ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd26o18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY108805.1| Zea mays PCO077883 mRNA sequence Length = 2049 Score = 385 bits (194), Expect = e-103 Identities = 459/545 (84%), Gaps = 2/545 (0%) Strand = Plus / Minus Query: 168 cgccggggttgggagctccggcagtccgctctcgccattcagcacaatgactttcccctc 227 |||||| |||| ||||||||| | |||| || ||||| ||||||| || |||||||| Sbjct: 1893 cgccggagttgagagctccggtatgccgccctgaccattgagcacaacaaccttcccctc 1834 Query: 228 cgagtccacatcaacaatcacagagtcgccctccttgacctccccgcccaaaatcttctc 287 |||||||||||| || || |||||||||||||||| |||||||| | | |||||||| Sbjct: 1833 cgagtccacatctactatggcagagtcgccctcctttacctcccctgcgagcatcttctc 1774 Query: 288 cgcgaggctgtcctccagaagcctcatgatcgccctcctcaatggccgcgctccgtagct 347 || |||||||||||||| ||||||||||| || | ||||| || || || || ||||| Sbjct: 1773 agcaaggctgtcctccagcagcctcatgatggctcgcctcagcgggcgtgcaccatagct 1714 Query: 348 agggttgtacccttcgtccacgacccgctccttgaacttctccgtcacctgcaggttgat 407 ||||||||| ||||||||||| |||||||||||||||||||| ||||| || || ||||| Sbjct: 1713 agggttgtagccttcgtccaccacccgctccttgaacttctcggtcacttgaagattgat 1654 Query: 408 gtccttgctcttcagcctagtgaaa-acctcctgcagcattatgttcgcgatctctttga 466 ||||||| ||||||||| || ||| |||||||| ||||| |||| ||| ||||| |||| Sbjct: 1653 gtccttggccttcagcct-gtcaaagacctcctggagcatgatgtccgctatctccttga 1595 Query: 467 cttccagcttggtcagctgtctgaagacgatcatttcgtcgagacggttgagaaactccg 526 | || |||||||| ||||| ||||| |||||||| || |||||||||||||| ||||| | Sbjct: 1594 cctcgagcttggtaagctgcctgaacacgatcatctcatcgagacggttgaggaactcag 1535 Query: 527 gtcggaagtactgcttcatctcctcgaccaccaagctcttgatcctgccatagctgctgt 586 ||||||| ||||||||||||||||||| |||| |||||||||||||| ||||| |||| Sbjct: 1534 gtcggaaatactgcttcatctcctcgatgaccaggctcttgatcctgctgtagctactgt 1475 Query: 587 ccttctcgtctgagtcgaggtcgaacccaatcttcctccctcccttctcaatcacgctgc 646 ||||||| || ||||| ||||| || || |||||||| || |||||||| || || |||| Sbjct: 1474 ccttctcatcagagtcaaggtcaaatccgatcttccttccacccttctcgatgacactgc 1415 Query: 647 ttccaacatttgatgtcattatcagaagcgtgttcttgaagtccactgttctncccttgc 706 | || |||||||| ||||| ||||| || ||||||||||||||||| || || ||||||| Sbjct: 1414 tccctacatttgaggtcatgatcaggagtgtgttcttgaagtccaccgtccttcccttgc 1355 Query: 707 tgtca 711 ||||| Sbjct: 1354 tgtca 1350
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 367 bits (185), Expect = 3e-98 Identities = 432/512 (84%), Gaps = 2/512 (0%) Strand = Plus / Plus Query: 201 gccattcagcacaatgactttcccctccgagtccacatcaacaatcacagagtcgccctc 260 ||||||||| ||||| || |||||||| || |||||||| ||||| |||| || ||||| Sbjct: 7095126 gccattcagtacaatcaccttcccctcggaatccacatcgacaatggcagaatcaccctc 7095185 Query: 261 cttgacctccccgcccaaaatcttctccgcgaggctgtcctccagaagcctcatgatcgc 320 ||| |||||||| | | |||||||||||||||||||||||||| ||||||||||| || Sbjct: 7095186 cttcacctccccagctagcatcttctccgcgaggctgtcctccaggagcctcatgatggc 7095245 Query: 321 cctcctcaatggccgcgctccgtagctagggttgtacccttcgtccacgacccgctcctt 380 |||||| | |||| ||| || ||||| |||||| | |||||||| |||| |||||||| Sbjct: 7095246 cctccttagcggcctcgcaccatagctcgggttgaagccttcgtcaacgatacgctcctt 7095305 Query: 381 gaacttctccgtcacctgcaggttgatgtccttgctcttcagcctagtgaaa-acctcct 439 ||||||||| || ||||| |||| ||||||||| ||| ||||| || ||| ||||||| Sbjct: 7095306 gaacttctcggtgacctggaggtcaatgtccttggccttgagcct-gtcaaagacctcct 7095364 Query: 440 gcagcattatgttcgcgatctctttgacttccagcttggtcagctgtctgaagacgatca 499 ||||| || | |||||||| ||||| ||||||||||| || || ||||||||||||| Sbjct: 7095365 tgagcatgatctcggcgatctccttgacctccagcttggtgagttgcctgaagacgatca 7095424 Query: 500 tttcgtcgagacggttgagaaactccggtcggaagtactgcttcatctcctcgaccacca 559 | ||||||||||||||||| ||||| || |||||||||||||||||||||||||| || | Sbjct: 7095425 tctcgtcgagacggttgaggaactcggggcggaagtactgcttcatctcctcgacgacaa 7095484 Query: 560 agctcttgatcctgccatagctgctgtccttctcgtctgagtcgaggtcgaacccaatct 619 |||||||||||||| ||||||||||||||||| || | ||||| ||||| || |||| Sbjct: 7095485 ggctcttgatcctgctgtagctgctgtccttctcatcgtaatcgagatcgaaacctatct 7095544 Query: 620 tcctccctcccttctcaatcacgctgcttccaacatttgatgtcattatcagaagcgtgt 679 ||| || |||||||| || ||||||||||| || || || |||||||| ||||| |||| Sbjct: 7095545 tccgaccacccttctcgatgacgctgcttccgacgttcgaagtcattatgagaagtgtgt 7095604 Query: 680 tcttgaagtccactgttctncccttgctgtca 711 ||||||||||||||||||| |||||||||||| Sbjct: 7095605 tcttgaagtccactgttcttcccttgctgtca 7095636
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 367 bits (185), Expect = 3e-98 Identities = 432/512 (84%), Gaps = 2/512 (0%) Strand = Plus / Plus Query: 201 gccattcagcacaatgactttcccctccgagtccacatcaacaatcacagagtcgccctc 260 ||||||||| ||||| || |||||||| || |||||||| ||||| |||| || ||||| Sbjct: 7095005 gccattcagtacaatcaccttcccctcggaatccacatcgacaatggcagaatcaccctc 7095064 Query: 261 cttgacctccccgcccaaaatcttctccgcgaggctgtcctccagaagcctcatgatcgc 320 ||| |||||||| | | |||||||||||||||||||||||||| ||||||||||| || Sbjct: 7095065 cttcacctccccagctagcatcttctccgcgaggctgtcctccaggagcctcatgatggc 7095124 Query: 321 cctcctcaatggccgcgctccgtagctagggttgtacccttcgtccacgacccgctcctt 380 |||||| | |||| ||| || ||||| |||||| | |||||||| |||| |||||||| Sbjct: 7095125 cctccttagcggcctcgcaccatagctcgggttgaagccttcgtcaacgatacgctcctt 7095184 Query: 381 gaacttctccgtcacctgcaggttgatgtccttgctcttcagcctagtgaaa-acctcct 439 ||||||||| || ||||| |||| ||||||||| ||| ||||| || ||| ||||||| Sbjct: 7095185 gaacttctcggtgacctggaggtcaatgtccttggccttgagcct-gtcaaagacctcct 7095243 Query: 440 gcagcattatgttcgcgatctctttgacttccagcttggtcagctgtctgaagacgatca 499 ||||| || | |||||||| ||||| ||||||||||| || || ||||||||||||| Sbjct: 7095244 tgagcatgatctcggcgatctccttgacctccagcttggtgagttgcctgaagacgatca 7095303 Query: 500 tttcgtcgagacggttgagaaactccggtcggaagtactgcttcatctcctcgaccacca 559 | ||||||||||||||||| ||||| || |||||||||||||||||||||||||| || | Sbjct: 7095304 tctcgtcgagacggttgaggaactcggggcggaagtactgcttcatctcctcgacgacaa 7095363 Query: 560 agctcttgatcctgccatagctgctgtccttctcgtctgagtcgaggtcgaacccaatct 619 |||||||||||||| ||||||||||||||||| || | ||||| ||||| || |||| Sbjct: 7095364 ggctcttgatcctgctgtagctgctgtccttctcatcgtaatcgagatcgaaacctatct 7095423 Query: 620 tcctccctcccttctcaatcacgctgcttccaacatttgatgtcattatcagaagcgtgt 679 ||| || |||||||| || ||||||||||| || || || |||||||| ||||| |||| Sbjct: 7095424 tccgaccacccttctcgatgacgctgcttccgacgttcgaagtcattatgagaagtgtgt 7095483 Query: 680 tcttgaagtccactgttctncccttgctgtca 711 ||||||||||||||||||| |||||||||||| Sbjct: 7095484 tcttgaagtccactgttcttcccttgctgtca 7095515
>emb|AL928782.4|CNS08CCC Oryza sativa chromosome 12, . BAC OSJNBb0069I24 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 68450 Score = 367 bits (185), Expect = 3e-98 Identities = 432/512 (84%), Gaps = 2/512 (0%) Strand = Plus / Plus Query: 201 gccattcagcacaatgactttcccctccgagtccacatcaacaatcacagagtcgccctc 260 ||||||||| ||||| || |||||||| || |||||||| ||||| |||| || ||||| Sbjct: 62812 gccattcagtacaatcaccttcccctcggaatccacatcgacaatggcagaatcaccctc 62871 Query: 261 cttgacctccccgcccaaaatcttctccgcgaggctgtcctccagaagcctcatgatcgc 320 ||| |||||||| | | |||||||||||||||||||||||||| ||||||||||| || Sbjct: 62872 cttcacctccccagctagcatcttctccgcgaggctgtcctccaggagcctcatgatggc 62931 Query: 321 cctcctcaatggccgcgctccgtagctagggttgtacccttcgtccacgacccgctcctt 380 |||||| | |||| ||| || ||||| |||||| | |||||||| |||| |||||||| Sbjct: 62932 cctccttagcggcctcgcaccatagctcgggttgaagccttcgtcaacgatacgctcctt 62991 Query: 381 gaacttctccgtcacctgcaggttgatgtccttgctcttcagcctagtgaaa-acctcct 439 ||||||||| || ||||| |||| ||||||||| ||| ||||| || ||| ||||||| Sbjct: 62992 gaacttctcggtgacctggaggtcaatgtccttggccttgagcct-gtcaaagacctcct 63050 Query: 440 gcagcattatgttcgcgatctctttgacttccagcttggtcagctgtctgaagacgatca 499 ||||| || | |||||||| ||||| ||||||||||| || || ||||||||||||| Sbjct: 63051 tgagcatgatctcggcgatctccttgacctccagcttggtgagttgcctgaagacgatca 63110 Query: 500 tttcgtcgagacggttgagaaactccggtcggaagtactgcttcatctcctcgaccacca 559 | ||||||||||||||||| ||||| || |||||||||||||||||||||||||| || | Sbjct: 63111 tctcgtcgagacggttgaggaactcggggcggaagtactgcttcatctcctcgacgacaa 63170 Query: 560 agctcttgatcctgccatagctgctgtccttctcgtctgagtcgaggtcgaacccaatct 619 |||||||||||||| ||||||||||||||||| || | ||||| ||||| || |||| Sbjct: 63171 ggctcttgatcctgctgtagctgctgtccttctcatcgtaatcgagatcgaaacctatct 63230 Query: 620 tcctccctcccttctcaatcacgctgcttccaacatttgatgtcattatcagaagcgtgt 679 ||| || |||||||| || ||||||||||| || || || |||||||| ||||| |||| Sbjct: 63231 tccgaccacccttctcgatgacgctgcttccgacgttcgaagtcattatgagaagtgtgt 63290 Query: 680 tcttgaagtccactgttctncccttgctgtca 711 ||||||||||||||||||| |||||||||||| Sbjct: 63291 tcttgaagtccactgttcttcccttgctgtca 63322
>emb|BX842241.1|CNS0B0PM Oryza sativa chromosome 12, . Partial sequence from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 45687 Score = 367 bits (185), Expect = 3e-98 Identities = 432/512 (84%), Gaps = 2/512 (0%) Strand = Plus / Plus Query: 201 gccattcagcacaatgactttcccctccgagtccacatcaacaatcacagagtcgccctc 260 ||||||||| ||||| || |||||||| || |||||||| ||||| |||| || ||||| Sbjct: 3426 gccattcagtacaatcaccttcccctcggaatccacatcgacaatggcagaatcaccctc 3485 Query: 261 cttgacctccccgcccaaaatcttctccgcgaggctgtcctccagaagcctcatgatcgc 320 ||| |||||||| | | |||||||||||||||||||||||||| ||||||||||| || Sbjct: 3486 cttcacctccccagctagcatcttctccgcgaggctgtcctccaggagcctcatgatggc 3545 Query: 321 cctcctcaatggccgcgctccgtagctagggttgtacccttcgtccacgacccgctcctt 380 |||||| | |||| ||| || ||||| |||||| | |||||||| |||| |||||||| Sbjct: 3546 cctccttagcggcctcgcaccatagctcgggttgaagccttcgtcaacgatacgctcctt 3605 Query: 381 gaacttctccgtcacctgcaggttgatgtccttgctcttcagcctagtgaaa-acctcct 439 ||||||||| || ||||| |||| ||||||||| ||| ||||| || ||| ||||||| Sbjct: 3606 gaacttctcggtgacctggaggtcaatgtccttggccttgagcct-gtcaaagacctcct 3664 Query: 440 gcagcattatgttcgcgatctctttgacttccagcttggtcagctgtctgaagacgatca 499 ||||| || | |||||||| ||||| ||||||||||| || || ||||||||||||| Sbjct: 3665 tgagcatgatctcggcgatctccttgacctccagcttggtgagttgcctgaagacgatca 3724 Query: 500 tttcgtcgagacggttgagaaactccggtcggaagtactgcttcatctcctcgaccacca 559 | ||||||||||||||||| ||||| || |||||||||||||||||||||||||| || | Sbjct: 3725 tctcgtcgagacggttgaggaactcggggcggaagtactgcttcatctcctcgacgacaa 3784 Query: 560 agctcttgatcctgccatagctgctgtccttctcgtctgagtcgaggtcgaacccaatct 619 |||||||||||||| ||||||||||||||||| || | ||||| ||||| || |||| Sbjct: 3785 ggctcttgatcctgctgtagctgctgtccttctcatcgtaatcgagatcgaaacctatct 3844 Query: 620 tcctccctcccttctcaatcacgctgcttccaacatttgatgtcattatcagaagcgtgt 679 ||| || |||||||| || ||||||||||| || || || |||||||| ||||| |||| Sbjct: 3845 tccgaccacccttctcgatgacgctgcttccgacgttcgaagtcattatgagaagtgtgt 3904 Query: 680 tcttgaagtccactgttctncccttgctgtca 711 ||||||||||||||||||| |||||||||||| Sbjct: 3905 tcttgaagtccactgttcttcccttgctgtca 3936
