ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd27e09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 100 1e-17
2dbj|AK068042.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 1e-17
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 100 1e-17
4emb|BX649219.2|CNS09SBY Oryza sativa chromosome 12, . BAC B1097F... 100 1e-17
5ref|XM_701656.1| PREDICTED: Danio rerio similar to SET transloca... 46 0.15
6ref|XM_677799.1| PREDICTED: Danio rerio similar to SET transloca... 46 0.15
7ref|NM_201475.1| Danio rerio SET translocation (myeloid leukemia... 46 0.15
8emb|AL845526.25| Zebrafish DNA sequence from clone CH211-11P18 i... 46 0.15
9gb|BC046082.1| Danio rerio SET translocation (myeloid leukemia-a... 46 0.15
10gb|AC170761.3| Rhesus Macaque CHR5 BAC CH250-342J4 (Children's H... 46 0.15
11emb|AJ248287.2|CNSPAX05 Pyrococcus abyssi complete genome; segme... 44 0.60
12emb|Z95116.1|HS57G9 Human DNA sequence from clone CTA-57G9 on ch... 44 0.60
13gb|DQ124037.1| Coffea arabica clone MN-SSH4-E01 mRNA sequence 44 0.60
14gb|AC022025.8| Homo sapiens chromosome 10 clone RP11-489D8, comp... 44 0.60
15emb|CR855395.11| Zebrafish DNA sequence from clone CH211-106P4 i... 44 0.60
16gb|AE014842.1| Plasmodium falciparum 3D7 chromosome 11 section 7... 42 2.4
17gb|AC121829.3| Mus musculus BAC clone RP23-480P21 from chromosom... 42 2.4
18emb|AL136163.15| Human DNA sequence from clone RP1-185N19 on chr... 42 2.4
19gb|AC093494.1| Homo sapiens chromosome 3 clone RP11-1004I19 map ... 42 2.4
20gb|AC018841.4| Homo sapiens chromosome 3 clone RP11-7F24 map 3p,... 42 2.4
21emb|BX088526.6| Zebrafish DNA sequence from clone CH211-51H9 in ... 42 2.4
22gb|AY542311.1| Sorghum bicolor clone SB20O07 b1-1, b1-2, putativ... 42 2.4
23emb|AL928817.5| Zebrafish DNA sequence from clone CH211-244H4 in... 42 2.4
24gb|AC145933.3| Gallus gallus BAC clone CH261-41E11 from chromoso... 42 2.4
25gb|AY953371.1| Brevibacillus texasporus strain ATCC PTA-5854 non... 42 2.4
26gb|AC171738.2| Monodelphis domestica clone VMRC6-66F14 map human... 42 2.4
27gb|AC026166.5| Homo sapiens chromosome 3 clone RP11-126L4 map 3p... 42 2.4
28ref|NM_117178.2| Arabidopsis thaliana transcription factor AT4G1... 40 9.4
29gb|AC151766.1| Ornithorhynchus anatinus chromosome UNK clone OAB... 40 9.4
30ref|XM_508805.1| PREDICTED: Pan troglodytes similar to vacuolar ... 40 9.4
31gb|DQ022305.2| Bat SARS coronavirus HKU3-1, complete genome 40 9.4
32ref|NM_193359.1| Oryza sativa (japonica cultivar-group), predic... 40 9.4
33gb|AY432320.1| Aedes aegypti ASAP ID: 37307 putative: gp150-like... 40 9.4
34gb|AY675319.1| Homo sapiens transforming growth factor, beta rec... 40 9.4
35ref|XM_712515.1| Candida albicans SC5314 hypothetical protein (C... 40 9.4
36ref|XM_712441.1| Candida albicans SC5314 hypothetical protein (C... 40 9.4
37gb|DQ084200.1| bat SARS coronavirus HKU3-3, complete genome 40 9.4
38gb|DQ084199.1| bat SARS coronavirus HKU3-2, complete genome 40 9.4
39gb|AY568657.1| Arabidopsis thaliana At4g11080 (At4g11080) mRNA, ... 40 9.4
40gb|AC154992.11| Mus musculus chromosome 1, clone RP23-420P19, co... 40 9.4
41gb|AC099934.14| Mus musculus chromosome 12, clone RP23-17K9, com... 40 9.4
42ref|XM_752392.1| Ustilago maydis 521 hypothetical protein (UM013... 40 9.4
43ref|XM_744891.1| Aspergillus fumigatus Af293 hypothetical protei... 40 9.4
44gb|AC012081.16| Homo sapiens 3 BAC RP11-416O18 (Roswell Park Can... 40 9.4
45emb|CR846088.7| Zebrafish DNA sequence from clone DKEY-189L3 in ... 40 9.4
46ref|NM_021729.4| Homo sapiens vacuolar protein sorting 11 (yeast... 40 9.4
47emb|Z84481.1|HS440O21 Human DNA sequence from clone RP3-440O21 o... 40 9.4
48emb|AL606804.11| Human DNA sequence from clone RP11-978I15 on ch... 40 9.4
49emb|AL390786.15| Human DNA sequence from clone RP11-219F10 on ch... 40 9.4
50emb|AL031010.1|HS422F24 Human DNA sequence from clone RP3-422F24... 40 9.4
51emb|AJ005784.1|BPAJ5784 Brugia pahangi mRNA for heat shock prote... 40 9.4
52ref|XM_775356.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 9.4
53gb|AY133687.1| Arabidopsis thaliana clone C103117 putative 98b p... 40 9.4
54emb|AJ005785.1|BPAJ5785 Brugia pahangi hsp90 gene and 5' region 40 9.4
55emb|AL161531.2|ATCHRIV31 Arabidopsis thaliana DNA chromosome 4, ... 40 9.4
56emb|AL049876.1|ATT22B4 Arabidopsis thaliana DNA chromosome 4, BA... 40 9.4
57emb|AJ630485.1| Arabidopsis thaliana mRNA for hypothetical prote... 40 9.4
58emb|AL645702.14| Mouse DNA sequence from clone RP23-163J17 on ch... 40 9.4
59gb|BC065563.1| Homo sapiens vacuolar protein sorting 11 (yeast),... 40 9.4
60emb|CR860002.1| Pongo pygmaeus mRNA; cDNA DKFZp459C2226 (from cl... 40 9.4
61gb|AY550117.1| Megachile rotundata 90 kDa heat shock protein (HS... 40 9.4
62emb|AL834218.1|HSM805640 Homo sapiens mRNA; cDNA DKFZp564P2364 (... 40 9.4
63emb|CR749396.1| Homo sapiens mRNA; cDNA DKFZp781G0123 (from clon... 40 9.4
64dbj|AK056701.1| Homo sapiens cDNA FLJ32139 fis, clone PLACE50000... 40 9.4
65dbj|AK023279.1| Homo sapiens cDNA FLJ13217 fis, clone NT2RP40016... 40 9.4
66gb|AC096921.2| Homo sapiens chromosome 3 clone RP11-1024P17, com... 40 9.4
67gb|AF079839.1|AF079839 Stentor coeruleus G protein alpha GI2-lik... 40 9.4
68gb|S76367.1| heat shock protein 90=excretory/secretory antigen [... 40 9.4
69gb|AY616033.2| Burkholderia cenocepacia phage BcepB1A, complete ... 40 9.4
70gb|AC024341.9|AC024341 Homo sapiens chromosome 11, clone RP11-33... 40 9.4
71gb|AC019216.9|AC019216 Homo sapiens BAC clone RP11-484N11 from 4... 40 9.4
72dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
73gb|AF308800.1|AF308800 Homo sapiens vacuolar protein sorting pro... 40 9.4
74gb|AC093910.2| Homo sapiens BAC clone RP11-762H11 from 2, comple... 40 9.4
75dbj|AK223158.1| Homo sapiens mRNA for vacuolar protein sorting 1... 40 9.4
76gb|AC010983.9| Homo sapiens BAC clone RP11-484E10 from 2, comple... 40 9.4
77gb|AC018558.6| Homo sapiens chromosome 16 clone RP11-80F22, comp... 40 9.4
78dbj|AP004614.4| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
79dbj|AP004231.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
80gb|AF251290.1|AF251290 Plasmodium falciparum glutamic acid-rich ... 40 9.4
81ref|XM_224715.3| PREDICTED: Rattus norvegicus similar to mKIAA16... 40 9.4
82gb|AC153118.4| Monodelphis domestica clone VMRC6-501L16, complet... 40 9.4
83emb|BX641067.1|HSM806837 Homo sapiens mRNA; cDNA DKFZp686I1925 (... 40 9.4
84emb|AL845481.5| Zebrafish DNA sequence from clone DKEY-46N18 in ... 40 9.4
85gb|AC101752.14| Mus musculus chromosome 1, clone RP24-344C18, co... 40 9.4
86dbj|AP001561.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 9.4
87gb|AC161367.4| Mus musculus BAC clone RP23-450F3 from chromosome... 40 9.4
88gb|AF080120.1|F2P3 Arabidopsis thaliana BAC F2P3 40 9.4
89dbj|AP003392.2| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 9.4
90gb|AC158748.9| Mus musculus chromosome 7, clone RP23-239H14, com... 40 9.4
91gb|AC154372.1| Mus musculus BAC clone RP23-113F18 from 16, compl... 40 9.4
92gb|AY957661.1| Homo sapiens iodotyrosine dehelogenase 1 isoform ... 40 9.4
93gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold 40 9.4
94dbj|AB027508.2| Homo sapiens mRNA for hVPS11, complete cds 40 9.4 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 74/82 (90%)
 Strand = Plus / Minus

