Clone Name | rbasd26p08 |
---|---|
Clone Library Name | barley_pub |
>gb|AY111994.1| Zea mays CL3266_1 mRNA sequence Length = 672 Score = 200 bits (101), Expect = 3e-48 Identities = 197/230 (85%) Strand = Plus / Plus Query: 169 cttgttgaggttgaagggcagggagtagaactcctcgctcctggcgtccttcttgaagct 228 ||||||||||||||||||||| ||||||||||||||||| | | |||| |||||||||| Sbjct: 342 cttgttgaggttgaagggcagcgagtagaactcctcgctgcggctgtccgtcttgaagct 401 Query: 229 cctgaacttgtcccaccagtggtaccctctgtccttcctcaccgngctctggtgcaggtg 288 || ||||||||||||||||||||| || |||||| ||||||| ||| | ||| || Sbjct: 402 ccggaacttgtcccaccagtggtagcccctgtccctcctcacgccgctgtcacgcacctg 461 Query: 289 catcgtgttgtccaggaagtaggccaccagccccgccacgaacggnttgttcgagaaggg 348 |||||||||||||| ||| ||||||||||| | ||||||||||| || ||||||||| Sbjct: 462 gatcgtgttgtccagtaagaaggccaccagcacagccacgaacggcttcgacgagaaggg 521 Query: 349 cacgttgatcatgtngttgaaccatctagcgcccgtgtgcaccgggccat 398 |||||||||||||| ||||||||||| ||||| |||||||| ||||||| Sbjct: 522 cacgttgatcatgtcgttgaaccatcgggcgccggtgtgcacggggccat 571
>gb|AY108075.1| Zea mays PCO139016 mRNA sequence Length = 1136 Score = 161 bits (81), Expect = 3e-36 Identities = 227/276 (82%), Gaps = 1/276 (0%) Strand = Plus / Minus Query: 218 ttcttgaagctcctgaacttgtcccaccagtggtaccctctgtccttcctcaccgngctc 277 ||| |||||||||||||||| ||||||||||||| || |||||||||||||||| |||| Sbjct: 1132 ttcntgaagctcctgaacttctcccaccagtggttgcccctgtccttcctcaccgcgctc 1073 Query: 278 tggtgcaggtgcatcgtgttgtccaggaagtaggccaccagccccgccacgaacggnttg 337 | | | || | ||||||||||||| ||||| |||| ||| || |||||||| || Sbjct: 1072 tcctttacctggagggtgttgtccaggatataggctaccaacccagcgacgaacggcttc 1013 Query: 338 ttcgagaagggcacgttgatcatgtngttgaaccatctagcgcccgtgtgcaccgggcca 397 || ||| |||||||||||||||| ||||||||||| ||||| ||||||||||| ||| Sbjct: 1012 gacgtgaatggcacgttgatcatgtcattgaaccatctggcgccagtgtgcaccggacca 953 Query: 398 tggcccgagacggaggcgtactctnttgaagtactgaggaaccgatatgccgatgaagaa 457 | || | |||| | |||||| |||||||||||||||||||||| ||| |||||||| Sbjct: 952 tagcttgcaacggctgtgtactc-gttgaagtactgaggaaccgataggcccatgaagaa 894 Query: 458 ggagaagcccaggatgaacttggtcctgaagctgtt 493 | ||| |||| ||||||||||||||| |||||||| Sbjct: 893 agcgaaccccatgatgaacttggtcctaaagctgtt 858
>ref|XM_450798.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2391 Score = 159 bits (80), Expect = 1e-35 Identities = 269/332 (81%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 162 ggaagaacttgttgaggttgaagggcagggagtagaactcctcgctcctggcgtccttct 221 ||||||||||||| || ||||| || | |||||||| || |||||||| ||||| |||| Sbjct: 2106 ggaagaacttgttcagattgaacggtaacgagtagaattcttcgctcctcgcgtctttct 2047 Query: 222 tgaagctcctgaacttgtcccaccagtggtaccctctgtccttcctcaccgngctctggt 281 ||||||||||||| ||||||||||| ||||| ||||| ||||||||||||| | | | || Sbjct: 2046 tgaagctcctgaatttgtcccaccaatggtagcctctatccttcctcaccgtgttattgt 1987 Query: 282 gcaggtgcatcgtgttgtccaggaagtaggccaccagccccgccacgaacggnttgttcg 341 || | ||||||||||| |||||||||||||| || ||||| || ||||| || || Sbjct: 1986 gcgtctcgatcgtgttgtcgaggaagtaggccacaagacccgcgacaaacggcttcgacg 1927 Query: 342 agaagggcacgttgatcatgtngttgaaccatctagcgcccgtgtgcaccgggccatggc 401 |||| |||||||| ||||| | ||||||||||| || || |||||||| || |||| | Sbjct: 1926 agaacggcacgtttatcatatcattgaaccatctggcaccagtgtgcactggtccataac 1867 Query: 402 ccgagacggaggcgtactctnttgaagtactgaggaaccgatatgccgatgaagaaggag 461 | | || | | |||||| ||||||||||||||||| || || || |||||||| | Sbjct: 1866 ctgcaacagctgtgtactc-attgaagtactgaggaactgagatccccatgaagaaagca 1808 Query: 462 aagcccaggatgaacttggtcctgaagctgtt 493 || |||| |||||| ||||||||||||||||| Sbjct: 1807 aaacccaagatgaatttggtcctgaagctgtt 1776
>ref|XM_506662.1| PREDICTED Oryza sativa (japonica cultivar-group), P0027G10.52 mRNA Length = 2682 Score = 159 bits (80), Expect = 1e-35 Identities = 269/332 (81%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 162 ggaagaacttgttgaggttgaagggcagggagtagaactcctcgctcctggcgtccttct 221 ||||||||||||| || ||||| || | |||||||| || |||||||| ||||| |||| Sbjct: 2383 ggaagaacttgttcagattgaacggtaacgagtagaattcttcgctcctcgcgtctttct 2324 Query: 222 tgaagctcctgaacttgtcccaccagtggtaccctctgtccttcctcaccgngctctggt 281 ||||||||||||| ||||||||||| ||||| ||||| ||||||||||||| | | | || Sbjct: 2323 tgaagctcctgaatttgtcccaccaatggtagcctctatccttcctcaccgtgttattgt 2264 Query: 282 gcaggtgcatcgtgttgtccaggaagtaggccaccagccccgccacgaacggnttgttcg 341 || | ||||||||||| |||||||||||||| || ||||| || ||||| || || Sbjct: 2263 gcgtctcgatcgtgttgtcgaggaagtaggccacaagacccgcgacaaacggcttcgacg 2204 Query: 342 agaagggcacgttgatcatgtngttgaaccatctagcgcccgtgtgcaccgggccatggc 401 |||| |||||||| ||||| | ||||||||||| || || |||||||| || |||| | Sbjct: 2203 agaacggcacgtttatcatatcattgaaccatctggcaccagtgtgcactggtccataac 2144 Query: 402 ccgagacggaggcgtactctnttgaagtactgaggaaccgatatgccgatgaagaaggag 461 | | || | | |||||| ||||||||||||||||| || || || |||||||| | Sbjct: 2143 ctgcaacagctgtgtactc-attgaagtactgaggaactgagatccccatgaagaaagca 2085 Query: 462 aagcccaggatgaacttggtcctgaagctgtt 493 || |||| |||||| ||||||||||||||||| Sbjct: 2084 aaacccaagatgaatttggtcctgaagctgtt 2053
>dbj|AK121778.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093F12, full insert sequence Length = 2682 Score = 159 bits (80), Expect = 1e-35 Identities = 269/332 (81%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 162 ggaagaacttgttgaggttgaagggcagggagtagaactcctcgctcctggcgtccttct 221 ||||||||||||| || ||||| || | |||||||| || |||||||| ||||| |||| Sbjct: 2383 ggaagaacttgttcagattgaacggtaacgagtagaattcttcgctcctcgcgtctttct 2324 Query: 222 tgaagctcctgaacttgtcccaccagtggtaccctctgtccttcctcaccgngctctggt 281 ||||||||||||| ||||||||||| ||||| ||||| ||||||||||||| ||| | || Sbjct: 2323 tgaagctcctgaatttgtcccaccaatggtagcctctatccttcctcaccgtgctattgt 2264 Query: 282 gcaggtgcatcgtgttgtccaggaagtaggccaccagccccgccacgaacggnttgttcg 341 || | ||||||| ||| |||||||||||||| || ||||| || ||||| || || Sbjct: 2263 gcgtctcgatcgtgtcgtcgaggaagtaggccacaagacccgcgacaaacggttttgacg 2204 Query: 342 agaagggcacgttgatcatgtngttgaaccatctagcgcccgtgtgcaccgggccatggc 401 |||| |||||||| ||||| | ||||||||||| || || |||||||| || |||| | Sbjct: 2203 agaacggcacgtttatcatatcattgaaccatctggcaccagtgtgcactggtccataac 2144 Query: 402 ccgagacggaggcgtactctnttgaagtactgaggaaccgatatgccgatgaagaaggag 461 | | || | | |||||| ||||||||||||||||| || || || |||||||| | Sbjct: 2143 ctgcaacagctgtgtactc-attgaagtactgaggaactgagatccccatgaagaaagca 2085 Query: 462 aagcccaggatgaacttggtcctgaagctgtt 493 || |||| |||||| ||||||||||||||||| Sbjct: 2084 aaacccaagatgaatttggtcctgaagctgtt 2053
