ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd27d09 |
|---|---|
| Clone Library Name | barley_pub |
>KEFC_KLEAE (Q9X756) Glutathione-regulated potassium-efflux system protein kefC| (K(+)/H(+) antiporter) Length = 621 Score = 40.4 bits (93), Expect = 0.006 Identities = 30/126 (23%), Positives = 53/126 (42%), Gaps = 3/126 (2%) Frame = -3 Query: 730 ERACAAAITLDTPGANYRAVWALSKYFPNVKTFVRAHDVDHGVNLEKAGASAVVPETLEP 551 E+A +D P + V + ++FP+++ RA DVDH + L +AG A ET E Sbjct: 462 EKAEVLINAIDDPHVSLELVARVKEHFPHLQIISRARDVDHYIQLRQAGVEAPERETFEA 521 Query: 550 SXXXXXXXXXXXXLPMSEIATTINEFRNRHLSELTELCSTSGSSLGYG---FSRVMSKTK 380 + L E + FR +L + E+ + + + G F R Sbjct: 522 ALKSGRMTLEALGLGAYEARERPDLFRRFNLQMVEEMVAMAENDPRRGVAVFKRTSDMLT 581 Query: 379 PLVSDD 362 ++++D Sbjct: 582 GIINED 587
>KEFC_SHIFL (Q83SQ3) Glutathione-regulated potassium-efflux system protein kefC| (K(+)/H(+) antiporter) Length = 620 Score = 38.5 bits (88), Expect = 0.022 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = -3 Query: 703 LDTPGANYRAVWALSKYFPNVKTFVRAHDVDHGVNLEKAGASAVVPETLE 554 +D P N + + ++FP+++ RA DVDH + L +AG ET E Sbjct: 471 IDDPQTNLQLTEMVKEHFPHLQIIARARDVDHYIRLRQAGVEKPERETFE 520
>KEFC_ECOLI (P03819) Glutathione-regulated potassium-efflux system protein kefC| (K(+)/H(+) antiporter) Length = 620 Score = 38.5 bits (88), Expect = 0.022 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = -3 Query: 703 LDTPGANYRAVWALSKYFPNVKTFVRAHDVDHGVNLEKAGASAVVPETLE 554 +D P N + + ++FP+++ RA DVDH + L +AG ET E Sbjct: 471 IDDPQTNLQLTEMVKEHFPHLQIIARARDVDHYIRLRQAGVEKPERETFE 520
>KEFC_ECOL6 (Q8FLA1) Glutathione-regulated potassium-efflux system protein kefC| (K(+)/H(+) antiporter) Length = 620 Score = 38.5 bits (88), Expect = 0.022 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = -3 Query: 703 LDTPGANYRAVWALSKYFPNVKTFVRAHDVDHGVNLEKAGASAVVPETLE 554 +D P N + + ++FP+++ RA DVDH + L +AG ET E Sbjct: 471 IDDPQTNLQLTEMVKEHFPHLQIIARARDVDHYIRLRQAGVEKPERETFE 520
>KEFC_SALTY (Q8ZRW2) Glutathione-regulated potassium-efflux system protein kefC| (K(+)/H(+) antiporter) Length = 620 Score = 37.7 bits (86), Expect = 0.037 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = -3 Query: 703 LDTPGANYRAVWALSKYFPNVKTFVRAHDVDHGVNLEKAGASAVVPETLE 554 +D P N + + +FP+++ RA DVDH + L +AG + ET E Sbjct: 471 IDDPQTNLQLSELVKSHFPHLQIIARARDVDHYIRLRQAGVAMPERETFE 520
>KEFC_SALPA (Q5PIL3) Glutathione-regulated potassium-efflux system protein kefC| (K(+)/H(+) antiporter) Length = 620 Score = 37.7 bits (86), Expect = 0.037 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = -3 Query: 703 LDTPGANYRAVWALSKYFPNVKTFVRAHDVDHGVNLEKAGASAVVPETLE 554 +D P N + + +FP+++ RA DVDH + L +AG + ET E Sbjct: 471 IDDPQTNLQLSELVKSHFPHLQIIARARDVDHYIRLRQAGVAMPERETFE 520
>KEFC_SALTI (Q8Z9K0) Glutathione-regulated potassium-efflux system protein kefC| (K(+)/H(+) antiporter) Length = 620 Score = 37.4 bits (85), Expect = 0.048 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = -3 Query: 703 LDTPGANYRAVWALSKYFPNVKTFVRAHDVDHGVNLEKAGASAVVPETLE 554 +D P N + + +FP+++ RA DVDH + L +AG + ET E Sbjct: 471 IDDPQTNLQLSELVKTHFPHLQIIARARDVDHYIRLRQAGVAMPERETFE 520