                                                                            
Query: 190      agcagcacacgaccatccttgcctcgagctgcctctccatgttgaatcttgcaatgaagt 249
                ||||||| || | |||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 16191098 agcagcagacaagcatccttgcctcaagctgcctctccatgttgaaccttgcaatgaagt 16191039

                                      
Query: 250      cttccactctcctattcagctc 271
                | |||||||| | |||||||||
Sbjct: 16191038 cctccactctacgattcagctc 16191017



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 80/94 (85%)
 Strand = Plus / Minus

                                                                            
Query: 183      cctcagcagcagcacacgaccatccttgcctcgagctgcctctccatgttgaatcttgca 242
                ||||| |||||||| || | |||||| ||||| |||||||||||||||||||| ||||| 
Sbjct: 16213962 cctcaacagcagcagaccagcatcctggcctccagctgcctctccatgttgaaccttgcg 16213903

                                                  
Query: 243      atgaagtcttccactctcctattcagctcctcgg 276
                ||||| || ||||||| ||  |||||||| ||||
Sbjct: 16213902 atgaattcctccactcgccggttcagctcgtcgg 16213869



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                            
Query: 586      actcggtggcaaggaagaggacgatgatgttggagaagatgaagaggcacttgggtgtgg 645
                ||||| |||| ||||||| |||||||||||||||||||||||| |||||| | ||||| |
Sbjct: 16190618 actcgctggcgaggaagatgacgatgatgttggagaagatgaacaggcacctcggtgtcg 16190559