>dbj|AK066153.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058A21, full insert sequence Length = 3088 Score = 347 bits (175), Expect = 3e-92 Identities = 422/502 (84%), Gaps = 2/502 (0%) Strand = Plus / Minus Query: 211 acaatgactttcccctccgagtccacatcaacaatcacagagtcgccctccttgacctcc 270 ||||| || |||||||| || |||||||| ||||| |||| || |||||||| |||||| Sbjct: 2834 acaatcaccttcccctcggaatccacatcgacaatggcagaatcaccctccttcacctcc 2775 Query: 271 ccgcccaaaatcttctccgcgaggctgtcctccagaagcctcatgatcgccctcctcaat 330 || | | |||||||||||||||||||||||||| ||||||||||| |||||||| | Sbjct: 2774 ccagctagcatcttctccgcgaggctgtcctccaggagcctcatgatggccctccttagc 2715 Query: 331 ggccgcgctccgtagctagggttgtacccttcgtccacgacccgctccttgaacttctcc 390 |||| ||| || ||||| |||||| | |||||||| |||| ||||||||||||||||| Sbjct: 2714 ggcctcgcaccatagctcgggttgaagccttcgtcaacgatacgctccttgaacttctcg 2655 Query: 391 gtcacctgcaggttgatgtccttgctcttcagcctagtgaaa-acctcctgcagcattat 449 || ||||| |||| | ||||||| ||| ||||| || ||| ||||||| ||||| || Sbjct: 2654 gtgacctggaggtcaacgtccttggccttgagcct-gtcaaagacctccttgagcatgat 2596 Query: 450 gttcgcgatctctttgacttccagcttggtcagctgtctgaagacgatcatttcgtcgag 509 | |||||||| ||||| ||||||||||| || || |||||||||||||| |||||||| Sbjct: 2595 ctcggcgatctccttgacctccagcttggtgagttgcctgaagacgatcatctcgtcgag 2536 Query: 510 acggttgagaaactccggtcggaagtactgcttcatctcctcgaccaccaagctcttgat 569 ||||||||| ||||| || |||||||||||||||||||||||||| || | ||||||||| Sbjct: 2535 acggttgaggaactcggggcggaagtactgcttcatctcctcgacgacaaggctcttgat 2476 Query: 570 cctgccatagctgctgtccttctcgtctgagtcgaggtcgaacccaatcttcctccctcc 629 ||||| ||||||||||||||||| || | ||||| ||||| || ||||||| || || Sbjct: 2475 cctgctgtagctgctgtccttctcatcgtaatcgagatcgaaacctatcttccgaccacc 2416 Query: 630 cttctcaatcacgctgcttccaacatttgatgtcattatcagaagcgtgttcttgaagtc 689 |||||| || ||||||||||| || || || |||||||| ||||| |||||||||||||| Sbjct: 2415 cttctcgatgacgctgcttccgacgttcgaagtcattatgagaagtgtgttcttgaagtc 2356 Query: 690 cactgttctncccttgctgtca 711 ||||||||| |||||||||||| Sbjct: 2355 cactgttcttcccttgctgtca 2334
>emb|X75328.1|BNCLPA B.napus (Topas) clpA mRNA Length = 2837 Score = 149 bits (75), Expect = 1e-32 Identities = 202/244 (82%), Gaps = 3/244 (1%) Strand = Plus / Minus Query: 466 acttccagcttggtcagctgtctgaagacgatcatttcgtcgagacggttgagaaactcc 525 ||||||| ||| || ||||||||||| | ||||| ||||| || | |||||| |||||| Sbjct: 2302 acttccaacttcgttagctgtctgaacagaatcatctcgtcaagcctgttgaggaactcc 2243 Query: 526 ggtcggaagtactgcttcatctcctcgaccaccaagctcttgatcctgccatagctgctg 585 |||| ||||||||| |||| ||||| | ||| | ||||||||| ||| ||||||||| Sbjct: 2242 ggtctgaagtactgtttcaactcctgggtcacaaggctcttgattctgttgtagctgctg 2183 Query: 586 tccttctcgtctgagtcgaggtcgaacccaatcttcctccctcccttctcaatcacgctg 645 || ||||||| |||| |||||||| ||||| || ||||| ||||||||||| ||| Sbjct: 2182 tctttctcgt---agtccaggtcgaaaccaatgcgtcttcctcctttctcaatcacactg 2126 Query: 646 cttccaacatttgatgtcattatcagaagcgtgttcttgaagtccactgttctncccttg 705 ||||| |||||||||||||| || ||||||||||| ||||||||||||||||| || ||| Sbjct: 2125 cttccgacatttgatgtcatgatgagaagcgtgtttttgaagtccactgttcttcctttg 2066 Query: 706 ctgt 709 |||| Sbjct: 2065 ctgt 2062 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 280 atcttctccgcgaggctgtcctccagaagcctcatgatcgccctcctcaatggccgcgct 339 ||||||||| | | ||| ||||||| ||| |||||||| || |||||||| || | |||| Sbjct: 2488 atcttctcctccatgctatcctccaaaagtctcatgatggctctcctcaacggtctcgct 2429 Query: 340 ccgtagctagggttgtacccttcgtccac 368 || ||||| |||||||| ||||||||||| Sbjct: 2428 ccatagctcgggttgtaaccttcgtccac 2400
>gb|BT009382.1| Triticum aestivum clone wlm96.pk032.n8:fis, full insert mRNA sequence Length = 1205 Score = 139 bits (70), Expect = 1e-29 Identities = 78/81 (96%) Strand = Plus / Minus Query: 630 cttctcaatcacgctgcttccaacatttgatgtcattatcagaagcgtgttcttgaagtc 689 |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1192 cttctcaatcacgctgctcccaacatttgatgtcattatcaggagcgtgttcttgaagtc 1133 Query: 690 cactgttctncccttgctgtc 710 ||||||||| ||||||||||| Sbjct: 1132 cactgttctccccttgctgtc 1112
>ref|XM_472335.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2667 Score = 121 bits (61), Expect = 3e-24 Identities = 159/192 (82%) Strand = Plus / Minus Query: 520 aactccggtcggaagtactgcttcatctcctcgaccaccaagctcttgatcctgccatag 579 ||||| ||||||||||||||||||| ||| || |||||||||||| ||||| ||| Sbjct: 2303 aactcaggtcggaagtactgcttcagctcttcagtcaccaagctcttaatcctattgtag 2244 Query: 580 ctgctgtccttctcgtctgagtcgaggtcgaacccaatcttcctccctcccttctcaatc 639 ||| |||| ||||| || |||| ||||| || |||||||||| |||||||||||||| Sbjct: 2243 ctggtgtctttctcatcatagtcaaggtcaaatccaatcttccgtcctcccttctcaatg 2184 Query: 640 acgctgcttccaacatttgatgtcattatcagaagcgtgttcttgaagtccactgttctn 699 || ||||||||||||||||||||||| |||| || ||||||||||| || || || | Sbjct: 2183 acactgcttccaacatttgatgtcatgatcaacagtgtgttcttgaaatcaacagtccga 2124 Query: 700 cccttgctgtca 711 |||||||||||| Sbjct: 2123 cccttgctgtca 2112 Score = 101 bits (51), Expect = 3e-18 Identities = 156/191 (81%) Strand = Plus / Minus Query: 223 ccctccgagtccacatcaacaatcacagagtcgccctccttgacctccccgcccaaaatc 282 ||||| || |||||||||||||| ||||||| || ||||||||||| || |||| ||| Sbjct: 2600 ccctctgaatccacatcaacaatagcagagtcaccttccttgacctcgccagccaacatc 2541 Query: 283 ttctccgcgaggctgtcctccagaagcctcatgatcgccctcctcaatggccgcgctccg 342 |||||||| | ||||||||||||||||||||| || || | || || |||| || || Sbjct: 2540 ttctccgccaagctgtcctccagaagcctcataatagcacgccgcagaggcctggcacca 2481 Query: 343 tagctagggttgtacccttcgtccacgacccgctccttgaacttctccgtcacctgcagg 402 ||||| |||||||| |||||||| || || | ||| ||||||||| |||||||| ||| Sbjct: 2480 tagcttgggttgtaaccttcgtcgacaactctatcccggaacttctctgtcacctggagg 2421 Query: 403 ttgatgtcctt 413 | ||||||||| Sbjct: 2420 tcgatgtcctt 2410
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 121 bits (61), Expect = 3e-24 Identities = 159/192 (82%) Strand = Plus / Plus Query: 520 aactccggtcggaagtactgcttcatctcctcgaccaccaagctcttgatcctgccatag 579 ||||| ||||||||||||||||||| ||| || |||||||||||| ||||| ||| Sbjct: 19610734 aactcaggtcggaagtactgcttcagctcttcagtcaccaagctcttaatcctattgtag 19610793 Query: 580 ctgctgtccttctcgtctgagtcgaggtcgaacccaatcttcctccctcccttctcaatc 639 ||| |||| ||||| || |||| ||||| || |||||||||| |||||||||||||| Sbjct: 19610794 ctggtgtctttctcatcatagtcaaggtcaaatccaatcttccgtcctcccttctcaatg 19610853 Query: 640 acgctgcttccaacatttgatgtcattatcagaagcgtgttcttgaagtccactgttctn 699 || ||||||||||||||||||||||| |||| || ||||||||||| || || || | Sbjct: 19610854 acactgcttccaacatttgatgtcatgatcaacagtgtgttcttgaaatcaacagtccga 19610913 Query: 700 cccttgctgtca 711 |||||||||||| Sbjct: 19610914 cccttgctgtca 19610925 Score = 101 bits (51), Expect = 3e-18 Identities = 156/191 (81%) Strand = Plus / Plus Query: 223 ccctccgagtccacatcaacaatcacagagtcgccctccttgacctccccgcccaaaatc 282 ||||| || |||||||||||||| ||||||| || ||||||||||| || |||| ||| Sbjct: 19610437 ccctctgaatccacatcaacaatagcagagtcaccttccttgacctcgccagccaacatc 19610496 Query: 283 ttctccgcgaggctgtcctccagaagcctcatgatcgccctcctcaatggccgcgctccg 342 |||||||| | ||||||||||||||||||||| || || | || || |||| || || Sbjct: 19610497 ttctccgccaagctgtcctccagaagcctcataatagcacgccgcagaggcctggcacca 19610556 Query: 343 tagctagggttgtacccttcgtccacgacccgctccttgaacttctccgtcacctgcagg 402 ||||| |||||||| |||||||| || || | ||| ||||||||| |||||||| ||| Sbjct: 19610557 tagcttgggttgtaaccttcgtcgacaactctatcccggaacttctctgtcacctggagg 19610616 Query: 403 ttgatgtcctt 413 | ||||||||| Sbjct: 19610617 tcgatgtcctt 19610627
>dbj|AK058510.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-G07, full insert sequence Length = 1527 Score = 121 bits (61), Expect = 3e-24 Identities = 159/192 (82%) Strand = Plus / Minus Query: 520 aactccggtcggaagtactgcttcatctcctcgaccaccaagctcttgatcctgccatag 579 ||||| ||||||||||||||||||| ||| || |||||||||||| ||||| ||| Sbjct: 853 aactcaggtcggaagtactgcttcagctcttcagtcaccaagctcttaatcctattgtag 794 Query: 580 ctgctgtccttctcgtctgagtcgaggtcgaacccaatcttcctccctcccttctcaatc 639 ||| |||| ||||| || |||| ||||| || |||||||||| |||||||||||||| Sbjct: 793 ctggtgtctttctcatcatagtcaaggtcaaatccaatcttccgtcctcccttctcaatg 734 Query: 640 acgctgcttccaacatttgatgtcattatcagaagcgtgttcttgaagtccactgttctn 699 || ||||||||||||||||||||||| |||| || ||||||||||| || || || | Sbjct: 733 acactgcttccaacatttgatgtcatgatcaacagtgtgttcttgaaatcaacagtccga 674 Query: 700 cccttgctgtca 711 |||||||||||| Sbjct: 673 cccttgctgtca 662 Score = 101 bits (51), Expect = 3e-18 Identities = 156/191 (81%) Strand = Plus / Minus Query: 223 ccctccgagtccacatcaacaatcacagagtcgccctccttgacctccccgcccaaaatc 282 ||||| || |||||||||||||| ||||||| || ||||||||||| || |||| ||| Sbjct: 1150 ccctctgaatccacatcaacaatagcagagtcaccttccttgacctcgccagccaacatc 1091 Query: 283 ttctccgcgaggctgtcctccagaagcctcatgatcgccctcctcaatggccgcgctccg 342 |||||||| | ||||||||||||||||||||| || || | || || |||| || || Sbjct: 1090 ttctccgccaagctgtcctccagaagcctcataatagcacgccgcagaggcctggcacca 1031 Query: 343 tagctagggttgtacccttcgtccacgacccgctccttgaacttctccgtcacctgcagg 402 ||||| |||||||| |||||||| || || | ||| ||||||||| |||||||| ||| Sbjct: 1030 tagcttgggttgtaaccttcgtcgacaactctatcccggaacttctctgtcacctggagg 971 Query: 403 ttgatgtcctt 413 | ||||||||| Sbjct: 970 tcgatgtcctt 960
>emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07, complete sequence Length = 166410 Score = 121 bits (61), Expect = 3e-24 Identities = 159/192 (82%) Strand = Plus / Plus Query: 520 aactccggtcggaagtactgcttcatctcctcgaccaccaagctcttgatcctgccatag 579 ||||| ||||||||||||||||||| ||| || |||||||||||| ||||| ||| Sbjct: 61460 aactcaggtcggaagtactgcttcagctcttcagtcaccaagctcttaatcctattgtag 61519 Query: 580 ctgctgtccttctcgtctgagtcgaggtcgaacccaatcttcctccctcccttctcaatc 639 ||| |||| ||||| || |||| ||||| || |||||||||| |||||||||||||| Sbjct: 61520 ctggtgtctttctcatcatagtcaaggtcaaatccaatcttccgtcctcccttctcaatg 61579 Query: 640 acgctgcttccaacatttgatgtcattatcagaagcgtgttcttgaagtccactgttctn 699 || ||||||||||||||||||||||| |||| || ||||||||||| || || || | Sbjct: 61580 acactgcttccaacatttgatgtcatgatcaacagtgtgttcttgaaatcaacagtccga 61639 Query: 700 cccttgctgtca 711 |||||||||||| Sbjct: 61640 cccttgctgtca 61651 Score = 101 bits (51), Expect = 3e-18 Identities = 156/191 (81%) Strand = Plus / Plus Query: 223 ccctccgagtccacatcaacaatcacagagtcgccctccttgacctccccgcccaaaatc 282 ||||| || |||||||||||||| ||||||| || ||||||||||| || |||| ||| Sbjct: 61163 ccctctgaatccacatcaacaatagcagagtcaccttccttgacctcgccagccaacatc 61222 Query: 283 ttctccgcgaggctgtcctccagaagcctcatgatcgccctcctcaatggccgcgctccg 342 |||||||| | ||||||||||||||||||||| || || | || || |||| || || Sbjct: 61223 ttctccgccaagctgtcctccagaagcctcataatagcacgccgcagaggcctggcacca 61282 Query: 343 tagctagggttgtacccttcgtccacgacccgctccttgaacttctccgtcacctgcagg 402 ||||| |||||||| |||||||| || || | ||| ||||||||| |||||||| ||| Sbjct: 61283 tagcttgggttgtaaccttcgtcgacaactctatcccggaacttctctgtcacctggagg 61342 Query: 403 ttgatgtcctt 413 | ||||||||| Sbjct: 61343 tcgatgtcctt 61353
>dbj|D29692.1|RICYK4 Oryza sativa mRNA, partial homologous to ATP-dependent protease gene Length = 349 Score = 119 bits (60), Expect = 1e-23 Identities = 158/191 (82%) Strand = Plus / Minus Query: 520 aactccggtcggaagtactgcttcatctcctcgaccaccaagctcttgatcctgccatag 579 ||||| ||||||||||||||||||| ||| || |||||||||||| ||||| ||| Sbjct: 191 aactcaggtcggaagtactgcttcagctcttcagtcaccaagctcttaatcctattgtag 132 Query: 580 ctgctgtccttctcgtctgagtcgaggtcgaacccaatcttcctccctcccttctcaatc 639 ||| |||| ||||| || |||| ||||| || |||||||||| |||||||||||||| Sbjct: 131 ctggtgtctttctcatcatagtcaaggtcaaatccaatcttccgtcctcccttctcaatg 72 Query: 640 acgctgcttccaacatttgatgtcattatcagaagcgtgttcttgaagtccactgttctn 699 || ||||||||||||||||||||||| |||| || ||||||||||| || || || | Sbjct: 71 acactgcttccaacatttgatgtcatgatcaacagtgtgttcttgaaatcaacagtccga 12 Query: 700 cccttgctgtc 710 ||||||||||| Sbjct: 11 cccttgctgtc 1
>gb|L09547.1|PEAPCLP Pisum sativum (clone pCLp) nuclear encoded precursor to chloroplast protein mRNA, complete cds Length = 3239 Score = 117 bits (59), Expect = 5e-23 Identities = 79/86 (91%) Strand = Plus / Minus Query: 625 cctcccttctcaatcacgctgcttccaacatttgatgtcattatcagaagcgtgttcttg 684 ||||| ||||||||||| |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 2351 cctcctttctcaatcacactgcttccaacatttgatgtcattataagaagtgtgttcttg 2292 Query: 685 aagtccactgttctncccttgctgtc 710 || ||||| ||||| ||||||||||| Sbjct: 2291 aaatccacagttctacccttgctgtc 2266
>ref|NM_124471.2| Arabidopsis thaliana CLPC; ATP binding / ATPase AT5G50920 (CLPC) mRNA, complete cds Length = 3183 Score = 111 bits (56), Expect = 3e-21 Identities = 202/251 (80%) Strand = Plus / Minus Query: 460 tctttgacttccagcttggtcagctgtctgaagacgatcatttcgtcgagacggttgaga 519 ||||| ||||||||||| || ||||||||||| || ||||| ||||| || | ||| || Sbjct: 2626 tctttcacttccagctttgttagctgtctgaacacaatcatctcgtctagcctgtttagg 2567 Query: 520 aactccggtcggaagtactgcttcatctcctcgaccaccaagctcttgatcctgccatag 579 ||||| |||| |||||| || |||| |||||| || | ||||||||| ||| || Sbjct: 2566 aactcgggtctgaagtattgtttcagctcctctgttacaaggctcttgattctgttgtaa 2507 Query: 580 ctgctgtccttctcgtctgagtcgaggtcgaacccaatcttcctccctcccttctcaatc 639 |||||||| |||||||| |||| | |||||| || || || ||||| ||||||||| Sbjct: 2506 ctgctgtctttctcgtcgtagtctaagtcgaatccgatacgtcttcctcctttctcaatc 2447 Query: 640 acgctgcttccaacatttgatgtcattatcagaagcgtgttcttgaagtccactgttctn 699 ||||||||||| || ||||||||||| || ||||| ||||| |||||||| |||||||| Sbjct: 2446 acgctgcttccgacgtttgatgtcatgatgagaagtgtgtttttgaagtcaactgttctt 2387 Query: 700 cccttgctgtc 710 || |||||||| Sbjct: 2386 cctttgctgtc 2376
>gb|AY102125.1| Arabidopsis thaliana AT5g50920/K3K7_7 mRNA, complete cds Length = 3125 Score = 111 bits (56), Expect = 3e-21 Identities = 202/251 (80%) Strand = Plus / Minus Query: 460 tctttgacttccagcttggtcagctgtctgaagacgatcatttcgtcgagacggttgaga 519 ||||| ||||||||||| || ||||||||||| || ||||| ||||| || | ||| || Sbjct: 2601 tctttcacttccagctttgttagctgtctgaacacaatcatctcgtctagcctgtttagg 2542 Query: 520 aactccggtcggaagtactgcttcatctcctcgaccaccaagctcttgatcctgccatag 579 ||||| |||| |||||| || |||| |||||| || | ||||||||| ||| || Sbjct: 2541 aactcgggtctgaagtattgtttcagctcctctgttacaaggctcttgattctgttgtaa 2482 Query: 580 ctgctgtccttctcgtctgagtcgaggtcgaacccaatcttcctccctcccttctcaatc 639 |||||||| |||||||| |||| | |||||| || || || ||||| ||||||||| Sbjct: 2481 ctgctgtctttctcgtcgtagtctaagtcgaatccgatacgtcttcctcctttctcaatc 2422 Query: 640 acgctgcttccaacatttgatgtcattatcagaagcgtgttcttgaagtccactgttctn 699 ||||||||||| || ||||||||||| || ||||| ||||| |||||||| |||||||| Sbjct: 2421 acgctgcttccgacgtttgatgtcatgatgagaagtgtgtttttgaagtcaactgttctt 2362 Query: 700 cccttgctgtc 710 || |||||||| Sbjct: 2361 cctttgctgtc 2351
>dbj|AK220924.1| Arabidopsis thaliana mRNA for ATP-dependent Clp protease, ATP-binding subunit, complete cds, clone: RAFL22-49-P06 Length = 774 Score = 111 bits (56), Expect = 3e-21 Identities = 202/251 (80%) Strand = Plus / Minus Query: 460 tctttgacttccagcttggtcagctgtctgaagacgatcatttcgtcgagacggttgaga 519 ||||| ||||||||||| || ||||||||||| || ||||| ||||| || | ||| || Sbjct: 258 tctttcacttccagctttgttagctgtctgaacacaatcatctcgtctagcctgtttagg 199 Query: 520 aactccggtcggaagtactgcttcatctcctcgaccaccaagctcttgatcctgccatag 579 ||||| |||| |||||| || |||| |||||| || | ||||||||| ||| || Sbjct: 198 aactcgggtctgaagtattgtttcagctcctctgttacaaggctcttgattctgttgtaa 139 Query: 580 ctgctgtccttctcgtctgagtcgaggtcgaacccaatcttcctccctcccttctcaatc 639 |||||||| |||||||| |||| | |||||| || || || ||||| ||||||||| Sbjct: 138 ctgctgtctttctcgtcgtagtctaagtcgaatccgatacgtcttcctcctttctcaatc 79 Query: 640 acgctgcttccaacatttgatgtcattatcagaagcgtgttcttgaagtccactgttctn 699 ||||||||||| || ||||||||||| || ||||| ||||| |||||||| |||||||| Sbjct: 78 acgctgcttccgacgtttgatgtcatgatgagaagtgtgtttttgaagtcaactgttctt 19 Query: 700 cccttgctgtc 710 || |||||||| Sbjct: 18 cctttgctgtc 8
>emb|BX830850.1|CNS0A0O2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS30ZG04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1161 Score = 111 bits (56), Expect = 3e-21 Identities = 202/251 (80%) Strand = Plus / Minus Query: 460 tctttgacttccagcttggtcagctgtctgaagacgatcatttcgtcgagacggttgaga 519 ||||| ||||||||||| || ||||||||||| || ||||| ||||| || | ||| || Sbjct: 672 tctttcacttccagctttgttagctgtctgaacacaatcatctcgtctagcctgtttagg 613 Query: 520 aactccggtcggaagtactgcttcatctcctcgaccaccaagctcttgatcctgccatag 579 ||||| |||| |||||| || |||| |||||| || | ||||||||| ||| || Sbjct: 612 aactcgggtctgaagtattgtttcagctcctctgttacaaggctcttgattctgttgtaa 553 Query: 580 ctgctgtccttctcgtctgagtcgaggtcgaacccaatcttcctccctcccttctcaatc 639 |||||||| |||||||| |||| | |||||| || || || ||||| ||||||||| Sbjct: 552 ctgctgtctttctcgtcgtagtctaagtcgaatccgatacgtcttcctcctttctcaatc 493 Query: 640 acgctgcttccaacatttgatgtcattatcagaagcgtgttcttgaagtccactgttctn 699 ||||||||||| || ||||||||||| || ||||| ||||| |||||||| |||||||| Sbjct: 492 acgctgcttccgacgtttgatgtcatgatgagaagtgtgtttttgaagtcaactgttctt 433 Query: 700 cccttgctgtc 710 || |||||||| Sbjct: 432 cctttgctgtc 422
>dbj|AB017063.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K3K7 Length = 68726 Score = 111 bits (56), Expect = 3e-21 Identities = 202/251 (80%) Strand = Plus / Plus Query: 460 tctttgacttccagcttggtcagctgtctgaagacgatcatttcgtcgagacggttgaga 519 ||||| ||||||||||| || ||||||||||| || ||||| ||||| || | ||| || Sbjct: 18518 tctttcacttccagctttgttagctgtctgaacacaatcatctcgtctagcctgtttagg 18577 Query: 520 aactccggtcggaagtactgcttcatctcctcgaccaccaagctcttgatcctgccatag 579 ||||| |||| |||||| || |||| |||||| || | ||||||||| ||| || Sbjct: 18578 aactcgggtctgaagtattgtttcagctcctctgttacaaggctcttgattctgttgtaa 18637 Query: 580 ctgctgtccttctcgtctgagtcgaggtcgaacccaatcttcctccctcccttctcaatc 639 |||||||| |||||||| |||| | |||||| || || || ||||| ||||||||| Sbjct: 18638 ctgctgtctttctcgtcgtagtctaagtcgaatccgatacgtcttcctcctttctcaatc 18697 Query: 640 acgctgcttccaacatttgatgtcattatcagaagcgtgttcttgaagtccactgttctn 699 ||||||||||| || ||||||||||| || ||||| ||||| |||||||| |||||||| Sbjct: 18698 acgctgcttccgacgtttgatgtcatgatgagaagtgtgtttttgaagtcaactgttctt 18757 Query: 700 cccttgctgtc 710 || |||||||| Sbjct: 18758 cctttgctgtc 18768
