgtgttgaactcctcctcctc 147
>emb|CR684049.2|CNS0FQRH Tetraodon nigroviridis full-length cDNA Length = 610 Score = 107 bits (54), Expect = 5e-20 Identities = 213/266 (80%) Strand = Plus / Minus Query: 265 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 324 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 404 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 345 Query: 325 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 384 | |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 344 ttagacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 285 Query: 385 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 444 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 284 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 225 Query: 445 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 504 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 224 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 165 Query: 505 ggcccggtgctgaactcctcctcctc 530 ||||| ||| |||||||||||||||| Sbjct: 164 ggccccgtgttgaactcctcctcctc 139
>emb|CR666668.2|CNS0FDDE Tetraodon nigroviridis full-length cDNA Length = 598 Score = 107 bits (54), Expect = 5e-20 Identities = 213/266 (80%) Strand = Plus / Minus Query: 265 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 324 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 392 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 333 Query: 325 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 384 | |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 332 ttagacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 273 Query: 385 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 444 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 272 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 213 Query: 445 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 504 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 212 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 153 Query: 505 ggcccggtgctgaactcctcctcctc 530 ||||| ||| |||||||||||||||| Sbjct: 152 ggccccgtgttgaactcctcctcctc 127
>emb|CR662559.2|CNS0FA79 Tetraodon nigroviridis full-length cDNA Length = 622 Score = 107 bits (54), Expect = 5e-20 Identities = 213/266 (80%) Strand = Plus / Minus Query: 265 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 324 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 416 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 357 Query: 325 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 384 | |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 356 ttagacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 297 Query: 385 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 444 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 296 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 237 Query: 445 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 504 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 236 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 177 Query: 505 ggcccggtgctgaactcctcctcctc 530 ||||| ||| |||||||||||||||| Sbjct: 176 ggccccgtgttgaactcctcctcctc 151
>emb|CR662545.2|CNS0FA6V Tetraodon nigroviridis full-length cDNA Length = 616 Score = 107 bits (54), Expect = 5e-20 Identities = 213/266 (80%) Strand = Plus / Minus Query: 265 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 324 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 411 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 352 Query: 325 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 384 | |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 351 ttagacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 292 Query: 385 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 444 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 291 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 232 Query: 445 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 504 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 231 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 172 Query: 505 ggcccggtgctgaactcctcctcctc 530 ||||| ||| |||||||||||||||| Sbjct: 171 ggccccgtgttgaactcctcctcctc 146
>emb|CR655397.2|CNS0F4OB Tetraodon nigroviridis full-length cDNA Length = 618 Score = 107 bits (54), Expect = 5e-20 Identities = 213/266 (80%) Strand = Plus / Minus Query: 265 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 324 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 412 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 353 Query: 325 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 384 | |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 352 ttagacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 293 Query: 385 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 444 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 292 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 233 Query: 445 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 504 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 232 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 173 Query: 505 ggcccggtgctgaactcctcctcctc 530 ||||| ||| |||||||||||||||| Sbjct: 172 ggccccgtgttgaactcctcctcctc 147
>emb|CR650196.2|CNS0F0NU Tetraodon nigroviridis full-length cDNA Length = 593 Score = 107 bits (54), Expect = 5e-20 Identities = 213/266 (80%) Strand = Plus / Minus Query: 265 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 324 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 387 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 328 Query: 325 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 384 | |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 327 ttagacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 268 Query: 385 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 444 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 267 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 208 Query: 445 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 504 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 207 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 148 Query: 505 ggcccggtgctgaactcctcctcctc 530 ||||| ||| |||||||||||||||| Sbjct: 147 ggccccgtgttgaactcctcctcctc 122
>emb|CR646312.2|CNS0EXNY Tetraodon nigroviridis full-length cDNA Length = 432 Score = 107 bits (54), Expect = 5e-20 Identities = 213/266 (80%) Strand = Plus / Minus Query: 265 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 324 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 407 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 348 Query: 325 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 384 | |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 347 ttagacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 288 Query: 385 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 444 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 287 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 228 Query: 445 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 504 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 227 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 168 Query: 505 ggcccggtgctgaactcctcctcctc 530 ||||| ||| |||||||||||||||| Sbjct: 167 ggccccgtgttgaactcctcctcctc 142
>emb|CR636529.2|CNS0EQ47 Tetraodon nigroviridis full-length cDNA Length = 431 Score = 107 bits (54), Expect = 5e-20 Identities = 213/266 (80%) Strand = Plus / Minus Query: 265 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 324 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 406 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 347 Query: 325 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 384 | |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 346 ttagacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 287 Query: 385 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 444 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 286 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 227 Query: 445 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 504 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 226 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 167 Query: 505 ggcccggtgctgaactcctcctcctc 530 ||||| ||| |||||||||||||||| Sbjct: 166 ggccccgtgttgaactcctcctcctc 141
>emb|CR635163.2|CNS0EP29 Tetraodon nigroviridis full-length cDNA Length = 420 Score = 107 bits (54), Expect = 5e-20 Identities = 213/266 (80%) Strand = Plus / Minus Query: 265 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 324 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 395 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 336 Query: 325 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 384 | |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 335 ttagacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 276 Query: 385 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 444 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 275 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 216 Query: 445 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 504 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 215 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 156 Query: 505 ggcccggtgctgaactcctcctcctc 530 ||||| ||| |||||||||||||||| Sbjct: 155 ggccccgtgttgaactcctcctcctc 130
>emb|CR634479.2|CNS0EOJ9 Tetraodon nigroviridis full-length cDNA Length = 612 Score = 107 bits (54), Expect = 5e-20 Identities = 213/266 (80%) Strand = Plus / Minus Query: 265 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 324 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 406 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 347 Query: 325 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 384 | |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 346 ttagacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 287 Query: 385 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 444 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 286 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 227 Query: 445 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 504 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 226 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 167 Query: 505 ggcccggtgctgaactcctcctcctc 530 ||||| ||| |||||||||||||||| Sbjct: 166 ggccccgtgttgaactcctcctcctc 141
>emb|CR719572.2|CNS0GI62 Tetraodon nigroviridis full-length cDNA Length = 611 Score = 99.6 bits (50), Expect = 1e-17 Identities = 212/266 (79%) Strand = Plus / Minus Query: 265 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 324 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 402 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 343 Query: 325 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 384 | |||||||||||| || ||| ||||||| || || |||||||||||| | ||||| Sbjct: 342 ttagacttcttcttgcccttcccactctttgggacttctgtccacatctccttcacgttt 283 Query: 385 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 444 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 282 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 223 Query: 445 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 504 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 222 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 163 Query: 505 ggcccggtgctgaactcctcctcctc 530 ||||| ||| |||||||||||||||| Sbjct: 162 ggccccgtgttgaactcctcctcctc 137
>emb|CR708642.2|CNS0G9QM Tetraodon nigroviridis full-length cDNA Length = 630 Score = 99.6 bits (50), Expect = 1e-17 Identities = 212/266 (79%) Strand = Plus / Minus Query: 265 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 324 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||| ||| Sbjct: 416 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcattggc 357 Query: 325 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 384 || |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 356 ttggacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 297 Query: 385 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 444 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 296 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 237 Query: 445 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 504 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 236 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 177 Query: 505 ggcccggtgctgaactcctcctcctc 530 ||||| ||| ||||| |||||||||| Sbjct: 176 ggccccgtgttgaacccctcctcctc 151