>dbj|AK064905.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000L20, full insert sequence Length = 2391 Score = 159 bits (80), Expect = 1e-35 Identities = 269/332 (81%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 162 ggaagaacttgttgaggttgaagggcagggagtagaactcctcgctcctggcgtccttct 221 ||||||||||||| || ||||| || | |||||||| || |||||||| ||||| |||| Sbjct: 2106 ggaagaacttgttcagattgaacggtaacgagtagaattcttcgctcctcgcgtctttct 2047 Query: 222 tgaagctcctgaacttgtcccaccagtggtaccctctgtccttcctcaccgngctctggt 281 ||||||||||||| ||||||||||| ||||| ||||| ||||||||||||| | | | || Sbjct: 2046 tgaagctcctgaatttgtcccaccaatggtagcctctatccttcctcaccgtgttattgt 1987 Query: 282 gcaggtgcatcgtgttgtccaggaagtaggccaccagccccgccacgaacggnttgttcg 341 || | ||||||||||| |||||||||||||| || ||||| || ||||| || || Sbjct: 1986 gcgtctcgatcgtgttgtcgaggaagtaggccacaagacccgcgacaaacggcttcgacg 1927 Query: 342 agaagggcacgttgatcatgtngttgaaccatctagcgcccgtgtgcaccgggccatggc 401 |||| |||||||| ||||| | ||||||||||| || || |||||||| || |||| | Sbjct: 1926 agaacggcacgtttatcatatcattgaaccatctggcaccagtgtgcactggtccataac 1867 Query: 402 ccgagacggaggcgtactctnttgaagtactgaggaaccgatatgccgatgaagaaggag 461 | | || | | |||||| ||||||||||||||||| || || || |||||||| | Sbjct: 1866 ctgcaacagccgtgtactc-attgaagtactgaggaactgagatccccatgaagaaagca 1808 Query: 462 aagcccaggatgaacttggtcctgaagctgtt 493 || |||| |||||| ||||||||||||||||| Sbjct: 1807 aaacccaagatgaatttggtcctgaagctgtt 1776
>dbj|AK061792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-F05, full insert sequence Length = 993 Score = 159 bits (80), Expect = 1e-35 Identities = 269/332 (81%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 162 ggaagaacttgttgaggttgaagggcagggagtagaactcctcgctcctggcgtccttct 221 ||||||||||||| || ||||| || | |||||||| || |||||||| ||||| |||| Sbjct: 772 ggaagaacttgttcagattgaacggtaacgagtagaattcttcgctcctcgcgtctttct 713 Query: 222 tgaagctcctgaacttgtcccaccagtggtaccctctgtccttcctcaccgngctctggt 281 ||||||||||||| ||||||||||| ||||| ||||| ||||||||||||| | | | || Sbjct: 712 tgaagctcctgaatttgtcccaccaatggtagcctctatccttcctcaccgtgttattgt 653 Query: 282 gcaggtgcatcgtgttgtccaggaagtaggccaccagccccgccacgaacggnttgttcg 341 || | ||||||||||| |||||||||||||| || ||||| || ||||| || || Sbjct: 652 gcgtctcgatcgtgttgtcgaggaagtaggccacaagacccgcgacaaacggcttcgacg 593 Query: 342 agaagggcacgttgatcatgtngttgaaccatctagcgcccgtgtgcaccgggccatggc 401 |||| |||||||| ||||| | ||||||||||| || || |||||||| || |||| | Sbjct: 592 agaacggcacgtttatcatatcattgaaccatctggcaccagtgtgcactggtccataac 533 Query: 402 ccgagacggaggcgtactctnttgaagtactgaggaaccgatatgccgatgaagaaggag 461 | | || | | |||||| ||||||||||||||||| || || || |||||||| | Sbjct: 532 ctgcaacagctgtgtactc-attgaagtactgaggaactgagatccccatgaagaaagca 474 Query: 462 aagcccaggatgaacttggtcctgaagctgtt 493 || |||| |||||| ||||||||||||||||| Sbjct: 473 aaacccaagatgaatttggtcctgaagctgtt 442
>ref|XM_482444.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2104 Score = 135 bits (68), Expect = 2e-28 Identities = 109/123 (88%) Strand = Plus / Minus Query: 149 gatcagaccgaanggaagaacttgttgaggttgaagggcagggagtagaactcctcgctc 208 ||||| || ||| ||||||||||||| | |||||| ||||| |||||||||||||||||| Sbjct: 1778 gatcacacggaagggaagaacttgttcaagttgaacggcagagagtagaactcctcgctc 1719 Query: 209 ctggcgtccttcttgaagctcctgaacttgtcccaccagtggtaccctctgtccttcctc 268 | || |||| |||||||||||||||||||||||||||||||||| || ||||| ||||| Sbjct: 1718 cgggtgtccgtcttgaagctcctgaacttgtcccaccagtggtatcccctgtctctcctc 1659 Query: 269 acc 271 ||| Sbjct: 1658 acc 1656 Score = 95.6 bits (48), Expect = 1e-16 Identities = 163/201 (81%), Gaps = 1/201 (0%) Strand = Plus / Minus Query: 293 gtgttgtccaggaagtaggccaccagccccgccacgaacggnttgttcgagaagggcacg 352 |||||||| |||||||| || | ||||| || |||||||| || || |||||| || Sbjct: 1634 gtgttgtctaggaagtacgcaatgagccctgcgacgaacggctttgacgcgaagggtaca 1575 Query: 353 ttgatcatgtngttgaaccatctagcgcccgtgtgcaccgggccatggcccgagacggag 412 || ||||||| |||||||||| |||||| |||||||| || |||| || | || || Sbjct: 1574 tttatcatgtcattgaaccatcgagcgccggtgtgcactggaccataaccggcaaccgat 1515 Query: 413 gcgtactctnttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccaggat 472 | ||||| |||||||||||||||||||||| ||| |||||||| ||||| |||| || Sbjct: 1514 gtatactc-gttgaagtactgaggaaccgataagcccatgaagaacgagaaccccacaat 1456 Query: 473 gaacttggtcctgaagctgtt 493 ||||||||||||||||||||| Sbjct: 1455 gaacttggtcctgaagctgtt 1435
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 135 bits (68), Expect = 2e-28 Identities = 109/123 (88%) Strand = Plus / Minus Query: 149 gatcagaccgaanggaagaacttgttgaggttgaagggcagggagtagaactcctcgctc 208 ||||| || ||| ||||||||||||| | |||||| ||||| |||||||||||||||||| Sbjct: 20126100 gatcacacggaagggaagaacttgttcaagttgaacggcagagagtagaactcctcgctc 20126041 Query: 209 ctggcgtccttcttgaagctcctgaacttgtcccaccagtggtaccctctgtccttcctc 268 | || |||| |||||||||||||||||||||||||||||||||| || ||||| ||||| Sbjct: 20126040 cgggtgtccgtcttgaagctcctgaacttgtcccaccagtggtatcccctgtctctcctc 20125981 Query: 269 acc 271 ||| Sbjct: 20125980 acc 20125978 Score = 93.7 bits (47), Expect = 5e-16 Identities = 65/71 (91%) Strand = Plus / Minus Query: 423 ttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccaggatgaacttggtc 482 |||||||||||||||||||||| ||| |||||||| ||||| |||| |||||||||||| Sbjct: 20125725 ttgaagtactgaggaaccgataagcccatgaagaacgagaaccccacaatgaacttggtc 20125666 Query: 483 ctgaagctgtt 493 ||||||||||| Sbjct: 20125665 ctgaagctgtt 20125655 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 162 ggaagaacttgttgaggttgaagggcagggagtagaactcctc 204 |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 17188296 ggaagaaccggttgaggttgaagggcagggtgtagaactcctc 17188254
>dbj|AP004005.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1188_F05 Length = 117045 Score = 135 bits (68), Expect = 2e-28 Identities = 109/123 (88%) Strand = Plus / Minus Query: 149 gatcagaccgaanggaagaacttgttgaggttgaagggcagggagtagaactcctcgctc 208 ||||| || ||| ||||||||||||| | |||||| ||||| |||||||||||||||||| Sbjct: 72646 gatcacacggaagggaagaacttgttcaagttgaacggcagagagtagaactcctcgctc 72587 Query: 209 ctggcgtccttcttgaagctcctgaacttgtcccaccagtggtaccctctgtccttcctc 268 | || |||| |||||||||||||||||||||||||||||||||| || ||||| ||||| Sbjct: 72586 cgggtgtccgtcttgaagctcctgaacttgtcccaccagtggtatcccctgtctctcctc 72527 Query: 269 acc 271 ||| Sbjct: 72526 acc 72524 Score = 93.7 bits (47), Expect = 5e-16 Identities = 65/71 (91%) Strand = Plus / Minus Query: 423 ttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccaggatgaacttggtc 482 |||||||||||||||||||||| ||| |||||||| ||||| |||| |||||||||||| Sbjct: 72271 ttgaagtactgaggaaccgataagcccatgaagaacgagaaccccacaatgaacttggtc 72212 Query: 483 ctgaagctgtt 493 ||||||||||| Sbjct: 72211 ctgaagctgtt 72201
>dbj|AK073563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041K18, full insert sequence Length = 2104 Score = 135 bits (68), Expect = 2e-28 Identities = 109/123 (88%) Strand = Plus / Minus Query: 149 gatcagaccgaanggaagaacttgttgaggttgaagggcagggagtagaactcctcgctc 208 ||||| || ||| ||||||||||||| | |||||| ||||| |||||||||||||||||| Sbjct: 1778 gatcacacggaagggaagaacttgttcaagttgaacggcagagagtagaactcctcgctc 1719 Query: 209 ctggcgtccttcttgaagctcctgaacttgtcccaccagtggtaccctctgtccttcctc 268 | || |||| |||||||||||||||||||||||||||||||||| || ||||| ||||| Sbjct: 1718 cgggtgtccgtcttgaagctcctgaacttgtcccaccagtggtatcccctgtctctcctc 1659 Query: 269 acc 271 ||| Sbjct: 1658 acc 1656 Score = 93.7 bits (47), Expect = 5e-16 Identities = 65/71 (91%) Strand = Plus / Minus Query: 423 ttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccaggatgaacttggtc 482 |||||||||||||||||||||| ||| |||||||| ||||| |||| |||||||||||| Sbjct: 1505 ttgaagtactgaggaaccgataagcccatgaagaacgagaaccccacaatgaacttggtc 1446 Query: 483 ctgaagctgtt 493 ||||||||||| Sbjct: 1445 ctgaagctgtt 1435