                   
Query: 646      cga 648
                |||
Sbjct: 16190558 cga 16190556



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                            
Query: 597      aggaagaggacgatgatgttggagaagatgaagaggcacttggg 640
                ||||||| ||||||||||||||||||||  ||||||||||||||
Sbjct: 16213449 aggaagacgacgatgatgttggagaagacaaagaggcacttggg 16213406
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>dbj|AK068042.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132H03, full
           insert sequence
          Length = 1181

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 74/82 (90%)
 Strand = Plus / Minus

                                                                       
Query: 190 agcagcacacgaccatccttgcctcgagctgcctctccatgttgaatcttgcaatgaagt 249
           ||||||| || | |||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 793 agcagcagacaagcatccttgcctcaagctgcctctccatgttgaaccttgcaatgaagt 734

                                 
Query: 250 cttccactctcctattcagctc 271
           | |||||||| | |||||||||
Sbjct: 733 cctccactctacgattcagctc 712



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                       
Query: 586 actcggtggcaaggaagaggacgatgatgttggagaagatgaagaggcacttgggtgtgg 645
           ||||| |||| ||||||| |||||||||||||||||||||||| |||||| | ||||| |
Sbjct: 313 actcgctggcgaggaagatgacgatgatgttggagaagatgaacaggcacctcggtgtcg 254

              
Query: 646 cga 648
           |||
Sbjct: 253 cga 251
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 74/82 (90%)
 Strand = Plus / Minus

                                                                            
Query: 190      agcagcacacgaccatccttgcctcgagctgcctctccatgttgaatcttgcaatgaagt 249
                ||||||| || | |||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 16144331 agcagcagacaagcatccttgcctcaagctgcctctccatgttgaaccttgcaatgaagt 16144272

                                      
Query: 250      cttccactctcctattcagctc 271
                | |||||||| | |||||||||
Sbjct: 16144271 cctccactctacgattcagctc 16144250



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 80/94 (85%)
 Strand = Plus / Minus

                                                                            
Query: 183      cctcagcagcagcacacgaccatccttgcctcgagctgcctctccatgttgaatcttgca 242
                ||||| |||||||| || | |||||| ||||| |||||||||||||||||||| ||||| 
Sbjct: 16167195 cctcaacagcagcagaccagcatcctggcctccagctgcctctccatgttgaaccttgcg 16167136

                                                  
Query: 243      atgaagtcttccactctcctattcagctcctcgg 276
                ||||| || ||||||| ||  |||||||| ||||
Sbjct: 16167135 atgaattcctccactcgccggttcagctcgtcgg 16167102



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                            
Query: 586      actcggtggcaaggaagaggacgatgatgttggagaagatgaagaggcacttgggtgtgg 645
                ||||| |||| ||||||| |||||||||||||||||||||||| |||||| | ||||| |
Sbjct: 16143851 actcgctggcgaggaagatgacgatgatgttggagaagatgaacaggcacctcggtgtcg 16143792

                   
Query: 646      cga 648
                |||
Sbjct: 16143791 cga 16143789



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                            
Query: 597      aggaagaggacgatgatgttggagaagatgaagaggcacttggg 640
                ||||||| ||||||||||||||||||||  ||||||||||||||
Sbjct: 16166682 aggaagacgacgatgatgttggagaagacaaagaggcacttggg 16166639
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>emb|BX649219.2|CNS09SBY Oryza sativa chromosome 12, . BAC B1097F04 of chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 165955

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 74/82 (90%)
 Strand = Plus / Plus

                                                                         
Query: 190   agcagcacacgaccatccttgcctcgagctgcctctccatgttgaatcttgcaatgaagt 249
             ||||||| || | |||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 52245 agcagcagacaagcatccttgcctcaagctgcctctccatgttgaaccttgcaatgaagt 52304

                                   
Query: 250   cttccactctcctattcagctc 271
             | |||||||| | |||||||||
Sbjct: 52305 cctccactctacgattcagctc 52326



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 80/94 (85%)
 Strand = Plus / Plus

                                                                         
Query: 183   cctcagcagcagcacacgaccatccttgcctcgagctgcctctccatgttgaatcttgca 242
             ||||| |||||||| || | |||||| ||||| |||||||||||||||||||| ||||| 
Sbjct: 29381 cctcaacagcagcagaccagcatcctggcctccagctgcctctccatgttgaaccttgcg 29440

                                               
Query: 243   atgaagtcttccactctcctattcagctcctcgg 276
             ||||| || ||||||| ||  |||||||| ||||
Sbjct: 29441 atgaattcctccactcgccggttcagctcgtcgg 29474



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                         
Query: 586   actcggtggcaaggaagaggacgatgatgttggagaagatgaagaggcacttgggtgtgg 645
             ||||| |||| ||||||| |||||||||||||||||||||||| |||||| | ||||| |
Sbjct: 52725 actcgctggcgaggaagatgacgatgatgttggagaagatgaacaggcacctcggtgtcg 52784

                
Query: 646   cga 648
             |||
Sbjct: 52785 cga 52787



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                         
Query: 597   aggaagaggacgatgatgttggagaagatgaagaggcacttggg 640
             ||||||| ||||||||||||||||||||  ||||||||||||||
Sbjct: 29894 aggaagacgacgatgatgttggagaagacaaagaggcacttggg 29937
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>ref|XM_701656.1| PREDICTED: Danio rerio similar to SET translocation (myeloid
            leukemia-associated) A, transcript variant 3 (LOC557530),
            mRNA
          Length = 1845

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 597  aggaagaggacgatgatgttggagaagatga 627
            |||||||||||||||||| |||||| |||||
Sbjct: 996  aggaagaggacgatgatgatggagaggatga 1026
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>ref|XM_677799.1| PREDICTED: Danio rerio similar to SET translocation (myeloid
            leukemia-associated) A, transcript variant 1 (LOC557530),
            mRNA
          Length = 1827