>gb|AC126794.15| Medicago truncatula clone mth2-24j7, complete sequence Length = 129513 Score = 109 bits (55), Expect = 1e-20 Identities = 126/150 (84%) Strand = Plus / Plus Query: 555 caccaagctcttgatcctgccatagctgctgtccttctcgtctgagtcgaggtcgaaccc 614 ||||||||||||||| ||| ||| |||||||||||||| || |||| ||||| || || Sbjct: 36329 caccaagctcttgattctgttataactgctgtccttctcatcatagtcaaggtcaaatcc 36388 Query: 615 aatcttcctccctcccttctcaatcacgctgcttccaacatttgatgtcattatcagaag 674 || | ||||| ||||| ||||| |||||||||||||||||||||||||| ||||| Sbjct: 36389 tatgcgacggcctcctttctcgatcacactgcttccaacatttgatgtcattataagaag 36448 Query: 675 cgtgttcttgaagtccactgttctnccctt 704 ||||||||||||||||| ||||| ||||| Sbjct: 36449 tgtgttcttgaagtccacagttcttccctt 36478
>dbj|AP006392.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT39E03, TM0266, complete sequence Length = 113459 Score = 109 bits (55), Expect = 1e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 625 cctcccttctcaatcacgctgcttccaacatttgatgtcattatcagaagcgtgttcttg 684 ||||| ||||||||||||||||||||||| || ||||||||||| ||||| ||||||||| Sbjct: 113070 cctcctttctcaatcacgctgcttccaacgttcgatgtcattataagaagggtgttcttg 113129 Query: 685 aagtccactgttctncccttgctgtc 710 |||||||| ||||| ||||| ||||| Sbjct: 113130 aagtccacagttctccccttactgtc 113155
>dbj|AP006098.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10G08, TM0175, complete sequence Length = 108582 Score = 109 bits (55), Expect = 1e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 625 cctcccttctcaatcacgctgcttccaacatttgatgtcattatcagaagcgtgttcttg 684 ||||| ||||||||||||||||||||||| || ||||||||||| ||||| ||||||||| Sbjct: 64061 cctcctttctcaatcacgctgcttccaacgttcgatgtcattataagaagggtgttcttg 64120 Query: 685 aagtccactgttctncccttgctgtc 710 |||||||| ||||| ||||| ||||| Sbjct: 64121 aagtccacagttctccccttactgtc 64146
>gb|AF022909.1| Arabidopsis thaliana ClpC mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 2912 Score = 103 bits (52), Expect = 8e-19 Identities = 201/251 (80%) Strand = Plus / Minus Query: 460 tctttgacttccagcttggtcagctgtctgaagacgatcatttcgtcgagacggttgaga 519 ||||| ||||||||||| || ||||||||||| || ||||| ||||| || | ||| || Sbjct: 2574 tctttcacttccagctttgttagctgtctgaacacaatcatctcgtctagcctgtttagg 2515 Query: 520 aactccggtcggaagtactgcttcatctcctcgaccaccaagctcttgatcctgccatag 579 ||||| |||| ||| || || |||| |||||| || | ||||||||| ||| || Sbjct: 2514 aactcgggtctgaaatattgtttcagctcctctgttacaaggctcttgattctgttgtaa 2455 Query: 580 ctgctgtccttctcgtctgagtcgaggtcgaacccaatcttcctccctcccttctcaatc 639 |||||||| |||||||| |||| | |||||| || || || ||||| ||||||||| Sbjct: 2454 ctgctgtctttctcgtcgtagtctaagtcgaatccgatacgtcttcctcctttctcaatc 2395 Query: 640 acgctgcttccaacatttgatgtcattatcagaagcgtgttcttgaagtccactgttctn 699 ||||||||||| || ||||||||||| || ||||| ||||| |||||||| |||||||| Sbjct: 2394 acgctgcttccgacgtttgatgtcatgatgagaagtgtgtttttgaagtcaactgttctt 2335 Query: 700 cccttgctgtc 710 || |||||||| Sbjct: 2334 cctttgctgtc 2324
>gb|M32604.1|TOMCD4B Tomato ATP-dependent protease (CD4B) gene, complete cds Length = 5846 Score = 81.8 bits (41), Expect = 3e-12 Identities = 70/80 (87%) Strand = Plus / Minus Query: 631 ttctcaatcacgctgcttccaacatttgatgtcattatcagaagcgtgttcttgaagtcc 690 |||||||| || || |||||||||||||||||||| || ||||| ||||||||||| || Sbjct: 5057 ttctcaattacactacttccaacatttgatgtcatgatgagaagtgtgttcttgaaatct 4998 Query: 691 actgttctncccttgctgtc 710 || ||||| ||||||||||| Sbjct: 4997 acagttctacccttgctgtc 4978
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 454 gcgatctctttgacttccagcttggtcagctgtctgaagacgatcatttcgtcgagacgg 513 ||||| ||||||||||| |||| | ||||| | ||||||||| ||||||||||||||| Sbjct: 1364633 gcgatttctttgacttcttccttgttgagctgacagaagacgatgatttcgtcgagacgg 1364574 Query: 514 ttgagaaactccggtcggaagtactgcttca 544 || |||||||| || |||||||| ||||||| Sbjct: 1364573 ttcagaaactcaggacggaagtattgcttca 1364543
>gb|U16134.1|SSU16134 Synechococcus sp. Clp protease putative regulatory subunit (clpC) gene, complete cds Length = 2935 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 454 gcgatctctttgacttccagcttggtcagctgtctgaagacgatcatttcgtcgagacgg 513 ||||| ||||||||||| |||| | ||||| | ||||||||| ||||||||||||||| Sbjct: 2529 gcgatttctttgacttcttccttgttgagctgacggaagacgatgatttcgtcgagacgg 2470 Query: 514 ttgagaaactccggtcggaagtactgcttca 544 || |||||||| || |||||||| ||||||| Sbjct: 2469 ttcagaaactcaggacggaagtattgcttca 2439
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 454 gcgatctctttgacttccagcttggtcagctgtctgaagacgatcatttcgtcgagacgg 513 ||||| ||||||||||| |||| | ||||| | ||||||||| ||||||||||||||| Sbjct: 256250 gcgatttctttgacttcttccttgttgagctgacggaagacgatgatttcgtcgagacgg 256309 Query: 514 ttgagaaactccggtcggaagtactgcttca 544 || |||||||| || |||||||| ||||||| Sbjct: 256310 ttcagaaactcaggacggaagtattgcttca 256340
>gb|AC138005.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0038O16, complete sequence Length = 37350 Score = 73.8 bits (37), Expect = 7e-10 Identities = 97/117 (82%) Strand = Plus / Plus Query: 454 gcgatctctttgacttccagcttggtcagctgtctgaagacgatcatttcgtcgagacgg 513 |||||||| || || |||||||| |||||||| | ||| |||||||| ||||| || ||| Sbjct: 6134 gcgatctccttcacctccagcttcgtcagctgccggaacacgatcatctcgtccagccgg 6193 Query: 514 ttgagaaactccggtcggaagtactgcttcatctcctcgaccaccaagctcttgatc 570 || || |||||||| | |||||| ||||||||||||| |||||| | |||||||| Sbjct: 6194 ttcaggaactccggcctgaagtagcgcttcatctcctcctccaccatgttcttgatc 6250 Score = 60.0 bits (30), Expect = 1e-05 Identities = 87/106 (82%) Strand = Plus / Plus Query: 296 tgtcctccagaagcctcatgatcgccctcctcaatggccgcgctccgtagctagggttgt 355 |||||||||| |||| |||||| |||| | || |||||||| |||||||| |||| | Sbjct: 5976 tgtcctccagcagccgcatgatggcccggcgcagcggccgcgcgccgtagctcgggtcga 6035 Query: 356 acccttcgtccacgacccgctccttgaacttctccgtcacctgcag 401 | |||| || ||||| ||||||||||| |||||||||||||||| Sbjct: 6036 agccttgctcgacgacgagctccttgaacctctccgtcacctgcag 6081 Score = 48.1 bits (24), Expect = 0.040 Identities = 83/103 (80%) Strand = Plus / Plus Query: 608 cgaacccaatcttcctccctcccttctcaatcacgctgcttccaacatttgatgtcatta 667 ||||||| | || |||||| |||||||| || |||| ||| || || || |||||||| | Sbjct: 6285 cgaacccgagctgcctcccgcccttctcgatgacgccgctgccgacgttggatgtcatga 6344 Query: 668 tcagaagcgtgttcttgaagtccactgttctncccttgctgtc 710 | | |||| ||||||||| ||||| || || ||||||||||| Sbjct: 6345 tgatgagcgagttcttgaaatccaccgtcctccccttgctgtc 6387
>gb|AC138002.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0011I07 map S10207, complete sequence Length = 123847 Score = 73.8 bits (37), Expect = 7e-10 Identities = 97/117 (82%) Strand = Plus / Plus Query: 454 gcgatctctttgacttccagcttggtcagctgtctgaagacgatcatttcgtcgagacgg 513 |||||||| || || |||||||| |||||||| | ||| |||||||| ||||| || ||| Sbjct: 103518 gcgatctccttcacctccagcttcgtcagctgccggaacacgatcatctcgtccagccgg 103577 Query: 514 ttgagaaactccggtcggaagtactgcttcatctcctcgaccaccaagctcttgatc 570 || || |||||||| | |||||| ||||||||||||| |||||| | |||||||| Sbjct: 103578 ttcaggaactccggcctgaagtagcgcttcatctcctcctccaccatgttcttgatc 103634 Score = 60.0 bits (30), Expect = 1e-05 Identities = 87/106 (82%) Strand = Plus / Plus Query: 296 tgtcctccagaagcctcatgatcgccctcctcaatggccgcgctccgtagctagggttgt 355 |||||||||| |||| |||||| |||| | || |||||||| |||||||| |||| | Sbjct: 103360 tgtcctccagcagccgcatgatggcccggcgcagcggccgcgcgccgtagctcgggtcga 103419 Query: 356 acccttcgtccacgacccgctccttgaacttctccgtcacctgcag 401 | |||| || ||||| ||||||||||| |||||||||||||||| Sbjct: 103420 agccttgctcgacgacgagctccttgaacctctccgtcacctgcag 103465 Score = 48.1 bits (24), Expect = 0.040 Identities = 83/103 (80%) Strand = Plus / Plus Query: 608 cgaacccaatcttcctccctcccttctcaatcacgctgcttccaacatttgatgtcatta 667 ||||||| | || |||||| |||||||| || |||| ||| || || || |||||||| | Sbjct: 103669 cgaacccgagctgcctcccgcccttctcgatgacgccgctgccgacgttggatgtcatga 103728 Query: 668 tcagaagcgtgttcttgaagtccactgttctncccttgctgtc 710 | | |||| ||||||||| ||||| || || ||||||||||| Sbjct: 103729 tgatgagcgagttcttgaaatccaccgtcctccccttgctgtc 103771
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 73.8 bits (37), Expect = 7e-10 Identities = 97/117 (82%) Strand = Plus / Plus Query: 454 gcgatctctttgacttccagcttggtcagctgtctgaagacgatcatttcgtcgagacgg 513 |||||||| || || |||||||| |||||||| | ||| |||||||| ||||| || ||| Sbjct: 9094944 gcgatctccttcacctccagcttcgtcagctgccggaacacgatcatctcgtccagccgg 9095003 Query: 514 ttgagaaactccggtcggaagtactgcttcatctcctcgaccaccaagctcttgatc 570 || || |||||||| | |||||| ||||||||||||| |||||| | |||||||| Sbjct: 9095004 ttcaggaactccggcctgaagtagcgcttcatctcctcctccaccatgttcttgatc 9095060 Score = 71.9 bits (36), Expect = 3e-09 Identities = 105/128 (82%) Strand = Plus / Plus Query: 280 atcttctccgcgaggctgtcctccagaagcctcatgatcgccctcctcaatggccgcgct 339 ||||||||||||||| |||||||||| |||| || || |||| ||||| |||| ||| Sbjct: 9198113 atcttctccgcgagggtgtcctccagcagccgcacgacggcccgcctcagcggcctcgcg 9198172 Query: 340 ccgtagctagggttgtacccttcgtccacgacccgctccttgaacttctccgtcacctgc 399 |||||||| |||| | | || || |||||||| ||||| ||||||| |||||||||| | Sbjct: 9198173 ccgtagctcgggtcgaatccctcctccacgacgagctccctgaacttgtccgtcaccttc 9198232 Query: 400 aggttgat 407 || ||||| Sbjct: 9198233 agcttgat 9198240 Score = 60.0 bits (30), Expect = 1e-05 Identities = 87/106 (82%) Strand = Plus / Plus Query: 296 tgtcctccagaagcctcatgatcgccctcctcaatggccgcgctccgtagctagggttgt 355 |||||||||| |||| |||||| |||| | || |||||||| |||||||| |||| | Sbjct: 9094786 tgtcctccagcagccgcatgatggcccggcgcagcggccgcgcgccgtagctcgggtcga 9094845 Query: 356 acccttcgtccacgacccgctccttgaacttctccgtcacctgcag 401 | |||| || ||||| ||||||||||| |||||||||||||||| Sbjct: 9094846 agccttgctcgacgacgagctccttgaacctctccgtcacctgcag 9094891 Score = 48.1 bits (24), Expect = 0.040 Identities = 83/103 (80%) Strand = Plus / Plus Query: 608 cgaacccaatcttcctccctcccttctcaatcacgctgcttccaacatttgatgtcatta 667 ||||||| | || |||||| |||||||| || |||| ||| || || || |||||||| | Sbjct: 9095095 cgaacccgagctgcctcccgcccttctcgatgacgccgctgccgacgttggatgtcatga 9095154 Query: 668 tcagaagcgtgttcttgaagtccactgttctncccttgctgtc 710 | | |||| ||||||||| ||||| || || ||||||||||| Sbjct: 9095155 tgatgagcgagttcttgaaatccaccgtcctccccttgctgtc 9095197 Score = 42.1 bits (21), Expect = 2.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 673 agcgtgttcttgaagtccactgttctnccctt 704 |||||||||||||||||||| || || ||||| Sbjct: 9198479 agcgtgttcttgaagtccaccgtcctcccctt 9198510