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 129 bits (65), Expect = 9e-27 Identities = 165/199 (82%) Strand = Plus / Minus Query: 162 ggaagaacttgttgaggttgaagggcagggagtagaactcctcgctcctggcgtccttct 221 ||||||||||||| || ||||| || | |||||||| || |||||||| ||||| |||| Sbjct: 12834474 ggaagaacttgttcagattgaacggtaacgagtagaattcttcgctcctcgcgtctttct 12834415 Query: 222 tgaagctcctgaacttgtcccaccagtggtaccctctgtccttcctcaccgngctctggt 281 ||||||||||||| ||||||||||| ||||| ||||| ||||||||||||| | | | || Sbjct: 12834414 tgaagctcctgaatttgtcccaccaatggtagcctctatccttcctcaccgtgttattgt 12834355 Query: 282 gcaggtgcatcgtgttgtccaggaagtaggccaccagccccgccacgaacggnttgttcg 341 || | ||||||||||| |||||||||||||| || ||||| || ||||| || || Sbjct: 12834354 gcgtctcgatcgtgttgtcgaggaagtaggccacaagacccgcgacaaacggcttcgacg 12834295 Query: 342 agaagggcacgttgatcat 360 |||| |||||||| ||||| Sbjct: 12834294 agaacggcacgtttatcat 12834276 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 423 ttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccaggatgaacttggtc 482 ||||||||||||||||| || || || |||||||| | || |||| |||||| |||||| Sbjct: 12834108 ttgaagtactgaggaactgagatccccatgaagaaagcaaaacccaagatgaatttggtc 12834049 Query: 483 ctgaagctgtt 493 ||||||||||| Sbjct: 12834048 ctgaagctgtt 12834038 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Minus Query: 162 ggaagaacttgttgaggttgaagggcagggagtagaactc 201 |||||||| | ||||||||||| ||||||| ||||||||| Sbjct: 9158536 ggaagaacctattgaggttgaatggcagggtgtagaactc 9158497
>dbj|AP005702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0027G10 Length = 184759 Score = 129 bits (65), Expect = 9e-27 Identities = 165/199 (82%) Strand = Plus / Minus Query: 162 ggaagaacttgttgaggttgaagggcagggagtagaactcctcgctcctggcgtccttct 221 ||||||||||||| || ||||| || | |||||||| || |||||||| ||||| |||| Sbjct: 142251 ggaagaacttgttcagattgaacggtaacgagtagaattcttcgctcctcgcgtctttct 142192 Query: 222 tgaagctcctgaacttgtcccaccagtggtaccctctgtccttcctcaccgngctctggt 281 ||||||||||||| ||||||||||| ||||| ||||| ||||||||||||| | | | || Sbjct: 142191 tgaagctcctgaatttgtcccaccaatggtagcctctatccttcctcaccgtgttattgt 142132 Query: 282 gcaggtgcatcgtgttgtccaggaagtaggccaccagccccgccacgaacggnttgttcg 341 || | ||||||||||| |||||||||||||| || ||||| || ||||| || || Sbjct: 142131 gcgtctcgatcgtgttgtcgaggaagtaggccacaagacccgcgacaaacggcttcgacg 142072 Query: 342 agaagggcacgttgatcat 360 |||| |||||||| ||||| Sbjct: 142071 agaacggcacgtttatcat 142053 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 423 ttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccaggatgaacttggtc 482 ||||||||||||||||| || || || |||||||| | || |||| |||||| |||||| Sbjct: 141885 ttgaagtactgaggaactgagatccccatgaagaaagcaaaacccaagatgaatttggtc 141826 Query: 483 ctgaagctgtt 493 ||||||||||| Sbjct: 141825 ctgaagctgtt 141815
>ref|NM_185153.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1590 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 162 ggaagaacttgttgaggttgaagggcagggagtagaactcctcgct 207 |||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 1579 ggaagaacttgttgaggttgaaaggcagagagtagaactcctcgct 1534
>ref|XM_463430.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1575 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 172 gttgaggttgaagggcagggagtagaactcctcgctcctggcgtcc 217 ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1554 gttgaggttgaagggcaggctgtagaactcctcgctcctggcgtcc 1509
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 162 ggaagaacttgttgaggttgaagggcagggagtagaactcctcgct 207 |||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 34293824 ggaagaacttgttgaggttgaaaggcagagagtagaactcctcgct 34293869 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 185 ggcagggagtagaactcctcgctcct 210 ||||| |||||||||||||||||||| Sbjct: 27524104 ggcagagagtagaactcctcgctcct 27524079
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 162 ggaagaacttgttgaggttgaagggcagggagtagaactcctcgct 207 |||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 34384296 ggaagaacttgttgaggttgaaaggcagagagtagaactcctcgct 34384341 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 185 ggcagggagtagaactcctcgctcct 210 ||||| |||||||||||||||||||| Sbjct: 27615427 ggcagagagtagaactcctcgctcct 27615402
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 172 gttgaggttgaagggcagggagtagaactcctcgctcctggcgtcc 217 ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 31973155 gttgaggttgaagggcaggctgtagaactcctcgctcctggcgtcc 31973110
>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0512C01 Length = 176261 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 172 gttgaggttgaagggcagggagtagaactcctcgctcctggcgtcc 217 ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 14969 gttgaggttgaagggcaggctgtagaactcctcgctcctggcgtcc 14924
>gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genomic sequence, complete sequence Length = 143205 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 162 ggaagaacttgttgaggttgaagggcagggagtagaactcctcgct 207 |||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 41174 ggaagaacttgttgaggttgaaaggcagagagtagaactcctcgct 41129
>gb|AF463847.1| Oryza sativa (japonica cultivar-group) transgenic plant p0719 integrated T-DNA(Ds), flanking sequence Length = 693 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 162 ggaagaacttgttgaggttgaagggcagggagtagaactcctcgct 207 |||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 377 ggaagaacttgttgaggttgaaaggcagagagtagaactcctcgct 422
>dbj|AK103020.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116O12, full insert sequence Length = 1481 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 172 gttgaggttgaagggcagggagtagaactcctcgctcctggcgtcc 217 ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1327 gttgaggttgaagggcaggctgtagaactcctcgctcctggcgtcc 1282
>dbj|AK071234.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086K11, full insert sequence Length = 2014 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 162 ggaagaacttgttgaggttgaagggcagggagtagaactcctcgct 207 |||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 1771 ggaagaacttgttgaggttgaaaggcagagagtagaactcctcgct 1726
>dbj|AK058223.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-G04, full insert sequence Length = 996 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 162 ggaagaacttgttgaggttgaagggcagggagtagaactcctcgct 207 |||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 741 ggaagaacttgttgaggttgaaaggcagagagtagaactcctcgct 696