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 597  aggaagaggacgatgatgttggagaagatga 627
            |||||||||||||||||| |||||| |||||
Sbjct: 978  aggaagaggacgatgatgatggagaggatga 1008
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>ref|NM_201475.1| Danio rerio SET translocation (myeloid leukemia-associated) A
           (seta), mRNA
          Length = 1715

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 597 aggaagaggacgatgatgttggagaagatga 627
           |||||||||||||||||| |||||| |||||
Sbjct: 961 aggaagaggacgatgatgatggagaggatga 991
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>emb|AL845526.25| Zebrafish DNA sequence from clone CH211-11P18 in linkage group 22,
              complete sequence
          Length = 165617

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 153    acacaaacacaaacatgattaag 175
              |||||||||||||||||||||||
Sbjct: 109293 acacaaacacaaacatgattaag 109315
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>gb|BC046082.1| Danio rerio SET translocation (myeloid leukemia-associated) A, mRNA
           (cDNA clone MGC:56333 IMAGE:5603762), complete cds
          Length = 1715

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 597 aggaagaggacgatgatgttggagaagatga 627
           |||||||||||||||||| |||||| |||||
Sbjct: 961 aggaagaggacgatgatgatggagaggatga 991
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>gb|AC170761.3| Rhesus Macaque CHR5 BAC CH250-342J4 (Children's Hospital Oakland
             Research Institute Rhesus macaque Adult Male BAC Library)
             complete sequence
          Length = 160607

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 306   tcttccttcatcacctcttcttc 328
             |||||||||||||||||||||||
Sbjct: 15424 tcttccttcatcacctcttcttc 15446
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>emb|AJ248287.2|CNSPAX05 Pyrococcus abyssi complete genome; segment 5/6
          Length = 305600

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 614    gttggagaagatgaagaggcac 635
              ||||||||||||||||||||||
Sbjct: 298647 gttggagaagatgaagaggcac 298626
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>emb|Z95116.1|HS57G9 Human DNA sequence from clone CTA-57G9 on chromosome 22q12.1,
            complete sequence
          Length = 113872

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 308  ttccttcatcacctcttcttcc 329
            ||||||||||||||||||||||
Sbjct: 3476 ttccttcatcacctcttcttcc 3455
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>gb|DQ124037.1| Coffea arabica clone MN-SSH4-E01 mRNA sequence
          Length = 295

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 331 ggtcatcaccaacattattaac 352
           ||||||||||||||||||||||
Sbjct: 248 ggtcatcaccaacattattaac 269
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>gb|AC022025.8| Homo sapiens chromosome 10 clone RP11-489D8, complete sequence
          Length = 189762

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 148   taattacacaaacacaaacatgatta 173
             |||| |||||||||||||||||||||
Sbjct: 93231 taatgacacaaacacaaacatgatta 93256
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>emb|CR855395.11| Zebrafish DNA sequence from clone CH211-106P4 in linkage group 18,
             complete sequence
          Length = 55248

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 154   cacaaacacaaacatgattaag 175
             ||||||||||||||||||||||
Sbjct: 35991 cacaaacacaaacatgattaag 35970
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>gb|AE014842.1| Plasmodium falciparum 3D7 chromosome 11 section 7 of 8 of the complete
              sequence
          Length = 253151

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 292    cctcttcacagtcttcttcct 312
              |||||||||||||||||||||
Sbjct: 157585 cctcttcacagtcttcttcct 157565
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>gb|AC121829.3| Mus musculus BAC clone RP23-480P21 from chromosome 5, complete sequence
          Length = 197131

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 201   accatccttgcctcgagctgcctct 225
             |||||||||| ||||||||||||||
Sbjct: 29342 accatccttgtctcgagctgcctct 29366
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>emb|AL136163.15| Human DNA sequence from clone RP1-185N19 on chromosome 6q22.1-22.33
             Contains part of the gene for endoplasmic reticulum
             associated protein 140 kDa (ERAP140) (similar to nucleolar
             protein C7B), complete sequence
          Length = 79439

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 128   accagctttggcaaatacctt 148
             |||||||||||||||||||||
Sbjct: 52104 accagctttggcaaatacctt 52124
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>gb|AC093494.1| Homo sapiens chromosome 3 clone RP11-1004I19 map 3p, complete
            sequence
          Length = 159189

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 306  tcttccttcatcacctcttcttcca 330
            |||||||||| ||||||||||||||
Sbjct: 8008 tcttccttcaacacctcttcttcca 7984
to top
>gb|AC018841.4| Homo sapiens chromosome 3 clone RP11-7F24 map 3p, complete sequence
          Length = 198264

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 306    tcttccttcatcacctcttcttcca 330
              |||||||||| ||||||||||||||
Sbjct: 182668 tcttccttcaacacctcttcttcca 182644
to top
>emb|BX088526.6| Zebrafish DNA sequence from clone CH211-51H9 in linkage group 8,
             complete sequence
          Length = 187161

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 597   aggaagaggacgatgatgttggaga 621
             |||||||||||||||||| ||||||
Sbjct: 60562 aggaagaggacgatgatgatggaga 60538
to top
>gb|AY542311.1| Sorghum bicolor clone SB20O07 b1-1, b1-2, putative genetic modifier,
             hypothetical protein, putative NAM protein, putative
             cis-zeatin O-glucosyltransferases, putative small nuclear
             ribonucleoprotein, putative cis-zeatin
             O-glucosyltransferase, putative glutathione peroxidase,
             putative copper-exporting ATPases, putative
             serine/threonine dehydratase, and putative actin
             depolymerizing factor genes, complete cds; and
             hypothetical protein gene, partial cds
          Length = 157237

