ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd27d12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 88 4e-14
2gb|AC104473.2| Oryza sativa (japonica cultivar-group) chromosome... 88 4e-14
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
4dbj|AK103846.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 4e-14
5dbj|AK063571.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 4e-14
6dbj|AK061960.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 4e-14
7dbj|AK058847.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 6e-07
8gb|BT012851.1| Lycopersicon esculentum clone 113930R, mRNA sequence 62 2e-06
9gb|AY360393.2| Oryza sativa (japonica cultivar-group) chromosome... 56 1e-04
10gb|BT016696.1| Zea mays clone Contig529 mRNA sequence 56 1e-04
11gb|BT017551.1| Zea mays clone EL01N0424D04.c mRNA sequence 56 1e-04
12gb|BT017416.1| Zea mays clone EL01N0401B11.c mRNA sequence 56 1e-04
13gb|AY360394.1| Oryza sativa (japonica cultivar-group) chromosome... 56 1e-04
14dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
15dbj|AP004458.2| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
16emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genom... 44 0.54
17gb|U84972.1|NTU84972 Nicotiana tabacum GUT15 mRNA, complete cds 44 0.54
18gb|U80955.3| Caenorhabditis elegans cosmid T04C9, complete sequence 42 2.1
19emb|CT009748.6| Mouse DNA sequence from clone RP23-120N6 on chro... 42 2.1
20gb|AC107635.16| Mus musculus chromosome 9, clone RP23-24C14, com... 42 2.1
21gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 2.1
22gb|AC137585.3| Mus musculus BAC clone RP23-355I23 from chromosom... 40 8.5
23emb|CR933475.1| Paramecium tetraurelia, Small GTPase ras, putati... 40 8.5
24ref|XM_759868.1| Theileria parva strain Muguga hypothetical prot... 40 8.5
25gb|AC159466.3| Mus musculus 10 BAC RP23-388A21 (Roswell Park Can... 40 8.5
26emb|AL450344.4| Human DNA sequence from clone RP11-136K14 on chr... 40 8.5
27emb|AL137073.13| Human DNA sequence from clone RP11-404F11 on ch... 40 8.5
28dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
29dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
30gb|AC153568.5| Mus musculus 10 BAC RP23-66K22 (Roswell Park Canc... 40 8.5
31dbj|AP006446.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
32dbj|AP004861.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
33emb|BX548043.5| Zebrafish DNA sequence from clone DKEY-81J8 in l... 40 8.5
34gb|U75694.1|STU75694 Solanum tuberosum SRE1b (sre1b) mRNA, compl... 40 8.5
35gb|U75693.1|STU75693 Solanum tuberosum SRE1a (sre1a) mRNA, compl... 40 8.5
36gb|AC101944.16| Mus musculus chromosome 1, clone RP24-118B6, com... 40 8.5 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                                   
Query: 140     atctcttagatctaataattatcgaaatatcatcgaataattatcaatacaa 191
               |||||||||||||||||||||||||||  |||||||||||||||||||||||
Sbjct: 6723159 atctcttagatctaataattatcgaaagttcatcgaataattatcaatacaa 6723108



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 39/40 (97%), Gaps = 1/40 (2%)
 Strand = Plus / Minus

                                                       
Query: 14      ggtggcctgcc-tgcgagcgcacccaacatggcaaaggcc 52
               ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 6723331 ggtggcctgccatgcgagcgcacccaacatggcaaaggcc 6723292



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/36 (94%), Gaps = 2/36 (5%)
 Strand = Plus / Minus

                                                   
Query: 94      cacaagcacctcgcttgttacatg--ctcttacctt 127
               ||||||||||||||||||||||||  ||||||||||
Sbjct: 6723232 cacaagcacctcgcttgttacatgttctcttacctt 6723197
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>gb|AC104473.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1626B05,
              complete sequence
          Length = 127946

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                                  
Query: 140    atctcttagatctaataattatcgaaatatcatcgaataattatcaatacaa 191
              |||||||||||||||||||||||||||  |||||||||||||||||||||||
Sbjct: 108707 atctcttagatctaataattatcgaaagttcatcgaataattatcaatacaa 108656



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 39/40 (97%), Gaps = 1/40 (2%)
 Strand = Plus / Minus

                                                      
Query: 14     ggtggcctgcc-tgcgagcgcacccaacatggcaaaggcc 52
              ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 108879 ggtggcctgccatgcgagcgcacccaacatggcaaaggcc 108840



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/36 (94%), Gaps = 2/36 (5%)
 Strand = Plus / Minus