>gb|AY110021.1| Zea mays CL23380_1 mRNA sequence Length = 737 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 162 ggaagaacttgttgaggttgaagggcagggagtagaactcctcgct 207 |||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 427 ggaagaacttgttgaggttgaatgggagggagtagaactcctcgct 382 Score = 44.1 bits (22), Expect = 0.43 Identities = 42/49 (85%) Strand = Plus / Minus Query: 349 cacgttgatcatgtngttgaaccatctagcgcccgtgtgcaccgggcca 397 |||||||| ||| | |||||||||||| || | |||||| ||||||||| Sbjct: 240 cacgttgaccatatcgttgaaccatcttgcacgcgtgtgtaccgggcca 192
>dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460E08 Length = 170021 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 172 gttgaggttgaagggcagggagtagaactcctcgctcctggcgtcc 217 ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 69882 gttgaggttgaagggcaggctgtagaactcctcgctcctggcgtcc 69837
>ref|XM_467723.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2124 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 162 ggaagaacttgttgaggttgaagggcagggagtagaactcctcgct 207 ||||||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 1874 ggaagaacttgttcaggttgaacggcagggaatagaactcctcgct 1829 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Minus Query: 423 ttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccaggatgaacttggtc 482 ||||||||||||||||| || | ||| || || | ||||| || ||||||||||||||| Sbjct: 1614 ttgaagtactgaggaacagaaaggcccataaaaactgagaacccgaggatgaacttggtc 1555 Query: 483 ctgaa 487 ||||| Sbjct: 1554 ctgaa 1550
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 162 ggaagaacttgttgaggttgaagggcagggagtagaactcctcgct 207 ||||||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 31065007 ggaagaacttgttcaggttgaacggcagggaatagaactcctcgct 31065052 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 423 ttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccaggatgaacttggtc 482 ||||||||||||||||| || | ||| || || | ||||| || ||||||||||||||| Sbjct: 31065358 ttgaagtactgaggaacagaaaggcccataaaaactgagaacccgaggatgaacttggtc 31065417 Query: 483 ctgaa 487 ||||| Sbjct: 31065418 ctgaa 31065422
>dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516G10 Length = 148937 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 162 ggaagaacttgttgaggttgaagggcagggagtagaactcctcgct 207 ||||||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 119963 ggaagaacttgttcaggttgaacggcagggaatagaactcctcgct 120008 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 423 ttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccaggatgaacttggtc 482 ||||||||||||||||| || | ||| || || | ||||| || ||||||||||||||| Sbjct: 120314 ttgaagtactgaggaacagaaaggcccataaaaactgagaacccgaggatgaacttggtc 120373 Query: 483 ctgaa 487 ||||| Sbjct: 120374 ctgaa 120378
>dbj|AP004800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0585G03 Length = 173649 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 162 ggaagaacttgttgaggttgaagggcagggagtagaactcctcgct 207 ||||||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 54231 ggaagaacttgttcaggttgaacggcagggaatagaactcctcgct 54276 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 423 ttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccaggatgaacttggtc 482 ||||||||||||||||| || | ||| || || | ||||| || ||||||||||||||| Sbjct: 54582 ttgaagtactgaggaacagaaaggcccataaaaactgagaacccgaggatgaacttggtc 54641 Query: 483 ctgaa 487 ||||| Sbjct: 54642 ctgaa 54646
>dbj|AK073562.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042I18, full insert sequence Length = 2125 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 162 ggaagaacttgttgaggttgaagggcagggagtagaactcctcgct 207 ||||||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 1874 ggaagaacttgttcaggttgaacggcagggaatagaactcctcgct 1829 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Minus Query: 423 ttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccaggatgaacttggtc 482 ||||||||||||||||| || | ||| || || | ||||| || ||||||||||||||| Sbjct: 1614 ttgaagtactgaggaacagaaaggcccataaaaactgagaacccgaggatgaacttggtc 1555 Query: 483 ctgaa 487 ||||| Sbjct: 1554 ctgaa 1550
>emb|AM234723.1| Oryza sativa (japonica cultivar-group) mRNA for root uracil permease 1 (rup1 gene) Length = 1973 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 162 ggaagaacttgttgaggttgaagggcagggagtagaactcctcgct 207 ||||||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 1787 ggaagaacttgttcaggttgaacggcagggaatagaactcctcgct 1742 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Minus Query: 423 ttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccaggatgaacttggtc 482 ||||||||||||||||| || | ||| || || | ||||| || ||||||||||||||| Sbjct: 1527 ttgaagtactgaggaacagaaaggcccataaaaactgagaacccgaggatgaacttggtc 1468 Query: 483 ctgaa 487 ||||| Sbjct: 1467 ctgaa 1463
>ref|XM_482013.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1575 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 162 ggaagaacttgttgaggttgaagggcagggagtagaactcctc 204 |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 1564 ggaagaaccggttgaggttgaagggcagggtgtagaactcctc 1522
>dbj|AP005389.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091C18 Length = 154416 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 162 ggaagaacttgttgaggttgaagggcagggagtagaactcctc 204 |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 112151 ggaagaaccggttgaggttgaagggcagggtgtagaactcctc 112109
>dbj|AP005298.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1770_H03 Length = 189893 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 162 ggaagaacttgttgaggttgaagggcagggagtagaactcctc 204 |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 48921 ggaagaaccggttgaggttgaagggcagggtgtagaactcctc 48879
>dbj|AK106407.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-H04, full insert sequence Length = 1360 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 162 ggaagaacttgttgaggttgaagggcagggagtagaactcctc 204 |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 1035 ggaagaaccggttgaggttgaagggcagggtgtagaactcctc 993
>gb|AY104873.1| Zea mays PCO115429 mRNA sequence Length = 2063 Score = 60.0 bits (30), Expect = 7e-06 Identities = 50/57 (87%) Strand = Plus / Minus Query: 151 tcagaccgaanggaagaacttgttgaggttgaagggcagggagtagaactcctcgct 207 ||||||||| |||||||||| || || ||||| |||||||| |||||||||||||| Sbjct: 1878 tcagaccgatgggaagaacttattcagattgaatggcagggaatagaactcctcgct 1822 Score = 46.1 bits (23), Expect = 0.11 Identities = 59/71 (83%) Strand = Plus / Minus Query: 423 ttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccaggatgaacttggtc 482 |||||||| |||||||| || | ||| ||||| | ||||| || ||||||||||||||| Sbjct: 1607 ttgaagtattgaggaacagaaaggcccatgaaaactgagaacccaaggatgaacttggtc 1548 Query: 483 ctgaagctgtt 493 || ||| |||| Sbjct: 1547 ctaaaggtgtt 1537
>ref|NM_124378.4| Arabidopsis thaliana permease AT5G49990 mRNA, complete cds Length = 1905 Score = 50.1 bits (25), Expect = 0.007 Identities = 33/36 (91%) Strand = Plus / Minus Query: 340 cgagaagggcacgttgatcatgtngttgaaccatct 375 |||||||||||| |||| ||||| |||||||||||| Sbjct: 1493 cgagaagggcacattgaccatgtcgttgaaccatct 1458