>emb|CR698887.2|CNS0G27N Tetraodon nigroviridis full-length cDNA Length = 535 Score = 99.6 bits (50), Expect = 1e-17 Identities = 212/266 (79%) Strand = Plus / Minus Query: 265 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 324 |||||||| |||||||| || |||||||| ||| |||| | | ||||||||||||| Sbjct: 321 atgatgacggagtcgccccgcaggaacattttggagatgtagcgacccttgttcactggc 262 Query: 325 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 384 | |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 261 ttagacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 202 Query: 385 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 444 || || |||||||||||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 201 tccaggaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 142 Query: 445 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 504 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 141 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 82 Query: 505 ggcccggtgctgaactcctcctcctc 530 ||||| ||| |||||||||||||||| Sbjct: 81 ggccccgtgttgaactcctcctcctc 56
>emb|CR665557.2|CNS0FCIJ Tetraodon nigroviridis full-length cDNA Length = 612 Score = 99.6 bits (50), Expect = 1e-17 Identities = 212/266 (79%) Strand = Plus / Minus Query: 265 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 324 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 407 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 348 Query: 325 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 384 | |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 347 ttagacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 288 Query: 385 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 444 || || ||||||| |||||| | |||||| ||| | | | || || |||||||||||| Sbjct: 287 tccaggaccatgtggcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttg 228 Query: 445 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 504 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 227 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 168 Query: 505 ggcccggtgctgaactcctcctcctc 530 ||||| ||| |||||||||||||||| Sbjct: 167 ggccccgtgttgaactcctcctcctc 142
>emb|CR660721.2|CNS0F8S7 Tetraodon nigroviridis full-length cDNA Length = 612 Score = 99.6 bits (50), Expect = 1e-17 Identities = 212/266 (79%) Strand = Plus / Minus Query: 265 atgatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactgga 324 |||||||| |||||||| || |||||||| ||| |||| | | |||||||||||||| Sbjct: 406 atgatgacggagtcgccccgcaggaacattttggagatgtagcgatccttgttcactggc 347 Query: 325 agggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttc 384 | |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| Sbjct: 346 ttagacttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttt 287 Query: 385 tcgagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttg 444 || || |||||||||||||| | || ||| ||| | | | || || |||||||||||| Sbjct: 286 tccaggaccatgttgcaatgcctgtaaaaagctttgactcttccgagaagcttcttgttg 227 Query: 445 ttccggcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacagg 504 || |||||||| || || ||||| || ||||||||||| | |||||| |||||| Sbjct: 226 ttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacagg 167 Query: 505 ggcccggtgctgaactcctcctcctc 530 ||||| ||| |||||||||||||||| Sbjct: 166 ggccccgtgttgaactcctcctcctc 141
>gb|BC102877.1| Bos taurus similar to small nuclear ribonucleoprotein D2, mRNA (cDNA clone MGC:128077 IMAGE:7949710), complete cds Length = 596 Score = 99.6 bits (50), Expect = 1e-17 Identities = 224/282 (79%) Strand = Plus / Minus Query: 250 gggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgatgaacctg 309 |||||||| || || | |||||| ||||| ||||| |||||||||||| |||| | | | Sbjct: 424 gggttcctcaggaccacgatgacagagtccccgcgcaggaacatcttggagatgtagcgg 365 Query: 310 tccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtccac 369 |||||||| || || || |||||||||||| ||||| |||| || ||||| |||||| Sbjct: 364 tccttgttgacgggcttggacttcttcttgcccttgccgctcttggggacctccgtccac 305 Query: 370 atctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcatgcgacca 429 || ||| | |||||||| || ||||||||||| || | |||||| || ||| ||| || Sbjct: 304 atttccttcacgttctccagcaccatgttgcagtgcctgtcaaaggccttcacgcggccc 245 Query: 430 agtagcttcttgttgttccggcagttgataagtacctgggtattgttcttgacgctcatc 489 || |||||||||||||| ||||||||||| || || || || ||||| ||||| | | Sbjct: 244 aggagcttcttgttgttacggcagttgatgagcacttgagtgttgtttttgactgactgc 185 Query: 490 atgagcagggacaggggcccggtgctgaactcctcctcctcc 531 |||||| ||| || ||||| ||| | ||||||||||||||| Sbjct: 184 gtgagcacggagagtggccccgtgttaaactcctcctcctcc 143
>ref|NM_001034476.1| Bos taurus similar to small nuclear ribonucleoprotein D2 (MGC128077), mRNA Length = 596 Score = 99.6 bits (50), Expect = 1e-17 Identities = 224/282 (79%) Strand = Plus / Minus Query: 250 gggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgatgaacctg 309 |||||||| || || | |||||| ||||| ||||| |||||||||||| |||| | | | Sbjct: 424 gggttcctcaggaccacgatgacagagtccccgcgcaggaacatcttggagatgtagcgg 365 Query: 310 tccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtccac 369 |||||||| || || || |||||||||||| ||||| |||| || ||||| |||||| Sbjct: 364 tccttgttgacgggcttggacttcttcttgcccttgccgctcttggggacctccgtccac 305 Query: 370 atctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcatgcgacca 429 || ||| | |||||||| || ||||||||||| || | |||||| || ||| ||| || Sbjct: 304 atttccttcacgttctccagcaccatgttgcagtgcctgtcaaaggccttcacgcggccc 245 Query: 430 agtagcttcttgttgttccggcagttgataagtacctgggtattgttcttgacgctcatc 489 || |||||||||||||| ||||||||||| || || || || ||||| ||||| | | Sbjct: 244 aggagcttcttgttgttacggcagttgatgagcacttgagtgttgtttttgactgactgc 185 Query: 490 atgagcagggacaggggcccggtgctgaactcctcctcctcc 531 |||||| ||| || ||||| ||| | ||||||||||||||| Sbjct: 184 gtgagcacggagagtggccccgtgttaaactcctcctcctcc 143
>emb|CR715732.2|CNS0GF7K Tetraodon nigroviridis full-length cDNA Length = 394 Score = 97.6 bits (49), Expect = 5e-17 Identities = 178/221 (80%) Strand = Plus / Minus Query: 310 tccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtccac 369 |||||||||||||| | |||||||||||| || ||| |||||||||| || |||||| Sbjct: 367 tccttgttcactggcttagacttcttcttgcccttcccactctttggaacttctgtccac 308 Query: 370 atctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcatgcgacca 429 |||||| | ||||| || || |||||||||||||| | |||||| ||| | | | || Sbjct: 307 atctccttcacgttttccaggaccatgttgcaatgcctgtcaaaagctttgactcttccg 248 Query: 430 agtagcttcttgttgttccggcagttgataagtacctgggtattgttcttgacgctcatc 489 || |||||||||||||| |||||||| || || ||||| || ||||||||||| | Sbjct: 247 agaagcttcttgttgttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgt 188 Query: 490 atgagcagggacaggggcccggtgctgaactcctcctcctc 530 |||||| ||||||||||| ||| |||||||||||||||| Sbjct: 187 gtgagcaccgacaggggccccgtgttgaactcctcctcctc 147
>emb|CR706650.2|CNS0G87A Tetraodon nigroviridis full-length cDNA Length = 394 Score = 97.6 bits (49), Expect = 5e-17 Identities = 178/221 (80%) Strand = Plus / Minus Query: 310 tccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtccac 369 |||||||||||||| | |||||||||||| || ||| |||||||||| || |||||| Sbjct: 367 tccttgttcactggcttagacttcttcttgcccttcccactctttggaacttctgtccac 308 Query: 370 atctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcatgcgacca 429 |||||| | ||||| || || |||||||||||||| | |||||| ||| | | | || Sbjct: 307 atctccttcacgttttccaggaccatgttgcaatgcctgtcaaaagctttgactcttccg 248 Query: 430 agtagcttcttgttgttccggcagttgataagtacctgggtattgttcttgacgctcatc 489 || |||||||||||||| |||||||| || || ||||| || ||||||||||| | Sbjct: 247 agaagcttcttgttgttgcggcagttaatcaggacctgcgtgttgttcttgaccgactgt 188 Query: 490 atgagcagggacaggggcccggtgctgaactcctcctcctc 530 |||||| ||||||||||| ||| |||||||||||||||| Sbjct: 187 gtgagcaccgacaggggccccgtgttgaactcctcctcctc 147
>emb|CR636749.1|CNS0EQAB Tetraodon nigroviridis full-length cDNA Length = 381 Score = 97.6 bits (49), Expect = 5e-17 Identities = 163/201 (81%) Strand = Plus / Minus Query: 330 cttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcgag 389 |||||||||||| || ||| |||||||||| || |||||||||||| | ||||| || || Sbjct: 362 cttcttcttgcccttcccactctttggaacttctgtccacatctccttcacgttttccag 303 Query: 390 aaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgttccg 449 |||||||||||||| | |||||| ||| | | | || || |||||||||||||| || Sbjct: 302 gaccatgttgcaatgcctgtcaaaagctttgactcttccgagaagcttcttgttgttgcg 243 Query: 450 gcagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacaggggccc 509 |||||| || || ||||| || ||||||||||| | |||||| ||||||||||| Sbjct: 242 gcagttaatcaggacctgcgtgttgttcttgaccgactgtgtgagcaccgacaggggccc 183 Query: 510 ggtgctgaactcctcctcctc 530 ||| |||||||||||||||| Sbjct: 182 cgtgttgaactcctcctcctc 162
>gb|AC007191.1|AC007191 Homo sapiens chromosome 19, cosmid R34072, complete sequence Length = 43390 Score = 93.7 bits (47), Expect = 8e-16 Identities = 113/135 (83%) Strand = Plus / Plus Query: 267 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 326 |||||| ||||| ||||| |||||||||||| |||| | | ||| ||||| ||||| Sbjct: 7518 gatgactgagtccccgcgcaggaacatcttggagatgtagcggtctttgttgactggctt 7577 Query: 327 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 386 || |||||||||||| |||||| |||| || |||||||||||||||||| | |||||||| Sbjct: 7578 ggacttcttcttgcccttgccactcttgggtacctcagtccacatctccttcacgttctc 7637 Query: 387 gagaaccatgttgca 401 || ||||||||||| Sbjct: 7638 cagcaccatgttgca 7652 Score = 54.0 bits (27), Expect = 7e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 436 ttcttgttgttccggcagttgataagtacctgggtattgttcttgac 482 ||||| ||||| ||||||||||| || || ||||||||||||||||| Sbjct: 8346 ttcttattgttgcggcagttgatgagcacttgggtattgttcttgac 8392
>ref|NM_116149.2| Arabidopsis thaliana unknown protein AT3G62840 mRNA, complete cds Length = 1063 Score = 89.7 bits (45), Expect = 1e-14 Identities = 195/245 (79%) Strand = Plus / Minus Query: 247 ttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgatgaac 306 ||||||||||| || || || ||||| ||||| || || |||||||||||||||||||| Sbjct: 443 ttggggttcctgaggacgataatgactgagtctccacgcaggaacatcttgctgatgaat 384 Query: 307 ctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtc 366 | || |||| || ||||| || |||||||| ||||| || || || |||||||||||| Sbjct: 383 cgatctctgttaacaggaagagctttcttctttccttttccggttttcggaacctcagtc 324 Query: 367 cacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcatgcga 426 ||||| || || || || || |||||||||||||| || | |||||| || || | || Sbjct: 323 cacatttctctgacattttcaagaaccatgttgcagtgcctgtcaaaagccctaactcgg 264 Query: 427 ccaagtagcttcttgttgttccggcagttgataagtacctgggtattgttcttgacgctc 486 ||||| || ||| ||||||| ||||| ||||| | ||||| || || ||||| || ||| Sbjct: 263 ccaaggagtttcctgttgttacggcaattgatcaacacctgagtgttattcttaacactc 204 Query: 487 atcat 491 ||||| Sbjct: 203 atcat 199
>gb|AY087177.1| Arabidopsis thaliana clone 32457 mRNA, complete sequence Length = 646 Score = 89.7 bits (45), Expect = 1e-14 Identities = 195/245 (79%) Strand = Plus / Minus Query: 247 ttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgatgaac 306 ||||||||||| || || || ||||| ||||| || || |||||||||||||||||||| Sbjct: 446 ttggggttcctgaggacgataatgactgagtctccacgcaggaacatcttgctgatgaat 387 Query: 307 ctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtc 366 | || |||| || ||||| || |||||||| ||||| || || || |||||||||||| Sbjct: 386 cgatctctgttaacaggaagagctttcttctttccttttccggttttcggaacctcagtc 327 Query: 367 cacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcatgcga 426 ||||| || || || || || |||||||||||||| || | |||||| || || | || Sbjct: 326 cacatttctctgacattttcaagaaccatgttgcagtgcctgtcaaaagccctaactcgg 267 Query: 427 ccaagtagcttcttgttgttccggcagttgataagtacctgggtattgttcttgacgctc 486 ||||| || ||| ||||||| ||||| ||||| | ||||| || || ||||| || ||| Sbjct: 266 ccaaggagtttcctgttgttacggcaattgatcaacacctgagtgttattcttaacactc 207 Query: 487 atcat 491 ||||| Sbjct: 206 atcat 202
>ref|NM_026943.1| Mus musculus small nuclear ribonucleoprotein D2 (Snrpd2), mRNA Length = 508 Score = 87.7 bits (44), Expect = 5e-14 Identities = 173/216 (80%) Strand = Plus / Minus Query: 267 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 326 |||||||||||| ||||| |||||||||||| |||| | | ||||||||| || || Sbjct: 376 gatgaccgagtccccgcgcaggaacatcttggagatgtagcggtccttgttgacaggctt 317 Query: 327 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 386 || ||||||||||| ||||| |||| ||||||||||||||||||||| | || || || Sbjct: 316 ggatttcttcttgcccttgccgctcttgggaacctcagtccacatctccttcacattttc 257 Query: 387 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 446 || ||||||||||| || | |||||| || ||| || || || |||||||||||||| Sbjct: 256 cagcaccatgttgcagtgcctgtcaaaggccttcacccggcccagcagcttcttgttgtt 197 Query: 447 ccggcagttgataagtacctgggtattgttcttgac 482 || ||||| || || || || || ||||||||||| Sbjct: 196 gcgacagttaatgagcacttgcgtgttgttcttgac 161
>dbj|AK088105.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430004E09 product:small nuclear ribonucleoprotein D2, full insert sequence Length = 467 Score = 87.7 bits (44), Expect = 5e-14 Identities = 173/216 (80%) Strand = Plus / Minus Query: 267 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 326 |||||||||||| ||||| |||||||||||| |||| | | ||||||||| || || Sbjct: 355 gatgaccgagtccccgcgcaggaacatcttggagatgtagcggtccttgttgacaggctt 296 Query: 327 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 386 || ||||||||||| ||||| |||| ||||||||||||||||||||| | || || || Sbjct: 295 ggatttcttcttgcccttgccgctcttgggaacctcagtccacatctccttcacattttc 236 Query: 387 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 446 || ||||||||||| || | |||||| || ||| || || || |||||||||||||| Sbjct: 235 cagcaccatgttgcagtgcctgtcaaaggccttcacccggcccagcagcttcttgttgtt 176 Query: 447 ccggcagttgataagtacctgggtattgttcttgac 482 || ||||| || || || || || ||||||||||| Sbjct: 175 gcgacagttaatgagcacttgcgtgttgttcttgac 140