>dbj|AK100126.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008I20, full insert sequence Length = 3229 Score = 73.8 bits (37), Expect = 7e-10 Identities = 97/117 (82%) Strand = Plus / Minus Query: 454 gcgatctctttgacttccagcttggtcagctgtctgaagacgatcatttcgtcgagacgg 513 |||||||| || || |||||||| |||||||| | ||| |||||||| ||||| || ||| Sbjct: 2662 gcgatctccttcacctccagcttcgtcagctgccggaacacgatcatctcgtccagccgg 2603 Query: 514 ttgagaaactccggtcggaagtactgcttcatctcctcgaccaccaagctcttgatc 570 || || |||||||| | |||||| ||||||||||||| |||||| | |||||||| Sbjct: 2602 ttcaggaactccggcctgaagtagcgcttcatctcctcctccaccatgttcttgatc 2546 Score = 60.0 bits (30), Expect = 1e-05 Identities = 87/106 (82%) Strand = Plus / Minus Query: 296 tgtcctccagaagcctcatgatcgccctcctcaatggccgcgctccgtagctagggttgt 355 |||||||||| |||| |||||| |||| | || |||||||| |||||||| |||| | Sbjct: 2820 tgtcctccagcagccgcatgatggcccggcgcagcggccgcgcgccgtagctcgggtcga 2761 Query: 356 acccttcgtccacgacccgctccttgaacttctccgtcacctgcag 401 | |||| || ||||| ||||||||||| |||||||||||||||| Sbjct: 2760 agccttgctcgacgacgagctccttgaacctctccgtcacctgcag 2715 Score = 48.1 bits (24), Expect = 0.040 Identities = 83/103 (80%) Strand = Plus / Minus Query: 608 cgaacccaatcttcctccctcccttctcaatcacgctgcttccaacatttgatgtcatta 667 ||||||| | || |||||| |||||||| || |||| ||| || || || |||||||| | Sbjct: 2511 cgaacccgagctgcctcccgcccttctcgatgacgccgctgccgacgttggatgtcatga 2452 Query: 668 tcagaagcgtgttcttgaagtccactgttctncccttgctgtc 710 | | |||| ||||||||| ||||| || || ||||||||||| Sbjct: 2451 tgatgagcgagttcttgaaatccaccgtcctccccttgctgtc 2409
>dbj|AK069552.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023N03, full insert sequence Length = 3226 Score = 73.8 bits (37), Expect = 7e-10 Identities = 97/117 (82%) Strand = Plus / Minus Query: 454 gcgatctctttgacttccagcttggtcagctgtctgaagacgatcatttcgtcgagacgg 513 |||||||| || || |||||||| |||||||| | ||| |||||||| ||||| || ||| Sbjct: 2654 gcgatctccttcacctccagcttcgtcagctgccggaacacgatcatctcgtccagccgg 2595 Query: 514 ttgagaaactccggtcggaagtactgcttcatctcctcgaccaccaagctcttgatc 570 || || |||||||| | |||||| ||||||||||||| |||||| | |||||||| Sbjct: 2594 ttcaggaactccggcctgaagtagcgcttcatctcctcctccaccatgttcttgatc 2538 Score = 60.0 bits (30), Expect = 1e-05 Identities = 87/106 (82%) Strand = Plus / Minus Query: 296 tgtcctccagaagcctcatgatcgccctcctcaatggccgcgctccgtagctagggttgt 355 |||||||||| |||| |||||| |||| | || |||||||| |||||||| |||| | Sbjct: 2812 tgtcctccagcagccgcatgatggcccggcgcagcggccgcgcgccgtagctcgggtcga 2753 Query: 356 acccttcgtccacgacccgctccttgaacttctccgtcacctgcag 401 | |||| || ||||| ||||||||||| |||||||||||||||| Sbjct: 2752 agccttgctcgacgacgagctccttgaacctctccgtcacctgcag 2707 Score = 48.1 bits (24), Expect = 0.040 Identities = 83/103 (80%) Strand = Plus / Minus Query: 608 cgaacccaatcttcctccctcccttctcaatcacgctgcttccaacatttgatgtcatta 667 ||||||| | || |||||| |||||||| || |||| ||| || || || |||||||| | Sbjct: 2503 cgaacccgagctgcctcccgcccttctcgatgacgccgctgccgacgttggatgtcatga 2444 Query: 668 tcagaagcgtgttcttgaagtccactgttctncccttgctgtc 710 | | |||| ||||||||| ||||| || || ||||||||||| Sbjct: 2443 tgatgagcgagttcttgaaatccaccgtcctccccttgctgtc 2401
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 73.8 bits (37), Expect = 7e-10 Identities = 97/117 (82%) Strand = Plus / Plus Query: 454 gcgatctctttgacttccagcttggtcagctgtctgaagacgatcatttcgtcgagacgg 513 |||||||| || || |||||||| |||||||| | ||| |||||||| ||||| || ||| Sbjct: 9166641 gcgatctccttcacctccagcttcgtcagctgccggaacacgatcatctcgtccagccgg 9166700 Query: 514 ttgagaaactccggtcggaagtactgcttcatctcctcgaccaccaagctcttgatc 570 || || |||||||| | |||||| ||||||||||||| |||||| | |||||||| Sbjct: 9166701 ttcaggaactccggcctgaagtagcgcttcatctcctcctccaccatgttcttgatc 9166757 Score = 71.9 bits (36), Expect = 3e-09 Identities = 105/128 (82%) Strand = Plus / Plus Query: 280 atcttctccgcgaggctgtcctccagaagcctcatgatcgccctcctcaatggccgcgct 339 ||||||||||||||| |||||||||| |||| || || |||| ||||| |||| ||| Sbjct: 9269810 atcttctccgcgagggtgtcctccagcagccgcacgacggcccgcctcagcggcctcgcg 9269869 Query: 340 ccgtagctagggttgtacccttcgtccacgacccgctccttgaacttctccgtcacctgc 399 |||||||| |||| | | || || |||||||| ||||| ||||||| |||||||||| | Sbjct: 9269870 ccgtagctcgggtcgaatccctcctccacgacgagctccctgaacttgtccgtcaccttc 9269929 Query: 400 aggttgat 407 || ||||| Sbjct: 9269930 agcttgat 9269937 Score = 60.0 bits (30), Expect = 1e-05 Identities = 87/106 (82%) Strand = Plus / Plus Query: 296 tgtcctccagaagcctcatgatcgccctcctcaatggccgcgctccgtagctagggttgt 355 |||||||||| |||| |||||| |||| | || |||||||| |||||||| |||| | Sbjct: 9166483 tgtcctccagcagccgcatgatggcccggcgcagcggccgcgcgccgtagctcgggtcga 9166542 Query: 356 acccttcgtccacgacccgctccttgaacttctccgtcacctgcag 401 | |||| || ||||| ||||||||||| |||||||||||||||| Sbjct: 9166543 agccttgctcgacgacgagctccttgaacctctccgtcacctgcag 9166588 Score = 48.1 bits (24), Expect = 0.040 Identities = 83/103 (80%) Strand = Plus / Plus Query: 608 cgaacccaatcttcctccctcccttctcaatcacgctgcttccaacatttgatgtcatta 667 ||||||| | || |||||| |||||||| || |||| ||| || || || |||||||| | Sbjct: 9166792 cgaacccgagctgcctcccgcccttctcgatgacgccgctgccgacgttggatgtcatga 9166851 Query: 668 tcagaagcgtgttcttgaagtccactgttctncccttgctgtc 710 | | |||| ||||||||| ||||| || || ||||||||||| Sbjct: 9166852 tgatgagcgagttcttgaaatccaccgtcctccccttgctgtc 9166894 Score = 42.1 bits (21), Expect = 2.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 673 agcgtgttcttgaagtccactgttctnccctt 704 |||||||||||||||||||| || || ||||| Sbjct: 9270176 agcgtgttcttgaagtccaccgtcctcccctt 9270207
>gb|AC135498.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0010M24, complete sequence Length = 164853 Score = 71.9 bits (36), Expect = 3e-09 Identities = 105/128 (82%) Strand = Plus / Minus Query: 280 atcttctccgcgaggctgtcctccagaagcctcatgatcgccctcctcaatggccgcgct 339 ||||||||||||||| |||||||||| |||| || || |||| ||||| |||| ||| Sbjct: 85907 atcttctccgcgagggtgtcctccagcagccgcacgacggcccgcctcagcggcctcgcg 85848 Query: 340 ccgtagctagggttgtacccttcgtccacgacccgctccttgaacttctccgtcacctgc 399 |||||||| |||| | | || || |||||||| ||||| ||||||| |||||||||| | Sbjct: 85847 ccgtagctcgggtcgaatccctcctccacgacgagctccctgaacttgtccgtcaccttc 85788 Query: 400 aggttgat 407 || ||||| Sbjct: 85787 agcttgat 85780 Score = 42.1 bits (21), Expect = 2.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 673 agcgtgttcttgaagtccactgttctnccctt 704 |||||||||||||||||||| || || ||||| Sbjct: 85541 agcgtgttcttgaagtccaccgtcctcccctt 85510
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Minus Query: 474 cttggtcagctgtctgaagacgatcatttcgtcgagacggttgagaaactccggtcggaa 533 ||||||||| || | ||||||||| || ||||| | |||||||| |||||||| ||||| Sbjct: 619794 cttggtcagttgccggaagacgatgatctcgtccacgcggttgaggaactccggacggaa 619735 Query: 534 gtactgcttcatctcctcg 552 ||||||||||| ||||||| Sbjct: 619734 gtactgcttcagctcctcg 619716 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 511 cggttgagaaactccggtcggaagt 535 |||||||| |||||||||||||||| Sbjct: 2623570 cggttgaggaactccggtcggaagt 2623594
>gb|M32603.1|TOMCD4A Tomato ATP-dependent protease (CD4A) gene, complete cds Length = 5429 Score = 69.9 bits (35), Expect = 1e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 625 cctcccttctcaatcacgctgcttccaacatttgatgtcattatcagaagcgtgttcttg 684 ||||| ||||| ||||| |||||||||||||| |||||||| || || || || |||||| Sbjct: 4837 cctcctttctctatcacactgcttccaacattcgatgtcatgatgaggagtgtattcttg 4778 Query: 685 aagtccactgttctncccttgctgtc 710 ||||| || ||||| || |||||||| Sbjct: 4777 aagtcgacagttctgcctttgctgtc 4752
>gb|AF043539.1|AF043539 Spinacia oleracea ClpC protease (clpC) mRNA, chloroplast gene encoding chloroplast protein, complete cds Length = 2992 Score = 65.9 bits (33), Expect = 2e-07 Identities = 107/132 (81%) Strand = Plus / Minus Query: 580 ctgctgtccttctcgtctgagtcgaggtcgaacccaatcttcctccctcccttctcaatc 639 |||||||||||||| || |||| ||||| || || ||| | | ||| || ||||| || Sbjct: 2491 ctgctgtccttctcatcatagtctaggtcaaaacctatcctacgcccacctttctcgatt 2432 Query: 640 acgctgcttccaacatttgatgtcattatcagaagcgtgttcttgaagtccactgttctn 699 || || |||||||||||||||||||| || ||||| ||||||||||| || | || || Sbjct: 2431 acactacttccaacatttgatgtcataataagaagtgtgttcttgaaatcggcagtcctt 2372 Query: 700 cccttgctgtca 711 |||||||||||| Sbjct: 2371 cccttgctgtca 2360 Score = 48.1 bits (24), Expect = 0.040 Identities = 63/76 (82%) Strand = Plus / Minus Query: 298 tcctccagaagcctcatgatcgccctcctcaatggccgcgctccgtagctagggttgtac 357 ||||||||||| ||||| || ||||||||||| || | || || || ||||||||||| Sbjct: 2773 tcctccagaagtctcataatagccctcctcaaaggtctagcaccataactagggttgtag 2714 Query: 358 ccttcgtccacgaccc 373 ||||| ||||| |||| Sbjct: 2713 ccttcatccaccaccc 2698
>ref|NM_114746.2| Arabidopsis thaliana ATCLPC; ATP binding / ATPase/ DNA binding / nuclease/ nucleoside-triphosphatase/ nucleotide binding / protein binding AT3G48870 (ATCLPC) mRNA, complete cds Length = 3130 Score = 63.9 bits (32), Expect = 7e-07 Identities = 61/71 (85%) Strand = Plus / Minus Query: 637 atcacgctgcttccaacatttgatgtcattatcagaagcgtgttcttgaagtccactgtt 696 ||||||||||| || || ||||| ||||| |||||||||||||||||||| || || ||| Sbjct: 2463 atcacgctgctccctacgtttgaagtcatgatcagaagcgtgttcttgaaatcgacagtt 2404 Query: 697 ctncccttgct 707 || || ||||| Sbjct: 2403 cttcctttgct 2393