>gb|AC160095.1| Lycopersicon esculentum chromosome 0 clone BB-BA4 map MAP_LOC, complete sequence Length = 121127 Score = 50.1 bits (25), Expect = 0.007 Identities = 79/97 (81%) Strand = Plus / Minus Query: 168 acttgttgaggttgaagggcagggagtagaactcctcgctcctggcgtccttcttgaagc 227 ||||||| || ||||| || ||||||||||| ||||| || || | ||| |||||||| Sbjct: 33793 acttgttcagattgaaagggagggagtagaattcctcacttctcgtgtcagtcttgaagg 33734 Query: 228 tcctgaacttgtcccaccagtggtaccctctgtcctt 264 | |||| |||||||||||||| | ||||||||||| Sbjct: 33733 acttgaatttgtcccaccagtgcttgcctctgtcctt 33697
>gb|BT008887.1| Arabidopsis thaliana At5g49990 mRNA, complete cds Length = 1587 Score = 50.1 bits (25), Expect = 0.007 Identities = 33/36 (91%) Strand = Plus / Minus Query: 340 cgagaagggcacgttgatcatgtngttgaaccatct 375 |||||||||||| |||| ||||| |||||||||||| Sbjct: 1398 cgagaagggcacattgaccatgtcgttgaaccatct 1363
>gb|AY093137.1| Arabidopsis thaliana permease (At5g49990) mRNA, complete cds Length = 1799 Score = 50.1 bits (25), Expect = 0.007 Identities = 33/36 (91%) Strand = Plus / Minus Query: 340 cgagaagggcacgttgatcatgtngttgaaccatct 375 |||||||||||| |||| ||||| |||||||||||| Sbjct: 1424 cgagaagggcacattgaccatgtcgttgaaccatct 1389
>gb|AY796114.1| Lycopersicon esculentum clone Le_HBa 153G23 putative transposase, putative BAH domain-containing protein, putative permease I, putative pollen specific LIM domain-containing protein, putative betaine aldehyde dehyrogenase, EDS1, and putative ribosomal-protein S6 kinase-like protein genes, complete cds Length = 121127 Score = 50.1 bits (25), Expect = 0.007 Identities = 79/97 (81%) Strand = Plus / Minus Query: 168 acttgttgaggttgaagggcagggagtagaactcctcgctcctggcgtccttcttgaagc 227 ||||||| || ||||| || ||||||||||| ||||| || || | ||| |||||||| Sbjct: 33793 acttgttcagattgaaagggagggagtagaattcctcacttctcgtgtcagtcttgaagg 33734 Query: 228 tcctgaacttgtcccaccagtggtaccctctgtcctt 264 | |||| |||||||||||||| | ||||||||||| Sbjct: 33733 acttgaatttgtcccaccagtgcttgcctctgtcctt 33697
>dbj|AB024032.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9P8 Length = 70670 Score = 50.1 bits (25), Expect = 0.007 Identities = 33/36 (91%) Strand = Plus / Plus Query: 340 cgagaagggcacgttgatcatgtngttgaaccatct 375 |||||||||||| |||| ||||| |||||||||||| Sbjct: 68013 cgagaagggcacattgaccatgtcgttgaaccatct 68048
>ref|NM_180920.2| Arabidopsis thaliana permease AT5G62890 transcript variant AT5G62890.1 mRNA, complete cds Length = 2084 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 470 gatgaacttggtcctgaagctgtt 493 |||||||||||||||||||||||| Sbjct: 1464 gatgaacttggtcctgaagctgtt 1441
>ref|NM_125683.2| Arabidopsis thaliana permease AT5G62890 transcript variant AT5G62890.2 mRNA, complete cds Length = 2044 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 470 gatgaacttggtcctgaagctgtt 493 |||||||||||||||||||||||| Sbjct: 1424 gatgaacttggtcctgaagctgtt 1401
>ref|NM_001037050.1| Arabidopsis thaliana permease AT5G62890 transcript variant AT5G62890.3 mRNA, complete cds Length = 1841 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 470 gatgaacttggtcctgaagctgtt 493 |||||||||||||||||||||||| Sbjct: 1597 gatgaacttggtcctgaagctgtt 1574
>gb|AY035003.1| Arabidopsis thaliana putative permease 1 (At5g62890) mRNA, partial cds Length = 1389 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 470 gatgaacttggtcctgaagctgtt 493 |||||||||||||||||||||||| Sbjct: 765 gatgaacttggtcctgaagctgtt 742
>gb|AF466824.1| Arabidopsis thaliana clone GBGe55 putative permease 1 mRNA, partial cds Length = 965 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 470 gatgaacttggtcctgaagctgtt 493 |||||||||||||||||||||||| Sbjct: 334 gatgaacttggtcctgaagctgtt 311
>gb|AF466198.1| Arabidopsis thaliana putative permease 1 (MQB2.21) mRNA, complete cds Length = 2059 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 470 gatgaacttggtcctgaagctgtt 493 |||||||||||||||||||||||| Sbjct: 1431 gatgaacttggtcctgaagctgtt 1408
>emb|BX830950.1|CNS09YMG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS41ZA01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1872 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 470 gatgaacttggtcctgaagctgtt 493 |||||||||||||||||||||||| Sbjct: 1307 gatgaacttggtcctgaagctgtt 1284
>dbj|AP005767.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0035G04 Length = 155636 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Minus Query: 162 ggaagaacttgttgaggttgaagggcagggagtagaactc 201 |||||||| | ||||||||||| ||||||| ||||||||| Sbjct: 127983 ggaagaacctattgaggttgaatggcagggtgtagaactc 127944
>dbj|AB009053.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQB2 Length = 78145 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 470 gatgaacttggtcctgaagctgtt 493 |||||||||||||||||||||||| Sbjct: 61234 gatgaacttggtcctgaagctgtt 61211
>ref|NM_104695.3| Arabidopsis thaliana permease AT1G60030 mRNA, complete cds Length = 1941 Score = 46.1 bits (23), Expect = 0.11 Identities = 59/71 (83%) Strand = Plus / Minus Query: 423 ttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccaggatgaacttggtc 482 ||||||||||| || | ||||| ||| ||||||| ||||| || |||||||| || || Sbjct: 1543 ttgaagtactgtggtatcgataagcccatgaagaccgagaatccgaggatgaattttgtt 1484 Query: 483 ctgaagctgtt 493 ||||||||||| Sbjct: 1483 ctgaagctgtt 1473
>gb|BT013480.1| Lycopersicon esculentum clone 132163F, mRNA sequence Length = 2077 Score = 46.1 bits (23), Expect = 0.11 Identities = 65/79 (82%) Strand = Plus / Minus Query: 168 acttgttgaggttgaagggcagggagtagaactcctcgctcctggcgtccttcttgaagc 227 |||||||||| ||||| || ||||| ||||| ||||| || || | |||| ||||||| Sbjct: 1802 acttgttgagattgaatgggagggaatagaattcctcacttctcgtgtccgtcttgaaag 1743 Query: 228 tcctgaacttgtcccacca 246 | |||||||||||||||| Sbjct: 1742 acttgaacttgtcccacca 1724
>emb|BX813475.1|CNS0ADGW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB19ZG08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1866 Score = 46.1 bits (23), Expect = 0.11 Identities = 59/71 (83%) Strand = Plus / Minus Query: 423 ttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccaggatgaacttggtc 482 ||||||||||| || | ||||| ||| ||||||| ||||| || |||||||| || || Sbjct: 1540 ttgaagtactgtggtatcgataagcccatgaagaccgagaatccgaggatgaattttgtt 1481 Query: 483 ctgaagctgtt 493 ||||||||||| Sbjct: 1480 ctgaagctgtt 1470
>gb|AC005966.2|T2K10 Arabidopsis thaliana chromosome 1 BAC T2K10 sequence, complete sequence Length = 90284 Score = 46.1 bits (23), Expect = 0.11 Identities = 59/71 (83%) Strand = Plus / Plus Query: 423 ttgaagtactgaggaaccgatatgccgatgaagaaggagaagcccaggatgaacttggtc 482 ||||||||||| || | ||||| ||| ||||||| ||||| || |||||||| || || Sbjct: 42166 ttgaagtactgtggtatcgataagcccatgaagaccgagaatccgaggatgaattttgtt 42225 Query: 483 ctgaagctgtt 493 ||||||||||| Sbjct: 42226 ctgaagctgtt 42236