>dbj|AK045968.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230328B02 product:small nuclear ribonucleoprotein D2, full insert sequence Length = 462 Score = 87.7 bits (44), Expect = 5e-14 Identities = 173/216 (80%) Strand = Plus / Minus Query: 267 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 326 |||||||||||| ||||| |||||||||||| |||| | | ||||||||| || || Sbjct: 351 gatgaccgagtccccgcgcaggaacatcttggagatgtagcggtccttgttgacaggctt 292 Query: 327 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 386 || ||||||||||| ||||| |||| ||||||||||||||||||||| | || || || Sbjct: 291 ggatttcttcttgcccttgccgctcttgggaacctcagtccacatctccttcacattttc 232 Query: 387 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 446 || ||||||||||| || | |||||| || ||| || || || |||||||||||||| Sbjct: 231 cagcaccatgttgcagtgcctgtcaaaggccttcacccggcccagcagcttcttgttgtt 172 Query: 447 ccggcagttgataagtacctgggtattgttcttgac 482 || ||||| || || || || || ||||||||||| Sbjct: 171 gcgacagttaatgagcacttgcgtgttgttcttgac 136
>dbj|AK007389.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length enriched library, clone:1810009A06 product:small nuclear ribonucleoprotein D2, full insert sequence Length = 467 Score = 87.7 bits (44), Expect = 5e-14 Identities = 173/216 (80%) Strand = Plus / Minus Query: 267 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 326 |||||||||||| ||||| |||||||||||| |||| | | ||||||||| || || Sbjct: 355 gatgaccgagtccccgcgcaggaacatcttggagatgtagcggtccttgttgacaggctt 296 Query: 327 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 386 || ||||||||||| ||||| |||| ||||||||||||||||||||| | || || || Sbjct: 295 ggatttcttcttgcccttgccgctcttgggaacctcagtccacatctccttcacattttc 236 Query: 387 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 446 || ||||||||||| || | |||||| || ||| || || || |||||||||||||| Sbjct: 235 cagcaccatgttgcagtgcctgtcaaaggccttcacccggcccagcagcttcttgttgtt 176 Query: 447 ccggcagttgataagtacctgggtattgttcttgac 482 || ||||| || || || || || ||||||||||| Sbjct: 175 gcgacagttaatgagcacttgcgtgttgttcttgac 140
>gb|BC051208.1| Mus musculus small nuclear ribonucleoprotein D2, mRNA (cDNA clone MGC:62953 IMAGE:1510565), complete cds Length = 489 Score = 87.7 bits (44), Expect = 5e-14 Identities = 173/216 (80%) Strand = Plus / Minus Query: 267 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 326 |||||||||||| ||||| |||||||||||| |||| | | ||||||||| || || Sbjct: 355 gatgaccgagtccccgcgcaggaacatcttggagatgtagcggtccttgttgacaggctt 296 Query: 327 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 386 || ||||||||||| ||||| |||| ||||||||||||||||||||| | || || || Sbjct: 295 ggatttcttcttgcccttgccgctcttgggaacctcagtccacatctccttcacattttc 236 Query: 387 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 446 || ||||||||||| || | |||||| || ||| || || || |||||||||||||| Sbjct: 235 cagcaccatgttgcagtgcctgtcaaaggccttcacccggcccagcagcttcttgttgtt 176 Query: 447 ccggcagttgataagtacctgggtattgttcttgac 482 || ||||| || || || || || ||||||||||| Sbjct: 175 gcgacagttaatgagcacttgcgtgttgttcttgac 140
>gb|BC043014.1| Mus musculus small nuclear ribonucleoprotein D2, mRNA (cDNA clone MGC:57881 IMAGE:5683364), complete cds Length = 508 Score = 87.7 bits (44), Expect = 5e-14 Identities = 173/216 (80%) Strand = Plus / Minus Query: 267 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 326 |||||||||||| ||||| |||||||||||| |||| | | ||||||||| || || Sbjct: 376 gatgaccgagtccccgcgcaggaacatcttggagatgtagcggtccttgttgacaggctt 317 Query: 327 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 386 || ||||||||||| ||||| |||| ||||||||||||||||||||| | || || || Sbjct: 316 ggatttcttcttgcccttgccgctcttgggaacctcagtccacatctccttcacattttc 257 Query: 387 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 446 || ||||||||||| || | |||||| || ||| || || || |||||||||||||| Sbjct: 256 cagcaccatgttgcagtgcctgtcaaaggccttcacccggcccagcagcttcttgttgtt 197 Query: 447 ccggcagttgataagtacctgggtattgttcttgac 482 || ||||| || || || || || ||||||||||| Sbjct: 196 gcgacagttaatgagcacttgcgtgttgttcttgac 161
>gb|AY042797.1| Arabidopsis thaliana small nuclear ribonucleoprotein-like protein (F26K9.270) mRNA, complete cds Length = 541 Score = 85.7 bits (43), Expect = 2e-13 Identities = 127/155 (81%) Strand = Plus / Minus Query: 247 ttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgatgaac 306 ||||||||||| || || || ||||| ||||| || || |||||||||||||||||||| Sbjct: 425 ttggggttcctgaggacgataatgactgagtctccacgcaggaacatcttgctgatgaat 366 Query: 307 ctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtc 366 | || |||| || ||||| || |||||||| ||||| || || || |||||||||||| Sbjct: 365 cgatctctgttaacaggaagagctttcttctttccttttccggttttcggaacctcagtc 306 Query: 367 cacatctccctaacgttctcgagaaccatgttgca 401 ||||| || || || || || |||||||||||||| Sbjct: 305 cacatttctctgacattttcaagaaccatgttgca 271
>emb|CT963111.1| Medicago truncatula chromosome 5 clone mth2-43h1, COMPLETE SEQUENCE Length = 120939 Score = 81.8 bits (41), Expect = 3e-12 Identities = 98/117 (83%) Strand = Plus / Plus Query: 245 atttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgatga 304 ||||||||||||| |||||||||||||| || || || || || ||||| ||||| |||| Sbjct: 92833 atttggggttcctaagaacaatgatgacagaatctccacgaagaaacattttgcttatga 92892 Query: 305 acctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacct 361 | || || ||||| ||||| | ||||| ||||| ||||| |||||||||||||||| Sbjct: 92893 atctatctttgtttactggctgagcctttttctttcctttaccagtctttggaacct 92949
>ref|NM_141388.2| Drosophila melanogaster CG1249-RA (CG1249), mRNA Length = 765 Score = 79.8 bits (40), Expect = 1e-11 Identities = 85/100 (85%) Strand = Plus / Minus Query: 433 agcttcttgttgttccggcagttgataagtacctgggtattgttcttgacgctcatcatg 492 |||||||||||||| ||||||||||| || |||||||| |||||||| ||| | | || Sbjct: 275 agcttcttgttgttgcggcagttgatgagcacctgggtgttgttcttcacggactgcgtg 216 Query: 493 agcagggacaggggcccggtgctgaactcctcctcctcct 532 |||| |||||| || |||||| | |||||||||||||||| Sbjct: 215 agcacggacagcgggccggtgttaaactcctcctcctcct 176
>gb|AC016445.4| Drosophila melanogaster, chromosome 3R, region 83D-83F, BAC clone BACR19H03, complete sequence Length = 157141 Score = 79.8 bits (40), Expect = 1e-11 Identities = 85/100 (85%) Strand = Plus / Minus Query: 433 agcttcttgttgttccggcagttgataagtacctgggtattgttcttgacgctcatcatg 492 |||||||||||||| ||||||||||| || |||||||| |||||||| ||| | | || Sbjct: 44808 agcttcttgttgttgcggcagttgatgagcacctgggtgttgttcttcacggactgcgtg 44749 Query: 493 agcagggacaggggcccggtgctgaactcctcctcctcct 532 |||| |||||| || |||||| | |||||||||||||||| Sbjct: 44748 agcacggacagcgggccggtgttaaactcctcctcctcct 44709
>gb|AY069315.1| Drosophila melanogaster LD03002 full insert cDNA Length = 773 Score = 79.8 bits (40), Expect = 1e-11 Identities = 85/100 (85%) Strand = Plus / Minus Query: 433 agcttcttgttgttccggcagttgataagtacctgggtattgttcttgacgctcatcatg 492 |||||||||||||| ||||||||||| || |||||||| |||||||| ||| | | || Sbjct: 249 agcttcttgttgttgcggcagttgatgagcacctgggtgttgttcttcacggactgcgtg 190 Query: 493 agcagggacaggggcccggtgctgaactcctcctcctcct 532 |||| |||||| || |||||| | |||||||||||||||| Sbjct: 189 agcacggacagcgggccggtgttaaactcctcctcctcct 150
>gb|AE003675.4| Drosophila melanogaster chromosome 3R, section 9 of 118 of the complete sequence Length = 145958 Score = 79.8 bits (40), Expect = 1e-11 Identities = 85/100 (85%) Strand = Plus / Plus Query: 433 agcttcttgttgttccggcagttgataagtacctgggtattgttcttgacgctcatcatg 492 |||||||||||||| ||||||||||| || |||||||| |||||||| ||| | | || Sbjct: 11167 agcttcttgttgttgcggcagttgatgagcacctgggtgttgttcttcacggactgcgtg 11226 Query: 493 agcagggacaggggcccggtgctgaactcctcctcctcct 532 |||| |||||| || |||||| | |||||||||||||||| Sbjct: 11227 agcacggacagcgggccggtgttaaactcctcctcctcct 11266
>gb|AC131120.4| Mus musculus BAC clone RP24-547N4 from 10, complete sequence Length = 228657 Score = 79.8 bits (40), Expect = 1e-11 Identities = 172/216 (79%) Strand = Plus / Minus Query: 267 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 326 ||||||| |||| ||||| |||||||||||| |||| | | ||||||||| || || Sbjct: 132117 gatgaccaagtccccgcgcaggaacatcttggagatgtagcggtccttgttgacaggctt 132058 Query: 327 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 386 || ||||||||||| ||||| |||| ||||||||||||||||||||| | || || || Sbjct: 132057 ggatttcttcttgcccttgccgctcttgggaacctcagtccacatctccttcacattttc 131998 Query: 387 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 446 || ||||||||||| || | |||||| || ||| || || || |||||||||||||| Sbjct: 131997 cagcaccatgttgcagtgcctgtcaaaggccttcacccggcccagcagcttcttgttgtt 131938 Query: 447 ccggcagttgataagtacctgggtattgttcttgac 482 || ||||| || || || || || ||||||||||| Sbjct: 131937 gcgacagttaatgagcacttgtgtgttgttcttgac 131902
>gb|AC145199.3| Mus musculus BAC clone RP23-173N12 from chromosome 7, complete sequence Length = 220892 Score = 77.8 bits (39), Expect = 5e-11 Identities = 111/135 (82%) Strand = Plus / Plus Query: 267 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 326 |||||||||||| ||||| |||||||||||| |||| | | ||||||||| || || Sbjct: 57248 gatgaccgagtccccgcgcaggaacatcttggagatgtagcggtccttgttgacaggctt 57307 Query: 327 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 386 || ||||||||||| ||||| |||| ||||||||||||||||||||| | || || || Sbjct: 57308 ggatttcttcttgcccttgccgctcttgggaacctcagtccacatctccttcacattttc 57367 Query: 387 gagaaccatgttgca 401 || ||||||||||| Sbjct: 57368 cagcaccatgttgca 57382
>emb|BX936185.1| Gallus gallus finished cDNA, clone ChEST146i23 Length = 446 Score = 71.9 bits (36), Expect = 3e-09 Identities = 159/200 (79%) Strand = Plus / Minus Query: 331 ttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcgaga 390 ||||| ||||||||||| | || || ||||| |||||||||||| | |||||||| || Sbjct: 334 ttctttttgcctttgccgcttttcgggacctccgtccacatctccttcacgttctccagg 275 Query: 391 accatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgttccgg 450 ||||| ||||| || | ||| || || | | ||| || || |||||||||||||| ||| Sbjct: 274 accatattgcagtgcctgtcgaaggccttgacgcggcccagcagcttcttgttgttgcgg 215 Query: 451 cagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacaggggcccg 510 |||||||| || ||||| || |||||||| || | | | |||| ||||| |||||| Sbjct: 214 cagttgatcagcacctgcgtgttgttcttcaccgactgcgtcagcaccgacagcggcccg 155 Query: 511 gtgctgaactcctcctcctc 530 ||| |||||||||||||||| Sbjct: 154 gtgttgaactcctcctcctc 135
>emb|BX933865.1| Gallus gallus finished cDNA, clone ChEST916l7 Length = 427 Score = 71.9 bits (36), Expect = 3e-09 Identities = 159/200 (79%) Strand = Plus / Minus Query: 331 ttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcgaga 390 ||||| ||||||||||| | || || ||||| |||||||||||| | |||||||| || Sbjct: 315 ttctttttgcctttgccgcttttcgggacctccgtccacatctccttcacgttctccagg 256 Query: 391 accatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgttccgg 450 ||||| ||||| || | ||| || || | | ||| || || |||||||||||||| ||| Sbjct: 255 accatattgcagtgcctgtcgaaggccttgacgcggcccagcagcttcttgttgttgcgg 196 Query: 451 cagttgataagtacctgggtattgttcttgacgctcatcatgagcagggacaggggcccg 510 |||||||| || ||||| || |||||||| || | | | |||| ||||| |||||| Sbjct: 195 cagttgatcagcacctgcgtgttgttcttcaccgactgcgtcagcaccgacagcggcccg 136 Query: 511 gtgctgaactcctcctcctc 530 ||| |||||||||||||||| Sbjct: 135 gtgttgaactcctcctcctc 116
>ref|XM_214847.2| PREDICTED: Rattus norvegicus small nuclear ribonucleoprotein D2 (predicted) (Snrpd2_predicted), mRNA Length = 537 Score = 71.9 bits (36), Expect = 3e-09 Identities = 150/188 (79%) Strand = Plus / Minus Query: 268 atgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaagg 327 ||||| ||||| ||||| |||||||||||| |||| | | ||||||||| || || | Sbjct: 394 atgactgagtccccgcgcaggaacatcttggagatgtagcggtccttgttgacaggcttg 335 Query: 328 gccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcg 387 | |||||||||||| ||||| |||| || |||||||||||||||||| | || || || Sbjct: 334 gacttcttcttgcccttgccgctcttggggacctcagtccacatctccttcacattttcc 275 Query: 388 agaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgttc 447 || ||||||||||| || | |||||| || ||| || || || |||||||||||||| Sbjct: 274 agcaccatgttgcagtgcctgtcaaaggccttcacccggcccaggagcttcttgttgttt 215 Query: 448 cggcagtt 455 || ||||| Sbjct: 214 cgacagtt 207
>ref|NM_001017582.1| Danio rerio zgc:110732 (zgc:110732), mRNA Length = 756 Score = 69.9 bits (35), Expect = 1e-08 Identities = 179/227 (78%) Strand = Plus / Minus Query: 250 gggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgatgaacctg 309 |||||||| || || | ||||||||||||||| | |||||||||||| |||| | | Sbjct: 426 gggttcctcagcaccacgatgaccgagtcgcctctcaggaacatcttggagatgtagcga 367 Query: 310 tccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtccac 369 || ||||||||||| | |||||||||||||||||| |||| || ||||| |||||| Sbjct: 366 tctttgttcactggctttgacttcttcttgcctttgccgctcttgggcacctctgtccac 307 Query: 370 atctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcatgcgacca 429 || || | || ||||| |||||||| || ||||| | ||| |||||| | | | || Sbjct: 306 atttctttcacattctccagaaccatattacaatgcctgtcgaatgctttgactctgccc 247 Query: 430 agtagcttcttgttgttccggcagttgataagtacctgggtattgtt 476 || |||||||||||||| ||||||||||| || ||||| || ||||| Sbjct: 246 agcagcttcttgttgttgcggcagttgatgaggacctgtgtgttgtt 200