>KEFC_ECO57 (Q8XA20) Glutathione-regulated potassium-efflux system protein kefC| (K(+)/H(+) antiporter) Length = 620 Score = 37.4 bits (85), Expect = 0.048 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = -3 Query: 703 LDTPGANYRAVWALSKYFPNVKTFVRAHDVDHGVNLEKAGASAVVPETLE 554 +D P N + + ++FP+++ RA DVDH + L +AG ET E Sbjct: 471 IDDPQTNLQLTEMVKEHFPHLQIIARARDVDHYICLRQAGVEKPERETFE 520
>CYB_CAEEL (P24890) Cytochrome b| Length = 370 Score = 35.0 bits (79), Expect = 0.24 Identities = 18/44 (40%), Positives = 25/44 (56%) Frame = -2 Query: 209 FQLFHFGMVGHLFLFSSKPWLLLFCFQPLYFPSSRRWKIWLSGL 78 F++FHF F+F L L F+ L+F S R K+W+SGL Sbjct: 76 FRIFHFNGASLFFIF-----LYLHIFKGLFFMSYRLKKVWMSGL 114
>CYB_CAEBR (Q8HEC2) Cytochrome b| Length = 370 Score = 34.3 bits (77), Expect = 0.41 Identities = 18/44 (40%), Positives = 24/44 (54%) Frame = -2 Query: 209 FQLFHFGMVGHLFLFSSKPWLLLFCFQPLYFPSSRRWKIWLSGL 78 F++FHF F+F L L F L+F S R K+W+SGL Sbjct: 76 FRIFHFNGASLFFIF-----LYLHIFTGLFFMSYRLKKVWMSGL 114
>CYB_ASCSU (P24878) Cytochrome b| Length = 365 Score = 31.2 bits (69), Expect = 3.5 Identities = 16/44 (36%), Positives = 24/44 (54%) Frame = -2 Query: 209 FQLFHFGMVGHLFLFSSKPWLLLFCFQPLYFPSSRRWKIWLSGL 78 F++ HF F+F L L F+ L+F S R K+W+SG+ Sbjct: 71 FRVLHFNGASLFFIF-----LYLHLFKGLFFMSYRLKKVWVSGI 109
>CCD37_MOUSE (Q80VN0) Coiled-coil domain-containing protein 37| Length = 459 Score = 30.8 bits (68), Expect = 4.5 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 8/56 (14%) Frame = +2 Query: 83 LTAKSSTVYLTGSKGAGNRKEEAMVWKR--------KETNVLPYQNGRAEMLPKIG 226 LT +ST L G KG+G++ + A +WK K ++ + + LP++G Sbjct: 140 LTRNNSTAILFGDKGSGSKSKTAFLWKEVPGLKKVTKTGRLVKALSSSIQSLPQVG 195
>GEMI5_HUMAN (Q8TEQ6) Gem-associated protein 5 (Gemin5)| Length = 1508 Score = 30.4 bits (67), Expect = 5.9 Identities = 28/96 (29%), Positives = 37/96 (38%), Gaps = 4/96 (4%) Frame = -3 Query: 691 GANYRAVWALSKYFPNVKTFVRAH----DVDHGVNLEKAGASAVVPETLEPSXXXXXXXX 524 G Y W+LS+ PN +VRA V+ L+ A PET +P Sbjct: 1283 GRLYEFWWSLSRPCPNSSVWVRAGHRTLSVEPSQQLDTASTEETDPETSQPEPNR----- 1337 Query: 523 XXXXLPMSEIATTINEFRNRHLSELTELCSTSGSSL 416 SE+ + E R LS EL S +SL Sbjct: 1338 ------PSELDLRLTEEGERMLSTFKELFSEKHASL 1367
>LPXB_RICPR (Q9ZDK7) Lipid-A-disaccharide synthase (EC 2.4.1.182)| Length = 380 Score = 30.4 bits (67), Expect = 5.9 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 6/46 (13%) Frame = -3 Query: 709 ITLDTPGANYRAVWALSKYFPNVKTF------VRAHDVDHGVNLEK 590 IT+D+PG YR + K PN+K V A+ D VN K Sbjct: 90 ITIDSPGFTYRVAKRVRKLLPNLKMIHIVAPSVWAYKADRAVNYAK 135 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 110,473,928 Number of Sequences: 219361 Number of extensions: 2373108 Number of successful extensions: 6604 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 6360 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6603 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7592921998 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
