ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd27e05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CAR14_MOUSE (Q99KF0) Caspase recruitment domain-containing prote... 31 3.6
2Y2917_ACIAD (Q6F8I3) UPF0176 protein ACIAD2917 30 8.0

>CAR14_MOUSE (Q99KF0) Caspase recruitment domain-containing protein 14|
           (Bcl10-interacting MAGUK protein 2) (Bimp2)
          Length = 999

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 18/49 (36%), Positives = 23/49 (46%)
 Frame = +1

Query: 40  ITPILFLPRKAWFSGFSNALRMETKEYNTV*CVAATPNYGQAQQQRLHL 186
           +T  +F  R  W +   N   M+  E  T+      PNY QAQQQ L L
Sbjct: 702 VTDTMFQGRSCWHAHHVNPYTMKDMEPGTI------PNYSQAQQQLLAL 744



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>Y2917_ACIAD (Q6F8I3) UPF0176 protein ACIAD2917|
          Length = 314

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = +1

Query: 211 QNQKCSDASV*VTQDECPTSRRSHGDECAYCILEKTT 321
           QN KC      +T +E       HG  C YCI EKTT
Sbjct: 257 QNVKCHACGWPLTPEEVALPSYEHGVSCVYCI-EKTT 292


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,962,659
Number of Sequences: 219361
Number of extensions: 1128114
Number of successful extensions: 2261
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2253
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7932903580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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