>gb|AC005309.3| Arabidopsis thaliana chromosome 2 clone F17A22 map CIC06C03, complete sequence Length = 106355 Score = 69.9 bits (35), Expect = 1e-08 Identities = 98/119 (82%) Strand = Plus / Minus Query: 243 tcatttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgat 302 |||||| || ||||| || || || ||||||||||| || || || ||||||||||| || Sbjct: 5867 tcattttggattcctgaggacgataatgaccgagtctccacgtagaaacatcttgcttat 5808 Query: 303 gaacctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacct 361 ||||| || ||||||| ||||| || |||||||||||||| ||||| || ||||||| Sbjct: 5807 gaaccgatctctgttcaccggaagtgctttcttcttgcctttcccagttttcggaacct 5749 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 358 acctcagtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgct 417 ||||||||||||||||| || || || || |||||||||||||| || | |||||| || Sbjct: 5670 acctcagtccacatctctctgacattttcaagaaccatgttgcagtgtctgtcaaacgcc 5611 Query: 418 ctcatgcgaccaagtagcttcttgttgttccggcagttgat 458 |||| || ||||| || ||| ||||||||||||| ||||| Sbjct: 5610 ctcactcgcccaagaagtttcctgttgttccggcaattgat 5570 Score = 42.1 bits (21), Expect = 2.5 Identities = 57/69 (82%) Strand = Plus / Minus Query: 462 tacctgggtattgttcttgacgctcatcatgagcagggacaggggcccggtgctgaactc 521 |||||| || || ||||||||||||||||| || | || || ||||||||| |||| || Sbjct: 5376 tacctgagtgttattcttgacgctcatcataagaacagagagtggcccggtgttgaattc 5317 Query: 522 ctcctcctc 530 ||| ||||| Sbjct: 5316 ctcttcctc 5308
>gb|AC002535.3| Arabidopsis thaliana chromosome 2 clone T30B22 map CIC06C03, complete sequence Length = 98937 Score = 69.9 bits (35), Expect = 1e-08 Identities = 98/119 (82%) Strand = Plus / Plus Query: 243 tcatttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgat 302 |||||| || ||||| || || || ||||||||||| || || || ||||||||||| || Sbjct: 10209 tcattttggattcctgaggacgataatgaccgagtctccacgtagaaacatcttgcttat 10268 Query: 303 gaacctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacct 361 ||||| || ||||||| ||||| || |||||||||||||| ||||| || ||||||| Sbjct: 10269 gaaccgatctctgttcaccggaagtgctttcttcttgcctttcccagttttcggaacct 10327 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 358 acctcagtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgct 417 ||||||||||||||||| || || || || |||||||||||||| || | |||||| || Sbjct: 10406 acctcagtccacatctctctgacattttcaagaaccatgttgcagtgtctgtcaaacgcc 10465 Query: 418 ctcatgcgaccaagtagcttcttgttgttccggcagttgat 458 |||| || ||||| || ||| ||||||||||||| ||||| Sbjct: 10466 ctcactcgcccaagaagtttcctgttgttccggcaattgat 10506 Score = 42.1 bits (21), Expect = 2.5 Identities = 57/69 (82%) Strand = Plus / Plus Query: 462 tacctgggtattgttcttgacgctcatcatgagcagggacaggggcccggtgctgaactc 521 |||||| || || ||||||||||||||||| || | || || ||||||||| |||| || Sbjct: 10700 tacctgagtgttattcttgacgctcatcataagaacagagagtggcccggtgttgaattc 10759 Query: 522 ctcctcctc 530 ||| ||||| Sbjct: 10760 ctcttcctc 10768
>ref|XM_694891.1| PREDICTED: Danio rerio similar to small nuclear ribonucleoprotein D2 (LOC571315), mRNA Length = 745 Score = 69.9 bits (35), Expect = 1e-08 Identities = 179/227 (78%) Strand = Plus / Minus Query: 250 gggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgatgaacctg 309 |||||||| || || | ||||||||||||||| | |||||||||||| |||| | | Sbjct: 438 gggttcctcagcaccacgatgaccgagtcgcctctcaggaacatcttggagatgtagcga 379 Query: 310 tccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtccac 369 || ||||||||||| | |||||||||||||||||| |||| || ||||| |||||| Sbjct: 378 tctttgttcactggctttgacttcttcttgcctttgccgctcttgggcacctctgtccac 319 Query: 370 atctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcatgcgacca 429 || || | || ||||| |||||||| || ||||| | ||| |||||| | | | || Sbjct: 318 atttctttcacattctccagaaccatattacaatgcctgtcgaatgctttgactctgccc 259 Query: 430 agtagcttcttgttgttccggcagttgataagtacctgggtattgtt 476 || |||||||||||||| ||||||||||| || ||||| || ||||| Sbjct: 258 agcagcttcttgttgttgcggcagttgatgaggacctgtgtgttgtt 212
>ref|XM_694863.1| PREDICTED: Danio rerio similar to small nuclear ribonucleoprotein D2 (LOC571288), mRNA Length = 745 Score = 69.9 bits (35), Expect = 1e-08 Identities = 179/227 (78%) Strand = Plus / Minus Query: 250 gggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgatgaacctg 309 |||||||| || || | ||||||||||||||| | |||||||||||| |||| | | Sbjct: 438 gggttcctcagcaccacgatgaccgagtcgcctctcaggaacatcttggagatgtagcga 379 Query: 310 tccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtccac 369 || ||||||||||| | |||||||||||||||||| |||| || ||||| |||||| Sbjct: 378 tctttgttcactggctttgacttcttcttgcctttgccgctcttgggcacctctgtccac 319 Query: 370 atctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcatgcgacca 429 || || | || ||||| |||||||| || ||||| | ||| |||||| | | | || Sbjct: 318 atttctttcacattctccagaaccatattacaatgcctgtcgaatgctttgactctgccc 259 Query: 430 agtagcttcttgttgttccggcagttgataagtacctgggtattgtt 476 || |||||||||||||| ||||||||||| || ||||| || ||||| Sbjct: 258 agcagcttcttgttgttgcggcagttgatgaggacctgtgtgttgtt 212
>gb|BC093003.1| Danio rerio zgc:110732, mRNA (cDNA clone MGC:110732 IMAGE:7177415), complete cds Length = 756 Score = 69.9 bits (35), Expect = 1e-08 Identities = 179/227 (78%) Strand = Plus / Minus Query: 250 gggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgatgaacctg 309 |||||||| || || | ||||||||||||||| | |||||||||||| |||| | | Sbjct: 426 gggttcctcagcaccacgatgaccgagtcgcctctcaggaacatcttggagatgtagcga 367 Query: 310 tccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtccac 369 || ||||||||||| | |||||||||||||||||| |||| || ||||| |||||| Sbjct: 366 tctttgttcactggctttgacttcttcttgcctttgccgctcttgggcacctctgtccac 307 Query: 370 atctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcatgcgacca 429 || || | || ||||| |||||||| || ||||| | ||| |||||| | | | || Sbjct: 306 atttctttcacattctccagaaccatattacaatgcctgtcgaatgctttgactctgccc 247 Query: 430 agtagcttcttgttgttccggcagttgataagtacctgggtattgtt 476 || |||||||||||||| ||||||||||| || ||||| || ||||| Sbjct: 246 agcagcttcttgttgttgcggcagttgatgaggacctgtgtgttgtt 200
>ref|NM_073603.2| Caenorhabditis elegans Small Nuclear Ribonucleoprotein family member (snr-4) (snr-4) mRNA, complete cds Length = 565 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 328 gccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcg 387 ||||||||||| || || ||||||||||| || ||||||||||| ||| | || || ||| Sbjct: 298 gccttcttctttccctttccagtctttggcacttcagtccacatttccttcacattttcg 239 Query: 388 agaaccatgttgcaatgacggtcaaa 413 || |||||||||||||| | |||||| Sbjct: 238 aggaccatgttgcaatgtctgtcaaa 213
>emb|Z78012.1|CEC52E4 Caenorhabditis elegans Cosmid C52E4, complete sequence Length = 33089 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 328 gccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcg 387 ||||||||||| || || ||||||||||| || ||||||||||| ||| | || || ||| Sbjct: 14787 gccttcttctttccctttccagtctttggcacttcagtccacatttccttcacattttcg 14846 Query: 388 agaaccatgttgcaatg 404 || |||||||||||||| Sbjct: 14847 aggaccatgttgcaatg 14863
>gb|AY949614.1| Pongo pygmaeus orthologous to Homo sapiens retroposed sequence ENSG00000148667 genomic sequence Length = 357 Score = 63.9 bits (32), Expect = 7e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 330 cttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcgag 389 |||||||||||| ||||| |||| || |||||||||||||||||| | || ||||| || Sbjct: 258 cttcttcttgcccttgccgctcttaggtacctcagtccacatctccttcacattctccag 199 Query: 390 aaccatgttgca 401 ||||||||||| Sbjct: 198 caccatgttgca 187
>gb|AC128649.5| Homo sapiens 12 BAC RP11-728G4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167071 Score = 60.0 bits (30), Expect = 1e-05 Identities = 42/46 (91%) Strand = Plus / Minus Query: 330 cttcttcttgcctttgccagtctttggaacctcagtccacatctcc 375 |||||||||||| |||||| |||| || |||||||||||||||||| Sbjct: 80984 cttcttcttgccattgccactcttgggtacctcagtccacatctcc 80939
>gb|AC128657.2| Homo sapiens 12 BAC RP11-1079J22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 60001 Score = 60.0 bits (30), Expect = 1e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 330 cttcttcttgcctttgccagtctttggaacctcagtccacatctcc 375 |||||||||||| |||||| |||| || |||||||||||||||||| Sbjct: 28380 cttcttcttgccattgccactcttgggtacctcagtccacatctcc 28425
>ref|XM_940474.1| PREDICTED: Homo sapiens similar to small nuclear ribonucleoprotein D2 (LOC390349), mRNA Length = 293 Score = 60.0 bits (30), Expect = 1e-05 Identities = 42/46 (91%) Strand = Plus / Minus Query: 330 cttcttcttgcctttgccagtctttggaacctcagtccacatctcc 375 |||||||||||| |||||| |||| || |||||||||||||||||| Sbjct: 102 cttcttcttgccattgccactcttgggtacctcagtccacatctcc 57
>ref|XM_372472.2| PREDICTED: Homo sapiens similar to small nuclear ribonucleoprotein D2 (LOC390349), mRNA Length = 293 Score = 60.0 bits (30), Expect = 1e-05 Identities = 42/46 (91%) Strand = Plus / Minus Query: 330 cttcttcttgcctttgccagtctttggaacctcagtccacatctcc 375 |||||||||||| |||||| |||| || |||||||||||||||||| Sbjct: 102 cttcttcttgccattgccactcttgggtacctcagtccacatctcc 57
>gb|AC084532.1|CBRG22L08 Caenorhabditis briggsae cosmid G22L08, complete sequence Length = 34558 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 328 gccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcg 387 ||||||||||| || || |||||||| || || || ||||||||||| | ||||||||| Sbjct: 12273 gccttcttctttccctttccagtcttcgggacttctgtccacatctctttgacgttctcg 12332 Query: 388 agaaccatgttgca 401 || ||||||||||| Sbjct: 12333 agcaccatgttgca 12346
>gb|AC155339.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH015H17, complete sequence Length = 110885 Score = 60.0 bits (30), Expect = 1e-05 Identities = 135/170 (79%) Strand = Plus / Plus Query: 358 acctcagtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgct 417 |||||||||||||| || || || || || |||||||||||||| || | ||| || || Sbjct: 20762 acctcagtccacatttctctgacattttcaagaaccatgttgcagtgcctgtcgaaagcc 20821 Query: 418 ctcatgcgaccaagtagcttcttgttgttccggcagttgataagtacctgggtattgttc 477 || | || ||||| || ||| ||||||| ||||||||||| | ||||| || |||||| Sbjct: 20822 ctaacacggccaaggagtttcctgttgttgcggcagttgatcaagacctgagtgttgttc 20881 Query: 478 ttgacgctcatcatgagcagggacaggggcccggtgctgaactcctcctc 527 || || |||||||| || | || ||||| || ||| ||||||||||||| Sbjct: 20882 ttaacactcatcatcagaacagaaaggggtcccgtgttgaactcctcctc 20931 Score = 56.0 bits (28), Expect = 2e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 247 ttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgatgaac 306 ||||| ||||| || || |||||||| ||||| || ||||| ||||||||||||||||| Sbjct: 20553 ttgggattcctaaggacgatgatgacggagtcaccacggagaaacatcttgctgatgaag 20612 Query: 307 ctgtccttgttcactggaagggccttcttcttgcctttgccagt 350 | || |||| || ||||| || |||||||| ||||| ||||| Sbjct: 20613 cgatctctgttgacgggaagagctttcttctttccttttccagt 20656
>gb|AC155335.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH001H24, complete sequence Length = 118144 Score = 60.0 bits (30), Expect = 1e-05 Identities = 135/170 (79%) Strand = Plus / Plus Query: 358 acctcagtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgct 417 |||||||||||||| || || || || || |||||||||||||| || | ||| || || Sbjct: 106940 acctcagtccacatttctctgacattttcaagaaccatgttgcagtgcctgtcgaaagcc 106999 Query: 418 ctcatgcgaccaagtagcttcttgttgttccggcagttgataagtacctgggtattgttc 477 || | || ||||| || ||| ||||||| ||||||||||| | ||||| || |||||| Sbjct: 107000 ctaacacggccaaggagtttcctgttgttgcggcagttgatcaagacctgagtgttgttc 107059 Query: 478 ttgacgctcatcatgagcagggacaggggcccggtgctgaactcctcctc 527 || || |||||||| || | || ||||| || ||| ||||||||||||| Sbjct: 107060 ttaacactcatcatcagaacagaaaggggtcccgtgttgaactcctcctc 107109 Score = 56.0 bits (28), Expect = 2e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 247 ttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgatgaac 306 ||||| ||||| || || |||||||| ||||| || ||||| ||||||||||||||||| Sbjct: 106731 ttgggattcctaaggacgatgatgacggagtcaccacggagaaacatcttgctgatgaag 106790 Query: 307 ctgtccttgttcactggaagggccttcttcttgcctttgccagt 350 | || |||| || ||||| || |||||||| ||||| ||||| Sbjct: 106791 cgatctctgttgacgggaagagctttcttctttccttttccagt 106834
>gb|AC154808.2| Mus musculus BAC clone RP24-512K19 from chromosome 13, complete sequence Length = 187080 Score = 58.0 bits (29), Expect = 4e-05 Identities = 122/153 (79%) Strand = Plus / Plus Query: 330 cttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcgag 389 |||||||||||| ||||| |||| || |||||||||||||||||| | || || || || Sbjct: 81242 cttcttcttgcccttgccgctcttggggacctcagtccacatctccttcacattttccag 81301 Query: 390 aaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgttccg 449 ||||||||||| || | |||||| || ||| || || || |||||||| ||||| || Sbjct: 81302 caccatgttgcagtgcctgtcaaaggccttcacccggcccagcagcttcttcttgttgcg 81361 Query: 450 gcagttgataagtacctgggtattgttcttgac 482 ||||| || || || || || ||||||||||| Sbjct: 81362 acagttaatgagcacttgtgtgttgttcttgac 81394