>emb|AL132963.1|ATT21J18 Arabidopsis thaliana DNA chromosome 3, BAC clone T21J18 Length = 82912 Score = 63.9 bits (32), Expect = 7e-07 Identities = 61/71 (85%) Strand = Plus / Plus Query: 637 atcacgctgcttccaacatttgatgtcattatcagaagcgtgttcttgaagtccactgtt 696 ||||||||||| || || ||||| ||||| |||||||||||||||||||| || || ||| Sbjct: 71304 atcacgctgctccctacgtttgaagtcatgatcagaagcgtgttcttgaaatcgacagtt 71363 Query: 697 ctncccttgct 707 || || ||||| Sbjct: 71364 cttcctttgct 71374
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 63.9 bits (32), Expect = 7e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 474 cttggtcagctgtctgaagacgatcatttcgtcgagacggttgagaaactccggtcggaa 533 ||||||||| || | ||||||||| || ||||| | |||||||| ||||| || ||||| Sbjct: 666391 cttggtcagttgccggaagacgatgatctcgtccacccggttgaggaactcggggcggaa 666332 Query: 534 gtactgcttcatctcctcgaccaccaag 561 ||||||||||| ||||||| ||||||| Sbjct: 666331 gtactgcttcagctcctcgtgcaccaag 666304
>gb|AY056787.1| Arabidopsis thaliana AT3g48870/T21J18_140 mRNA, complete cds Length = 3105 Score = 63.9 bits (32), Expect = 7e-07 Identities = 61/71 (85%) Strand = Plus / Minus Query: 637 atcacgctgcttccaacatttgatgtcattatcagaagcgtgttcttgaagtccactgtt 696 ||||||||||| || || ||||| ||||| |||||||||||||||||||| || || ||| Sbjct: 2464 atcacgctgctccctacgtttgaagtcatgatcagaagcgtgttcttgaaatcgacagtt 2405 Query: 697 ctncccttgct 707 || || ||||| Sbjct: 2404 cttcctttgct 2394
>dbj|AB022324.1| Arabidopsis thaliana mRNA for AtClpC, complete cds Length = 3090 Score = 63.9 bits (32), Expect = 7e-07 Identities = 61/71 (85%) Strand = Plus / Minus Query: 637 atcacgctgcttccaacatttgatgtcattatcagaagcgtgttcttgaagtccactgtt 696 ||||||||||| || || ||||| ||||| |||||||||||||||||||| || || ||| Sbjct: 2448 atcacgctgctccctacgtttgaagtcatgatcagaagcgtgttcttgaaatcgacagtt 2389 Query: 697 ctncccttgct 707 || || ||||| Sbjct: 2388 cttcctttgct 2378
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 61.9 bits (31), Expect = 3e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 489 gaagacgatcatttcgtcgagacggttgagaaactccggtcggaagtactgcttcatctc 548 ||||||||| || ||||||||||||||||| || || || |||||||||||||| | ||| Sbjct: 1496399 gaagacgataatctcgtcgagacggttgaggaattcagggcggaagtactgctttagctc 1496458 Query: 549 ctc 551 ||| Sbjct: 1496459 ctc 1496461
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 61.9 bits (31), Expect = 3e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 466 acttccagcttggtcagctgtctgaagacgatcatttcgtcgagacggttgagaaactcc 525 ||||| |||||| ||| ||| | ||||||||| || ||||| ||||||||||| ||||| Sbjct: 3644559 acttctagcttgctcaactgacggaagacgataatctcgtctagacggttgaggaactca 3644500 Query: 526 ggtcggaagtactgcttca 544 || |||||||| ||||||| Sbjct: 3644499 ggacggaagtattgcttca 3644481 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 675 cgtgttcttgaagtccactgt 695 ||||||||||||||||||||| Sbjct: 6056936 cgtgttcttgaagtccactgt 6056916
>gb|AF053562.1|AF053562 Mesembryanthemum crystallinum ATP-dependent protease mRNA, partial cds Length = 531 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 280 atcttctccgcgaggctgtcctccagaagcctcatgatcgccctcctcaatggccgcgct 339 |||||||| || | ||||||||||||||| ||||| || |||||||||| ||||| || Sbjct: 101 atcttctcggccatgctgtcctccagaagtctcataatagccctcctcagaggccgagca 42 Query: 340 ccgtagctagggttgta 356 || ||||| |||||||| Sbjct: 41 ccatagctggggttgta 25
>emb|BX569691.1| Synechococcus sp. WH8102 complete genome; segment 3/7 Length = 347365 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 493 acgatcatttcgtcgagacggttgagaaactccggtcggaagtactgcttcatctcctc 551 ||||| || |||||||| |||||||| || || || |||||||||||||||| |||||| Sbjct: 202083 acgatgatctcgtcgagccggttgaggaattcagggcggaagtactgcttcagctcctc 202025
>gb|AY837846.1| Bifidobacterium animalis subsp. animalis ATCC 25527 ctA, ClpB (clpB), and FaaH (faaH) genes, complete cds Length = 5198 Score = 48.1 bits (24), Expect = 0.040 Identities = 30/32 (93%) Strand = Plus / Plus Query: 502 tcgtcgagacggttgagaaactccggtcggaa 533 ||||||||||||||||| |||||||| ||||| Sbjct: 1836 tcgtcgagacggttgaggaactccggacggaa 1867 Score = 40.1 bits (20), Expect = 9.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 661 gtcattatcagaagcgtgttcttgaagtccac 692 ||||| ||||| | |||||||||||||||||| Sbjct: 1956 gtcatgatcaggatcgtgttcttgaagtccac 1987
>emb|BX572098.1| Prochlorococcus marinus MIT9313 complete genome; segment 4/7 Length = 346683 Score = 48.1 bits (24), Expect = 0.040 Identities = 42/48 (87%) Strand = Plus / Minus Query: 489 gaagacgatcatttcgtcgagacggttgagaaactccggtcggaagta 536 ||||||||| ||||| ||||||||||| ||||| || || |||||||| Sbjct: 97628 gaagacgataatttcatcgagacggttcagaaattcaggacggaagta 97581 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 679 ttcttgaagtccactgttct 698 |||||||||||||||||||| Sbjct: 97435 ttcttgaagtccactgttct 97416
>gb|AC006159.3|AC006159 Homo sapiens BAC clone CTB-11K1 from 7q22-q32, complete sequence Length = 92125 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 6 tttctttcccctttaattatatg 28 ||||||||||||||||||||||| Sbjct: 6330 tttctttcccctttaattatatg 6308
>emb|AJ133269.1|HSA133269 Homo sapiens caveolin-1/-2 locus, Contig1, D7S522, genes CAV2 (exons 1, 2a, and 2b), CAV1 (exons 1 and 2) Length = 190537 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 6 tttctttcccctttaattatatg 28 ||||||||||||||||||||||| Sbjct: 157974 tttctttcccctttaattatatg 157952
>gb|AC122343.4| Mus musculus BAC clone RP23-359L18 from chromosome 7, complete sequence Length = 228892 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 612 cccaatcttcctccctcccttct 634 ||||||||||||||||||||||| Sbjct: 212285 cccaatcttcctccctcccttct 212307
>gb|AC166834.2| Mus musculus BAC clone RP23-158D24 from chromosome 7, complete sequence Length = 212016 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 612 cccaatcttcctccctcccttct 634 ||||||||||||||||||||||| Sbjct: 98951 cccaatcttcctccctcccttct 98929
>gb|AC157088.2| Pan troglodytes BAC clone CH251-497H13 from chromosome unknown, complete sequence Length = 220527 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 5 ttttctttcccctttaattata 26 |||||||||||||||||||||| Sbjct: 193561 ttttctttcccctttaattata 193540
>emb|AL357374.11| Human DNA sequence from clone RP11-353C18 on chromosome 20 Contains the 5' end of the NFS1 gene for nitrogen fixation 1 (S. cerevisiae), the C20orf52 gene, the RNPC2 gene for RNA-binding region (RNP1, RRM) containing 2, a BXDC1 pseudogene, the 5' end of the C20orf104 gene and three CpG islands, complete sequence Length = 80565 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 5 ttttctttcccctttaattata 26 |||||||||||||||||||||| Sbjct: 37608 ttttctttcccctttaattata 37629
>emb|BX649451.4| Zebrafish DNA sequence from clone DKEY-206M7 in linkage group 10, complete sequence Length = 97299 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 31 tattactgtatattttatacagttac 56 ||||||||||||||||||||| |||| Sbjct: 80111 tattactgtatattttatacatttac 80136
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 44.1 bits (22), Expect = 0.62 Identities = 46/54 (85%) Strand = Plus / Minus Query: 489 gaagacgatcatttcgtcgagacggttgagaaactccggtcggaagtactgctt 542 |||||| || || |||||||| || ||||| ||||| || |||||||||||||| Sbjct: 2217650 gaagacaatgatctcgtcgaggcgattgaggaactcggggcggaagtactgctt 2217597 Score = 44.1 bits (22), Expect = 0.62 Identities = 40/46 (86%) Strand = Plus / Minus Query: 489 gaagacgatcatttcgtcgagacggttgagaaactccggtcggaag 534 ||||||||||| |||||||| |||||||| ||||| || |||||| Sbjct: 1664658 gaagacgatcacctcgtcgaggcggttgaggaactcggggcggaag 1664613
>gb|AC140431.4| Mus musculus BAC clone RP24-172K3 from chromosome 7, complete sequence Length = 172958 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 460 tctttgacttccagcttggtc 480 ||||||||||||||||||||| Sbjct: 11332 tctttgacttccagcttggtc 11352
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 675 cgtgttcttgaagtccactgt 695 ||||||||||||||||||||| Sbjct: 2901155 cgtgttcttgaagtccactgt 2901135 Score = 40.1 bits (20), Expect = 9.7 Identities = 47/56 (83%) Strand = Plus / Plus Query: 489 gaagacgatcatttcgtcgagacggttgagaaactccggtcggaagtactgcttca 544 ||||||||| || || || ||||||||||| || || || |||||||| ||||||| Sbjct: 1102711 gaagacgataatctcatctagacggttgaggaattcaggacggaagtattgcttca 1102766
>gb|AC131706.4| Mus musculus BAC clone RP24-136E12 from chromosome 7, complete sequence Length = 127581 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 460 tctttgacttccagcttggtc 480 ||||||||||||||||||||| Sbjct: 117932 tctttgacttccagcttggtc 117952 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 460 tctttgacttccagcttggtc 480 ||||||||||||||||||||| Sbjct: 95665 tctttgacttccagcttggtc 95685
>emb|CR450771.10| Zebrafish DNA sequence from clone CH211-152D1 in linkage group 2, complete sequence Length = 152893 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 tgaaatgaaaatgctgaattg 123 ||||||||||||||||||||| Sbjct: 132225 tgaaatgaaaatgctgaattg 132245
>gb|AC116479.14| Mus musculus, clone RP23-397F3, complete sequence Length = 225423 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 615 aatcttcctccctcccttctc 635 ||||||||||||||||||||| Sbjct: 68137 aatcttcctccctcccttctc 68117
>gb|DQ423156.2| Lycopersicon peruvianum cultivar LA454 ATP-binding protein (At1g60440) gene, intron Length = 732 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 646 cttccaacatttgatgtcatt 666 ||||||||||||||||||||| Sbjct: 305 cttccaacatttgatgtcatt 285
>ref|XM_504490.1| Yarrowia lipolytica CLIB122, YALI0E27962g predicted mRNA Length = 2664 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 511 cggttgagaaactccggtcggaagt 535 |||||||||||||| |||||||||| Sbjct: 2276 cggttgagaaactcgggtcggaagt 2252
>emb|AL365209.13| Human DNA sequence from clone RP11-174G17 on chromosome 1 Contains 5' end of a novel gene, 5' end of a gene for a novel protein and a CpG island, complete sequence Length = 115291 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 617 tcttcctccctcccttctcaa 637 ||||||||||||||||||||| Sbjct: 59775 tcttcctccctcccttctcaa 59755