                                                  
Query: 94     cacaagcacctcgcttgttacatg--ctcttacctt 127
              ||||||||||||||||||||||||  ||||||||||
Sbjct: 108780 cacaagcacctcgcttgttacatgttctcttacctt 108745
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                                   
Query: 140     atctcttagatctaataattatcgaaatatcatcgaataattatcaatacaa 191
               |||||||||||||||||||||||||||  |||||||||||||||||||||||
Sbjct: 6722372 atctcttagatctaataattatcgaaagttcatcgaataattatcaatacaa 6722321



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 39/40 (97%), Gaps = 1/40 (2%)
 Strand = Plus / Minus

                                                       
Query: 14      ggtggcctgcc-tgcgagcgcacccaacatggcaaaggcc 52
               ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 6722544 ggtggcctgccatgcgagcgcacccaacatggcaaaggcc 6722505



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/36 (94%), Gaps = 2/36 (5%)
 Strand = Plus / Minus

                                                   
Query: 94      cacaagcacctcgcttgttacatg--ctcttacctt 127
               ||||||||||||||||||||||||  ||||||||||
Sbjct: 6722445 cacaagcacctcgcttgttacatgttctcttacctt 6722410
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>dbj|AK103846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148J22, full
           insert sequence
          Length = 2465

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                               
Query: 140 atctcttagatctaataattatcgaaatatcatcgaataattatcaatacaa 191
           |||||||||||||||||||||||||||  |||||||||||||||||||||||
Sbjct: 480 atctcttagatctaataattatcgaaagttcatcgaataattatcaatacaa 429



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 39/40 (97%), Gaps = 1/40 (2%)
 Strand = Plus / Minus

                                                   
Query: 14  ggtggcctgcc-tgcgagcgcacccaacatggcaaaggcc 52
           ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 655 ggtggcctgccatgcgagcgcacccaacatggcaaaggcc 616



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/36 (94%), Gaps = 2/36 (5%)
 Strand = Plus / Minus

                                               
Query: 94  cacaagcacctcgcttgttacatg--ctcttacctt 127
           ||||||||||||||||||||||||  ||||||||||
Sbjct: 553 cacaagcacctcgcttgttacatgttctcttacctt 518
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>dbj|AK063571.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-G06, full
           insert sequence
          Length = 585

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                               
Query: 140 atctcttagatctaataattatcgaaatatcatcgaataattatcaatacaa 191
           |||||||||||||||||||||||||||  |||||||||||||||||||||||
Sbjct: 486 atctcttagatctaataattatcgaaagttcatcgaataattatcaatacaa 435



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/36 (94%), Gaps = 2/36 (5%)
 Strand = Plus / Minus

                                               
Query: 94  cacaagcacctcgcttgttacatg--ctcttacctt 127
           ||||||||||||||||||||||||  ||||||||||
Sbjct: 559 cacaagcacctcgcttgttacatgttctcttacctt 524
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>dbj|AK061960.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-G02, full
           insert sequence
          Length = 1385

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                               
Query: 140 atctcttagatctaataattatcgaaatatcatcgaataattatcaatacaa 191
           |||||||||||||||||||||||||||  |||||||||||||||||||||||
Sbjct: 486 atctcttagatctaataattatcgaaagttcatcgaataattatcaatacaa 435



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 39/40 (97%), Gaps = 1/40 (2%)
 Strand = Plus / Minus

                                                   
Query: 14  ggtggcctgcc-tgcgagcgcacccaacatggcaaaggcc 52
           ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 658 ggtggcctgccatgcgagcgcacccaacatggcaaaggcc 619



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/36 (94%), Gaps = 2/36 (5%)
 Strand = Plus / Minus

                                               
Query: 94  cacaagcacctcgcttgttacatg--ctcttacctt 127
           ||||||||||||||||||||||||  ||||||||||
Sbjct: 559 cacaagcacctcgcttgttacatgttctcttacctt 524
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>dbj|AK058847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-004-G07,
          full insert sequence
          Length = 695

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 39/40 (97%), Gaps = 1/40 (2%)
 Strand = Plus / Minus

                                                  
Query: 14 ggtggcctgcc-tgcgagcgcacccaacatggcaaaggcc 52
          ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 64 ggtggcctgccatgcgagcgcacccaacatggcaaaggcc 25
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>gb|BT012851.1| Lycopersicon esculentum clone 113930R, mRNA sequence
          Length = 2584

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 38/39 (97%), Gaps = 1/39 (2%)
 Strand = Plus / Minus