>ref|XM_521555.1| PREDICTED: Pan troglodytes similar to small nuclear ribonucleoprotein polypeptide D2; snRNP core protein D2; small nuclear ribonucleoprotein D2 polypeptide (16.5kD) (LOC466153), mRNA Length = 354 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 333 cttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcgagaac 392 ||||||||| ||||| |||| || |||||||||||||||||| | | |||||| || || Sbjct: 255 cttcttgcccttgccgctcttgggtacctcagtccacatctccttcatgttctccagcac 196 Query: 393 catgttgca 401 ||||||||| Sbjct: 195 catgttgca 187
>ref|XM_982574.1| PREDICTED: Mus musculus similar to small nuclear ribonucleoprotein D2 (LOC432760), mRNA Length = 475 Score = 58.0 bits (29), Expect = 4e-05 Identities = 122/153 (79%) Strand = Plus / Minus Query: 330 cttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcgag 389 |||||||||||| ||||| |||| || |||||||||||||||||| | || || || || Sbjct: 290 cttcttcttgcccttgccgctcttggggacctcagtccacatctccttcacattttccag 231 Query: 390 aaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgttccg 449 ||||||||||| || | |||||| || ||| || || || |||||||| ||||| || Sbjct: 230 caccatgttgcagtgcctgtcaaaggccttcacccggcccagcagcttcttcttgttgcg 171 Query: 450 gcagttgataagtacctgggtattgttcttgac 482 ||||| || || || || || ||||||||||| Sbjct: 170 acagttaatgagcacttgtgtgttgttcttgac 138
>ref|XM_484260.3| PREDICTED: Mus musculus similar to small nuclear ribonucleoprotein D2 (LOC432760), mRNA Length = 475 Score = 58.0 bits (29), Expect = 4e-05 Identities = 122/153 (79%) Strand = Plus / Minus Query: 330 cttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcgag 389 |||||||||||| ||||| |||| || |||||||||||||||||| | || || || || Sbjct: 290 cttcttcttgcccttgccgctcttggggacctcagtccacatctccttcacattttccag 231 Query: 390 aaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgttccg 449 ||||||||||| || | |||||| || ||| || || || |||||||| ||||| || Sbjct: 230 caccatgttgcagtgcctgtcaaaggccttcacccggcccagcagcttcttcttgttgcg 171 Query: 450 gcagttgataagtacctgggtattgttcttgac 482 ||||| || || || || || ||||||||||| Sbjct: 170 acagttaatgagcacttgtgtgttgttcttgac 138
>ref|XM_915862.2| PREDICTED: Mus musculus similar to small nuclear ribonucleoprotein D2 (LOC432760), mRNA Length = 475 Score = 58.0 bits (29), Expect = 4e-05 Identities = 122/153 (79%) Strand = Plus / Minus Query: 330 cttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcgag 389 |||||||||||| ||||| |||| || |||||||||||||||||| | || || || || Sbjct: 290 cttcttcttgcccttgccgctcttggggacctcagtccacatctccttcacattttccag 231 Query: 390 aaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgttccg 449 ||||||||||| || | |||||| || ||| || || || |||||||| ||||| || Sbjct: 230 caccatgttgcagtgcctgtcaaaggccttcacccggcccagcagcttcttcttgttgcg 171 Query: 450 gcagttgataagtacctgggtattgttcttgac 482 ||||| || || || || || ||||||||||| Sbjct: 170 acagttaatgagcacttgtgtgttgttcttgac 138
>ref|XM_387194.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07018.1) partial mRNA Length = 468 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 364 gtccacatctccctaacgttctcgagaaccatgttgcaatg 404 |||||||| ||| | |||||||||||||||||||||||||| Sbjct: 356 gtccacatttccttgacgttctcgagaaccatgttgcaatg 316 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 289 aacatcttgctgatgaacctgtccttgttcactgg 323 ||||||||||||||||||| |||||||| ||||| Sbjct: 428 aacatcttgctgatgaaccgatccttgttgactgg 394
>emb|AL390206.14| Human DNA sequence from clone RP11-478K7 on chromosome 10 Contains a small nuclear ribonucleoprotein D2 polypeptide 16.5kDa (SNRPD2) pseudogene and a novel gene (FLJ35900), complete sequence Length = 113039 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 333 cttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcgagaac 392 ||||||||| ||||| |||| || |||||||||||| ||||| | |||||||| || || Sbjct: 82759 cttcttgcccttgccgctcttgggtacctcagtccacgtctccttcacgttctccagcac 82700 Query: 393 catgttgca 401 ||||||||| Sbjct: 82699 catgttgca 82691
>emb|BX027975.1|CNS08TQZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA41DD12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 505 Score = 58.0 bits (29), Expect = 4e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 364 gtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcatg 423 |||||||| ||| | ||||| || || ||||||||||| || || ||||| ||| ||| | Sbjct: 191 gtccacatttccttcacgttttccagcaccatgttgcagtggcgatcaaacgctttcacg 250 Query: 424 cgaccaagtagcttcttgttgttccggcagttgataagtacctgggtattgtt 476 || || || ||||| |||||||| |||||||| || |||||||| || ||||| Sbjct: 251 cgccccagcagctttttgttgttgcggcagtttatcagtacctgcgtgttgtt 303
>emb|BX027974.1|CNS08TQY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA41DD12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 523 Score = 58.0 bits (29), Expect = 4e-05 Identities = 92/113 (81%) Strand = Plus / Minus Query: 364 gtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcatg 423 |||||||| ||| | ||||| || || ||||||||||| || || ||||| ||| ||| | Sbjct: 292 gtccacatttccttcacgttttccagcaccatgttgcagtggcgatcaaacgctttcacg 233 Query: 424 cgaccaagtagcttcttgttgttccggcagttgataagtacctgggtattgtt 476 || || || ||||| |||||||| |||||||| || |||||||| || ||||| Sbjct: 232 cgccccagcagctttttgttgttgcggcagtttatcagtacctgcgtgttgtt 180
>ref|XM_937349.1| PREDICTED: Homo sapiens similar to small nuclear ribonucleoprotein D2 (LOC648295), mRNA Length = 356 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 333 cttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcgagaac 392 ||||||||| ||||| |||| || |||||||||||| ||||| | |||||||| || || Sbjct: 257 cttcttgcccttgccgctcttgggtacctcagtccacgtctccttcacgttctccagcac 198 Query: 393 catgttgca 401 ||||||||| Sbjct: 197 catgttgca 189
>ref|XM_061427.2| PREDICTED: Homo sapiens similar to small nuclear ribonucleoprotein D2 (LOC119358), mRNA Length = 356 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 333 cttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcgagaac 392 ||||||||| ||||| |||| || |||||||||||| ||||| | |||||||| || || Sbjct: 257 cttcttgcccttgccgctcttgggtacctcagtccacgtctccttcacgttctccagcac 198 Query: 393 catgttgca 401 ||||||||| Sbjct: 197 catgttgca 189
>ref|XM_318388.2| Anopheles gambiae str. PEST ENSANGP00000002741 (ENSANGG00000002272), partial mRNA Length = 417 Score = 58.0 bits (29), Expect = 4e-05 Identities = 92/113 (81%) Strand = Plus / Minus Query: 364 gtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgctctcatg 423 |||||||| ||| | ||||| || || ||||||||||| || || ||||| ||| ||| | Sbjct: 218 gtccacatttccttcacgttttccagcaccatgttgcagtggcgatcaaacgctttcacg 159 Query: 424 cgaccaagtagcttcttgttgttccggcagttgataagtacctgggtattgtt 476 || || || ||||| |||||||| |||||||| || |||||||| || ||||| Sbjct: 158 cgccccagcagctttttgttgttgcggcagtttatcagtacctgcgtgttgtt 106
>gb|AC114675.9| Mus musculus chromosome 3, clone RP24-210G2, complete sequence Length = 153302 Score = 56.0 bits (28), Expect = 2e-04 Identities = 169/216 (78%) Strand = Plus / Plus Query: 267 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 326 |||||||||||| || || ||||| |||||| |||| | | ||||||||| || || Sbjct: 102422 gatgaccgagtccccacgcaggaatatcttggagatgtagcagtccttgttgacaggctt 102481 Query: 327 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 386 || |||||||||||| |||| |||| || |||||||||||||||||| | || || || Sbjct: 102482 ggacttcttcttgcccttgctgctcttggggacctcagtccacatctccttcacattttc 102541 Query: 387 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 446 || ||||||||||| || | |||||| || ||| || || || |||||||| ||||| Sbjct: 102542 cagcaccatgttgcagtgcctgtcaaaggccttcacccggcccagcagcttcttcttgtt 102601 Query: 447 ccggcagttgataagtacctgggtattgttcttgac 482 || ||||| || || || || || ||||||||||| Sbjct: 102602 gcgacagttaatgagcacttgcgtgttgttcttgac 102637
>ref|XM_905150.2| PREDICTED: Mus musculus similar to small nuclear ribonucleoprotein D2 (LOC631370), mRNA Length = 476 Score = 56.0 bits (28), Expect = 2e-04 Identities = 169/216 (78%) Strand = Plus / Minus Query: 267 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 326 |||||||||||| || || ||||| |||||| |||| | | ||||||||| || || Sbjct: 354 gatgaccgagtccccacgcaggaatatcttggagatgtagcagtccttgttgacaggctt 295 Query: 327 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 386 || |||||||||||| |||| |||| || |||||||||||||||||| | || || || Sbjct: 294 ggacttcttcttgcccttgctgctcttggggacctcagtccacatctccttcacattttc 235 Query: 387 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 446 || ||||||||||| || | |||||| || ||| || || || |||||||| ||||| Sbjct: 234 cagcaccatgttgcagtgcctgtcaaaggccttcacccggcccagcagcttcttcttgtt 175 Query: 447 ccggcagttgataagtacctgggtattgttcttgac 482 || ||||| || || || || || ||||||||||| Sbjct: 174 gcgacagttaatgagcacttgcgtgttgttcttgac 139
>ref|XM_619909.3| PREDICTED: Mus musculus similar to small nuclear ribonucleoprotein D2 (LOC545531), mRNA Length = 476 Score = 56.0 bits (28), Expect = 2e-04 Identities = 169/216 (78%) Strand = Plus / Minus Query: 267 gatgaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgttcactggaag 326 |||||||||||| || || ||||| |||||| |||| | | ||||||||| || || Sbjct: 354 gatgaccgagtccccacgcaggaatatcttggagatgtagcagtccttgttgacaggctt 295 Query: 327 ggccttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctc 386 || |||||||||||| |||| |||| || |||||||||||||||||| | || || || Sbjct: 294 ggacttcttcttgcccttgctgctcttggggacctcagtccacatctccttcacattttc 235 Query: 387 gagaaccatgttgcaatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgtt 446 || ||||||||||| || | |||||| || ||| || || || |||||||| ||||| Sbjct: 234 cagcaccatgttgcagtgcctgtcaaaggccttcacccggcccagcagcttcttcttgtt 175 Query: 447 ccggcagttgataagtacctgggtattgttcttgac 482 || ||||| || || || || || ||||||||||| Sbjct: 174 gcgacagttaatgagcacttgcgtgttgttcttgac 139
>ref|XM_576676.1| PREDICTED: Rattus norvegicus similar to small nuclear ribonucleoprotein polypeptide D2 (LOC501257), mRNA Length = 491 Score = 56.0 bits (28), Expect = 2e-04 Identities = 139/176 (78%) Strand = Plus / Minus Query: 280 ccgcggaggaacatcttgctgatgaacctgtccttgttcactggaagggccttcttcttg 339 ||||| |||||||||||| |||| | | ||||||||| || || || |||||||||| Sbjct: 321 ccgcgcaggaacatcttggagatgtagcggtccttgttgacaggcttggacttcttcttg 262 Query: 340 cctttgccagtctttggaacctcagtccacatctccctaacgttctcgagaaccatgttg 399 || ||||| |||| || ||||||||||| |||||| | || || || || ||||||||| Sbjct: 261 cccttgccgctcttggggacctcagtccatatctccttcacattttccagcaccatgttg 202 Query: 400 caatgacggtcaaatgctctcatgcgaccaagtagcttcttgttgttccggcagtt 455 || || | |||||| || ||| || || || |||||||||||||| || ||||| Sbjct: 201 cagtgcctgtcaaaggccttcacccggcccaggagcttcttgttgtttcgacagtt 146
>emb|CT010488.9| Mouse DNA sequence from clone RP23-133A3 on chromosome 9, complete sequence Length = 219139 Score = 54.0 bits (27), Expect = 7e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 309 gtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtcca 368 ||||||||| || ||| || ||||||||| || ||| || ||||||| ||||||||||| Sbjct: 210694 gtccttgttgacaggattggacttcttcttacccttgacactctttgggacctcagtcca 210635 Query: 369 catctcc 375 ||||||| Sbjct: 210634 catctcc 210628
>emb|AL162651.1|ATF26K9 Arabidopsis thaliana DNA chromosome 3, BAC clone F26K9 Length = 110257 Score = 54.0 bits (27), Expect = 7e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 247 ttggggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgatgaa 305 ||||||||||| || || || ||||| ||||| || || |||||||||||||||||||| Sbjct: 88705 ttggggttcctgaggacgataatgactgagtctccacgcaggaacatcttgctgatgaa 88763 Score = 46.1 bits (23), Expect = 0.16 Identities = 107/135 (79%) Strand = Plus / Plus Query: 357 aacctcagtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaatgc 416 ||||||||||||||| || || || || || |||||||||||||| || | |||||| || Sbjct: 88903 aacctcagtccacatttctctgacattttcaagaaccatgttgcagtgcctgtcaaaagc 88962 Query: 417 tctcatgcgaccaagtagcttcttgttgttccggcagttgataagtacctgggtattgtt 476 || | || ||||| || ||| ||||||| ||||| ||||| | ||||| || || || Sbjct: 88963 cctaactcggccaaggagtttcctgttgttacggcaattgatcaacacctgagtgttatt 89022 Query: 477 cttgacgctcatcat 491 ||| || |||||||| Sbjct: 89023 cttaacactcatcat 89037
>gb|AC155923.2| Mus musculus BAC clone RP24-488E11 from chromosome 9, complete sequence Length = 134932 Score = 54.0 bits (27), Expect = 7e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 309 gtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtcca 368 ||||||||| || ||| || ||||||||| || ||| || ||||||| ||||||||||| Sbjct: 2289 gtccttgttgacaggattggacttcttcttacccttgacactctttgggacctcagtcca 2230 Query: 369 catctcc 375 ||||||| Sbjct: 2229 catctcc 2223
>emb|AL928979.4| Zebrafish DNA sequence from clone DKEY-113G17, complete sequence Length = 193205 Score = 54.0 bits (27), Expect = 7e-04 Identities = 123/155 (79%) Strand = Plus / Plus Query: 250 gggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgatgaacctg 309 |||||||| || || | ||||||||||||||| | |||||||||||| |||| | | Sbjct: 122811 gggttcctcagcaccacgatgaccgagtcgcctctcaggaacatcttggagatgtagcga 122870 Query: 310 tccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtccac 369 || ||||||||||| | |||||||||||||||||| |||| || ||||| |||||| Sbjct: 122871 tctttgttcactggctttgacttcttcttgcctttgccgctcttgggcacctctgtccac 122930 Query: 370 atctccctaacgttctcgagaaccatgttgcaatg 404 || || | || ||||| |||||||| || ||||| Sbjct: 122931 atttctttcacattctccagaaccatattacaatg 122965 Score = 48.1 bits (24), Expect = 0.041 Identities = 39/44 (88%) Strand = Plus / Plus Query: 433 agcttcttgttgttccggcagttgataagtacctgggtattgtt 476 |||||||||||||| ||||||||||| || ||||| || ||||| Sbjct: 126421 agcttcttgttgttgcggcagttgatgaggacctgtgtgttgtt 126464