>emb|AL158152.18| Human DNA sequence from clone RP11-2B6 on chromosome 9q22.2-31.1 Contains a novel gene and a CpG island, complete sequence Length = 114517 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 617 tcttcctccctcccttctcaa 637 ||||||||||||||||||||| Sbjct: 11957 tcttcctccctcccttctcaa 11937
>gb|AE004483.1| Pseudomonas aeruginosa PAO1, section 44 of 529 of the complete genome Length = 10202 Score = 42.1 bits (21), Expect = 2.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 489 gaagacgatcatttcgtcgagacggttgagaaactccggtcggaa 533 ||||||||||| |||||||| |||||||| || ||||| ||||| Sbjct: 9696 gaagacgatcacctcgtcgaggcggttgaggaattccgggcggaa 9652
>ref|XM_218523.3| PREDICTED: Rattus norvegicus CD22 antigen (predicted) (Cd22_predicted), mRNA Length = 3042 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 245 tcacagagtcgccctccttgacctc 269 ||||||||| ||||||||||||||| Sbjct: 1273 tcacagagttgccctccttgacctc 1249
>emb|BX248318.9| Zebrafish DNA sequence from clone CH211-220M17 in linkage group 11, complete sequence Length = 194209 Score = 42.1 bits (21), Expect = 2.5 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Minus Query: 21 attatatgtgtattactgtatattttatacagt 53 ||||||||||||| ||||||| ||||||||||| Sbjct: 56397 attatatgtgtat-actgtattttttatacagt 56366
>emb|BX004962.10| Zebrafish DNA sequence from clone CH211-93N23, complete sequence Length = 170736 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 gtgtattactgtatattttat 48 ||||||||||||||||||||| Sbjct: 331 gtgtattactgtatattttat 351
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 511 cggttgagaaactccggtcggaagt 535 |||||||||||||| |||||||||| Sbjct: 3309197 cggttgagaaactcgggtcggaagt 3309221
>dbj|AB007966.1| Homo sapiens mRNA, chromosome 1 specific transcript KIAA0497 Length = 6474 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 617 tcttcctccctcccttctcaa 637 ||||||||||||||||||||| Sbjct: 6431 tcttcctccctcccttctcaa 6411
>ref|NM_104123.1| Arabidopsis thaliana cysteine-type endopeptidase/ ubiquitin thiolesterase AT1G52450 mRNA, complete cds Length = 3411 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 644 tgcttccaacatttgatgtc 663 |||||||||||||||||||| Sbjct: 1811 tgcttccaacatttgatgtc 1830
>gb|AC132617.4| Mus musculus BAC clone RP23-230A6 from chromosome 12, complete sequence Length = 239046 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ctttcccctccgagtccaca 237 |||||||||||||||||||| Sbjct: 31244 ctttcccctccgagtccaca 31225
>gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10, complete sequence Length = 153366 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 616 atcttcctccctcccttctcaatc 639 |||||||||||||| ||||||||| Sbjct: 53762 atcttcctccctccgttctcaatc 53785
>gb|AY024299.1| Oryza sativa microsatellite MRG6624 containing (TTAA)X6, closest to marker RM111, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 ttttctttcccctttaatta 24 |||||||||||||||||||| Sbjct: 88 ttttctttcccctttaatta 107
>gb|AC150386.2| Branchiostoma floridae clone CH302-103G16, complete sequence Length = 195926 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 tccttgaacttctccgtcac 395 |||||||||||||||||||| Sbjct: 2257 tccttgaacttctccgtcac 2276
>ref|XM_459941.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0E15180g) partial mRNA Length = 4800 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 677 tgttcttgaagtccactgtt 696 |||||||||||||||||||| Sbjct: 1655 tgttcttgaagtccactgtt 1636
>gb|AC124535.4| Mus musculus BAC clone RP23-331C24 from chromosome 18, complete sequence Length = 206191 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 atgttttctttcccctttaa 21 |||||||||||||||||||| Sbjct: 14697 atgttttctttcccctttaa 14678
>gb|AY837845.1| Bifidobacterium breve UCC 2003 GltRS (gltRS) gene, partial cds; ClpB (clpB) gene, complete cds; and permease gene, partial cds Length = 5579 Score = 40.1 bits (20), Expect = 9.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 661 gtcattatcagaagcgtgttcttgaagtccac 692 ||||| ||||| | |||||||||||||||||| Sbjct: 2047 gtcatgatcaggatcgtgttcttgaagtccac 2078
>gb|AC165311.3| Mus musculus chromosome 18, clone RP23-352F3, complete sequence Length = 174474 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 atgttttctttcccctttaa 21 |||||||||||||||||||| Sbjct: 43174 atgttttctttcccctttaa 43155
>gb|AC163664.3| Mus musculus BAC clone RP23-310P18 from chromosome 14, complete sequence Length = 221930 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 616 atcttcctccctcccttctc 635 |||||||||||||||||||| Sbjct: 8317 atcttcctccctcccttctc 8336
>gb|AC153919.8| Mus musculus 10 BAC RP23-91E23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 264561 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 cctccttgacctccccgccc 276 |||||||||||||||||||| Sbjct: 262803 cctccttgacctccccgccc 262784
>gb|AF178030.3| Homo sapiens chromosome 8 multiple clones map q23.3, complete sequence Length = 310003 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 613 ccaatcttcctccctccctt 632 |||||||||||||||||||| Sbjct: 99479 ccaatcttcctccctccctt 99498
>emb|Z71261.1|CEF21C3 Caenorhabditis elegans Cosmid F21C3, complete sequence Length = 26195 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 tatacagttacaattatata 65 |||||||||||||||||||| Sbjct: 7289 tatacagttacaattatata 7308
>gb|AC125117.4| Mus musculus BAC clone RP24-261P10 from chromosome 14, complete sequence Length = 165313 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 616 atcttcctccctcccttctc 635 |||||||||||||||||||| Sbjct: 113423 atcttcctccctcccttctc 113442
>gb|AC093856.3| Homo sapiens BAC clone RP11-518I12 from 7, complete sequence Length = 205317 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 612 cccaatcttcctccctccct 631 |||||||||||||||||||| Sbjct: 87523 cccaatcttcctccctccct 87542
>gb|AC012085.4| Homo sapiens 12 BAC RP11-887P2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170269 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 617 tcttcctccctcccttctca 636 |||||||||||||||||||| Sbjct: 21914 tcttcctccctcccttctca 21933
>gb|AC159474.9| Mus musculus 10 BAC RP23-28P17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 230201 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 cctccttgacctccccgccc 276 |||||||||||||||||||| Sbjct: 181951 cctccttgacctccccgccc 181932
>emb|AL591592.7| Human DNA sequence from clone RP4-612P1 on chromosome 1, complete sequence Length = 52520 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 617 tcttcctccctcccttctca 636 |||||||||||||||||||| Sbjct: 10577 tcttcctccctcccttctca 10558
>emb|AL596451.4| Human DNA sequence from clone RP11-75C9 on chromosome 9 Contains 2 novel genes, complete sequence Length = 130513 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 gaatgaaatgaaaatgctga 119 |||||||||||||||||||| Sbjct: 96698 gaatgaaatgaaaatgctga 96717
>gb|AC093489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1116_A10, complete sequence Length = 102275 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 616 atcttcctccctcccttctcaatc 639 |||||||||||||| ||||||||| Sbjct: 52602 atcttcctccctccgttctcaatc 52625
>emb|AL121905.23|HSDJ534B8 Human DNA sequence from clone RP4-534B8 on chromosome 20 Contains the 3' end of the PTPRA gene for protein tyrosine phosphatase receptor type A, the GNRH2 gene for gonadotropin-releasing hormone 2, a novel gene and two CpG islands, complete sequence Length = 126679 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 cctcatgatcgccctcctca 328 |||||||||||||||||||| Sbjct: 4562 cctcatgatcgccctcctca 4581
>emb|AL009177.1|HS365E2 Human DNA sequence from clone RP3-365E2 on chromosome 6p22.3-24.1, complete sequence Length = 137730 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 acaatctatctatataccaactac 155 |||||||| ||||||||||||||| Sbjct: 99131 acaatctaactatataccaactac 99154
>emb|CR381700.6| Zebrafish DNA sequence from clone CH211-198F4 in linkage group 14, complete sequence Length = 203630 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 tactgtatattttatacagt 53 |||||||||||||||||||| Sbjct: 196179 tactgtatattttatacagt 196198
>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces hansenii Length = 2037969 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 677 tgttcttgaagtccactgtt 696 |||||||||||||||||||| Sbjct: 1161099 tgttcttgaagtccactgtt 1161118
>emb|BX251412.1| Tropheryma whipplei TW08/27, complete genome; segment 3/3 Length = 302938 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 cctcctcaatggccgcgctccgta 344 |||||||||||||||||| ||||| Sbjct: 231785 cctcctcaatggccgcgcgccgta 231808
>emb|AL844182.10| Mouse DNA sequence from clone RP23-399H17 on chromosome 4, complete sequence Length = 201590 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 ttctttcccctttaattata 26 |||||||||||||||||||| Sbjct: 103335 ttctttcccctttaattata 103316
>gb|AC090340.6| Homo sapiens chromosome 18, clone RP11-714M23, complete sequence Length = 170969 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 136 tctatctatataccaactacttat 159 ||||||||||||| |||||||||| Sbjct: 105274 tctatctatatactaactacttat 105251
>emb|BX005068.13| Zebrafish DNA sequence from clone DKEY-40H17 in linkage group 1, complete sequence Length = 215007 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 tattactgtatattttatac 50 |||||||||||||||||||| Sbjct: 176090 tattactgtatattttatac 176071
>gb|AC108931.4| Homo sapiens BAC clone RP11-284E20 from 4, complete sequence Length = 114175 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 actgtatattttatacagtt 54 |||||||||||||||||||| Sbjct: 35213 actgtatattttatacagtt 35194