>ref|XM_469355.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1764 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 185 ggcagggagtagaactcctcgctcct 210 ||||| |||||||||||||||||||| Sbjct: 1592 ggcagagagtagaactcctcgctcct 1567
>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence, complete sequence Length = 123406 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 185 ggcagggagtagaactcctcgctcct 210 ||||| |||||||||||||||||||| Sbjct: 26410 ggcagagagtagaactcctcgctcct 26435
>dbj|AK110834.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-A10, full insert sequence Length = 1703 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 185 ggcagggagtagaactcctcgctcct 210 ||||| |||||||||||||||||||| Sbjct: 373 ggcagagagtagaactcctcgctcct 398
>dbj|AK100981.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144M20, full insert sequence Length = 1922 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 185 ggcagggagtagaactcctcgctcct 210 ||||| |||||||||||||||||||| Sbjct: 1633 ggcagagagtagaactcctcgctcct 1608
>ref|XM_509851.1| PREDICTED: Pan troglodytes similar to BCL-WEL (LOC452796), mRNA Length = 790 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 227 ctcctgaacttgtcccaccagtggt 251 |||||| |||||||||||||||||| Sbjct: 441 ctcctgcacttgtcccaccagtggt 417
>gb|BT019549.1| Homo sapiens BCL2-like 2 mRNA, complete cds Length = 582 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 227 ctcctgaacttgtcccaccagtggt 251 |||||| |||||||||||||||||| Sbjct: 372 ctcctgcacttgtcccaccagtggt 348
>gb|BT019548.1| Synthetic construct Homo sapiens BCL2-like 2 mRNA, partial cds Length = 582 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 227 ctcctgaacttgtcccaccagtggt 251 |||||| |||||||||||||||||| Sbjct: 372 ctcctgcacttgtcccaccagtggt 348
>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete sequence Length = 1783081 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 cttgttgaggttgaagggcag 189 ||||||||||||||||||||| Sbjct: 1514902 cttgttgaggttgaagggcag 1514882
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 297 tgtccaggaagtaggccacca 317 ||||||||||||||||||||| Sbjct: 4402948 tgtccaggaagtaggccacca 4402928
>ref|XM_570476.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CND05600) partial mRNA Length = 389 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 cttgttgaggttgaagggcag 189 ||||||||||||||||||||| Sbjct: 251 cttgttgaggttgaagggcag 231
>gb|BC011637.1| Homo sapiens mRNA similar to BCL2-like 2 (cDNA clone IMAGE:4106836) Length = 1250 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 227 ctcctgaacttgtcccaccagtggt 251 |||||| |||||||||||||||||| Sbjct: 537 ctcctgcacttgtcccaccagtggt 513
>ref|NM_004050.2| Homo sapiens BCL2-like 2 (BCL2L2), mRNA Length = 3542 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 227 ctcctgaacttgtcccaccagtggt 251 |||||| |||||||||||||||||| Sbjct: 548 ctcctgcacttgtcccaccagtggt 524
>gb|AY927500.1| Homo sapiens mRNA sequence Length = 672 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 227 ctcctgaacttgtcccaccagtggt 251 |||||| |||||||||||||||||| Sbjct: 147 ctcctgcacttgtcccaccagtggt 171
>gb|AY892894.1| Synthetic construct Homo sapiens clone FLH135020.01L BCL2-like 2 (BCL2L2) mRNA, partial cds Length = 582 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 227 ctcctgaacttgtcccaccagtggt 251 |||||| |||||||||||||||||| Sbjct: 372 ctcctgcacttgtcccaccagtggt 348
>gb|AY890433.1| Synthetic construct Homo sapiens clone FLH135024.01X BCL2-like 2 (BCL2L2) mRNA, complete cds Length = 582 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 227 ctcctgaacttgtcccaccagtggt 251 |||||| |||||||||||||||||| Sbjct: 372 ctcctgcacttgtcccaccagtggt 348
>gb|AY888229.1| Synthetic construct Homo sapiens clone FLH020218.01X BCL2-like 2 (BCL2L2) mRNA, complete cds Length = 582 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 227 ctcctgaacttgtcccaccagtggt 251 |||||| |||||||||||||||||| Sbjct: 372 ctcctgcacttgtcccaccagtggt 348
>gb|AY888228.1| Synthetic construct Homo sapiens clone FLH020217.01X BCL2-like 2 (BCL2L2) mRNA, complete cds Length = 582 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 227 ctcctgaacttgtcccaccagtggt 251 |||||| |||||||||||||||||| Sbjct: 372 ctcctgcacttgtcccaccagtggt 348
>gb|AY890819.1| Synthetic construct Homo sapiens clone FLH020213.01L BCL2-like 2 (BCL2L2) mRNA, partial cds Length = 582 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 227 ctcctgaacttgtcccaccagtggt 251 |||||| |||||||||||||||||| Sbjct: 372 ctcctgcacttgtcccaccagtggt 348
>dbj|D87461.1| Homo sapiens mRNA for KIAA0271 gene, partial cds Length = 3542 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 227 ctcctgaacttgtcccaccagtggt 251 |||||| |||||||||||||||||| Sbjct: 548 ctcctgcacttgtcccaccagtggt 524
>gb|BC104789.1| Homo sapiens BCL2-like 2, mRNA (cDNA clone MGC:132449 IMAGE:8143792), complete cds Length = 1579 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 227 ctcctgaacttgtcccaccagtggt 251 |||||| |||||||||||||||||| Sbjct: 537 ctcctgcacttgtcccaccagtggt 513
>emb|AL049829.4|CNS0000B Human chromosome 14 DNA sequence BAC R-124D2 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 196292 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 227 ctcctgaacttgtcccaccagtggt 251 |||||| |||||||||||||||||| Sbjct: 90197 ctcctgcacttgtcccaccagtggt 90173
>gb|U59747.1|HSU59747 Human Bcl-w (bcl-w) mRNA, complete cds Length = 582 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 227 ctcctgaacttgtcccaccagtggt 251 |||||| |||||||||||||||||| Sbjct: 372 ctcctgcacttgtcccaccagtggt 348
>ref|XM_510241.1| PREDICTED: Pan troglodytes similar to IFI27 protein (LOC453250), mRNA Length = 1028 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 agcccaggatgaacttggtc 482 |||||||||||||||||||| Sbjct: 817 agcccaggatgaacttggtc 798
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 gctctggtgcaggtgcatcg 293 |||||||||||||||||||| Sbjct: 6071500 gctctggtgcaggtgcatcg 6071519
>gb|AC116393.10| Mus musculus chromosome 15, clone RP23-94I16, complete sequence Length = 217156 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 tgtgcaccgggccatggccc 403 |||||||||||||||||||| Sbjct: 91520 tgtgcaccgggccatggccc 91539
>ref|XM_425873.1| PREDICTED: Gallus gallus similar to hypothetical protein FLJ10572 (LOC428313), mRNA Length = 2208 Score = 40.1 bits (20), Expect = 6.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 174 tgaggttgaagggcagggagtagaactcctcg 205 |||||| ||||||||| | ||||||||||||| Sbjct: 811 tgaggtggaagggcagcgtgtagaactcctcg 780
>ref|XM_456531.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0A04840g) partial mRNA Length = 1362 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 atcaagctagcaggaccatg 88 |||||||||||||||||||| Sbjct: 890 atcaagctagcaggaccatg 871
>gb|AC127580.3| Mus musculus BAC clone RP23-447P16 from chromosome 12, complete sequence Length = 175727 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 agaaggagaagcccaggatg 473 |||||||||||||||||||| Sbjct: 141407 agaaggagaagcccaggatg 141426