>emb|BX663502.9| Zebrafish DNA sequence from clone CH211-202C21 in linkage group 18, complete sequence Length = 188674 Score = 54.0 bits (27), Expect = 7e-04 Identities = 123/155 (79%) Strand = Plus / Plus Query: 250 gggttccttagaacaatgatgaccgagtcgccgcggaggaacatcttgctgatgaacctg 309 |||||||| || || | ||||||||||||||| | |||||||||||| |||| | | Sbjct: 100745 gggttcctcagcaccacgatgaccgagtcgcctctcaggaacatcttggagatgtagcga 100804 Query: 310 tccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtccac 369 || ||||||||||| | |||||||||||||||||| |||| || ||||| |||||| Sbjct: 100805 tctttgttcactggctttgacttcttcttgcctttgccgctcttgggcacctctgtccac 100864 Query: 370 atctccctaacgttctcgagaaccatgttgcaatg 404 || || | || ||||| |||||||| || ||||| Sbjct: 100865 atttctttcacattctccagaaccatattacaatg 100899 Score = 48.1 bits (24), Expect = 0.041 Identities = 39/44 (88%) Strand = Plus / Plus Query: 433 agcttcttgttgttccggcagttgataagtacctgggtattgtt 476 |||||||||||||| ||||||||||| || ||||| || ||||| Sbjct: 104174 agcttcttgttgttgcggcagttgatgaggacctgtgtgttgtt 104217
>emb|CT032728.1| Platynereis dumerilii EST IB0AAA32DE04FM1 Length = 699 Score = 54.0 bits (27), Expect = 7e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 433 agcttcttgttgttccggcagttgataagtacctgggtattgttcttgacg 483 |||||||||||||| | ||||||||| || ||||| || |||||||||||| Sbjct: 448 agcttcttgttgtttctgcagttgatgaggacctgtgtgttgttcttgacg 498
>ref|XM_323078.1| Neurospora crassa OR74A hypothetical protein (NCU03778.1) partial mRNA Length = 381 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 289 aacatcttgctgatgaacctgtccttgtt 317 |||||||||||||| |||||||||||||| Sbjct: 320 aacatcttgctgataaacctgtccttgtt 292
>ref|XM_956031.1| Neurospora crassa OR74A hypothetical protein (NCU03778.1) partial mRNA Length = 381 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 289 aacatcttgctgatgaacctgtccttgtt 317 |||||||||||||| |||||||||||||| Sbjct: 320 aacatcttgctgataaacctgtccttgtt 292
>emb|AL513466.1|NCB18D24 Neurospora crassa DNA linkage group V BAC contig B18D24 Length = 157180 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 289 aacatcttgctgatgaacctgtccttgtt 317 |||||||||||||| |||||||||||||| Sbjct: 129141 aacatcttgctgataaacctgtccttgtt 129169
>emb|AL596209.13| Mouse DNA sequence from clone RP23-278F12 on chromosome 11 Contains the 3' end of the Ulk2 gene for Unc-51 like kinase 2 (C. elegans), the Prpsap2 gene for phosphoribosyl pyrophosphate synthetase-associated protein 2, the gene for a novel sodium/glucose cotransporter protein, the gene for a novel protein (2310040C09Rik), the Grap gene for GRB2-related adaptor protein and a CpG island, complete sequence Length = 186359 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttcacattg 543 ||||||||||||||||||||||||| Sbjct: 182529 ctcctcctcctccttcttcacattg 182553
>gb|AY949615.1| Hylobates lar orthologous to Homo sapiens retroposed sequence ENSG00000148667 genomic sequence Length = 357 Score = 50.1 bits (25), Expect = 0.010 Identities = 58/69 (84%) Strand = Plus / Minus Query: 330 cttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcgag 389 |||||||||||| |||| |||| || |||||||||||||||||| | | |||||| || Sbjct: 258 cttcttcttgcccttgctgctcttgggtacctcagtccacatctccttcatgttctccag 199 Query: 390 aaccatgtt 398 |||||||| Sbjct: 198 caccatgtt 190
>gb|AY949613.1| Gorilla gorilla orthologous to Homo sapiens retroposed sequence ENSG00000148667 genomic sequence Length = 354 Score = 50.1 bits (25), Expect = 0.010 Identities = 58/69 (84%) Strand = Plus / Minus Query: 333 cttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcgagaac 392 ||||| ||| ||||| |||| || ||||| |||||||||||| | |||||||| || || Sbjct: 255 cttctcgcccttgccgctcttgggtacctcggtccacatctccttcacgttctccagcac 196 Query: 393 catgttgca 401 ||||||||| Sbjct: 195 catgttgca 187
>gb|AY431899.1| Aedes aegypti ASAP ID: 35871 small nuclear ribonucleoprotein mRNA sequence Length = 630 Score = 48.1 bits (24), Expect = 0.041 Identities = 39/44 (88%) Strand = Plus / Minus Query: 439 ttgttgttccggcagttgataagtacctgggtattgttcttgac 482 |||||||| |||||||| || || ||||| |||||||||||||| Sbjct: 284 ttgttgttgcggcagtttatgagaacctgagtattgttcttgac 241
>ref|XM_755835.1| Ustilago maydis 521 hypothetical protein (UM04781.1) partial mRNA Length = 336 Score = 48.1 bits (24), Expect = 0.041 Identities = 42/48 (87%) Strand = Plus / Minus Query: 270 gaccgagtcgccgcggaggaacatcttgctgatgaacctgtccttgtt 317 |||||||||||| || |||||||||||| |||||| | ||||||||| Sbjct: 309 gaccgagtcgccacgaaggaacatcttggagatgaagcggtccttgtt 262
>ref|XM_748269.1| Aspergillus fumigatus Af293 small nuclear ribonucleoprotein SmD2 (Afu5g12910) partial mRNA Length = 369 Score = 48.1 bits (24), Expect = 0.041 Identities = 39/44 (88%) Strand = Plus / Minus Query: 277 tcgccgcggaggaacatcttgctgatgaacctgtccttgttcac 320 ||||| || |||||||||||||||||||| | ||||||||||| Sbjct: 341 tcgcctcgcaggaacatcttgctgatgaagcgatccttgttcac 298 Score = 44.1 bits (22), Expect = 0.64 Identities = 43/50 (86%) Strand = Plus / Minus Query: 364 gtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaa 413 ||||||||||| | ||||||||||| ||||| ||||| || |||||||| Sbjct: 266 gtccacatctctttcacgttctcgagcaccatattgcagtggcggtcaaa 217
>ref|XM_654314.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1802.2), mRNA Length = 222 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Minus Query: 360 ctcagtccacatctccctaacgttctcgagaaccatgtt 398 ||||||||||||||| | |||||||| ||||||||||| Sbjct: 126 ctcagtccacatctctttgacgttctcaagaaccatgtt 88
>gb|BC066138.1| Mus musculus potassium voltage-gated channel, subfamily H (eag-related), member 5, mRNA (cDNA clone MGC:76437 IMAGE:30094199), complete cds Length = 3392 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttcacat 541 ||||||||||||||||||||||| Sbjct: 2210 ctcctcctcctccttcttcacat 2188
>ref|NM_172805.1| Mus musculus potassium voltage-gated channel, subfamily H (eag-related), member 5 (Kcnh5), mRNA Length = 4059 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttcacat 541 ||||||||||||||||||||||| Sbjct: 2869 ctcctcctcctccttcttcacat 2847
>emb|CT010432.7| Mouse DNA sequence from clone RP23-337G13 on chromosome 12, complete sequence Length = 207186 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttcacat 541 ||||||||||||||||||||||| Sbjct: 13738 ctcctcctcctccttcttcacat 13760
>gb|AC131762.2| Mus musculus BAC clone RP24-228J18 from chromosome 12, complete sequence Length = 157435 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttcacat 541 ||||||||||||||||||||||| Sbjct: 143865 ctcctcctcctccttcttcacat 143887
>emb|AL355384.6| Human DNA sequence from clone RP11-626C11 on chromosome 10 Contains a CpG island, complete sequence Length = 159305 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 83 caaactacaacactggaccagta 105 ||||||||||||||||||||||| Sbjct: 133381 caaactacaacactggaccagta 133403
>gb|AF526256.1| Chlamys farreri clone iolscfcl385ct402cn424 small nuclear ribonucleoprotein D2-like protein mRNA, complete cds Length = 575 Score = 46.1 bits (23), Expect = 0.16 Identities = 71/87 (81%) Strand = Plus / Minus Query: 331 ttcttcttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcgaga 390 |||||||| || || || || ||||| || ||||||||||| ||| |||| || || | | Sbjct: 334 ttcttctttccctttcctgtttttggtacttcagtccacatttccttaacattttccaaa 275 Query: 391 accatgttgcaatgacggtcaaatgct 417 ||||| |||||||| | |||||||||| Sbjct: 274 accatattgcaatgcctgtcaaatgct 248 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 499 gacaggggcccggtgctgaactcctcct 526 ||||||||||| ||| |||||||||||| Sbjct: 166 gacaggggcccagtgttgaactcctcct 139
>dbj|AB225845.1| Aspergillus oryzae cDNA, contig sequence: AoEST2700 Length = 893 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Minus Query: 267 gatgaccgagtcgccgcggaggaacatcttgctgatgaa 305 |||||| ||||| || || |||||||||||||||||||| Sbjct: 371 gatgacggagtcaccacgcaggaacatcttgctgatgaa 333
>dbj|AK032438.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430546I09 product:EAG K+ CHANNEL, ISOFORM 2 homolog [Rattus norvegicus] (Kcnh5), full insert sequence Length = 4059 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttcacat 541 ||||||||||||||||||||||| Sbjct: 2869 ctcctcctcctccttcttcacat 2847
>emb|AL731780.6| Mouse DNA sequence from clone RP23-365D10 on chromosome 4, complete sequence Length = 78870 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 517 aactcctcctcctccttcttcac 539 ||||||||||||||||||||||| Sbjct: 48385 aactcctcctcctccttcttcac 48407
>ref|XM_361539.1| Magnaporthe grisea 70-15 hypothetical protein (MG04013.4) partial mRNA Length = 354 Score = 44.1 bits (22), Expect = 0.64 Identities = 34/38 (89%) Strand = Plus / Minus Query: 364 gtccacatctccctaacgttctcgagaaccatgttgca 401 |||||||||||| | ||||||||||| ||||| ||||| Sbjct: 242 gtccacatctccttcacgttctcgagcaccatattgca 205
>gb|AC113292.6| Mus musculus chromosome 15, clone RP23-418M3, complete sequence Length = 218109 Score = 44.1 bits (22), Expect = 0.64 Identities = 55/66 (83%) Strand = Plus / Minus Query: 336 cttgcctttgccagtctttggaacctcagtccacatctccctaacgttctcgagaaccat 395 |||||| ||||| |||| || |||||||||||||||||| | || || || || ||||| Sbjct: 147612 cttgcccttgccgctcttggggacctcagtccacatctccttcacattttccagcaccat 147553 Query: 396 gttgca 401 |||||| Sbjct: 147552 gttgca 147547
>ref|XM_505089.1| Yarrowia lipolytica CLIB122, YALI0F06644g predicted mRNA Length = 348 Score = 44.1 bits (22), Expect = 0.64 Identities = 43/50 (86%) Strand = Plus / Minus Query: 364 gtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaa 413 |||||||||||| | |||||||| || ||||||||| | || |||||||| Sbjct: 236 gtccacatctccttcacgttctccagcaccatgttggagtgccggtcaaa 187
>emb|CR387999.7| Opossum DNA sequence from clone XX-158F12, complete sequence Length = 169093 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 329 ccttcttcttgcctttgccagt 350 |||||||||||||||||||||| Sbjct: 17462 ccttcttcttgcctttgccagt 17441
>gb|AC079222.17| Mus musculus chromosome 1, clone RP22-292L24, complete sequence Length = 159700 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 517 aactcctcctcctccttcttca 538 |||||||||||||||||||||| Sbjct: 91602 aactcctcctcctccttcttca 91581
>ref|XM_677877.1| PREDICTED: Danio rerio similar to zinc finger protein 658 (LOC555384), mRNA Length = 1281 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttcaca 540 |||||||||||||||||||||| Sbjct: 1167 ctcctcctcctccttcttcaca 1146 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttcaca 540 |||||||||||||||||||||| Sbjct: 813 ctcctcctcctccttcttcaca 792
>dbj|AK017575.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730419F03 product:unclassifiable, full insert sequence Length = 2092 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 517 aactcctcctcctccttcttca 538 |||||||||||||||||||||| Sbjct: 2063 aactcctcctcctccttcttca 2042
>gb|AF179588.1|AF179588 Rattus norvegicus Slp-b gene, exon 1b Length = 14044 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttcaca 540 |||||||||||||||||||||| Sbjct: 8894 ctcctcctcctccttcttcaca 8915
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 44.1 bits (22), Expect = 0.64 Identities = 43/50 (86%) Strand = Plus / Minus Query: 364 gtccacatctccctaacgttctcgagaaccatgttgcaatgacggtcaaa 413 |||||||||||| | |||||||| || ||||||||| | || |||||||| Sbjct: 981188 gtccacatctccttcacgttctccagcaccatgttggagtgccggtcaaa 981139
>gb|AC165151.2| Mus musculus BAC clone RP24-77O15 from chromosome 16, complete sequence Length = 177446 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttcac 539 ||||||||||||||||||||| Sbjct: 62856 ctcctcctcctccttcttcac 62836
>gb|AF202880.1| Pagrus auratus microsatellite GA1 sequence Length = 812 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 517 aactcctcctcctccttcttc 537 ||||||||||||||||||||| Sbjct: 220 aactcctcctcctccttcttc 240
>gb|BC077664.1| Xenopus tropicalis MGC89748 protein, mRNA (cDNA clone MGC:89748 IMAGE:7027295), complete cds Length = 684 Score = 42.1 bits (21), Expect = 2.5 Identities = 54/65 (83%) Strand = Plus / Minus Query: 307 ctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtc 366 ||||| ||||||||||| || |||||| || || |||||| |||| || ||||||||| Sbjct: 353 ctgtctttgttcactggtttggacttcttttttcccttgccactcttagggacctcagtc 294 Query: 367 cacat 371 ||||| Sbjct: 293 cacat 289
>gb|CP000061.1| Aster yellows witches'-broom phytoplasma AYWB, complete genome Length = 706569 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 518 actcctcctcctccttcttca 538 ||||||||||||||||||||| Sbjct: 673474 actcctcctcctccttcttca 673454
>gb|AC103613.7| Mus musculus chromosome 14, clone RP24-75B12, complete sequence Length = 191158 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttcac 539 ||||||||||||||||||||| Sbjct: 105776 ctcctcctcctccttcttcac 105756