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 601   agaggacgatgatgttggaga 621
             |||||||||||||||||||||
Sbjct: 50901 agaggacgatgatgttggaga 50921
to top
>emb|AL928817.5| Zebrafish DNA sequence from clone CH211-244H4 in linkage group 22,
             complete sequence
          Length = 153594

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 155   acaaacacaaacatgattaag 175
             |||||||||||||||||||||
Sbjct: 73571 acaaacacaaacatgattaag 73551
to top
>gb|AC145933.3| Gallus gallus BAC clone CH261-41E11 from chromosome unknown, complete
              sequence
          Length = 209915

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 58     taaggtaccaataccagcttt 78
              |||||||||||||||||||||
Sbjct: 142795 taaggtaccaataccagcttt 142775
to top
>gb|AY953371.1| Brevibacillus texasporus strain ATCC PTA-5854 nonribosomal peptide
             synthetase operon, complete sequence
          Length = 50646

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 318   acctcttcttccaggtcatca 338
             |||||||||||||||||||||
Sbjct: 12371 acctcttcttccaggtcatca 12351
to top
>gb|AC171738.2| Monodelphis domestica clone VMRC6-66F14 map human ortholog 4q31.21,
              complete sequence
          Length = 142956

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 31     ttaattacacagacataagtg 51
              |||||||||||||||||||||
Sbjct: 101720 ttaattacacagacataagtg 101740
to top
>gb|AC026166.5| Homo sapiens chromosome 3 clone RP11-126L4 map 3p, complete sequence
          Length = 163864

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 306   tcttccttcatcacctcttcttcca 330
             |||||||||| ||||||||||||||
Sbjct: 67987 tcttccttcaacacctcttcttcca 67963
to top
>ref|NM_117178.2| Arabidopsis thaliana transcription factor AT4G11080 mRNA, complete
           cds
          Length = 1372

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 611 gatgttggagaagatgaaga 630
           ||||||||||||||||||||
Sbjct: 156 gatgttggagaagatgaaga 175
to top
>gb|AC151766.1| Ornithorhynchus anatinus chromosome UNK clone OABb-433A1, complete
              sequence
          Length = 161653

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 133    ctttggcaaataccttaattacac 156
              |||||||||||| |||||||||||
Sbjct: 157661 ctttggcaaatatcttaattacac 157638



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 17     ctttggcaaataccttaattacac 40
              |||||||||||| |||||||||||
Sbjct: 157661 ctttggcaaatatcttaattacac 157638
to top
>ref|XM_508805.1| PREDICTED: Pan troglodytes similar to vacuolar protein sorting 11
           (yeast homolog); vacuolar protein sorting protein 11
           (LOC451601), mRNA
          Length = 1861

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 613 tgttggagaagatgaagagg 632
           ||||||||||||||||||||
Sbjct: 303 tgttggagaagatgaagagg 322
to top
>gb|DQ022305.2| Bat SARS coronavirus HKU3-1, complete genome
          Length = 29728

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 293  ctcttcacagtcttcttcct 312
            ||||||||||||||||||||
Sbjct: 3069 ctcttcacagtcttcttcct 3050
to top
>ref|NM_193359.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1470

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 614 gttggagaagatgaagaggc 633
           ||||||||||||||||||||
Sbjct: 526 gttggagaagatgaagaggc 545
to top
>gb|AY432320.1| Aedes aegypti ASAP ID: 37307 putative: gp150-like mRNA sequence
          Length = 701

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 605 gacgatgatgttggagaagatgaa 628
           ||||||||||||| ||||||||||
Sbjct: 593 gacgatgatgttgaagaagatgaa 616
to top
>gb|AY675319.1| Homo sapiens transforming growth factor, beta receptor II (70/80kDa)
             (TGFBR2) gene, complete cds
          Length = 89014

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 312   ttcatcacctcttcttccag 331
             ||||||||||||||||||||
Sbjct: 40716 ttcatcacctcttcttccag 40697
to top
>ref|XM_712515.1| Candida albicans SC5314 hypothetical protein (CaO19_5070), mRNA
          Length = 1296

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 602 gaggacgatgatgttggagaagat 625
           ||||||||||||| ||||||||||
Sbjct: 632 gaggacgatgatgatggagaagat 609
to top
>ref|XM_712441.1| Candida albicans SC5314 hypothetical protein (CaO19_12536), mRNA
          Length = 1308

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 602 gaggacgatgatgttggagaagat 625
           ||||||||||||| ||||||||||
Sbjct: 632 gaggacgatgatgatggagaagat 609
to top
>gb|DQ084200.1| bat SARS coronavirus HKU3-3, complete genome
          Length = 29711

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 293  ctcttcacagtcttcttcct 312
            ||||||||||||||||||||
Sbjct: 3052 ctcttcacagtcttcttcct 3033
to top
>gb|DQ084199.1| bat SARS coronavirus HKU3-2, complete genome
          Length = 29687

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 293  ctcttcacagtcttcttcct 312
            ||||||||||||||||||||
Sbjct: 3052 ctcttcacagtcttcttcct 3033
to top
>gb|AY568657.1| Arabidopsis thaliana At4g11080 (At4g11080) mRNA, complete cds
          Length = 1353

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 611 gatgttggagaagatgaaga 630
           ||||||||||||||||||||
Sbjct: 168 gatgttggagaagatgaaga 187
to top
>gb|AC154992.11| Mus musculus chromosome 1, clone RP23-420P19, complete sequence
          Length = 217255