>gb|AC112205.2| Homo sapiens chromosome 5 clone RP11-80G7, complete sequence Length = 137376 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 tacctatgaagagatgtgct 98 |||||||||||||||||||| Sbjct: 65211 tacctatgaagagatgtgct 65192
>gb|AC155937.4| Mus musculus 10 BAC RP24-535C14 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 152468 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 cctccttgacctccccgccc 276 |||||||||||||||||||| Sbjct: 118716 cctccttgacctccccgccc 118735
>gb|AC092217.1|AC092217 Drosophila melanogaster, chromosome 2L, region 24D-24E, BAC clone BACR11D14, complete sequence Length = 158347 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 gctggaatgaaatgaaaatg 115 |||||||||||||||||||| Sbjct: 127206 gctggaatgaaatgaaaatg 127225
>ref|NM_059653.3| Caenorhabditis elegans TWiK family of potassium channels family member (twk-1) (twk-1) mRNA, complete cds Length = 1440 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 tatacagttacaattatata 65 |||||||||||||||||||| Sbjct: 674 tatacagttacaattatata 655
>gb|AC008723.8|AC008723 Homo sapiens chromosome 5 clone CTB-95B16, complete sequence Length = 109616 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 tacctatgaagagatgtgct 98 |||||||||||||||||||| Sbjct: 95711 tacctatgaagagatgtgct 95692
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 616 atcttcctccctcccttctcaatc 639 |||||||||||||| ||||||||| Sbjct: 5367088 atcttcctccctccgttctcaatc 5367111
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ttttctttcccctttaatta 24 |||||||||||||||||||| Sbjct: 21006288 ttttctttcccctttaatta 21006269
>gb|AC105054.6| Homo sapiens BAC clone RP11-722I12 from 2, complete sequence Length = 203061 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 tgtgctggaatgaaatgaaa 112 |||||||||||||||||||| Sbjct: 67326 tgtgctggaatgaaatgaaa 67307
>gb|AC079954.18| Homo sapiens 12 BAC RP11-179A1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 158785 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 tattactgtatattttatac 50 |||||||||||||||||||| Sbjct: 134513 tattactgtatattttatac 134532
>gb|AC008062.3| Homo sapiens BAC clone RP11-68L6 from 2, complete sequence Length = 131250 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ggaatgaaatgaaaatgctg 118 |||||||||||||||||||| Sbjct: 106572 ggaatgaaatgaaaatgctg 106553
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 9.7 Identities = 47/56 (83%) Strand = Plus / Minus Query: 489 gaagacgatcatttcgtcgagacggttgagaaactccggtcggaagtactgcttca 544 ||||||||||| ||||||| |||||||| ||||| || ||||||| || ||||| Sbjct: 435610 gaagacgatcacgtcgtcgatgcggttgaggaactcgggccggaagtgcttcttca 435555
>dbj|AP004876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0470G10 Length = 145419 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ttttctttcccctttaatta 24 |||||||||||||||||||| Sbjct: 129760 ttttctttcccctttaatta 129741
>dbj|AP004017.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1008_F08 Length = 105979 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ttttctttcccctttaatta 24 |||||||||||||||||||| Sbjct: 8033 ttttctttcccctttaatta 8014
>gb|U23515.1| Caenorhabditis elegans cosmid R144, complete sequence Length = 38687 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 tgttttctttcccctttaattata 26 |||||||||||| ||||||||||| Sbjct: 7580 tgttttctttccactttaattata 7557
>gb|AC147906.2| Xenopus tropicalis clone CH216-71H3, complete sequence Length = 147503 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 gtattactgtatattttata 49 |||||||||||||||||||| Sbjct: 80011 gtattactgtatattttata 79992
>gb|AE014184.1| Tropheryma whipplei str. Twist, complete genome Length = 927303 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 cctcctcaatggccgcgctccgta 344 |||||||||||||||||| ||||| Sbjct: 856097 cctcctcaatggccgcgcgccgta 856120
>emb|BX548009.4| Zebrafish DNA sequence from clone CH211-237K17 in linkage group 3, complete sequence Length = 128639 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 100 gaatgaaatgaaaatgctgaattg 123 ||||||||||||| |||||||||| Sbjct: 36109 gaatgaaatgaaagtgctgaattg 36132
>emb|CR391939.4| Zebrafish DNA sequence from clone CH211-269G3 in linkage group 18, complete sequence Length = 83565 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 gtattactgtatattttata 49 |||||||||||||||||||| Sbjct: 44066 gtattactgtatattttata 44047
>emb|AL929435.16| Zebrafish DNA sequence from clone CH211-153J24 in linkage group 20, complete sequence Length = 181400 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 19 taattatatgtgtattactgtatatttt 46 ||||||| ||||||||||| |||||||| Sbjct: 34638 taattatgtgtgtattactatatatttt 34611
>gb|AC008016.2|F6D8 Arabidopsis thaliana chromosome 1 BAC F6D8 sequence, complete sequence Length = 117737 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 644 tgcttccaacatttgatgtc 663 |||||||||||||||||||| Sbjct: 101353 tgcttccaacatttgatgtc 101372
>gb|AE003577.4| Drosophila melanogaster chromosome 2L, section 14 of 83 of the complete sequence Length = 290034 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 gctggaatgaaatgaaaatg 115 |||||||||||||||||||| Sbjct: 124401 gctggaatgaaatgaaaatg 124382
>emb|AL133367.4|CNS01DUS Human chromosome 14 DNA sequence BAC R-600F24 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 181652 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 614 caatcttcctccctcccttc 633 |||||||||||||||||||| Sbjct: 103868 caatcttcctccctcccttc 103849
>gb|DQ332898.1| Synthetic construct Saccharomyces cerevisiae clone FLH113431.01X MSR1 gene, complete sequence Length = 1932 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 aaatgctgaattggctgctt 130 |||||||||||||||||||| Sbjct: 767 aaatgctgaattggctgctt 748
>emb|AL596265.12| Mouse DNA sequence from clone RP23-134O19 on chromosome 12, complete sequence Length = 205332 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 ttcctccctcccttctcaat 638 |||||||||||||||||||| Sbjct: 88988 ttcctccctcccttctcaat 88969
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 9.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 488 tgaagacgatcatttcgtcgagacggttgagaaactccgg 527 |||||||||||| |||||||| ||||| || |||||||| Sbjct: 1656830 tgaagacgatcacgtcgtcgagccggttcaggaactccgg 1656869
>gb|AF033001.1|AF033001 Cerebratulus lacteus neural globin gene, complete cds Length = 4019 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 cgcccaaaatcttctccgcg 291 |||||||||||||||||||| Sbjct: 236 cgcccaaaatcttctccgcg 217
>gb|AC164879.2| Mus musculus BAC clone RP23-354H10 from chromosome 14, complete sequence Length = 210602 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 cttaacaatctatctatata 147 |||||||||||||||||||| Sbjct: 111330 cttaacaatctatctatata 111349
>gb|AC004371.1|AC004371 Drosophila melanogaster DNA sequence (P1 DS06482 (D76)), complete sequence Length = 87124 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 gctggaatgaaatgaaaatg 115 |||||||||||||||||||| Sbjct: 34631 gctggaatgaaatgaaaatg 34612
>gb|AC003971.1|AC003971 Human BAC 367D17 from chromosome 18, complete sequence Length = 87978 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 136 tctatctatataccaactacttat 159 ||||||||||||| |||||||||| Sbjct: 4425 tctatctatatactaactacttat 4402
>gb|AC147545.3| Mus musculus BAC clone RP23-355L20 from 14, complete sequence Length = 211446 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 616 atcttcctccctcccttctc 635 |||||||||||||||||||| Sbjct: 131073 atcttcctccctcccttctc 131054
>gb|U00060.1|YSCH9332 Saccharomyces cerevisiae chromosome VIII cosmid 9332 Length = 36176 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 aaatgctgaattggctgctt 130 |||||||||||||||||||| Sbjct: 8131 aaatgctgaattggctgctt 8150
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 40.1 bits (20), Expect = 9.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 661 gtcattatcagaagcgtgttcttgaagtccac 692 ||||| ||||| | |||||||||||||||||| Sbjct: 1857812 gtcataatcaggatcgtgttcttgaagtccac 1857781
>emb|AL161980.1|HSM802581 Homo sapiens mRNA; cDNA DKFZp761H1023 (from clone DKFZp761H1023) Length = 5680 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 617 tcttcctccctcccttctca 636 |||||||||||||||||||| Sbjct: 1040 tcttcctccctcccttctca 1059
>gb|L39019.1|YSCMSR1A Saccharomyces cerevisiae nuclear-encoded mitochondrial arginyl-tRNA synthetase (MSR1) gene, complete cds Length = 2070 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 aaatgctgaattggctgctt 130 |||||||||||||||||||| Sbjct: 896 aaatgctgaattggctgctt 877
>gb|AC151981.3| Mus musculus BAC clone RP24-66K3 from chromosome 12, complete sequence Length = 185710 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ctttcccctccgagtccaca 237 |||||||||||||||||||| Sbjct: 120624 ctttcccctccgagtccaca 120605
>gb|M31583.1|HUMHYPGA Human hypervariable fragment g Length = 1668 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 612 cccaatcttcctccctccct 631 |||||||||||||||||||| Sbjct: 253 cccaatcttcctccctccct 234 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,202,538 Number of Sequences: 3902068 Number of extensions: 7202538 Number of successful extensions: 178617 Number of sequences better than 10.0: 136 Number of HSP's better than 10.0 without gapping: 136 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 177538 Number of HSP's gapped (non-prelim): 1070 length of query: 711 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 688 effective length of database: 17,143,297,704 effective search space: 11794588820352 effective search space used: 11794588820352 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