>ref|NM_005532.3| Homo sapiens interferon, alpha-inducible protein 27 (IFI27), mRNA Length = 656 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 agcccaggatgaacttggtc 482 |||||||||||||||||||| Sbjct: 439 agcccaggatgaacttggtc 420
>gb|AC122023.3| Mus musculus BAC clone RP24-372O13 from 12, complete sequence Length = 179947 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 agaaggagaagcccaggatg 473 |||||||||||||||||||| Sbjct: 1974 agaaggagaagcccaggatg 1993
>gb|BC015492.1| Homo sapiens interferon, alpha-inducible protein 27, mRNA (cDNA clone MGC:8967 IMAGE:3915505), complete cds Length = 729 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 agcccaggatgaacttggtc 482 |||||||||||||||||||| Sbjct: 504 agcccaggatgaacttggtc 485
>gb|BC052010.1| Mus musculus rhophilin, Rho GTPase binding protein 1, mRNA (cDNA clone MGC:62337 IMAGE:5717786), complete cds Length = 2301 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 tgtgcaccgggccatggccc 403 |||||||||||||||||||| Sbjct: 1052 tgtgcaccgggccatggccc 1071
>emb|AL354826.6| Human DNA sequence from clone RP11-286M16 on chromosome 1 Contains a novel gene, complete sequence Length = 203279 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 463 agcccaggatgaacttggtcctga 486 |||||||||||||||||| ||||| Sbjct: 113714 agcccaggatgaacttgggcctga 113737
>emb|AL121919.20|HSJ492J12 Human DNA sequence from clone RP3-492J12 on chromosome 20 Contains the C20orf174 gene for chromosome 20 open reading frame 174 and a CpG island, complete sequence Length = 129942 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 tgaacttggtcctgaagctg 491 |||||||||||||||||||| Sbjct: 115583 tgaacttggtcctgaagctg 115564
>gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0035B18, complete sequence Length = 123425 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 tatgccgatgaagaaggaga 462 |||||||||||||||||||| Sbjct: 11542 tatgccgatgaagaaggaga 11523
>emb|CR382133.1| Debaryomyces hansenii chromosome A of strain CBS767 of Debaryomyces hansenii Length = 1249565 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 atcaagctagcaggaccatg 88 |||||||||||||||||||| Sbjct: 382626 atcaagctagcaggaccatg 382607
>gb|BT007737.1| Synthetic construct Homo sapiens interferon, alpha-inducible protein 27 mRNA, partial cds Length = 360 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 agcccaggatgaacttggtc 482 |||||||||||||||||||| Sbjct: 316 agcccaggatgaacttggtc 297
>gb|BT006781.1| Homo sapiens interferon, alpha-inducible protein 27 mRNA, complete cds Length = 360 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 agcccaggatgaacttggtc 482 |||||||||||||||||||| Sbjct: 316 agcccaggatgaacttggtc 297
>emb|AL833682.1|HSM804995 Homo sapiens mRNA; cDNA DKFZp667G1522 (from clone DKFZp667G1522) Length = 5206 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 tgaacttggtcctgaagctg 491 |||||||||||||||||||| Sbjct: 3595 tgaacttggtcctgaagctg 3576
>emb|AJ843123.1| Plantago major partial mRNA for putative xanthine/uracil permease (xup1 gene) Length = 584 Score = 40.1 bits (20), Expect = 6.7 Identities = 31/35 (88%) Strand = Plus / Minus Query: 341 gagaagggcacgttgatcatgtngttgaaccatct 375 ||||| || ||||||| ||||| |||||||||||| Sbjct: 114 gagaatgggacgttgaccatgtcgttgaaccatct 80
>dbj|AK220431.1| Mus musculus mRNA for mKIAA1929 protein Length = 2030 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 tgtgcaccgggccatggccc 403 |||||||||||||||||||| Sbjct: 1010 tgtgcaccgggccatggccc 1029
>dbj|AK095039.1| Homo sapiens cDNA FLJ37720 fis, clone BRHIP2019149, moderately similar to Interferon, alpha-inducible protein 27 Length = 2431 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 agcccaggatgaacttggtc 482 |||||||||||||||||||| Sbjct: 2226 agcccaggatgaacttggtc 2207
>ref|NM_169522.1| Drosophila melanogaster CG8863-RE, transcript variant E (CG8863), mRNA Length = 1820 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 gagaagggcacgttgatcat 360 |||||||||||||||||||| Sbjct: 1061 gagaagggcacgttgatcat 1080
>ref|NM_169521.1| Drosophila melanogaster CG8863-RD, transcript variant D (CG8863), mRNA Length = 1868 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 gagaagggcacgttgatcat 360 |||||||||||||||||||| Sbjct: 1109 gagaagggcacgttgatcat 1128
>ref|NM_169520.1| Drosophila melanogaster CG8863-RC, transcript variant C (CG8863), mRNA Length = 1818 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 gagaagggcacgttgatcat 360 |||||||||||||||||||| Sbjct: 1059 gagaagggcacgttgatcat 1078
>ref|NM_169519.1| Drosophila melanogaster CG8863-RB, transcript variant B (CG8863), mRNA Length = 2051 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 gagaagggcacgttgatcat 360 |||||||||||||||||||| Sbjct: 1292 gagaagggcacgttgatcat 1311
>ref|NM_142026.2| Drosophila melanogaster CG8863-RA, transcript variant A (CG8863), mRNA Length = 1920 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 gagaagggcacgttgatcat 360 |||||||||||||||||||| Sbjct: 1161 gagaagggcacgttgatcat 1180
>dbj|AK143132.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130112L16 product:rhophilin, Rho GTPase binding protein 1, full insert sequence Length = 2608 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 tgtgcaccgggccatggccc 403 |||||||||||||||||||| Sbjct: 1064 tgtgcaccgggccatggccc 1083
>gb|AC079239.6| Homo sapiens BAC clone RP11-722M1 from 4, complete sequence Length = 182406 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 aacttgttgaggttgaaggg 186 |||||||||||||||||||| Sbjct: 45167 aacttgttgaggttgaaggg 45148
>ref|XM_940057.1| PREDICTED: Homo sapiens chromosome 20 open reading frame 174 (C20orf174), mRNA Length = 6323 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 tgaacttggtcctgaagctg 491 |||||||||||||||||||| Sbjct: 4728 tgaacttggtcctgaagctg 4709
>ref|XM_066058.4| PREDICTED: Homo sapiens chromosome 20 open reading frame 174 (C20orf174), mRNA Length = 6321 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 tgaacttggtcctgaagctg 491 |||||||||||||||||||| Sbjct: 4728 tgaacttggtcctgaagctg 4709
>gb|AY060982.1| Drosophila melanogaster GM13664 full length cDNA Length = 1859 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 gagaagggcacgttgatcat 360 |||||||||||||||||||| Sbjct: 1090 gagaagggcacgttgatcat 1109
>gb|AC008360.3|AC008360 Drosophila melanogaster, chromosome 3R, region 87E-87F, BAC clone BACR06H18, complete sequence Length = 194672 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 gagaagggcacgttgatcat 360 |||||||||||||||||||| Sbjct: 85661 gagaagggcacgttgatcat 85680
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 tatgccgatgaagaaggaga 462 |||||||||||||||||||| Sbjct: 1302056 tatgccgatgaagaaggaga 1302037
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 tatgccgatgaagaaggaga 462 |||||||||||||||||||| Sbjct: 1392747 tatgccgatgaagaaggaga 1392728