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 610    tgatgttggagaagatgaag 629
              ||||||||||||||||||||
Sbjct: 213243 tgatgttggagaagatgaag 213224
to top
>gb|AC099934.14| Mus musculus chromosome 12, clone RP23-17K9, complete sequence
          Length = 234795

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 612    atgttggagaagatgaagag 631
              ||||||||||||||||||||
Sbjct: 200600 atgttggagaagatgaagag 200581
to top
>ref|XM_752392.1| Ustilago maydis 521 hypothetical protein (UM01338.1) partial mRNA
          Length = 2487

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 590 ggtggcaaggaagaggacga 609
           ||||||||||||||||||||
Sbjct: 212 ggtggcaaggaagaggacga 193
to top
>ref|XM_744891.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g02340)
           partial mRNA
          Length = 1335

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 185 tcagcagcagcacacgacca 204
           ||||||||||||||||||||
Sbjct: 859 tcagcagcagcacacgacca 878
to top
>gb|AC012081.16| Homo sapiens 3 BAC RP11-416O18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 178317

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 209   tgcctcgagctgcctctcca 228
             ||||||||||||||||||||
Sbjct: 31410 tgcctcgagctgcctctcca 31391
to top
>emb|CR846088.7| Zebrafish DNA sequence from clone DKEY-189L3 in linkage group 11,
             complete sequence
          Length = 162255

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 392   cacatcctcctcttcacatt 411
             ||||||||||||||||||||
Sbjct: 76005 cacatcctcctcttcacatt 76024
to top
>ref|NM_021729.4| Homo sapiens vacuolar protein sorting 11 (yeast) (VPS11), mRNA
          Length = 3279

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 613 tgttggagaagatgaagagg 632
           ||||||||||||||||||||
Sbjct: 345 tgttggagaagatgaagagg 364
to top
>emb|Z84481.1|HS440O21 Human DNA sequence from clone RP3-440O21 on chromosome X, complete
             sequence
          Length = 107677

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 365   actctcttcttccctcatgc 384
             ||||||||||||||||||||
Sbjct: 72137 actctcttcttccctcatgc 72156
to top
>emb|AL606804.11| Human DNA sequence from clone RP11-978I15 on chromosome 1 Contains the
             3' end of the CIAS1 gene for cold autoinflammatory
             syndrome 1, the gene for a novel 7 transmembrane receptor
             (rhodopsin family) protein, a 7 transmembrane receptor
             (rhodopsin family) pseudogene, two novel genes (LOC148823,
             LOC148824), the OR2C3 gene for olfactory receptor family 2
             subfamily C member 3, the 3' end of a novel gene, the
             OR2G2 for olfactory receptor family 2 subfamily G member
             2, the OR2G3 for olfactory receptor family 2 subfamily G
             member 3, the gene for a novel protein similar to
             Olfactory receptor 5AV1 (LOC127617) and three CpG islands,
             complete sequence
          Length = 185467

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 305   ttcttccttcatcacctctt 324
             ||||||||||||||||||||
Sbjct: 39545 ttcttccttcatcacctctt 39564
to top
>emb|AL390786.15| Human DNA sequence from clone RP11-219F10 on chromosome 10 Contains a
             novel gene, complete sequence
          Length = 104712

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 391   acacatcctcctcttcacat 410
             ||||||||||||||||||||
Sbjct: 87580 acacatcctcctcttcacat 87599
to top
>emb|AL031010.1|HS422F24 Human DNA sequence from clone RP3-422F24 on chromosome 6q24.1-25.2
             Contains the C6orf71 gene and a signal sequence receptor,
             alpha (translocon-associated protein alpha) (SSR1) (TRAPA)
             pseudogene, complete sequence
          Length = 107159

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 309   tccttcatcacctcttcttc 328
             ||||||||||||||||||||
Sbjct: 84318 tccttcatcacctcttcttc 84337
to top
>emb|AJ005784.1|BPAJ5784 Brugia pahangi mRNA for heat shock protein 90
          Length = 2527

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 611 gatgttggagaagatgaaga 630
           ||||||||||||||||||||
Sbjct: 796 gatgttggagaagatgaaga 815
to top
>ref|XM_775356.1| PREDICTED: Strongylocentrotus purpuratus similar to DKFZP586A0522
           protein (LOC574948), mRNA
          Length = 756

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 515 ctcgcggaccacagcatctatgtcatcc 542
           ||||| |||||||||||| |||||||||
Sbjct: 498 ctcgctgaccacagcatcaatgtcatcc 471
to top
>gb|AY133687.1| Arabidopsis thaliana clone C103117 putative 98b protein (At4g11080)
           mRNA, complete cds
          Length = 1372

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 611 gatgttggagaagatgaaga 630
           ||||||||||||||||||||
Sbjct: 156 gatgttggagaagatgaaga 175
to top
>emb|AJ005785.1|BPAJ5785 Brugia pahangi hsp90 gene and 5' region
          Length = 4686

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 611  gatgttggagaagatgaaga 630
            ||||||||||||||||||||
Sbjct: 2252 gatgttggagaagatgaaga 2271
to top
>emb|AL161531.2|ATCHRIV31 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 31
          Length = 198301

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 611  gatgttggagaagatgaaga 630
            ||||||||||||||||||||
Sbjct: 7354 gatgttggagaagatgaaga 7335
to top
>emb|AL049876.1|ATT22B4 Arabidopsis thaliana DNA chromosome 4, BAC clone T22B4 (ESSA project)
          Length = 108598

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 611   gatgttggagaagatgaaga 630
             ||||||||||||||||||||
Sbjct: 34887 gatgttggagaagatgaaga 34868
to top
>emb|AJ630485.1| Arabidopsis thaliana mRNA for hypothetical protein, clone At4g11080
          Length = 1353