                                                  
Query: 16  tggcctgcc-tgcgagcgcacccaacatggcaaaggcct 53
           ||||||||| |||||||||||||||||||||||||||||
Sbjct: 698 tggcctgccatgcgagcgcacccaacatggcaaaggcct 660
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>gb|AY360393.2| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0096K16,
             complete sequence
          Length = 164501

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                         
Query: 26    gcgagcgcacccaacatggcaaaggcct 53
             ||||||||||||||||||||||||||||
Sbjct: 33503 gcgagcgcacccaacatggcaaaggcct 33476
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>gb|BT016696.1| Zea mays clone Contig529 mRNA sequence
          Length = 707

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 38/40 (95%), Gaps = 1/40 (2%)
 Strand = Plus / Minus

                                                   
Query: 16  tggcctgcc-tgcgagcgcacccaacatggcaaaggcctc 54
           ||||||||| |||||||||||||| |||||||||||||||
Sbjct: 634 tggcctgccatgcgagcgcacccatcatggcaaaggcctc 595
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>gb|BT017551.1| Zea mays clone EL01N0424D04.c mRNA sequence
          Length = 1171

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 38/40 (95%), Gaps = 1/40 (2%)
 Strand = Plus / Minus

                                                   
Query: 16  tggcctgcc-tgcgagcgcacccaacatggcaaaggcctc 54
           ||||||||| |||||||||||||| |||||||||||||||
Sbjct: 566 tggcctgccatgcgagcgcacccatcatggcaaaggcctc 527
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>gb|BT017416.1| Zea mays clone EL01N0401B11.c mRNA sequence
          Length = 1133

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 38/40 (95%), Gaps = 1/40 (2%)
 Strand = Plus / Minus

                                                   
Query: 16  tggcctgcc-tgcgagcgcacccaacatggcaaaggcctc 54
           ||||||||| |||||||||||||| |||||||||||||||
Sbjct: 565 tggcctgccatgcgagcgcacccatcatggcaaaggcctc 526
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>gb|AY360394.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0070J19,
             complete sequence
          Length = 158749

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                         
Query: 26    gcgagcgcacccaacatggcaaaggcct 53
             ||||||||||||||||||||||||||||
Sbjct: 29740 gcgagcgcacccaacatggcaaaggcct 29767
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                            
Query: 26       gcgagcgcacccaacatggcaaaggcct 53
                ||||||||||||||||||||||||||||
Sbjct: 12364091 gcgagcgcacccaacatggcaaaggcct 12364064
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>dbj|AP004458.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0045D08
          Length = 160541

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                          
Query: 26     gcgagcgcacccaacatggcaaaggcct 53
              ||||||||||||||||||||||||||||
Sbjct: 122740 gcgagcgcacccaacatggcaaaggcct 122713
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>emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genome; segment 8/16
          Length = 349640

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 258    cgccgccgcgccagctcgagaccgcc 283
              |||||||||||| |||||||||||||
Sbjct: 139675 cgccgccgcgcccgctcgagaccgcc 139650
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>gb|U84972.1|NTU84972 Nicotiana tabacum GUT15 mRNA, complete cds
          Length = 1670

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 25  tgcgagcgcacccaacatggcaaagg 50
           |||||||||||||| |||||||||||
Sbjct: 623 tgcgagcgcacccatcatggcaaagg 598
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>gb|U80955.3| Caenorhabditis elegans cosmid T04C9, complete sequence
          Length = 34791

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 156   aattatcgaaatatcatcgaa 176
             |||||||||||||||||||||
Sbjct: 23692 aattatcgaaatatcatcgaa 23712
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>emb|CT009748.6| Mouse DNA sequence from clone RP23-120N6 on chromosome 9, complete
             sequence
          Length = 235839

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 524   actggaggccaggaggctggatcta 548
             |||||||||||| ||||||||||||
Sbjct: 79204 actggaggccagcaggctggatcta 79180
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>gb|AC107635.16| Mus musculus chromosome 9, clone RP23-24C14, complete sequence
          Length = 214285

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 524   actggaggccaggaggctggatcta 548
             |||||||||||| ||||||||||||
Sbjct: 16004 actggaggccagcaggctggatcta 16028
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 255     gcccgccgccgcgccagctcg 275
               |||||||||||||||||||||
Sbjct: 1105618 gcccgccgccgcgccagctcg 1105598
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>gb|AC137585.3| Mus musculus BAC clone RP23-355I23 from chromosome 18, complete sequence
          Length = 216041

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 532    ccaggaggctggatctagag 551
              ||||||||||||||||||||
Sbjct: 106344 ccaggaggctggatctagag 106363
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>emb|CR933475.1| Paramecium tetraurelia, Small GTPase ras, putative, complete gene
          Length = 3001

