ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd26o16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1STS_HUMAN (P08842) Steryl-sulfatase precursor (EC 3.1.6.2) (Ster... 32 1.6
2EXP14_ARATH (Q9FMA0) Putative alpha-expansin 14 precursor (AtEXP... 31 3.6
3STS_RAT (P15589) Steryl-sulfatase precursor (EC 3.1.6.2) (Steroi... 30 6.1

>STS_HUMAN (P08842) Steryl-sulfatase precursor (EC 3.1.6.2) (Steroid|
           sulfatase) (Steryl-sulfate sulfohydrolase)
           (Arylsulfatase C) (ASC)
          Length = 583

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 55  QKNEHDRCLFSSMVYTNTLAWHPSNNSGTWK 147
           Q+++H+        Y N + WHP N++  WK
Sbjct: 435 QRSDHEFLFHYCNAYLNAVRWHPQNSTSIWK 465



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>EXP14_ARATH (Q9FMA0) Putative alpha-expansin 14 precursor (AtEXPA14) (At-EXP14)|
           (AtEx14) (Ath-ExpAlpha-1.5)
          Length = 255

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
 Frame = +1

Query: 10  VFHVSEGCQQCCTLRQKNEHDRCLFSSMVYTNTLAWHPS----NNSGTWKICK*-QHHIY 174
           +F+  + C  C  ++  ++   C+  ++  T T    P+    NN+G W  C   QHH  
Sbjct: 71  LFNGGQSCGACFQIKCVDDPKWCIGGTITVTGTNFCPPNFAQANNAGGW--CNPPQHHFD 128

Query: 175 IQVDMHAPSLQLKQGVPPVQ 234
           +   +     Q K GV PVQ
Sbjct: 129 LAQPIFLRIAQYKAGVVPVQ 148



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>STS_RAT (P15589) Steryl-sulfatase precursor (EC 3.1.6.2) (Steroid|
           sulfatase) (Steryl-sulfate sulfohydrolase)
           (Arylsulfatase C) (ASC)
          Length = 577

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 55  QKNEHDRCLFSSMVYTNTLAWHPSNNSGTWK 147
           Q +EH+        Y + +AW P N+S  WK
Sbjct: 434 QHSEHEFLFHYCNAYLSAVAWRPHNSSSVWK 464


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,539,361
Number of Sequences: 219361
Number of extensions: 1955435
Number of successful extensions: 5373
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5373
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5995743495
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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