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 611 gatgttggagaagatgaaga 630
           ||||||||||||||||||||
Sbjct: 168 gatgttggagaagatgaaga 187
to top
>emb|AL645702.14| Mouse DNA sequence from clone RP23-163J17 on chromosome 1 Contains a
              ribosomal protein S2 (Rps2) pseudogene, a tigger
              transposable element derived 1 (TIGD1) pseudogene and a
              ribosomal protein L17 (Rpl17) pseudogene, complete sequence
          Length = 205103

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 153    acacaaacacaaacatgattaagctact 180
              ||||||||| ||| ||||||||||||||
Sbjct: 127214 acacaaacataaaaatgattaagctact 127241
to top
>gb|BC065563.1| Homo sapiens vacuolar protein sorting 11 (yeast), mRNA (cDNA clone
           MGC:74765 IMAGE:6144541), complete cds
          Length = 3243

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 613 tgttggagaagatgaagagg 632
           ||||||||||||||||||||
Sbjct: 309 tgttggagaagatgaagagg 328
to top
>emb|CR860002.1| Pongo pygmaeus mRNA; cDNA DKFZp459C2226 (from clone DKFZp459C2226)
          Length = 3202

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 613 tgttggagaagatgaagagg 632
           ||||||||||||||||||||
Sbjct: 313 tgttggagaagatgaagagg 332
to top
>gb|AY550117.1| Megachile rotundata 90 kDa heat shock protein (HSP90) mRNA, partial
           cds
          Length = 708

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 611 gatgttggagaagatgaaga 630
           ||||||||||||||||||||
Sbjct: 360 gatgttggagaagatgaaga 379
to top
>emb|AL834218.1|HSM805640 Homo sapiens mRNA; cDNA DKFZp564P2364 (from clone DKFZp564P2364)
          Length = 3205

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 613 tgttggagaagatgaagagg 632
           ||||||||||||||||||||
Sbjct: 324 tgttggagaagatgaagagg 343
to top
>emb|CR749396.1| Homo sapiens mRNA; cDNA DKFZp781G0123 (from clone DKFZp781G0123)
          Length = 5497

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 209 tgcctcgagctgcctctcca 228
           ||||||||||||||||||||
Sbjct: 681 tgcctcgagctgcctctcca 662
to top
>dbj|AK056701.1| Homo sapiens cDNA FLJ32139 fis, clone PLACE5000037, highly similar
           to Homo sapiens mRNA for hVPS11
          Length = 3386

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 613 tgttggagaagatgaagagg 632
           ||||||||||||||||||||
Sbjct: 338 tgttggagaagatgaagagg 357
to top
>dbj|AK023279.1| Homo sapiens cDNA FLJ13217 fis, clone NT2RP4001656, weakly similar
           to VACUOLAR BIOGENESIS PROTEIN END1
          Length = 3217

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 613 tgttggagaagatgaagagg 632
           ||||||||||||||||||||
Sbjct: 347 tgttggagaagatgaagagg 366
to top
>gb|AC096921.2| Homo sapiens chromosome 3 clone RP11-1024P17, complete sequence
          Length = 201412

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 312    ttcatcacctcttcttccag 331
              ||||||||||||||||||||
Sbjct: 119950 ttcatcacctcttcttccag 119931
to top
>gb|AF079839.1|AF079839 Stentor coeruleus G protein alpha GI2-like subunit mRNA, partial
           cds
          Length = 427

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 608 gatgatgttggagaagatga 627
           ||||||||||||||||||||
Sbjct: 79  gatgatgttggagaagatga 60
to top
>gb|S76367.1| heat shock protein 90=excretory/secretory antigen [Brugia malayi,
           male, adult, mRNA, 216 nt]
          Length = 216

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 611 gatgttggagaagatgaaga 630
           ||||||||||||||||||||
Sbjct: 151 gatgttggagaagatgaaga 170
to top
>gb|AY616033.2| Burkholderia cenocepacia phage BcepB1A, complete genome
          Length = 47399

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 644   ggcgatcgctgaagcggcag 663
             ||||||||||||||||||||
Sbjct: 37110 ggcgatcgctgaagcggcag 37091
to top
>gb|AC024341.9|AC024341 Homo sapiens chromosome 11, clone RP11-336F14, complete sequence
          Length = 165260

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 151   ttacacaaacacaaacatga 170
             ||||||||||||||||||||
Sbjct: 77906 ttacacaaacacaaacatga 77887
to top
>gb|AC019216.9|AC019216 Homo sapiens BAC clone RP11-484N11 from 4, complete sequence
          Length = 160858

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 367    tctcttcttccctcatgccc 386
              ||||||||||||||||||||
Sbjct: 117862 tctcttcttccctcatgccc 117881
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 614      gttggagaagatgaagaggc 633
                ||||||||||||||||||||
Sbjct: 20371810 gttggagaagatgaagaggc 20371829
to top
>gb|AF308800.1|AF308800 Homo sapiens vacuolar protein sorting protein 11 (VPS11) mRNA,
           complete cds
          Length = 3219

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 613 tgttggagaagatgaagagg 632
           ||||||||||||||||||||
Sbjct: 309 tgttggagaagatgaagagg 328
to top
>gb|AC093910.2| Homo sapiens BAC clone RP11-762H11 from 2, complete sequence
          Length = 166731

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 143   taccttaattacacaaacac 162
             ||||||||||||||||||||
Sbjct: 46671 taccttaattacacaaacac 46652
to top
>dbj|AK223158.1| Homo sapiens mRNA for vacuolar protein sorting 11 (yeast homolog)
           variant, clone: LNG11645
          Length = 3151