>gb|AC124473.2| Mus musculus BAC clone RP24-86K23 from chromosome 3, complete sequence Length = 185436 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttcac 539 ||||||||||||||||||||| Sbjct: 73723 ctcctcctcctccttcttcac 73703
>ref|XM_539112.2| PREDICTED: Canis familiaris similar to small nuclear ribonucleoprotein D2 (LOC481991), mRNA Length = 361 Score = 42.1 bits (21), Expect = 2.5 Identities = 75/93 (80%) Strand = Plus / Minus Query: 309 gtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtcca 368 ||||||||| ||||| || |||||||||||| |||| |||| || |||| ||||| Sbjct: 283 gtccttgttgactggcttggacttcttcttgcccttgctgctcttgggtaccttggtcca 224 Query: 369 catctccctaacgttctcgagaaccatgttgca 401 ||||||| | || ||||| || ||||||||||| Sbjct: 223 catctccttcacattctccagcaccatgttgca 191 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 450 gcagttgataagtacctgggtattgttcttgac 482 |||||| ||||| |||||||| ||||||||||| Sbjct: 145 gcagttaataagcacctgggtgttgttcttgac 113
>gb|AC115294.5| Mus musculus BAC clone RP23-97A19 from chromosome 3, complete sequence Length = 149451 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttcac 539 ||||||||||||||||||||| Sbjct: 140042 ctcctcctcctccttcttcac 140022
>gb|AC126691.3| Mus musculus BAC clone RP23-221H11 from 14, complete sequence Length = 208027 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttcac 539 ||||||||||||||||||||| Sbjct: 122062 ctcctcctcctccttcttcac 122042
>emb|CR663568.2|CNS0FAZA Tetraodon nigroviridis full-length cDNA Length = 945 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 517 aactcctcctcctccttcttc 537 ||||||||||||||||||||| Sbjct: 265 aactcctcctcctccttcttc 245
>emb|AL133407.25| Human DNA sequence from clone RP3-395K14 on chromosome 6q13-14.3 Contains part of a novel gene, complete sequence Length = 163431 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttcac 539 ||||||||||||||||||||| Sbjct: 45428 ctcctcctcctccttcttcac 45448
>ref|XM_795053.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC581735 (LOC581735), mRNA Length = 147 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttcac 539 ||||||||||||||||||||| Sbjct: 57 ctcctcctcctccttcttcac 37
>gb|AC164558.2| Mus musculus BAC clone RP23-238F5 from chromosome 16, complete sequence Length = 186421 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttcac 539 ||||||||||||||||||||| Sbjct: 110301 ctcctcctcctccttcttcac 110281
>emb|AL929071.6| Mouse DNA sequence from clone RP24-450M24 on chromosome 11 Contains the gene for a novel solute carrier family 13 (sodium-dependent dicarboxylate transporter) (Slc13a2 or 3) member, a novel gene, the gene for a novel TRAF-type zinc finger protein, the gene for a novel F-box domain containing protein, the Tekt1 gene for tektin 1 and a CpG island, complete sequence Length = 154561 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttcac 539 ||||||||||||||||||||| Sbjct: 142411 ctcctcctcctccttcttcac 142391
>emb|AL713870.26| Mouse DNA sequence from clone RP24-239D8 on chromosome 11 Contains the 5' end of the Slc36a3 gene for solute carrier family 36 (proton/amino acid symporter) member 3, two novel genes, the Tramd1 gene for tramdorin 1 (transmembrane domain rich protein), the Slc36a1 gene for solute carrier family 36 (proton/amino acid symporter) member 1 and the gene for the ortholog of human and rat FAT tumor suppressor homolog 2 (Drosophila) FAT2, complete sequence Length = 188782 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttcac 539 ||||||||||||||||||||| Sbjct: 30404 ctcctcctcctccttcttcac 30384
>emb|AL645611.9| Mouse DNA sequence from clone RP23-432O24 on chromosome 11 Contains part of the Adamts2 gene for a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif 2, complete sequence Length = 69492 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttcac 539 ||||||||||||||||||||| Sbjct: 28890 ctcctcctcctccttcttcac 28870
>gb|AC099307.1| Drosophila melanogaster, chromosome 2R, region 57C-57D, BAC clone BACR13H23, complete sequence Length = 179139 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttcac 539 ||||||||||||||||||||| Sbjct: 148258 ctcctcctcctccttcttcac 148278
>gb|AC159231.2| Mus musculus BAC clone RP24-387F20 from chromosome 13, complete sequence Length = 150809 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 517 aactcctcctcctccttcttc 537 ||||||||||||||||||||| Sbjct: 90103 aactcctcctcctccttcttc 90083
>gb|AC160946.6| Mus musculus 10 BAC RP23-175G6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 192628 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttcac 539 ||||||||||||||||||||| Sbjct: 161159 ctcctcctcctccttcttcac 161179
>gb|AC153965.4| Mus musculus 10 BAC RP24-377E21 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 166350 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttcac 539 ||||||||||||||||||||| Sbjct: 18924 ctcctcctcctccttcttcac 18944
>ref|NM_001005128.1| Xenopus tropicalis MGC89748 protein (MGC89748), mRNA Length = 684 Score = 42.1 bits (21), Expect = 2.5 Identities = 54/65 (83%) Strand = Plus / Minus Query: 307 ctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtc 366 ||||| ||||||||||| || |||||| || || |||||| |||| || ||||||||| Sbjct: 353 ctgtctttgttcactggtttggacttcttttttcccttgccactcttagggacctcagtc 294 Query: 367 cacat 371 ||||| Sbjct: 293 cacat 289
>gb|AC016712.6| Homo sapiens BAC clone RP11-266F17 from 2, complete sequence Length = 159748 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttcac 539 ||||||||||||||||||||| Sbjct: 72032 ctcctcctcctccttcttcac 72052
>gb|AC078845.2|AC078845 Homo sapiens chromosome 7 clone RP11-707A19, complete sequence Length = 161514 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttcac 539 ||||||||||||||||||||| Sbjct: 50253 ctcctcctcctccttcttcac 50273
>gb|AC105029.7| Homo sapiens chromosome 8, clone CTD-2210A23, complete sequence Length = 123934 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttcac 539 ||||||||||||||||||||| Sbjct: 113321 ctcctcctcctccttcttcac 113341
>dbj|AP003213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0054L14 Length = 150022 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttcac 539 ||||||||||||||||||||| Sbjct: 101334 ctcctcctcctccttcttcac 101314
>dbj|AP002970.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504D03 Length = 139201 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttcac 539 ||||||||||||||||||||| Sbjct: 50534 ctcctcctcctccttcttcac 50514
>gb|AC153636.2| Mus musculus 6 BAC RP23-76E12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 164242 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttcac 539 ||||||||||||||||||||| Sbjct: 92784 ctcctcctcctccttcttcac 92764
>emb|CR760591.2| Xenopus tropicalis finished cDNA, clone TEgg050o07 Length = 633 Score = 42.1 bits (21), Expect = 2.5 Identities = 54/65 (83%) Strand = Plus / Minus Query: 307 ctgtccttgttcactggaagggccttcttcttgcctttgccagtctttggaacctcagtc 366 ||||| ||||||||||| || |||||| || || |||||| |||| || ||||||||| Sbjct: 297 ctgtctttgttcactggtttggacttcttttttcccttgccactcttagggacctcagtc 238 Query: 367 cacat 371 ||||| Sbjct: 237 cacat 233
>gb|AE003454.3| Drosophila melanogaster chromosome 2R, section 62 of 73 of the complete sequence Length = 313634 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttcac 539 ||||||||||||||||||||| Sbjct: 138093 ctcctcctcctccttcttcac 138113
>gb|AC138245.11| Mus musculus chromosome 17, clone RP23-75D10, complete sequence Length = 216692 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 517 aactcctcctcctccttcttc 537 ||||||||||||||||||||| Sbjct: 180964 aactcctcctcctccttcttc 180944
>gb|AC131325.8| Mus musculus chromosome 17, clone RP23-431O10, complete sequence Length = 191331 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 517 aactcctcctcctccttcttc 537 ||||||||||||||||||||| Sbjct: 174431 aactcctcctcctccttcttc 174451
>gb|BC087453.1| Xenopus laevis hypothetical LOC496154, mRNA (cDNA clone MGC:99274 IMAGE:7210989), complete cds Length = 2122 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttcac 539 ||||||||||||||||||||| Sbjct: 1020 ctcctcctcctccttcttcac 1000
>gb|AC161883.6| Mus musculus BAC clone RP23-91K1 from chromosome 14, complete sequence Length = 206274 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttcac 539 ||||||||||||||||||||| Sbjct: 204689 ctcctcctcctccttcttcac 204669
>gb|AC004300.1|AC004300 Drosophila melanogaster DNA sequence (P1 DS08209 (D186)), complete sequence Length = 58663 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttcac 539 ||||||||||||||||||||| Sbjct: 22353 ctcctcctcctccttcttcac 22373
>emb|CT033772.6| Mouse DNA sequence from clone RP23-144A16 on chromosome 17, complete sequence Length = 214867 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttcac 539 ||||||||||||||||||||| Sbjct: 136073 ctcctcctcctccttcttcac 136093
>gb|AC122017.5| Mus musculus BAC clone RP24-361J4 from 7, complete sequence Length = 158807 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 517 aactcctcctcctccttcttc 537 ||||||||||||||||||||| Sbjct: 77747 aactcctcctcctccttcttc 77767
>emb|CT009604.11| Mouse DNA sequence from clone RP23-4J22 on chromosome 13, complete sequence Length = 209356 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 517 aactcctcctcctccttcttc 537 ||||||||||||||||||||| Sbjct: 141604 aactcctcctcctccttcttc 141624
>gb|AC149064.3| Mus musculus BAC clone RP23-140I7 from 18, complete sequence Length = 183953 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 521 cctcctcctccttcttcacat 541 ||||||||||||||||||||| Sbjct: 84034 cctcctcctccttcttcacat 84014
>gb|AC170600.2| Mus musculus BAC clone RP23-300L16 from chromosome 14, complete sequence Length = 216861 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttcac 539 ||||||||||||||||||||| Sbjct: 55813 ctcctcctcctccttcttcac 55793
>gb|AC101952.15| Mus musculus chromosome 5, clone RP24-155B4, complete sequence Length = 163118 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 69152 ctcctcctcctccttcttca 69133
>gb|AC102381.12| Mus musculus chromosome 8, clone RP24-180I19, complete sequence Length = 190298 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 140223 ctcctcctcctccttcttca 140204
>gb|AC113013.15| Mus musculus chromosome 7, clone RP23-174K7, complete sequence Length = 235823 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 10365 ctcctcctcctccttcttca 10384
>gb|AC102616.7| Mus musculus chromosome 18, clone RP23-425L21, complete sequence Length = 192276 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 180216 ctcctcctcctccttcttca 180235
>ref|NM_115386.2| Arabidopsis thaliana RNA binding / structural constituent of ribosome AT3G55280 mRNA, complete cds Length = 773 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 gatctgaatagaaactatga 43 |||||||||||||||||||| Sbjct: 759 gatctgaatagaaactatga 740
>gb|AC162942.5| Mus musculus BAC clone RP23-80K12 from chromosome 14, complete sequence Length = 227944 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 actcctcctcctccttcttc 537 |||||||||||||||||||| Sbjct: 61062 actcctcctcctccttcttc 61081
>gb|AC154516.2| Mus musculus BAC clone RP24-83D23 from chromosome 14, complete sequence Length = 216566 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 108378 ctcctcctcctccttcttca 108397
>gb|AC167963.5| Mus musculus chromosome 1, clone RP24-171A4, complete sequence Length = 172954 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 66730 ctcctcctcctccttcttca 66749
>gb|AC168306.7| Mus musculus chromosome 18, clone RP23-225N9, complete sequence Length = 198815 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 84926 ctcctcctcctccttcttca 84907
>gb|AC101795.9| Mus musculus chromosome 5, clone RP24-201P24, complete sequence Length = 170688 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 actcctcctcctccttcttc 537 |||||||||||||||||||| Sbjct: 103275 actcctcctcctccttcttc 103294
>gb|AC168269.3| Mus musculus BAC clone RP23-193M17 from chromosome 17, complete sequence Length = 223337 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 184970 ctcctcctcctccttcttca 184951
>gb|AC103624.9| Mus musculus chromosome 5, clone RP24-258B22, complete sequence Length = 172330 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttcacatt 542 ||||||||||||||||||| |||| Sbjct: 86685 ctcctcctcctccttcttctcatt 86708
>ref|XM_633891.1| Dictyostelium discoideum hypothetical protein (DDB0185647), partial mRNA Length = 3963 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 248 ctcctcctcctccttcttca 267
>gb|AC155818.5| Mus musculus BAC clone RP23-397H1 from chromosome 8, complete sequence Length = 191112 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 102432 ctcctcctcctccttcttca 102413
>gb|AC154520.3| Mus musculus BAC clone RP23-471P16 from chromosome 14, complete sequence Length = 199186 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 177466 ctcctcctcctccttcttca 177447
>gb|AC161528.14| Mus musculus chromosome 8, clone RP23-369H18, complete sequence Length = 206302 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 145015 ctcctcctcctccttcttca 145034