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 142  ctcttagatctaataattat 161
            ||||||||||||||||||||
Sbjct: 2054 ctcttagatctaataattat 2073
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>ref|XM_759868.1| Theileria parva strain Muguga hypothetical protein (TP02_0395)
           partial mRNA
          Length = 1401

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 142 ctcttagatctaataattat 161
           ||||||||||||||||||||
Sbjct: 254 ctcttagatctaataattat 235
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>gb|AC159466.3| Mus musculus 10 BAC RP23-388A21 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 190140

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 307   agcatcaaatcagcaacaga 326
             ||||||||||||||||||||
Sbjct: 56519 agcatcaaatcagcaacaga 56500
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>emb|AL450344.4| Human DNA sequence from clone RP11-136K14 on chromosome 6 Contains
             three novel genes, the 5' end of a novel gene (contains
             FLJ31738 and KIAA1209) and a CpG island, complete sequence
          Length = 150005

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    tcccctcaccacaagcacct 104
             ||||||||||||||||||||
Sbjct: 64390 tcccctcaccacaagcacct 64409
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>emb|AL137073.13| Human DNA sequence from clone RP11-404F11 on chromosome 9p23-24.1
              Contains a novel gene encoding a protein similar to
              bacterial N-acetylneuraminic acid condensing enzyme (NEUB)
              and 3' end of the TBCID2 gene, a TRIM14 gene encoding
              tripartite motif-containing 14 (KIAA0129), the CORO2A gene
              encoding Coronin 2A (actin-binding protein), TBC1D2 gene
              encoding TBC1 domain family, member 2 (PARIS1,
              PARIS-1,DKFZP761D1823, DKFZp761D1823), and 4 CpG islands,
              complete sequence
          Length = 201300

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 484    cctcaccttgcccagggatc 503
              ||||||||||||||||||||
Sbjct: 160765 cctcaccttgcccagggatc 160784
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 498     gggatcgaagcggattcgat 517
               ||||||||||||||||||||
Sbjct: 4713519 gggatcgaagcggattcgat 4713500
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 498      gggatcgaagcggattcgat 517
                ||||||||||||||||||||
Sbjct: 18437731 gggatcgaagcggattcgat 18437712
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>gb|AC153568.5| Mus musculus 10 BAC RP23-66K22 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 186215

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 307    agcatcaaatcagcaacaga 326
              ||||||||||||||||||||
Sbjct: 169540 agcatcaaatcagcaacaga 169521
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>dbj|AP006446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1097H10
          Length = 159732

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 498   gggatcgaagcggattcgat 517
             ||||||||||||||||||||
Sbjct: 31123 gggatcgaagcggattcgat 31104
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>dbj|AP004861.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0001A11
          Length = 153252

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 498    gggatcgaagcggattcgat 517
              ||||||||||||||||||||
Sbjct: 100655 gggatcgaagcggattcgat 100636
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>emb|BX548043.5| Zebrafish DNA sequence from clone DKEY-81J8 in linkage group 10, complete
              sequence
          Length = 156034

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 43     ggcaaaggcctctagatgtt 62
              ||||||||||||||||||||
Sbjct: 127000 ggcaaaggcctctagatgtt 127019
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>gb|U75694.1|STU75694 Solanum tuberosum SRE1b (sre1b) mRNA, complete cds
          Length = 2467

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 25  tgcgagcgcacccaacatggcaaaggcc 52
           |||||||||||||  |||||||||||||
Sbjct: 712 tgcgagcgcacccggcatggcaaaggcc 685
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>gb|U75693.1|STU75693 Solanum tuberosum SRE1a (sre1a) mRNA, complete cds
          Length = 2060

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 25  tgcgagcgcacccaacatggcaaaggcc 52
           |||||||||||||  |||||||||||||
Sbjct: 724 tgcgagcgcacccgtcatggcaaaggcc 697
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>gb|AC101944.16| Mus musculus chromosome 1, clone RP24-118B6, complete sequence
          Length = 174560

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 526    tggaggccaggaggctggatctag 549
              |||||||| |||||||||||||||
Sbjct: 107794 tggaggcccggaggctggatctag 107771


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,130,336
Number of Sequences: 3902068
Number of extensions: 4130336
Number of successful extensions: 77882
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77366
Number of HSP's gapped (non-prelim): 516
length of query: 622
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 599
effective length of database: 17,143,297,704
effective search space: 10268835324696
effective search space used: 10268835324696
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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