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 613 tgttggagaagatgaagagg 632
           ||||||||||||||||||||
Sbjct: 335 tgttggagaagatgaagagg 354
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>gb|AC010983.9| Homo sapiens BAC clone RP11-484E10 from 2, complete sequence
          Length = 189870

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 143    taccttaattacacaaacac 162
              ||||||||||||||||||||
Sbjct: 163051 taccttaattacacaaacac 163032
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>gb|AC018558.6| Homo sapiens chromosome 16 clone RP11-80F22, complete sequence
          Length = 151051

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 608   gatgatgttggagaagatga 627
             ||||||||||||||||||||
Sbjct: 36718 gatgatgttggagaagatga 36737
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>dbj|AP004614.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0042P21
          Length = 141230

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 614   gttggagaagatgaagaggc 633
             ||||||||||||||||||||
Sbjct: 27925 gttggagaagatgaagaggc 27944
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>dbj|AP004231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0026J14
          Length = 163496

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 614    gttggagaagatgaagaggc 633
              ||||||||||||||||||||
Sbjct: 137843 gttggagaagatgaagaggc 137862
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>gb|AF251290.1|AF251290 Plasmodium falciparum glutamic acid-rich protein gene, complete cds
          Length = 2263

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 599  gaagaggacgatgatgttggagaagatgaaga 630
            ||||| || ||||||| |||||||||||||||
Sbjct: 2057 gaagatgaagatgatgctggagaagatgaaga 2088
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>ref|XM_224715.3| PREDICTED: Rattus norvegicus similar to mKIAA1623 protein
            (LOC306340), mRNA
          Length = 3324

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 590  ggtggcaaggaagaggacga 609
            ||||||||||||||||||||
Sbjct: 2314 ggtggcaaggaagaggacga 2333
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>gb|AC153118.4| Monodelphis domestica clone VMRC6-501L16, complete sequence
          Length = 61064

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 294   tcttcacagtcttcttcctt 313
             ||||||||||||||||||||
Sbjct: 31852 tcttcacagtcttcttcctt 31871
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>emb|BX641067.1|HSM806837 Homo sapiens mRNA; cDNA DKFZp686I1925 (from clone DKFZp686I1925)
          Length = 6458

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 209  tgcctcgagctgcctctcca 228
            ||||||||||||||||||||
Sbjct: 1492 tgcctcgagctgcctctcca 1473
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>emb|AL845481.5| Zebrafish DNA sequence from clone DKEY-46N18 in linkage group 17,
              complete sequence
          Length = 237313

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 483    gtctctttgattgcatgtgtaaaa 506
              |||| |||||||||||||||||||
Sbjct: 193297 gtctatttgattgcatgtgtaaaa 193320
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>gb|AC101752.14| Mus musculus chromosome 1, clone RP24-344C18, complete sequence
          Length = 164759

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 610   tgatgttggagaagatgaag 629
             ||||||||||||||||||||
Sbjct: 19057 tgatgttggagaagatgaag 19038
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>dbj|AP001561.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-732G1, complete
              sequences
          Length = 195800

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 248    gtcttccactctcctattca 267
              ||||||||||||||||||||
Sbjct: 169058 gtcttccactctcctattca 169077
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>gb|AC161367.4| Mus musculus BAC clone RP23-450F3 from chromosome 1, complete sequence
          Length = 188588

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    gctttggcaaataccttaat 35
             ||||||||||||||||||||
Sbjct: 75057 gctttggcaaataccttaat 75076



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 132   gctttggcaaataccttaat 151
             ||||||||||||||||||||
Sbjct: 75057 gctttggcaaataccttaat 75076
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>gb|AF080120.1|F2P3 Arabidopsis thaliana BAC F2P3
          Length = 74406

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 611   gatgttggagaagatgaaga 630
             ||||||||||||||||||||
Sbjct: 58467 gatgttggagaagatgaaga 58486
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>dbj|AP003392.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-110I1, complete
              sequence
          Length = 178341

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 613    tgttggagaagatgaagagg 632
              ||||||||||||||||||||
Sbjct: 160376 tgttggagaagatgaagagg 160395
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>gb|AC158748.9| Mus musculus chromosome 7, clone RP23-239H14, complete sequence
          Length = 167144

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 527    agcatctatgtcatcctcac 546
              ||||||||||||||||||||
Sbjct: 153621 agcatctatgtcatcctcac 153602
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>gb|AC154372.1| Mus musculus BAC clone RP23-113F18 from 16, complete sequence
          Length = 183227

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 149   aattacacaaacacaaacat 168
             ||||||||||||||||||||
Sbjct: 21815 aattacacaaacacaaacat 21796
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>gb|AY957661.1| Homo sapiens iodotyrosine dehelogenase 1 isoform F (DEHAL1) mRNA,
           complete cds, alternatively spliced
          Length = 684

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 309 tccttcatcacctcttcttc 328
           ||||||||||||||||||||
Sbjct: 31  tccttcatcacctcttcttc 12
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>gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold
          Length = 1833844

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 294    tcttcacagtcttcttcctt 313
              ||||||||||||||||||||
Sbjct: 240154 tcttcacagtcttcttcctt 240173
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>dbj|AB027508.2| Homo sapiens mRNA for hVPS11, complete cds
          Length = 3249

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 613 tgttggagaagatgaagagg 632
           ||||||||||||||||||||
Sbjct: 345 tgttggagaagatgaagagg 364


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,581,694
Number of Sequences: 3902068
Number of extensions: 7581694
Number of successful extensions: 155563
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 155182
Number of HSP's gapped (non-prelim): 381
length of query: 684
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 661
effective length of database: 17,143,297,704
effective search space: 11331719782344
effective search space used: 11331719782344
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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