>ref|XM_483340.1| Oryza sativa (japonica cultivar-group), mRNA Length = 884 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 257 ctcctcctcctccttcttca 238
>ref|NM_192944.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 801 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 gaactcctcctcctccttct 535 |||||||||||||||||||| Sbjct: 669 gaactcctcctcctccttct 650
>gb|AC158121.12| Mus musculus chromosome 5, clone RP23-440H19, complete sequence Length = 202895 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 gctgaactcctcctcctcct 532 |||||||||||||||||||| Sbjct: 194962 gctgaactcctcctcctcct 194943
>gb|AC120865.7| Mus musculus chromosome 5, clone RP23-88L6, complete sequence Length = 235287 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 143294 ctcctcctcctccttcttca 143275
>gb|AC104196.8| Mus musculus chromosome 5, clone RP24-239K15, complete sequence Length = 160345 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttcacatt 542 ||||||||||||||||||| |||| Sbjct: 52799 ctcctcctcctccttcttcccatt 52822
>gb|AY750865.1| Toxoptera citricida putative small nuclear ribonucleoprotein D2-like protein mRNA, complete cds Length = 378 Score = 40.1 bits (20), Expect = 10.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 328 gccttcttcttgcctttgccagtctttggaacctcagtccacat 371 ||||| ||||||||||||||||| || || | ||||||||||| Sbjct: 263 gcctttttcttgcctttgccagttttaggtaattcagtccacat 220
>gb|AC124659.10| Mus musculus chromosome 15, clone RP24-167K18, complete sequence Length = 180859 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 112665 ctcctcctcctccttcttca 112684
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 516 gaactcctcctcctccttcttcac 539 ||||||||||||||||| |||||| Sbjct: 274488 gaactcctcctcctcctccttcac 274465
>ref|NM_028527.1| Mus musculus RIKEN cDNA 1700047I17 gene (1700047I17Rik), mRNA Length = 3863 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 543 ctcctcctcctccttcttca 524
>gb|AC102430.9| Mus musculus chromosome 14, clone RP24-103F5, complete sequence Length = 153864 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 94556 ctcctcctcctccttcttca 94537
>gb|AC159319.2| Mus musculus BAC clone RP23-37C8 from chromosome 9, complete sequence Length = 175636 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 156681 ctcctcctcctccttcttca 156662
>gb|AC163679.3| Mus musculus BAC clone RP24-104E24 from chromosome 16, complete sequence Length = 193718 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 59287 ctcctcctcctccttcttca 59306
>gb|AC159249.3| Mus musculus BAC clone RP24-177C7 from chromosome y, complete sequence Length = 146406 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 39966 ctcctcctcctccttcttca 39947
>gb|AC154760.2| Mus musculus BAC clone RP24-414E6 from chromosome 14, complete sequence Length = 163089 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 116255 ctcctcctcctccttcttca 116236
>gb|AC102856.5| Mus musculus chromosome 8, clone RP24-500H8, complete sequence Length = 195286 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 tcatctgttaaacactcact 153 |||||||||||||||||||| Sbjct: 123970 tcatctgttaaacactcact 123989
>gb|AC101948.10| Mus musculus chromosome 15, clone RP24-139K14, complete sequence Length = 182534 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 45366 ctcctcctcctccttcttca 45385
>gb|AC106834.9| Mus musculus chromosome 19, clone RP24-132H7, complete sequence Length = 177277 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 30841 ctcctcctcctccttcttca 30822
>gb|AC122117.10| Mus musculus chromosome 18, clone RP23-61O22, complete sequence Length = 207024 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 158399 ctcctcctcctccttcttca 158418
>ref|XM_419552.1| PREDICTED: Gallus gallus similar to protein related to DAN and cerberus (LOC421507), mRNA Length = 715 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 ctcctcctccttcttcacat 541 |||||||||||||||||||| Sbjct: 553 ctcctcctccttcttcacat 534
>gb|AC115706.7| Mus musculus chromosome 8, clone RP23-382B3, complete sequence Length = 182509 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 165022 ctcctcctcctccttcttca 165003
>gb|AC147225.3| Mus musculus BAC clone RP23-105L19 from chromosome 6, complete sequence Length = 210239 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 actcctcctcctccttcttc 537 |||||||||||||||||||| Sbjct: 169806 actcctcctcctccttcttc 169825
>gb|AC140300.3| Mus musculus BAC clone RP23-373O10 from chromosome 17, complete sequence Length = 189769 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 3780 ctcctcctcctccttcttca 3761
>gb|DQ157224.1| Taenia solium 18S ribosomal RNA gene, complete sequence Length = 2434 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 1885 ctcctcctcctccttcttca 1904
>gb|AC107795.17| Mus musculus chromosome 1, clone RP23-433P9, complete sequence Length = 216501 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 13329 ctcctcctcctccttcttca 13310
>gb|AC115028.17| Mus musculus chromosome 5, clone RP24-245G22, complete sequence Length = 188423 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 98279 ctcctcctcctccttcttca 98298
>gb|AC168278.2| Mus musculus BAC RP24-83C9 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 247493 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 actcctcctcctccttcttc 537 |||||||||||||||||||| Sbjct: 147002 actcctcctcctccttcttc 146983
>gb|AC129219.3| Mus musculus BAC clone RP24-474C15 from chromosome 14, complete sequence Length = 195935 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 186058 ctcctcctcctccttcttca 186077
>gb|AC127584.3| Mus musculus BAC clone RP24-126H1 from chromosome 14, complete sequence Length = 154930 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 actcctcctcctccttcttc 537 |||||||||||||||||||| Sbjct: 98026 actcctcctcctccttcttc 98045
>gb|AC135359.2| Mus musculus BAC clone RP24-209E17 from chromosome 5, complete sequence Length = 199822 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 16656 ctcctcctcctccttcttca 16675
>gb|AC162612.2| Mus musculus chromosome 19, clone RP24-334K20, complete sequence Length = 145561 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 134655 ctcctcctcctccttcttca 134636
>gb|AC146540.2| Gasterosteus aculeatus clone CH213-16D10, complete sequence Length = 212474 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 522 ctcctcctccttcttcacattggc 545 ||||||||||| |||||||||||| Sbjct: 153568 ctcctcctcctccttcacattggc 153591
>gb|AC104716.4| Homo sapiens chromosome 8 clone RP11-81A21 map q24.13, complete sequence Length = 147651 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 124321 ctcctcctcctccttcttca 124340
>gb|AF216671.7| Homo sapiens chromosome 8 clone RP11-300I14 map q24.13, complete sequence Length = 183027 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 101933 ctcctcctcctccttcttca 101952
>gb|AC133331.3| Homo sapiens chromosome 8 clone RP11-156O22 map q24.13, complete sequence Length = 174972 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 86406 ctcctcctcctccttcttca 86425
>gb|AC137967.14| Mus musculus chromosome 10, clone RP24-323I24, complete sequence Length = 199669 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 185856 ctcctcctcctccttcttca 185837
>gb|AC153594.15| Mus musculus 10 BAC RP23-98N14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208555 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 83141 ctcctcctcctccttcttca 83122
>gb|AC112675.12| Mus musculus chromosome 1, clone RP23-138J12, complete sequence Length = 278715 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 132937 ctcctcctcctccttcttca 132918
>gb|AC093483.6| Mus musculus chromosome 9, clone RP23-79K5, complete sequence Length = 262048 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 97154 ctcctcctcctccttcttca 97135
>gb|AC150896.6| Mus musculus BAC clone RP23-414N3 from chromosome 1, complete sequence Length = 207503 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 55246 ctcctcctcctccttcttca 55265
>gb|AC158776.5| Mus musculus chromosome 15, clone RP23-261G10, complete sequence Length = 192769 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 97906 ctcctcctcctccttcttca 97925
>gb|AC154330.2| Mus musculus BAC clone RP23-286H23 from chromosome 16, complete sequence Length = 203553 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 115002 ctcctcctcctccttcttca 115021
>gb|AC124736.3| Mus musculus BAC clone RP23-318J20 from chromosome 15, complete sequence Length = 201803 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 148911 ctcctcctcctccttcttca 148892
>ref|XM_976355.1| PREDICTED: Mus musculus similar to signal recognition particle 54, transcript variant 2 (LOC665155), mRNA Length = 5301 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 602 ctcctcctcctccttcttca 583
>ref|XM_976391.1| PREDICTED: Mus musculus similar to signal recognition particle 54, transcript variant 3 (LOC665155), mRNA Length = 6782 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 2083 ctcctcctcctccttcttca 2064
>gb|AC092424.4| Homo sapiens BAC clone RP13-572K6 from 7, complete sequence Length = 82435 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 actcctcctcctccttcttc 537 |||||||||||||||||||| Sbjct: 61095 actcctcctcctccttcttc 61076
>gb|AC113311.9| Mus musculus chromosome 1, clone RP23-440J24, complete sequence Length = 260120 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 99375 ctcctcctcctccttcttca 99394
>gb|AC136743.5| Mus musculus chromosome 9, clone RP23-149D5, complete sequence Length = 213343 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttcacattggca 546 ||||||||||||||||||| ||||||| Sbjct: 168179 ctcctcctcctccttcttctaattggca 168206
>ref|XR_002169.1| PREDICTED: Mus musculus hypothetical protein LOC668365 (LOC668365), mRNA Length = 385 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 202 ctcctcctcctccttcttca 183
>gb|AC132429.2| Mus musculus BAC clone RP23-203O20 from chromosome 1, complete sequence Length = 199083 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 59120 ctcctcctcctccttcttca 59139
>gb|AC146607.2| Mus musculus BAC clone RP23-209N19 from chromosome 3, complete sequence Length = 173758 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 aactcctcctcctccttctt 536 |||||||||||||||||||| Sbjct: 103689 aactcctcctcctccttctt 103708
>gb|AC127699.4| Mus musculus BAC clone RP24-114P21 from chromosome 7, complete sequence Length = 152811 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 actcctcctcctccttcttc 537 |||||||||||||||||||| Sbjct: 100001 actcctcctcctccttcttc 99982
>emb|CT009519.4| Mouse DNA sequence from clone RP23-145L1 on chromosome 14, complete sequence Length = 216678 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 183514 ctcctcctcctccttcttca 183533
>emb|CR352251.11| Zebrafish DNA sequence from clone CH211-138M21 in linkage group 10, complete sequence Length = 175847 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 116656 ctcctcctcctccttcttca 116637
>gb|AC124472.4| Mus musculus BAC clone RP24-83E15 from chromosome 7, complete sequence Length = 204477 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 100547 ctcctcctcctccttcttca 100528
>gb|BC049669.1| Mus musculus RIKEN cDNA 1700047I17 gene, mRNA (cDNA clone MGC:58495 IMAGE:6535412), complete cds Length = 861 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 602 ctcctcctcctccttcttca 583
>gb|AC130549.4| Mus musculus BAC clone RP24-456I3 from chromosome 7, complete sequence Length = 160449 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttcacatt 542 ||||||||||||||||||| |||| Sbjct: 120608 ctcctcctcctccttcttctcatt 120585
>gb|AC124461.3| Mus musculus BAC clone RP24-144C5 from chromosome 7, complete sequence Length = 185788 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 133138 ctcctcctcctccttcttca 133157
>gb|AC126044.4| Mus musculus BAC clone RP23-12O8 from chromosome 1, complete sequence Length = 213412 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ctcctcctcctccttcttca 538 |||||||||||||||||||| Sbjct: 38942 ctcctcctcctccttcttca 38923
>gb|AC132620.3| Mus musculus BAC clone RP23-179A12 from chromosome 6, complete sequence Length = 178174 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 actcctcctcctccttcttc 537 |||||||||||||||||||| Sbjct: 59703 actcctcctcctccttcttc 59684 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,922,312 Number of Sequences: 3902068 Number of extensions: 6922312 Number of successful extensions: 477530 Number of sequences better than 10.0: 430 Number of HSP's better than 10.0 without gapping: 432 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 471658 Number of HSP's gapped (non-prelim): 5801 length of query: 728 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 705 effective length of database: 17,143,297,704 effective search space: 12086024881320 effective search space used: 12086024881320 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