>gb|BC033155.1| Homo sapiens, Similar to chromosome 20 open reading frame 174, clone IMAGE:4139515, mRNA Length = 1962 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 tgaacttggtcctgaagctg 491 |||||||||||||||||||| Sbjct: 344 tgaacttggtcctgaagctg 325
>gb|AE004467.1| Pseudomonas aeruginosa PAO1, section 28 of 529 of the complete genome Length = 12795 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 gctctggtgcaggtgcatcg 293 |||||||||||||||||||| Sbjct: 10708 gctctggtgcaggtgcatcg 10689
>ref|XM_216954.3| PREDICTED: Rattus norvegicus rhophilin, Rho GTPase binding protein 1 (predicted) (Rhpn1_predicted), mRNA Length = 2868 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 tgtgcaccgggccatggccc 403 |||||||||||||||||||| Sbjct: 1800 tgtgcaccgggccatggccc 1819
>gb|AY891486.1| Synthetic construct Homo sapiens clone FLH012846.01L interferon alpha-inducible protein 27 (IFI27) mRNA, partial cds Length = 360 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 agcccaggatgaacttggtc 482 |||||||||||||||||||| Sbjct: 316 agcccaggatgaacttggtc 297
>gb|AY891485.1| Synthetic construct Homo sapiens clone FLH012845.01L interferon alpha-inducible protein 27 (IFI27) mRNA, partial cds Length = 360 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 agcccaggatgaacttggtc 482 |||||||||||||||||||| Sbjct: 316 agcccaggatgaacttggtc 297
>gb|AY888855.1| Synthetic construct Homo sapiens clone FLH012850.01X interferon alpha-inducible protein 27 (IFI27) mRNA, complete cds Length = 360 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 agcccaggatgaacttggtc 482 |||||||||||||||||||| Sbjct: 316 agcccaggatgaacttggtc 297
>gb|AY888854.1| Synthetic construct Homo sapiens clone FLH012849.01X interferon alpha-inducible protein 27 (IFI27) mRNA, complete cds Length = 360 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 agcccaggatgaacttggtc 482 |||||||||||||||||||| Sbjct: 316 agcccaggatgaacttggtc 297
>emb|BX647330.1|HSM807474 Homo sapiens mRNA; cDNA DKFZp686F05171 (from clone DKFZp686F05171) Length = 819 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 agcccaggatgaacttggtc 482 |||||||||||||||||||| Sbjct: 445 agcccaggatgaacttggtc 426
>gb|AY888570.1| Synthetic construct Homo sapiens clone FLH117452.01X interferon alpha-inducible protein 27 (IFI27) mRNA, complete cds Length = 369 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 agcccaggatgaacttggtc 482 |||||||||||||||||||| Sbjct: 325 agcccaggatgaacttggtc 306
>gb|AY891219.1| Synthetic construct Homo sapiens clone FLH117448.01L interferon alpha-inducible protein 27 (IFI27) mRNA, partial cds Length = 369 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 agcccaggatgaacttggtc 482 |||||||||||||||||||| Sbjct: 325 agcccaggatgaacttggtc 306
>gb|AY893755.1| Synthetic construct Homo sapiens clone FLH053969.01L interferon alpha-inducible protein 27 (IFI27) mRNA, partial cds Length = 369 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 agcccaggatgaacttggtc 482 |||||||||||||||||||| Sbjct: 325 agcccaggatgaacttggtc 306
>gb|AY893304.1| Synthetic construct Homo sapiens clone FLH053973.01X interferon alpha-inducible protein 27 (IFI27) mRNA, complete cds Length = 369 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 agcccaggatgaacttggtc 482 |||||||||||||||||||| Sbjct: 325 agcccaggatgaacttggtc 306
>dbj|AK059458.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-C06, full insert sequence Length = 1025 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 tatgccgatgaagaaggaga 462 |||||||||||||||||||| Sbjct: 247 tatgccgatgaagaaggaga 266
>tpe|BN000227.1|HSA000227 TPA: TPA_exp: Homo sapiens mRNA for putative ISG12(a) protein (ISG12(a) gene) Length = 672 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 agcccaggatgaacttggtc 482 |||||||||||||||||||| Sbjct: 445 agcccaggatgaacttggtc 426
>gb|AE003700.3| Drosophila melanogaster chromosome 3R, section 38 of 118 of the complete sequence Length = 228324 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 gagaagggcacgttgatcat 360 |||||||||||||||||||| Sbjct: 12162 gagaagggcacgttgatcat 12181
>emb|AL079302.7|CNS00M8S Human chromosome 14 DNA sequence BAC R-1089B7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 204230 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 agcccaggatgaacttggtc 482 |||||||||||||||||||| Sbjct: 201811 agcccaggatgaacttggtc 201792
>gb|U43194.1|MMU43194 Mus musculus rhophilin mRNA, complete cds Length = 1932 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 tgtgcaccgggccatggccc 403 |||||||||||||||||||| Sbjct: 987 tgtgcaccgggccatggccc 1006
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 tatgccgatgaagaaggaga 462 |||||||||||||||||||| Sbjct: 1390468 tatgccgatgaagaaggaga 1390449
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 tatgccgatgaagaaggaga 462 |||||||||||||||||||| Sbjct: 1302056 tatgccgatgaagaaggaga 1302037
>emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003_C01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157453 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 tatgccgatgaagaaggaga 462 |||||||||||||||||||| Sbjct: 127113 tatgccgatgaagaaggaga 127132
>ref|NM_008164.1| Mus musculus rhophilin, Rho GTPase binding protein 1 (Rhpn1), mRNA Length = 1932 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 tgtgcaccgggccatggccc 403 |||||||||||||||||||| Sbjct: 987 tgtgcaccgggccatggccc 1006
>gb|AC003923.1|AC003923 Drosophila melanogaster (P1 DS04219 (D36)) DNA sequence, complete sequence Length = 82393 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 gagaagggcacgttgatcat 360 |||||||||||||||||||| Sbjct: 62866 gagaagggcacgttgatcat 62847
>emb|AL121838.4|CNS01DSP Human chromosome 14 DNA sequence BAC C-2068J7 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 99679 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 agcccaggatgaacttggtc 482 |||||||||||||||||||| Sbjct: 5730 agcccaggatgaacttggtc 5711
>emb|X67325.1|HSP27 Homo sapiens mRNA for ISG12 protein Length = 597 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 agcccaggatgaacttggtc 482 |||||||||||||||||||| Sbjct: 379 agcccaggatgaacttggtc 360
>emb|AL713683.1|HSM803032 Homo sapiens mRNA; cDNA DKFZp667D092 (from clone DKFZp667D092) Length = 1936 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 tgaacttggtcctgaagctg 491 |||||||||||||||||||| Sbjct: 312 tgaacttggtcctgaagctg 293 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,103,804 Number of Sequences: 3902068 Number of extensions: 3103804 Number of successful extensions: 56037 Number of sequences better than 10.0: 136 Number of HSP's better than 10.0 without gapping: 140 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 55524 Number of HSP's gapped (non-prelim): 506 length of query: 493 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 471 effective length of database: 17,147,199,772 effective search space: 8076331092612 effective search space used: 8076331092612 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)